Metagenome / Metatranscriptome Family F101455

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101455
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	71 residues
Representative Sequence	AEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (43.137 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122 1TB_LI09_4DRAFT_101775311 2JGIcombinedJ13530_1070551651 3JGIcombinedJ13530_1071912992 4Ga0055462_103278792 5Ga0062590_1005578622 6Ga0062382_100223451 7Ga0066388_1024719792 8Ga0070692_109631212 9Ga0068854_1005508031 10Ga0075422_102660152 11Ga0079037_1002855931 12Ga0079037_1024483561 13Ga0074057_102309801 14Ga0075428_1004101481 15Ga0075428_1014499701 16Ga0075433_117457211 17Ga0105093_105987801 18Ga0105090_104513232 19Ga0105106_104091022 20Ga0105107_109435762 21Ga0102851_125229711 22Ga0115026_103825721 23Ga0115026_111756141 24Ga0115027_108681601 25Ga0105100_107620482 26Ga0105101_105554512 27Ga0130016_103107852 28Ga0134121_130031582 29Ga0137458_11336912 30Ga0153916_130949962 31Ga0173609_105592082 32Ga0075305_10709442 33Ga0075340_11558561 34Ga0075355_12309802 35Ga0157380_129681292 36Ga0180061_10521762 37Ga0180063_12926812 38Ga0180081_10480011 39Ga0132258_103782305 40Ga0132256_1035244401 41Ga0184633_104606702 42Ga0184628_105207912 43Ga0210377_104145891 44Ga0209519_107711242 45Ga0209640_101919703 46Ga0209341_112810842 47Ga0209342_107378332 48Ga0210126_1138421 49Ga0210117_10077401 50Ga0209593_102437742 51Ga0208980_101970493 52Ga0209253_100820824 53Ga0209705_103409531 54Ga0311365_108395961 55Ga0311360_115017192 56Ga0299915_107892111 57Ga0307468_1018835502 58Ga0318552_102031063 59Ga0318497_106936882 60Ga0315290_105114291 61Ga0315297_105897692 62Ga0315297_110313712 63Ga0315297_114747811 64Ga0310900_115966671 65Ga0310885_102462682 66Ga0315278_119108841 67Ga0315278_119346461 68Ga0310895_104957971 69Ga0310895_107732662 70Ga0315292_105901022 71Ga0315292_106002712 72Ga0315292_109946111 73Ga0315292_115648381 74Ga0315283_114962901 75Ga0315283_122913832 76Ga0310812_105394662 77Ga0315273_108886362 78Ga0315273_126450272 79Ga0335085_121860821 80Ga0335084_110363171 81Ga0316604_102058471 82Ga0316605_105563092 83Ga0316605_114748591 84Ga0316622_1014242262 85Ga0316622_1017307392 86Ga0316622_1021663432 87Ga0316625_1015581581 88Ga0316601_1016018502 89Ga0316601_1017556502 90Ga0326726_113259752 91Ga0316620_109294412 92Ga0316627_1007381613 93Ga0316627_1014794831 94Ga0316629_110628172 95Ga0299912_101322791 96Ga0299912_101803763 97Ga0299912_103505113 98Ga0316628_1005442932 99Ga0316616_1013968741 100Ga0373899_009296_2_238 101Ga0364942_0187129_497_676 102Ga0364932_0053469_1306_1521
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122 1TB_LI09_4DRAFT_101775311 2JGIcombinedJ13530_1070551651 3JGIcombinedJ13530_1071912992 4Ga0062590_1005578622 5Ga0066388_1024719792 6Ga0068854_1005508031 7Ga0075422_102660152 8Ga0079037_1002855931 9Ga0079037_1024483561 10Ga0105093_105987801 11Ga0105107_109435762 12Ga0105100_107620482 13Ga0153916_130949962 14Ga0075355_12309802 15Ga0210126_1138421 16Ga0307468_1018835502 17Ga0335084_110363171 18Ga0316601_1016018502
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0180081_10480011 2TB_LI09_4DRAFT_101775311 3JGIcombinedJ13530_1070551651 4JGIcombinedJ13530_1071912992 5Ga0066388_1024719792 6Ga0105107_109435762 7Ga0130016_103107852 8Ga0134121_130031582 9Ga0153916_130949962 10Ga0075305_10709442 11Ga0132256_1035244401 12Ga0210117_10077401 13Ga0209593_102437742 14Ga0208980_101970493 15Ga0335085_121860821 16Ga0316622_1014242262 17Ga0316629_110628172 18Ga0299912_101322791 19Ga0373899_009296_2_238
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.00% β-sheet: 0.00% Coil/Unstructured: 46.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d1nzna1	1nzn	0.78327
a.118.8.1: Tetratricopeptide repeat (TPR)	d1w3ba_	1w3b	0.76994
a.118.8.6: SusD-like	d3ckca_	3ckc	0.76697
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d3txna1	3txn	0.76214
a.118.8.1: Tetratricopeptide repeat (TPR)	d2vyia_	2vyi	0.76034

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04909	Amidohydro_2	22.55
PF00795	CN_hydrolase	8.82
PF16116	DUF4832	3.92
PF01182	Glucosamine_iso	2.94
PF01048	PNP_UDP_1	2.94
PF07676	PD40	1.96
PF08279	HTH_11	0.98
PF01996	F420_ligase	0.98
PF03109	ABC1	0.98
PF01967	MoaC	0.98

Showing 1 to 10 of 11 entries

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COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	2.94
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	2.94
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	2.94
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	2.94
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.98
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.98
COG1478	F420-0:Gamma-glutamyl ligase (F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.33 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
Unclassified	root	N/A	66.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Candidatus Glassbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Glassbacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Candidatus Glassbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Glassbacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Glassbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Glassbacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Glassbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Glassbacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Glassbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Glassbacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Unclassified	root	N/A	66.67 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.98 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000231\|TB_LI09_4DRAFT_10177531	Not Available	704	Open in IMG/M
3300001213\|JGIcombinedJ13530_107055165	Not Available	600	Open in IMG/M
3300001213\|JGIcombinedJ13530_107191299	Not Available	875	Open in IMG/M
3300004015\|Ga0055462_10327879	Not Available	507	Open in IMG/M
3300004157\|Ga0062590_100557862	Not Available	994	Open in IMG/M
3300004782\|Ga0062382_10022345	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300005332\|Ga0066388_102471979	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005345\|Ga0070692_10963121	Not Available	594	Open in IMG/M
3300005578\|Ga0068854_100550803	Not Available	978	Open in IMG/M
3300006196\|Ga0075422_10266015	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M

Showing 1 to 10 of 102 entries

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Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	2.94%
Environmental	Environmental	89.22%
Host-Associated	Host-Associated	7.84%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	44.12%
Bioremediation	Engineered → Bioremediation	0.98%
Plants	Host-Associated → Plants	7.84%
Terrestrial	Environmental → Terrestrial	45.10%
Wastewater	Engineered → Wastewater	1.96%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.98%
Floodplain	Environmental → Terrestrial → Floodplain	1.96%
Freshwater	Environmental → Aquatic → Freshwater	32.35%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.98%
Marine	Environmental → Aquatic → Marine	5.88%
Metal	Engineered → Bioremediation → Metal	0.98%
Peat	Environmental → Terrestrial → Peat	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Sediment	Environmental → Aquatic → Sediment	5.88%
Soil	Environmental → Terrestrial → Soil	40.20%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	13.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.98%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.90%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.73%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.98%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.98%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.94%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.84%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.96%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.98%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	16.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.98%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.94%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.98%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 82 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_4DRAFT_101775311	3300000231	Groundwater	AGRDFRQTALAHRAAQRLGEASDAEWRPRLEAALGEADTYLFRGGHYPAVATAARGMLLRALGRVAEGAAALREVIVLPDRALAHHIARRALQEP*
JGIcombinedJ13530_1070551651	3300001213	Wetland	ADLYLFRGGHYPAVATGARGLLLRALGRTREGDEALRQVFVLPDKGMAHHVARLALHPGP
JGIcombinedJ13530_1071912992	3300001213	Wetland	AGDAQWRPRLEAALVEAELYLFRGGHYPAGATLARGMLLRALGRVAEGNEALRQVFVLPDKGMPHHIARVALQEP*
Ga0055462_103278792	3300004015	Natural And Restored Wetlands	EWPRRLETALGEADLYLFRGGHYPAVATCARGMLLRALGRKAEGEAALRQVFVLPDKGMPHHIARRALGER*
Ga0062590_1005578622	3300004157	Soil	DLRQAAFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKAAEGDEALRQVFTLPDKGMPHHMARLALEER*
Ga0062382_100223451	3300004782	Wetland Sediment	SEAEWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRSLGRAPEGDEALRQVFVLPDQGLPHHIARLALQEP*
Ga0066388_1024719792	3300005332	Tropical Forest Soil	FRGGHYPALATAARGLALRALGRATEGEAALRQVFTLPDKGMAHEIARLALQEPEAAARP
Ga0070692_109631212	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RDLRQAAFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEGDEALRQVFTLPDKGMPHHMARLALEER*
Ga0068854_1005508031	3300005578	Corn Rhizosphere	AEADLYLFRGGHYPALATAARGLLLRALGRTREGDEALRQVFLLPDKGMPHHIARLALEDAQGVSRSRSTLTR*
Ga0075422_102660152	3300006196	Populus Rhizosphere	LGAANEAEWRPRLEAALAEADLYLFRGGHYPAVATAARGLILRALRRGREGDEALRQVFLLPDKGMPHHIARLALAGGRMEE*
Ga0079037_1002855931	3300006224	Freshwater Wetlands	PAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP*
Ga0079037_1024483561	3300006224	Freshwater Wetlands	ALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP*
Ga0074057_102309801	3300006605	Soil	AEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER*
Ga0075428_1004101481	3300006844	Populus Rhizosphere	EADLYLFRGGHYPAVATCARGMLLRALGRTSEGNETLRQVFVLPDKGMPHHIARLALQEQ
Ga0075428_1014499701	3300006844	Populus Rhizosphere	ALAEADLYLFRGGHYPAVATAARGLILRALRRGREGDEALRQVFLLPDKGMPHHIARLALSGGRMEE*
Ga0075433_117457211	3300006852	Populus Rhizosphere	AEADLYLFRGGHYPAVATAARGLLLRALGRGREGDEALRHVFLLPDKGMPHHIARLALAGGRMEE*
Ga0105093_105987801	3300009037	Freshwater Sediment	DTYLFRGGHYPALATAARGMLLRVLGRAAEGDAALREVIVLPDRALAHHIARLALQEP*
Ga0105090_104513232	3300009075	Freshwater Sediment	EADLYLFRGGHYPAGATAARGMLLRALGRGPEGEQALRQVFVLPDKGLAHHIARLAL*
Ga0105106_104091022	3300009078	Freshwater Sediment	AVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP*
Ga0105107_109435762	3300009087	Freshwater Sediment	HRAALRLGEATDAEWRPRLESALAEADLYLFRGGHYPAVATCARGMLLSALGRRSDGDEVLRRVFVLPDKGMPHHMARLGLEEPL*
Ga0102851_125229711	3300009091	Freshwater Wetlands	QKLGEASEVEWRPRLETALAEAETYLFRGGHYPAVATCARGLLLRALGRTREGEEALRQVFVLPDKGMPHHIARLALQEP*
Ga0115026_103825721	3300009111	Wetland	RSAQKLGEASEAEWRPRLETALAEAETYLFRGGHYPAVATCARGLLLRALGRTREGEEALRQVFVLPDKGMPHHIARLALQEP*
Ga0115026_111756141	3300009111	Wetland	RLQAALEEADTYLFRGGHYPALATCSRGMLLRALGRGPEGDEALRQVFVLPDKGLPHHIARLALQEP*
Ga0115027_108681601	3300009131	Wetland	PRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP*
Ga0105100_107620482	3300009166	Freshwater Sediment	DLYLFRGGHYPAVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP*
Ga0105101_105554512	3300009171	Freshwater Sediment	QKLGTANEAEWRPRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP*
Ga0130016_103107852	3300009868	Wastewater	RQSAFAYRAAQRLGEASDAEWRPRLQAALDEADTYLFRGGHYPALATAARGMLLRALGRVAEGDAALREVIVLPDRALAHHIARLALEGR*
Ga0134121_130031582	3300010401	Terrestrial Soil	DHAEWRPRLEAALAEADLYLFRGGHYPALATAARGLLLRALGRTGEGDEALRQVFLLPDKGMPHHIARLGLEEAQGVSRSRSTPTR*
Ga0137458_11336912	3300011436	Soil	AFAYRAAQRLGEASEPAWRPRLETALAEADLYLFRGGHYPAGATCARGMLLRALGRIPEGDEALRQAFVLPDKGMPHHIARLALQEP*
Ga0153916_130949962	3300012964	Freshwater Wetlands	AAQKLGQAGESEWRPRLEAALVEADLYLFRGGHYPAVATCARGMLLRALGRTSESDEALRQAFVLPDKGMPHHIARLALENR*
Ga0173609_105592082	3300013315	Sediment	LYLFRGGHYPAGATGARGMLLRALGRGPEGEDALRQVFVLPDKGLPHHIARLALQEP*
Ga0075305_10709442	3300014295	Natural And Restored Wetlands	ERLGQATDPEWSRRLETALGEADLYLFRGGHYPAVATCARGMLLRALGRKAEGEAALRQVFVLPDKGMPHHIARLALGER*
Ga0075340_11558561	3300014304	Natural And Restored Wetlands	TDAEWPRRLETALAEANLYLFRGGHYPAVATCARGMLLRALGRIAEGEAALRQVFVLPDKGMPHHIARLALGER*
Ga0075355_12309802	3300014322	Natural And Restored Wetlands	AQWRPRLETALGEADLYLFRGGHYPAGATCARGMLLRALGRVPEGNEALRQVFVLPDKGMPHHVARLALEEPHGGGEPRPRGDAPGGE*
Ga0157380_129681292	3300014326	Switchgrass Rhizosphere	EWRPRLEAALAEADLYLFRGGHYPALATAARGLLLRALGRTREGDEALRQVFLLPDKGMPHHIARLELEDAQGVSRSRSTPTR*
Ga0180061_10521762	3300014861	Soil	AAQKLGTANEAEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP*
Ga0180063_12926812	3300014885	Soil	WRPRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP*
Ga0180081_10480011	3300015253	Soil	AEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP*
Ga0132258_103782305	3300015371	Arabidopsis Rhizosphere	GEASDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDKALRQVFTLPDKGMPHHMARLALEER*
Ga0132256_1035244401	3300015372	Arabidopsis Rhizosphere	EASDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDKALRQVFTLPDKGMPHHMARLALEER*
Ga0184633_104606702	3300018077	Groundwater Sediment	PRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRTKEGDEALRQVFVLPDKGLPHHIARLALQEPQ
Ga0184628_105207912	3300018083	Groundwater Sediment	AQRLGDASESEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER
Ga0210377_104145891	3300021090	Groundwater Sediment	ETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPESDEALRQVFVLPDKGLPHHVARLALQEQ
Ga0209519_107711242	3300025318	Soil	YLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ
Ga0209640_101919703	3300025324	Soil	YRAAQRLGEASDPTWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ
Ga0209341_112810842	3300025325	Soil	PAWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDEALRQVFVLPDKGMPHHIARIALQEPQ
Ga0209342_107378332	3300025326	Soil	ETALAEADLYLFRGGHYPAVATCARGMLLRALGRTAEGDLALRQVFVLPDKGMPHHIARIALQEPQ
Ga0210126_1138421	3300025946	Natural And Restored Wetlands	LFRGGHYPAVATCARGMLLRALGRNAEAEAALRQVFVLPDKGMPHHIARLALQQP
Ga0210117_10077401	3300025985	Natural And Restored Wetlands	DTYLFRGGHYPGVATCARGMLLRALGRTSEGDLALRSVFTLPDKGMPHHVARLALHELLEAAPAP
Ga0209593_102437742	3300027743	Freshwater Sediment	AYRAAQRLGEATDAAWRPRLEAALAEADLYLFRGGHYPAVATNARGLLLRALGRVREGEDALRQVFVLPDKGMPHHMARLALQER
Ga0208980_101970493	3300027887	Wetland	RSAQRLGEASDAEWQPRLQAALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0209253_100820824	3300027900	Freshwater Lake Sediment	RGGHYPAGATCARGMLLRALGRIPESDEALRQVFILPDKGMPHHIARLALQEP
Ga0209705_103409531	3300027979	Freshwater Sediment	RLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRSPEGDEALRRVFVLPDKGMPHHIARLALEEAVEGGTP
Ga0311365_108395961	3300029989	Fen	YLFRGGHYPAGATCARGMLLRALGRTREGDEALRQVFVLPDKGMPHHIARLALAEADKTP
Ga0311360_115017192	3300030339	Bog	LFRGGHYPAGATCARGMLLRALGRTREGDEALRQVFVLPDKGMPHHIARLALAEADKTP
Ga0299915_107892111	3300030613	Soil	GEASDAEWRPRLGSALAEAELYLFRGGHYPAIAMCARGMLLRALGRRSEGDEVLRRVFVLPDKGMPHHMARLGLEEPL
Ga0307468_1018835502	3300031740	Hardwood Forest Soil	AEWRPRLQAALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEADESLRQVFTLPDKGMPHHMARLALEER
Ga0318552_102031063	3300031782	Soil	YLFRGGHYPGLATCSRGLLLRALGRTAEADEALRQVFTLPDKGLPHHMARLALQEP
Ga0318497_106936882	3300031805	Soil	ADTYLFRGGHYPGLATCSRGLLLRALGRTAEADEALRQVFTLPDKGLPHHMARLALQEP
Ga0315290_105114291	3300031834	Sediment	ETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0315297_105897692	3300031873	Sediment	AAKGRDFRQAAFAYRAAQRLGEANDADWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRALGRTAEADEALRQVFVLPDKGMPHHIARLALQEP
Ga0315297_110313712	3300031873	Sediment	PRLETALAEADTYLFRGGHYPAVATSARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0315297_114747811	3300031873	Sediment	AGHDFRQTAFAYRAAQRLGEASEAEWRPRLETALAEADTYLFRGGHYPAVATSARGMLLRALGRVPEGNESLRQVFVLPDKGLPHHIARLALQEP
Ga0310900_115966671	3300031908	Soil	EAALAEADLYLFRGGHYPALATAARGLLLRALGRAQEGDEALRQVFLLPDKGMPHHIARLALEEAQGVSRSRSTPTR
Ga0310885_102462682	3300031943	Soil	ALAEADTYLFRGGHYPALATLGRGMLLRALGKTAEGGESLRQVFTLPDKGMPHHMARLALEER
Ga0315278_119108841	3300031997	Sediment	RPRLETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0315278_119346461	3300031997	Sediment	QKLGEADDGAWRPRLEAALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0310895_104957971	3300032122	Soil	DAEWRPRLEAALAEADTYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEER
Ga0310895_107732662	3300032122	Soil	QAAFAYRAAQRLGEASDAEWRPRLEAALAEAETYLFRGGHYPALATLGRGLLLRALGRTAEGDEALRQVFTLPDKGMPHHMARLALEEH
Ga0315292_105901022	3300032143	Sediment	EASEAEWRPRLETALAEADLYLFRGGHYPAGATCARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0315292_106002712	3300032143	Sediment	LAEADTYLFRGGHYPAVATSARGMLLRALGRIPEGDLALRQVFVLPDKGMPHHIARLALQEP
Ga0315292_109946111	3300032143	Sediment	RPRLETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0315292_115648381	3300032143	Sediment	ADTYLFRGGHYPAVATSARGMLLRALGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0315283_114962901	3300032164	Sediment	LETALAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0315283_122913832	3300032164	Sediment	LAEADLYLFRGGHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0310812_105394662	3300032421	Soil	AFAYRAAQRLGEATDAEWRPRLEAALAEADTYLFRGGHYPALATLGRGMLLRALGKAAEGDEALRQVFTLPDKGMPHHMARLALEER
Ga0315273_108886362	3300032516	Sediment	LYLFRGGHYPAGATCARGMLLRSLGRVSEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0315273_126450272	3300032516	Sediment	GHYPAGATCARGMLLRSLGRVPEGNEALRQVFVLPDKGLPHHIARLALQEP
Ga0335085_121860821	3300032770	Soil	DANEAVWRPRLEAALAEADTYLFRGGHYPGLATCSRGLLLRALGRAAEADEALRQVFTLPDKGLPHHMARLALQER
Ga0335084_110363171	3300033004	Soil	GGHCPALATCARGMLLRALGRTSEADEALRHVFLLPDKGMPHHMARLALDTR
Ga0316604_102058471	3300033406	Soil	HAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR
Ga0316605_105563092	3300033408	Soil	DFRQAAFAYRSAQRLGEASDAEWRPRLHAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR
Ga0316605_114748591	3300033408	Soil	AEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLE
Ga0316622_1014242262	3300033416	Soil	PRLEAALAEAETYLFRGGHYPAVATCARGLLLRAVGRTHEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0316622_1017307392	3300033416	Soil	FAYRSAQRLGGASDAEWRPRLQAALDEADTYLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0316622_1021663432	3300033416	Soil	RGGHYPAVATCARGMLLRALGRVPEGDESLRQVFVLPDKGLPHHIARLALQEQ
Ga0316625_1015581581	3300033418	Soil	GRLETALAEADLYLFRGGHYPAVATCARGLLLRALGRTSEGDEALRQVFTLPDKGMPHHIARLALQEQ
Ga0316601_1016018502	3300033419	Soil	QRLGEASDAEWRPRLHAALDEADTYLFRGGHYPALGTAARGMLLRALGRAAEGDAALREVIVLPDRALAHHIARLALEGR
Ga0316601_1017556502	3300033419	Soil	EAGDAQWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRGPEGNEALRQVFVLPDKGLPHHIARLALLEP
Ga0326726_113259752	3300033433	Peat Soil	FRGGHYPAVATCARGMLLRALGRAHEGDLALRQVFVLPDKAMPHHIARLALQEHEKE
Ga0316620_109294412	3300033480	Soil	ALAEADLYLFRGGHYPALATCARGMLLRALGRVPEGDDALRQVFVLPDKGMPHHMARLALTEQ
Ga0316627_1007381613	3300033482	Soil	YRAAQRLGEASEAEWRPRLETALAEADLYLFRGGHYPAVATCARGMLLRALGRVPEGDEALRQVFVLPDKGLPHHIARLALQEPWK
Ga0316627_1014794831	3300033482	Soil	YLFRGGHYPALATCSRGLLLRALGRVPEGDEALRQVFVLPDKGMPHHIARLALQEP
Ga0316629_110628172	3300033483	Soil	ALEEADTYLFRGGHYPAVATCARGLLLRALGRTSEGDEALRQVFTLPDKGMPHQIARLARMEP
Ga0299912_101322791	3300033489	Soil	EADTYLFRGGHYPAVATGARGMLLRALGRAPEGDEALRQVFVLPDRALAHHVARLALQEPSKRGMP
Ga0299912_101803763	3300033489	Soil	AYRSAQRLGEASDAEWQPRLRAALDEAETYLFRGGHYPALATCSRGMLLRALRRVPEGDEALRQVFVLPDKGMPHHIARLALEER
Ga0299912_103505113	3300033489	Soil	RPRLESALAEAELYLFRGGHYPAIAMCARGMLLRALGRRSEGDEVLRRVFVLPDKGMPHHMARLGLEEPL
Ga0316628_1005442932	3300033513	Soil	DFRQAAFAYRAAQRLGEAGDAEWRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRVSEGDEALRQVFVLPDKGMPHHMARRALHEP
Ga0316616_1013968741	3300033521	Soil	EADLYLFRGGHYPAGATCARGMLLRALGRGPEGEEALRQVFVLPDKGMPHHIARLALQEP
Ga0373899_009296_2_238	3300034077	Sediment Slurry	LGQASEAEWRPRLEAALAEADLYLFRGGHYPAGATAARGMLLRALGRGPEGEEALRQAFVLPDKGLAHHIARLALQEP
Ga0364942_0187129_497_676	3300034165	Sediment	DLYLFRGGHYPAVATCARGMLLRALGRNADGDEALRQVFVLPDKGMPHHIARIALQEPQ
Ga0364932_0053469_1306_1521	3300034177	Sediment	WRPRLEAALAEADLYLFRGGHYPAVATCARGMLLRALGRIAEGDDALRQVFVLPDKGMPHHIARIALQEPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences