Metagenome Family F101430

Basic Information
Family ID	F101430
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	65 residues
Representative Sequence	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARTVMHAVLAD
Number of Associated Samples	62
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (63.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (42.157 % of family members)
Environment Ontology (ENVO)	Unclassified (45.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.941 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92. 1Ga0055447_102640332 2Ga0055493_101656691 3Ga0055491_101551252 4Ga0066604_100890251 5Ga0066601_102772672 6Ga0066599_1008438222 7Ga0069718_147078601 8Ga0062383_100204911 9Ga0073903_104494691 10Ga0079037_1006471283 11Ga0079037_1010293421 12Ga0105093_103731533 13Ga0105090_101829191 14Ga0105090_105766791 15Ga0105090_108753772 16Ga0105094_100905381 17Ga0113563_105138991 18Ga0113563_113405283 19Ga0113563_133952413 20Ga0105096_100528861 21Ga0115028_103322931 22Ga0115028_104655341 23Ga0115028_118521652 24Ga0123573_103583613 25Ga0123573_115241343 26Ga0116154_101719273 27Ga0136852_100921851 28Ga0139324_10096364 29Ga0075345_10498241 30Ga0075339_11040431 31Ga0124853_13306785 32Ga0210098_10453331 33Ga0208783_103425691 34Ga0210134_10448602 35Ga0208146_10054863 36Ga0256808_10558532 37Ga0256807_10237801 38Ga0256807_10274581 39Ga0256807_10620631 40Ga0256806_10248301 41Ga0209704_10097495 42Ga0209492_10549781 43Ga0209492_11947833 44Ga0209261_101053852 45Ga0209800_104528562 46Ga0209397_106047422 47Ga0209254_106283261 48Ga0209668_106113831 49Ga0209391_101034901 50Ga0316575_100853361 51Ga0316576_107482623 52Ga0315290_109840981 53Ga0315905_111304593 54Ga0315292_101242254 55Ga0315295_112058821 56Ga0316604_102223381 57Ga0316604_104080173 58Ga0316604_105913342 59Ga0316605_101487714 60Ga0316605_110527623 61Ga0316603_100174596 62Ga0316603_101936144 63Ga0316603_102665293 64Ga0316603_104544533 65Ga0316619_101694961 66Ga0316619_114420821 67Ga0316622_1005017113 68Ga0316622_1008599481 69Ga0316622_1017841603 70Ga0316625_1000903684 71Ga0316625_1014398403 72Ga0316625_1017296641 73Ga0316625_1025001111 74Ga0316601_1011367023 75Ga0316601_1014367793 76Ga0316613_100089641 77Ga0316613_108044852 78Ga0316613_108884532 79Ga0316613_110210002 80Ga0316613_110268651 81Ga0316613_110519911 82Ga0316613_110877821 83Ga0316600_103787903 84Ga0316600_104022793 85Ga0316600_106803431 86Ga0316600_108102291 87Ga0316600_111046721 88Ga0316626_101440101 89Ga0316626_120514261 90Ga0316624_122002532 91Ga0316621_107183573 92Ga0316621_115855082 93Ga0316628_1029160752 94Ga0316616_1041955562 95Ga0316617_1004198373 96Ga0316617_1010400711 97Ga0316617_1018418261 98Ga0316617_1023249261 99Ga0373890_081453_1_222 100Ga0373895_020156_1_192 101Ga0373895_027333_3_215 102Ga0373918_0019709_2_193
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92. 1Ga0055447_102640332 2Ga0055493_101656691 3Ga0055491_101551252 4Ga0066604_100890251 5Ga0066599_1008438222 6Ga0069718_147078601 7Ga0073903_104494691 8Ga0105090_101829191 9Ga0113563_105138991 10Ga0105096_100528861 11Ga0115028_118521652 12Ga0123573_115241343 13Ga0136852_100921851 14Ga0075339_11040431 15Ga0210098_10453331 16Ga0208783_103425691 17Ga0256807_10620631 18Ga0209492_10549781 19Ga0209668_106113831 20Ga0316576_107482623 21Ga0315292_101242254 22Ga0316604_104080173 23Ga0316604_105913342 24Ga0316605_110527623 25Ga0316625_1025001111 26Ga0316613_100089641 27Ga0316626_120514261 28Ga0373918_0019709_2_193
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0105090_108753772 2Ga0055447_102640332 3Ga0055491_101551252 4Ga0066604_100890251 5Ga0079037_1006471283 6Ga0113563_105138991 7Ga0113563_113405283 8Ga0115028_103322931 9Ga0116154_101719273 10Ga0139324_10096364 11Ga0075345_10498241 12Ga0075339_11040431 13Ga0210098_10453331 14Ga0208783_103425691 15Ga0256807_10274581 16Ga0256807_10620631 17Ga0256806_10248301 18Ga0209492_11947833 19Ga0209397_106047422 20Ga0209668_106113831 21Ga0316576_107482623 22Ga0315290_109840981 23Ga0315292_101242254 24Ga0316604_102223381 25Ga0316605_110527623 26Ga0316603_100174596 27Ga0316625_1025001111 28Ga0316613_110519911 29Ga0316600_103787903 30Ga0316600_104022793 31Ga0316626_120514261 32Ga0373918_0019709_2_193
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.05% β-sheet: 0.00% Coil/Unstructured: 82.95%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07449	HyaE	76.47
PF01750	HycI	16.67
PF01292	Ni_hydr_CYTB	2.94
PF00374	NiFeSe_Hases	1.96
PF14720	NiFe_hyd_SSU_C	0.98
PF04809	HupH_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0680	Ni,Fe-hydrogenase maturation factor	Energy production and conversion [C]	16.67
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	2.94
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	2.94
COG3038	Cytochrome b561	Energy production and conversion [C]	2.94
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	2.94
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	2.94
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	1.96
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	1.96

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	36.27 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	36.27 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.27 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.29 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.73 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.96 %
Unclassified	root	N/A	63.73 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.96 %
Unclassified	root	N/A	63.73 %

Scaffold	Taxonomy	Length	IMG/M Link
3300004028\|Ga0055447_10264033	Not Available	574	Open in IMG/M
3300004049\|Ga0055493_10165669	Not Available	512	Open in IMG/M
3300004050\|Ga0055491_10155125	Not Available	602	Open in IMG/M
3300004241\|Ga0066604_10089025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1222	Open in IMG/M
3300004242\|Ga0066601_10277267	Not Available	653	Open in IMG/M
3300004282\|Ga0066599_100843822	Not Available	649	Open in IMG/M
3300004481\|Ga0069718_14707860	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300004778\|Ga0062383_10020491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2337	Open in IMG/M
3300005657\|Ga0073903_10449469	Not Available	565	Open in IMG/M
3300006224\|Ga0079037_100647128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	5.88%
Environmental	Environmental	92.16%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	47.06%
Bioremediation	Engineered → Bioremediation	3.92%
Plants	Host-Associated → Plants	1.96%
Terrestrial	Environmental → Terrestrial	45.10%
Wastewater	Engineered → Wastewater	1.96%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.98%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.98%
Freshwater	Environmental → Aquatic → Freshwater	38.24%
Marine	Environmental → Aquatic → Marine	5.88%
Metal	Engineered → Bioremediation → Metal	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Sediment	2.94%
Soil	Environmental → Terrestrial → Soil	45.10%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	2.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.96%
Pond	Environmental → Aquatic → Freshwater → Pond	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.71%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	45.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.90%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.88%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	45.10%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.98%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.98%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.88%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	3.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	42.16%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.92%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.96%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004028	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordC_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004241	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005657	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_bulk	Engineered	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 62 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055447_102640332	3300004028	Natural And Restored Wetlands	MTEHVLTWHPKVPGELPAAEGSDEQLRLIGMPTGLVRPARQTLAADQLTAAARTRLHEITADLRARTEDPSAPP
Ga0055493_101656691	3300004049	Natural And Restored Wetlands	MTDHVLIWHPKVPGEVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTPAAREI
Ga0055491_101551252	3300004050	Natural And Restored Wetlands	MTEHVLVWHPKVSGEAPAPAVGGDDQLRLIGMPTGLVRPARQALTADQLTPVARAILDEVVADLRRRVDAPDAPPTR
Ga0066604_100890251	3300004241	Freshwater	MTEHVLVWHPKGTGDAPIAGEEPLRLIGMPTGLVRPARQTPANEELTAAARAVMNEVIAD
Ga0066601_102772672	3300004242	Freshwater	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVMHEVLADLQRRAEAP
Ga0066599_1008438222	3300004282	Freshwater	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTSPARAVMHEVLAVLGRQALSPSDPPTRISLDD
Ga0069718_147078601	3300004481	Sediment	MTEHVLVWHPKVSGDAPAAATTDDQLRLIGMPTGLVRPARHALAADQLTPAAREIMDAIVAD
Ga0062383_100204911	3300004778	Wetland Sediment	MTEHVLVWHPKVPGESPALGDDQLRLIGMPTGLVRPARQALAADQMTPAARA
Ga0073903_104494691	3300005657	Activated Sludge	MTEHVLVWHPKVPGDAPADSDDQLRLIGMPTGLVRPARQTPANEELTTASR
Ga0079037_1006471283	3300006224	Freshwater Wetlands	MTEHVLVWRPKVPGDVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTPAAREIMEAVVADLRR
Ga0079037_1010293421	3300006224	Freshwater Wetlands	MTEHVLVWHPKVSGDAPATAIGDDQVRLIGMPTGLVRPVRQALATDQLTPAGREIMDAIVADLQRRAAGMD
Ga0105093_103731533	3300009037	Freshwater Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVM
Ga0105090_101829191	3300009075	Freshwater Sediment	MTEHVLVWHPKVPGDAPATATGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREILDAIVADLGERAAGKVAPP
Ga0105090_105766791	3300009075	Freshwater Sediment	MTEHVLVWHPKVSGEAPAPATGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAILEEVVADLRRRIDAPDAPPTRFDLG
Ga0105090_108753772	3300009075	Freshwater Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARTVMHAVLAD
Ga0105094_100905381	3300009153	Freshwater Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVMHEVLADLQRRAEAPTEAPTRIVLSGL
Ga0113563_105138991	3300009167	Freshwater Wetlands	MTEHVLVWHPKVSGEVPAAAVGDDQLRLIGMPTGLVRPARQAFAADELTPAAREIMDAIVEDLRQRAAAPDLPVTRFS
Ga0113563_113405283	3300009167	Freshwater Wetlands	MTEHVLVWHPKVSGETPAAAIGDDQVRLIGMPTGLVRPVRQALATDQLTPAAREIMDAIVADLQRRAAG
Ga0113563_133952413	3300009167	Freshwater Wetlands	MTEHVLVWHPKVPGDAPADSDDQLRLIGMPTGLVRAARQTPANEELTAAARAVMNEV
Ga0105096_100528861	3300009170	Freshwater Sediment	MTEHVLTWYPKVPGPDETAATAVDDSLRLIGMPTGLVRPVRQALAADHLTPASRAVVDQVLAE
Ga0115028_103322931	3300009179	Wetland	MTEHVLVWHPKVSGAVPAAAVGDDQLRLIGMPTGLVRPARQALATDQLTPAAREVMDAVVADLSSRAAGTEAP
Ga0115028_104655341	3300009179	Wetland	MTEHVLVWHPKVPGDAPATVASDDQLRLIGMPTGLVRPARQAFAADQLT
Ga0115028_118521652	3300009179	Wetland	MTEHVLVWHPQVPGEAPGGGDDKLRLIGMPTGLLRPARQALAA
Ga0123573_103583613	3300009509	Mangrove Sediment	MTDHVLIWHPKVPGEVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTPAAREIMDAVVADL
Ga0123573_115241343	3300009509	Mangrove Sediment	MTEHVLTWHPKVPGDSSAADDSELRLIGMPTGLLRPPRQALAADQLTPA
Ga0116154_101719273	3300009776	Anaerobic Digestor Sludge	MTEHVLVWHPKVSGDAPAAATTDDQLRLIGMPTGLVRPARNALAADQLTPAAREIMDAIVADLHQRASTPDLPVKRYSL
Ga0136852_100921851	3300010412	Mangrove Sediment	MTEHVLTWHPKVPGDSSAADDSELRLIGMPTGLLRPPRQALAAEQLTPASRAVMNEILEDLRSRAGSEN
Ga0139324_10096364	3300010997	Sediment	MTEHVLTWHPKVPGDSSAAGDAELRLIGMPTGLLRPSRQALAADQLTPASRAVMNEILEDLRRRAGEKDAPARRIDLG
Ga0075345_10498241	3300014312	Natural And Restored Wetlands	MTENVLVWHPKVPGEVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTREAREIMDAVV
Ga0075339_11040431	3300014316	Natural And Restored Wetlands	MTENVLVWHPKVPGETVTGGDDELRLIGMPTGLVRPVRQALAADQLTPRARAVLNEVLAELRSHAQERGRAPARFDLDGL
Ga0124853_13306785	3300024056	Freshwater Wetlands	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPALVG
Ga0210098_10453331	3300025550	Natural And Restored Wetlands	MTEHVLVWHPKVPGDAQTAGEDPIRLIGMPTGLVRPARQALAADQLTPEARALLHEMVADLRRRIETPDA
Ga0208783_103425691	3300025872	Aqueous	MTEHVLVWHPKVPGDAPAGAVAEDQLRLIGMPTGLVRPARQTPADEELSPAARAVMDQVAADLR
Ga0210134_10448602	3300025950	Natural And Restored Wetlands	MTEHVLVWHPKVPGDAPATVAGDDQLRLIGMPTGLVRPARQVLAAEHLT
Ga0208146_10054863	3300026064	Natural And Restored Wetlands	MTEHVLTWHPKVPGELPAAEGSDEQLRLIGMPTGLVRPARQTLAADQLTAAARTRLHEITADLRSRTEDPSAPPRRFSLADLD
Ga0256808_10558532	3300026476	Sediment	MTEHVLVWHPKVPGDVPAAAVGDDQLRLIGMPTGLLRPARQALAADQLTPAAREIMEAVIEDLRRRVATPDAPPLRFRL
Ga0256807_10237801	3300026477	Sediment	MTEHVLVWHPKVPGDVPAAAVGDDQLRLIGMPTGLLRPARQALAADQLTPAAREIMEAVIEDLR
Ga0256807_10274581	3300026477	Sediment	MTEHVLTWHPKVPGEVPQGAVGDDQPRLIGMPTGLVRPARQALAADQLTPPGRAIL
Ga0256807_10620631	3300026477	Sediment	MTEHVLVWHPKVPGEAASGGEEQPRLIGMPTGLVRPARQVLAADQLTPEARTTMHEVVADLRRRAAAPDALPARFSLAN
Ga0256806_10248301	3300026501	Sediment	MTEHVLVWHPKVPGEAQTGGEDPIRLIGMPTGLVRPARQALATDELTPDARALMHEIVADLRRRI
Ga0209704_10097495	3300027693	Freshwater Sediment	MTEHVLVWHPKVSGEAPAPAIGGDDQLRLIGMPTGLVRPVRQAFAADQLTPAAREIM
Ga0209492_10549781	3300027721	Freshwater Sediment	MTEHVLIWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARTVMHAVLADLQRQA
Ga0209492_11947833	3300027721	Freshwater Sediment	MTEHVLTWYPKVPGPGETAATAVDDSLRLIGMPTGLVRPVRQALAADHLTPASRAVVDQVLAEVRR
Ga0209261_101053852	3300027735	Wetland Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTSPARAVMHEVLAVLGRQALSPSDPPTRSQRCCGPAR
Ga0209800_104528562	3300027800	Freshwater	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVMHEA
Ga0209397_106047422	3300027871	Wetland	MTEHVLVWHPKVSGEAPAAAIGDDQLRLIGMPTGLVRPARQALSADQLTPEAREIMDAIVEDLRRRIETPEAPPMRFRL
Ga0209254_106283261	3300027897	Freshwater Lake Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTSP
Ga0209668_106113831	3300027899	Freshwater Lake Sediment	MTEYVLVWHPKVPGELPSGGEEQPRLIGMPTGLVRPARQALAADQLSPGARAMLHEVVADLRARIESPEMPPRRFSLEGLDEDGKA
Ga0209391_101034901	3300027975	Freshwater Sediment	MTEHVLVWHPKVPGDAPATATGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREILDAIV
Ga0316575_100853361	3300031665	Rhizosphere	MTEQVLTWHPRVPGDSSAAGDAELRLIGMPTGLLRPSRQALAADQLTPAARSV
Ga0316576_107482623	3300031727	Rhizosphere	MTEHVLVWHPRFPGEVPDASDDQLRLIGMPTGLVRPARQALAADQLAPEGRAIMHEVVA
Ga0315290_109840981	3300031834	Sediment	MTEHVLVWHPKVPGDAPAASDEQLRLIGMPTGLVRAARQTPADEELTAASRAVMNEVV
Ga0315905_111304593	3300032092	Freshwater	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPPA
Ga0315292_101242254	3300032143	Sediment	MTEHVLVWHPKVPGESPVPGDDQLRLIGMPTGLVRPARQALAADQMTPAARAVLDQAVA
Ga0315295_112058821	3300032156	Sediment	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTSPARAVMHEVLAVLGRQALSPSDPPTRI
Ga0316604_102223381	3300033406	Soil	MTEHVLVWHPKVPGDAPATTVGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREIMDAIMADLGDRA
Ga0316604_104080173	3300033406	Soil	MTEHVLVWHPKVPGDAPATVAGGADELRLIGMPTGLVRPARQVLAADRLTPESREIMD
Ga0316604_105913342	3300033406	Soil	MTEHVLTWFPKVPGPGETAATAADDSLRLIGMPTGLVRPARQALAADQLT
Ga0316605_101487714	3300033408	Soil	MTEHVLVWHPKVPGEAPAAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVLDRVIA
Ga0316605_110527623	3300033408	Soil	MTEHVLVWHPKVSGDTPAAGEDPPRLIGMPTGLVRPARQALAADRLTPAARTLMQEVVADLQRRTVEPDQPPRRFLL
Ga0316603_100174596	3300033413	Soil	MTEHVLVWHPKVPGEAPAAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVLDRVIAALRRHA
Ga0316603_101936144	3300033413	Soil	MTEHVLVWHPKVPGDAPATAATDDQLRLIGMPTGLVRPARQALAADQLTP
Ga0316603_102665293	3300033413	Soil	MTEHVLVWHPKVSGDVPATAVGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREILDAIVADLGERAAGKVAP
Ga0316603_104544533	3300033413	Soil	MTEHVLVWHPKVPGDVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTPAAREIMDAVVTDLRRRIESPEAPPM
Ga0316619_101694961	3300033414	Soil	MTEHVLVWHPKVPGDAPATTVGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREIMDAIMADLGDRAAGKVAPPTRYSLRDLDE
Ga0316619_114420821	3300033414	Soil	MTEHVLVWHPKVPGDAPATATGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREIMDAIVADLGER
Ga0316622_1005017113	3300033416	Soil	MTEHVLVWHPKLSGTVPAAAIGDDQLRLIGMPTGLVRPARQALSTDQLTPAARE
Ga0316622_1008599481	3300033416	Soil	MTEYVLVWHPKVPGELPSGGEEQPRLIGMPTGLVRPARQALAADQLSPAARAMLQEVVADLRARIESPEMPPRRFSLEGLDEDGKAAVA
Ga0316622_1017841603	3300033416	Soil	MTEHVLVWHPKVSGAVPAAAVGDDQLRLIGMPTGLVRPARQALATDQLTPAAREVMDAVVADLSSRAAGTEA
Ga0316625_1000903684	3300033418	Soil	MTEHVLVWHPQVPGEAPGGGDDKLRLIGMPTGLLRPARQALAADQLTPRAR
Ga0316625_1014398403	3300033418	Soil	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTP
Ga0316625_1017296641	3300033418	Soil	MTEHVLVWHPKVSGDTPAAGEDPPRLIGMPTGLVRPARQALAADRLTPAARTLMQEVV
Ga0316625_1025001111	3300033418	Soil	MTEHTLVWHPKVPGPGETPATAADDSLRLIGMPTGLVRPARQALAADQLTAASRAAVDQVLAELRQRRTNPDLP
Ga0316601_1011367023	3300033419	Soil	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVMHEMLADLQRQAEA
Ga0316601_1014367793	3300033419	Soil	MTEHVLVWHPKVSGETPAAVGDDQLRLIGMPTGLVRPARQALAADQLTAAARAILDEVVADLRRRIDAPDAPP
Ga0316613_100089641	3300033434	Soil	MTEYALVWHPKVPGELPSGGEEQPRLIGMPTGLVRPARQALAADQLSPGARAMLHEV
Ga0316613_108044852	3300033434	Soil	MTEHVLVWHPKVPGDAPATAATDDQLRLIGMPTGLVRPARQALAADQLTPAAREIMDAIVADLRARAAAPDRPVTRF
Ga0316613_108884532	3300033434	Soil	MTEHVLVWHPKVPGEAPAAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVLDRVIAALRRHAEAPDAPTRIDFDALDE
Ga0316613_110210002	3300033434	Soil	MTEHVLVWHPKVPGDAPATVAGGADELRLIGMPTGLVRPARQVLAADRLTPEARE
Ga0316613_110268651	3300033434	Soil	MTEYVLVWHPKVPGELPSGGEEQPRLIGMPTGLVRPARQALAADQLSPGARAMLHEV
Ga0316613_110519911	3300033434	Soil	MTEHVLVWHPKVPGDAPATVASDDQLRLIGMPTGLVRPARQAFAAEQLTPAAREIMDAI
Ga0316613_110877821	3300033434	Soil	MTEHVLVWHPKVSGAVPAAAVGDDQLRLIGMPTGLVRPARQALATDQLTPAAREVMDAVVAD
Ga0316600_103787903	3300033481	Soil	MTEHVLVWHPKVPGDAPATVAGGADELRLIGMPTGLVRPARQVLAADRLTPEAREIMDAIVADLR
Ga0316600_104022793	3300033481	Soil	MTEHVLVWHPQVPGEAPGGGDDKLRLIGMPTGLLRPARQALAADQLTPRARAVMHEVLADLARQALTPSDL
Ga0316600_106803431	3300033481	Soil	MTEHVLVWHPKVPGEAPAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAV
Ga0316600_108102291	3300033481	Soil	MTEHVLVWHPKVPGEAPAPGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVLD
Ga0316600_111046721	3300033481	Soil	MTEHVLTWYPKVPAPGETAATAVDDSLRLIGMPTGLVRPARQALAADHLTPASRAVIDEVLAEVRRRVTEPDLPP
Ga0316626_101440101	3300033485	Soil	MTEHTLVWHPKVPGPGETPATAADDSLRLIGMPTGLVRPARQALAADQLTAASR
Ga0316626_120514261	3300033485	Soil	MTETVLVWHPKVPGDVPAEADEQLRLIGMPTGLVRPARPTVAGDELTAAARAVVNEVVAD
Ga0316624_122002532	3300033486	Soil	MTEHVLVWHPKVSGEAPAAAIGDDQLRLIGMPTGLVRPVRQALAADQLTPEAREIMDAIVEDLRRRIETPEAPPMRFRLND
Ga0316621_107183573	3300033488	Soil	MTEHVLVWHPKVSGDTPPAAIGDDQVRLIGMPTGLVRPVRQALATDQLTPAGREIMDAIVADLQ
Ga0316621_115855082	3300033488	Soil	MSEHVLVWHPKVPGDAPATVAGGADELRLIGMPTGLVRPARQVLAADRLKPEARE
Ga0316628_1029160752	3300033513	Soil	MTEHVLVWHPKVSGEVPAAAVGDDQLRLIGMPTGLVRPARQAFAADELTPAAREIMDAVVAD
Ga0316616_1041955562	3300033521	Soil	MTEHVLVWRPKVPGDVPAAAVGDDQVRLIGMPTGLVRPARQALAADQLTPAAREIMEAVV
Ga0316617_1004198373	3300033557	Soil	MTEHVLVWHPKVPGEAPAAGGDDQLRLIGMPTGLVRPARQALAADQLTPAARAVLDRV
Ga0316617_1010400711	3300033557	Soil	MTEHVLVWHPQVPGEAPGGGDDKLRLIGMPTGLLRPARQALAADQLTPRARAVMHEVLAD
Ga0316617_1018418261	3300033557	Soil	MTEHVLVWHPKVPGDAPATTVGDDQLRLIGMPTGLVRPVRQALSADQLTPAAREIMDAIMADLGDR
Ga0316617_1023249261	3300033557	Soil	MTEHVLVWHPKVPGDAPATAATDDQLRLIGMPTGLVRPVRQALAADQLTPAAREIMDAIVADLRARAAAPDRPVTRFSLN
Ga0373890_081453_1_222	3300034053	Sediment Slurry	MTEHVLVWHPKVPGEAPAAAIGDDQLRLIGMPTGLVRPVRQALSADELTPAAREVMDAIVADLRSRAAGTEAPP
Ga0373895_020156_1_192	3300034075	Sediment Slurry	MTEHVLVWHPKVPGEAPATATGDDQLRLIGMPTGLVRPVRQALSADELTPAAREVMDAIVADLR
Ga0373895_027333_3_215	3300034075	Sediment Slurry	MTEHVLVWHPKVPGDAPATAVGDDQLRLIGMPTGLVRPTRQALAADQLTPASREIMDAIVADLRDRAAGTE
Ga0373918_0019709_2_193	3300034420	Sediment Slurry	MTEHVLVWHPKGSGEAPIAGDDAPRLIGMPTGLVRPPRRTSADDHLTAAARAVMQQVIDDLERR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101430

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences