Metagenome Family F101395

Basic Information
Family ID	F101395
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	94 residues
Representative Sequence	VLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (58.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.745 % of family members)

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.51% β-sheet: 50.88% Coil/Unstructured: 45.61%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
b.61.3.1: D-aminopeptidase, middle and C-terminal domains	d1ei5a2	1ei5	0.86819
b.61.3.1: D-aminopeptidase, middle and C-terminal domains	d1ei5a1	1ei5	0.71752
b.61.7.1: Extracellular hemoglobin linker subunit, receptor domain	d2gtlo1	2gtl	0.70838
b.61.7.1: Extracellular hemoglobin linker subunit, receptor domain	d2gtln1	2gtl	0.69645
b.60.1.0: automated matches	d2l5pa_	2l5p	0.69396

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01979	Amidohydro_1	31.37
PF13594	Obsolete Pfam Family	9.80
PF11954	DUF3471	8.82
PF13193	AMP-binding_C	0.98
PF12680	SnoaL_2	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	45.10%
Host-Associated	Host-Associated	54.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	54.90%
Terrestrial	Environmental → Terrestrial	40.20%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.27%
Roots	Host-Associated → Plants → Roots	3.92%
Sediment	Environmental → Aquatic → Sediment	3.92%
Soil	Environmental → Terrestrial → Soil	39.22%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	24.51%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	24.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 85 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055437_102587612	3300004009	Natural And Restored Wetlands	VCEDKTQFWTGNISDLQKSAIAVPEDVLKSYVGFYSGYWRANLRNVTVTLEDGRLHVTALLLPGTVELIPEADSVFTSTEGVTYKFVKNDKGAIVRLEEIHRGGNYVLMPKPAPQDAGRTQ*
Ga0062590_1008195771	3300004157	Soil	EFWTGNISDLQKSAVKVSEDVMKKYVGYYEGYWRDNLRKVTVSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKLVMDASGKVVQVEEIHRGGNYVLKRQN*
Ga0062594_1008865862	3300005093	Soil	WRDNLRKVTVSLENGALHVTGLLLPESVPLVPASDTIFTSEEGVSYKFVMDASGKVTHVEEIHRGGNYILKRQK*
Ga0070690_1012093171	3300005330	Switchgrass Rhizosphere	RANLRKVTMTLEGGALHATGLLLPEAVTLIPESDTIFTSEEGVSYKFVMDASGTVTHVEEIHRGGNYILNRKK*
Ga0070670_1007171992	3300005331	Switchgrass Rhizosphere	YYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDKGAVIRAEEIHRGGNYVLNRKN*
Ga0070670_1012085361	3300005331	Switchgrass Rhizosphere	SEDVLKQYVGYYEGYWRANLRKVTVTLDGGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGAIIRTEEIHRGGNYILNRKN*
Ga0070677_100469072	3300005333	Miscanthus Rhizosphere	QYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPEANDLFTTTEGVSYKFVKDDSGAVIRAEEIHRGGNYVLNRKN*
Ga0068868_1015714722	3300005338	Miscanthus Rhizosphere	KVSEDLLKQYVGSYEGYWRANLRQVKVTLERGTLYVNGLLLPGMVELIPESDDVFTTSEGVSYKFVKGDTGKVIRAEEIHRGGNYILDRKN*
Ga0068868_1020716181	3300005338	Miscanthus Rhizosphere	SDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLENGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGKIIRTEEIHRGGNYILNRKGEAPPR*
Ga0070689_1019766742	3300005340	Switchgrass Rhizosphere	VCESKMEFWTGNLSDLQKSAVVVPADVLKEYVGYYEGYWRANLRKVTVTLEGGLLHVTGLLLPGTVELIPEANDLFTTTEGVSYKFVKDEKGAVIRAEEIHRGGNYVLNRK*
Ga0070668_1011199522	3300005347	Switchgrass Rhizosphere	ESKMQFWTGNISDLQKSAVKVSEDVLKQYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPEANDLFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN*
Ga0070668_1016863531	3300005347	Switchgrass Rhizosphere	GYYEGYWRANLRKVTMSLEGGALRATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK*
Ga0070669_1005451262	3300005353	Switchgrass Rhizosphere	LEEVCEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRRVTVTLEGGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKK*
Ga0070669_1007382951	3300005353	Switchgrass Rhizosphere	LEEVCEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR
Ga0070675_1020863651	3300005354	Miscanthus Rhizosphere	SEDVLKQYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPEANDLFTTTEGVSYKFVKDDSGAVIRAEEIHRGGNYVLNRKN*
Ga0070673_1011078242	3300005364	Switchgrass Rhizosphere	LEEVCESKMEFWTGNISDLQKSAVRVPEDVLKQYVGSYEGYWRANLRKVTVTLDGGTLHVTGLLLPGTVELIPESESVFTTTEGVSYAFVKDETGAVIRAEEIHRGGNYVLNRKK*
Ga0070688_1009732691	3300005365	Switchgrass Rhizosphere	FWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0070667_1014008441	3300005367	Switchgrass Rhizosphere	CEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEATPR*
Ga0070678_1016425361	3300005456	Miscanthus Rhizosphere	KVSDDVMKKYAGYYEGYWRNNLRKVTISLKNGVLYASGLLVPESVPLIPASDTLFTSEEGVPYNFVMDSNGMVTHVEEIHRGGNYVLKRQK*
Ga0070678_1021859441	3300005456	Miscanthus Rhizosphere	EFWTGNISDLQKSAVKVSEDVMKKYVGYYEGYWRDNLRKVTVSLDKGVLHVTGLLLPESVPLIPQSDTIFTSEEGVSYRFVMDASGKVTHAEEIHRGGEYVLKRQK*
Ga0070662_1012372041	3300005457	Corn Rhizosphere	EEVCEAKMEFWTGSVSDLEKTRVQVPEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK*
Ga0070699_1004729751	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KSAVKVSEDVLKQYVGYYEGYWRANLRKVTVTLEGATLRVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKK*
Ga0070699_1018700051	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TGSVSDLEKGRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKDGKLYATGLLLPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRTEEIHRGGNYILNRKN*
Ga0070672_1001377981	3300005543	Miscanthus Rhizosphere	VLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN*
Ga0070672_1006459861	3300005543	Miscanthus Rhizosphere	YWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK*
Ga0070686_1000373561	3300005544	Switchgrass Rhizosphere	VCEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN*
Ga0070664_1023194631	3300005564	Corn Rhizosphere	DDVLKQYVGNYEGYWRANLRKVTVTLEGGTLHVTGLLLPGAVELIPESESVFTTIEGVSYAFIKDATGAVVRAEEIHRGGNYVLNRKP*
Ga0068870_111156471	3300005840	Miscanthus Rhizosphere	SEETMRKYVGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK*
Ga0068860_1011613881	3300005843	Switchgrass Rhizosphere	YEGYWRDNLRKVTVSLENGTLHVTGLLLPESVPLVPSSDTIFTSEEGVSYKFVMDASGKVVQVEEIHRGGNYVLKRQN*
Ga0068862_1007158631	3300005844	Switchgrass Rhizosphere	EGYWRDNLRKVTVSLENGTLHVTGLLLPESVPLVPSSDTIFTSEEGVSYKFVMDASGKVVQVEEIHRGGNYVLKRQN*
Ga0068862_1027683402	3300005844	Switchgrass Rhizosphere	EFWTGSVSDLEKTRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK*
Ga0097621_1004527622	3300006237	Miscanthus Rhizosphere	MLEEVCEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFIKDDKGAVIRTEEIHRGGNYVLNRKGEATPR*
Ga0097621_1006743861	3300006237	Miscanthus Rhizosphere	LQFSLDMELVTDTEMVEEVCESRMESWTGTISDLRKSAVKVSDDVMKKYAGYYEGYWRNNLRKVTISLKNGVLYASGLLVPESVPLIPASDTLFTSEEGVPYNFVMDSNGMVTHVEEIHRGGNYVLKRQK*
Ga0068871_1010003431	3300006358	Miscanthus Rhizosphere	EVCEAKQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0068871_1013611022	3300006358	Miscanthus Rhizosphere	EEVCESKMEFWTGNVSDLQKSAVKVSEDLLKQYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDKGAVIRAEEIHRGGNYVLNRKN*
Ga0068865_1007336952	3300006881	Miscanthus Rhizosphere	FWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFIKDDKGAVIRTEEIHRGGNYVLNRKGEATPR*
Ga0111539_134620121	3300009094	Populus Rhizosphere	KYAGYYEGYWRANLRKVTMSLEGGALRATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK*
Ga0111538_103153901	3300009156	Populus Rhizosphere	KTRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKDGKLHATGLLVKEDVPLIPESDTVFTSEEGVSYKFVMDDSGKVIRTEEIHRGGNYILNRK*
Ga0105238_123717961	3300009551	Corn Rhizosphere	ANLRKVTVTLDGGTLHVTGLLLPGTVELIPESSDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0105249_124900992	3300009553	Switchgrass Rhizosphere	LKQYVGYYEGYWRANLRKVTVTLENGTLHVTGLLLPGSVELIPESNDVFTTTEGVSYKFVKDDKGAVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0126306_109733822	3300010166	Serpentine Soil	ISDLEKTRVQVSEATMKKYVGYYEGYWRANLRKVTMSLKDGKLHATGLLVKEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRTEEIHRGGNYILNRK*
Ga0134124_122125611	3300010397	Terrestrial Soil	DVLKQYVGYYEGYWRANLRKVTVTLENGTLHVTGLLLPGSVELIPESNDVFTTTEGVSYKFVKDDKGAVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0134121_112716521	3300010401	Terrestrial Soil	EETMRKYAGYYEGYWRANLRKVTMSLEGGALHATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK*
Ga0137424_11396522	3300011412	Soil	RERPRVRGSEETMRKDAGYYEGYWRDTLRKVTMSLAGGGLHATGLLIPEAVPLIPQSDTIFTSEEGVSYQFVMDGSGTVIRVEEIHRGGNYVLNRKGEAAPR*
Ga0137433_13146261	3300011440	Soil	TMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLVPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK*
Ga0137435_10409921	3300012232	Soil	KVTMSLKDGKLYATGLLVSEAVPLIPESDTIFTSEEGVSYKFVMDANGKVIRTEEIHRGGNYVLNRKGDAAPR*
Ga0150984_1236511462	3300012469	Avena Fatua Rhizosphere	LEEVCESKMEFWTGSISDLQKSAVKVSDDVLRQYVGSYEGYWRANLRQVKVTLERGTLYVNGLLLPGMVELIPESDDVFTTSEGVSYKFVKGDTGKVIRAEEIHRGGNYILDRKN*
Ga0157309_100327991	3300012895	Soil	TMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR*
Ga0157285_101943362	3300012897	Soil	YWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR*
Ga0157299_101444421	3300012899	Soil	TGNISDLQKSAVKVSEDVMRKYVGYYEGYWRDNLRKVTVSLENGALHVTGLLLPESVPLVPASDTIFTSEEGVGYKFVMDASGTVTHAEEIHRGGNYVLDRKGEAAPR*
Ga0157282_100358751	3300012904	Soil	VGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVTDDKGAVIRTEEIHRGGNYVLNRKN*
Ga0157301_103871652	3300012911	Soil	EDVMKKYVGYYEGYWRDNLRKVTVSLENGALHVTGLLLPESVPLVPASDTIFTSEEGVSYKFVMDAIGKVTHAEEIHRGGEYVLKRLK*
Ga0157310_104600072	3300012916	Soil	QKSAVKVSADVLKEYVGYYEGYWRANLRKVTVTLESGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDRGAVIRAEEIHRGGNYVLNRK*
Ga0075302_11567162	3300014269	Natural And Restored Wetlands	EAKQEFWTGSLSDLEKTRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKNGQLHATGLLVKEDVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRTEEIHRGGNYILNRK*
Ga0157380_102734541	3300014326	Switchgrass Rhizosphere	LQKSAVKVSEDVMRKYVGYYEGYWRDNLRKVTVSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKFVMDASGKVVQVEEIHRGGNYILKRQN*
Ga0157380_113750302	3300014326	Switchgrass Rhizosphere	CEAKQEFWTGSVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN*
Ga0157377_106874741	3300014745	Miscanthus Rhizosphere	NVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR*
Ga0157377_107203061	3300014745	Miscanthus Rhizosphere	DLLKQYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDKGAVIRAEEIHRGGNYVLNRKN*
Ga0173480_101225342	3300015200	Soil	EEVCESKMEFWTGNISDLQKSAVKVSEDVMRKYVGYYEGYWRDNLRKVTVSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKFVMDASGKVVQVEEIHRGGNYVLKRQN*
Ga0173480_104642481	3300015200	Soil	KSAVKVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKN*
Ga0163161_110008342	3300017792	Switchgrass Rhizosphere	VSEETMRKYAGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDKGAVIRAEEIHRGGNYVLNRKN
Ga0190274_106427371	3300018476	Soil	DDVLKRYVGYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVIDDKGAVIRAEEIHRGGNYVLNRKN
Ga0193753_100069925	3300020034	Soil	VSDLQKSAVKVSEDVLKQYVGYYEGYWRANLRKVTVTLEGVTLRVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGAVIRTEEIHRGGNYVLNRKGEAAPR
Ga0222622_112182392	3300022756	Groundwater Sediment	SKYVGYYEGYWRANLRKVTMSLKDGALHATGLLVPEAVMLIPESDVVFTSEEGVSYKFVMDASGAVTHVEEIHRGGNYILNRKK
Ga0247753_10277382	3300022892	Soil	TRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR
Ga0247790_100172312	3300022915	Soil	LEKTRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR
Ga0247754_10477082	3300023102	Soil	AKQEFWTGSVSDLEKTRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR
Ga0247762_11701471	3300023169	Plant Litter	WTGSVSDLEKTRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR
Ga0247796_10024911	3300023261	Soil	LEKTRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLDRKGEAAPR
Ga0207682_100905231	3300025893	Miscanthus Rhizosphere	WTGSVSDLEKTRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKGEAALR
Ga0207682_106105171	3300025893	Miscanthus Rhizosphere	RKVTVSLDKGVLHVTGLLLPESVPLIPQSDTIFTSEEGVSYRFVMDASGKVTHAEEIHRGGEYVLKRQK
Ga0207643_101678431	3300025908	Miscanthus Rhizosphere	RANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRAEEIHRGGNYILNRKGEAAPR
Ga0207705_106802042	3300025909	Corn Rhizosphere	VSDEVLKQYVGNYEGYWRANLRKVTVTLEGGTLHVTGLLLPGAVELIPESESVFTTIEGVSYAFIKDATGAVVRAEEIHRGGNYVLNRKP
Ga0207660_113856682	3300025917	Corn Rhizosphere	NLRKVTVSLDKGVLHVTGLLLPESVPLIPQSDTIFTSEEGVSYRFVMDASGKVTHAEEIHRGGEYVLKRQK
Ga0207650_102784871	3300025925	Switchgrass Rhizosphere	ETMRKYAGYYEGYWRANLRKVTMSLEGGALHATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK
Ga0207650_103759541	3300025925	Switchgrass Rhizosphere	GYYEGYWRANLRKVTVTLEGGVLHVTGLLLPGTVELIPESNDLFTTTEGVSYKFVKDDKGAVIRAEEIHRGGNYVLNRKN
Ga0207701_112254361	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SLDKGVLHVTGLLLPESVPLIPQSDTIFTSEEGVSYRFVMDASGKVTHAEEIHRGGEYVLKRQK
Ga0207706_113908992	3300025933	Corn Rhizosphere	WRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK
Ga0207686_118464491	3300025934	Miscanthus Rhizosphere	QEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGTVIRTEEIHRGGNYVLNRKGEAAPR
Ga0207709_114944281	3300025935	Miscanthus Rhizosphere	KQEFWTGNVSDIRKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLESGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFIKDDKGAVIRTEEIHRGGNYVLNRKGEATPR
Ga0207691_106784011	3300025940	Miscanthus Rhizosphere	SSVRVSADVLKQYVGNYEGYWRANLRKVAVTLEGGALHVTGLLLPGTVELIPESESVFTTTEGVSYAFVKDETGTVIRAEEIHRGGNYVLNRKQ
Ga0207668_106381181	3300025972	Switchgrass Rhizosphere	LEKTRVQVPEETMRKYAGYYEGYWRANLRKVTMSLEGGALRATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK
Ga0207678_116206022	3300026067	Corn Rhizosphere	KGRVHVSEETLRKYAGYYEGYWRANLRKVTMSLEGGALHATGLLLSEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK
Ga0207678_118994081	3300026067	Corn Rhizosphere	SEDVLKQYVGSYEGYWRANLRQVKVTLERGTLYVNGLLLPGMVELIPESDDVFTTSEGVSYKFVKGDTGKVIRAEEIHRGGNYILDRKN
Ga0207674_104339232	3300026116	Corn Rhizosphere	VSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKFVMDASGKVAHVEEIHRGGNYVLKRQN
Ga0207675_1007377701	3300026118	Switchgrass Rhizosphere	WRDNLRKVTVSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKFVMDASGKVVQVEEIHRGGNYILKRQT
Ga0209485_11050002	3300027691	Agricultural Soil	WRANLRKVTMSLKDGALHATGLLVPEAVPLIPESDAIFTSEEGVSYKFVMDASGAVTHVEEIHRGGNYVLNRKK
Ga0209814_103182461	3300027873	Populus Rhizosphere	VKSAVTVSEDVLKQYVGYYEGYWRANLRKVTVTLEGGTLRVTGLLLPGSVELIPESDSVFTTTEGVSYKFVMDDSGKVIRTEEIHRGGNYILNRK
Ga0268265_110385612	3300028380	Switchgrass Rhizosphere	GYYEGYWRANLRKVTMSLEGGALRATGLLLPEAVTLIPESDTVFTSEEGVSYKFVMDAGGTVTHVEEIHRGGNYILKRQK
Ga0268264_109043812	3300028381	Switchgrass Rhizosphere	GYYEGYWRANLRKVTVTLENGTLHVTGLLLPGSVELIPESNDVFTTTEGVSYKFVKDDKGAVIRTEEIHRGGNYVLNRKGEAAPR
Ga0247825_108190151	3300028812	Soil	EFWTGSVSDLEKTRVQVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLVPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKGEAAPR
Ga0310888_102316631	3300031538	Soil	NLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK
Ga0310813_121618052	3300031716	Soil	LRKVTVSLESGALHATGLLLPEAVPLIPTSDTTFTSEEGVSYKFVMDASGKVIHVEEIHRGGNYVYKRLK
Ga0310884_102352361	3300031944	Soil	RDNLRKVTVSLEKGALHVTGLLLPESVPLIPASDTIFTSEEGVSYKFVMDASGKVTHAEEIHRGGEYVLKRLK
Ga0308176_102649441	3300031996	Soil	ESKMDFWTGSISDLQKSAVKVSDDVLKQYVGNYEGYWRANLRKVTVTLEGGTLHVTGLLLPGAVELIPESESVFTTIEGVSYAFIKDATGAVVRAEEIHRGGNYVLNRKP
Ga0308176_112908132	3300031996	Soil	VGYYEGYWRANLRKVTVTLEGGTLHVTGLLLPGTVELIPESNAVFTTTEGVSYKFVKDDTGKVIRAEEIHRGGDYILNRK
Ga0307416_1024553461	3300032002	Rhizosphere	RVQVSEETMRKFVGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVVDAGGTVTHVEEIHRGGNYILKRQK
Ga0310899_105568182	3300032017	Soil	TRVQVSEETMRKYVGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK
Ga0310890_100571253	3300032075	Soil	QVSEETMRKYAGYYEGYWRANLRKVTMSLKDGALHATGLLIPEAVPLIPESDTIFTSEEGVSYKFVMDDSGKVIRVEEIHRGGNYVLNRKK
Ga0315910_106244862	3300032144	Soil	TRVQVSEATMQKYVGYYEGYWRANLRKVTMSLKNGQLHATGLLVKEDVPLIPESDTIFTSEEGVSYKFVMDESGKVIRTEEIHRGGNYILNRKN
Ga0335084_108907662	3300033004	Soil	EDVLKQYVGYYEGYWRANLRKVTVTLENGTLHITGLLLPGTVELIPESDDVFTTTEGVSYKFVKDSTGAIIRAEEIHRGGNYVLNRKK
Ga0310810_108570361	3300033412	Soil	GNVSDLQKSAVKVSEDVLKQYVGYYEGYWRANLRKVTVTLEGGTLHVTGLLLPGTVELIPESNDVFTTTEGVSYKFVKDDKGAVIRTEEIHRGGNYILNRKN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101395

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences