Basic Information | |
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Family ID | F101336 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 40 residues |
Representative Sequence | PTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSWQATY |
Number of Associated Samples | 67 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 90.20 % |
Associated GOLD sequencing projects | 65 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.22 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (67.647 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (29.412 % of family members) |
Environment Ontology (ENVO) | Unclassified (82.353 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (80.392 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 15.38% Coil/Unstructured: 84.62% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.22 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Seawater Marine Marine Seawater Marine Methane Seep Mesocosm Hydrothermal Vent Fluids Diffuse Hydrothermal Fluids Hydrothermal Vent Plume Black Smokers Hydrothermal Plume Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPfeb10P162000mDRAFT_10063031 | 3300000186 | Marine | NSFIPTKIALVGEPSLTSVDTFVSKGTAKTSFCGNSWQATY* |
LPaug08P121000mDRAFT_10419852 | 3300000322 | Marine | FIPTKITLVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY* |
KiloMoana_101061051 | 3300001680 | Black Smokers Hydrothermal Plume | TYFIIPTKNALVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY* |
supr60_10388142 | 3300001769 | Hydrothermal Vent Plume | NSFIPTKTALAGEPSLTSVDPFVSKGTAKTSLCGNSTQPTY* |
Ga0066846_102481432 | 3300005429 | Marine | PTKITLVGEPSLTSVDPFVSKGTAKTFFCGNTWQTTYRGSKSQ* |
Ga0066832_101998601 | 3300005597 | Marine | IALVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY* |
Ga0066853_102502122 | 3300005603 | Marine | ITLVGEPSLTSVDPFVSKGTAKTFFCGNSWQATY* |
Ga0066380_100658382 | 3300005948 | Marine | FIPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNSRQATY* |
Ga0066379_102039571 | 3300005951 | Marine | IFKHNSFIPAKNALVGEPSLTSVDPFVSKGTAKTFFCGNSRQATY* |
Ga0066373_101721611 | 3300006011 | Marine | GEPSLTSVDPFVPKGTAKTFFCGNRRQATYRGSKSQQIKIKLKI* |
Ga0081592_10918061 | 3300006076 | Diffuse Hydrothermal Fluids | AKNALVDEPSLTSVDPFASKGTAKTFFCGNSWQTTY* |
Ga0068469_11922351 | 3300006306 | Marine | IPTKIALVGEPSLTSVDPFVSKGTAKIFFCGNCWQTTY* |
Ga0068470_14684791 | 3300006308 | Marine | LSKKIFKHNSFIPTKITLVGEPSLTSVDPFVSKGTAKTSFCGNSQQAIY* |
Ga0068479_12978101 | 3300006309 | Marine | YIFKHNSFIPTKIALVGEPSLTSVDPFVAKGTAKTLLCGNSPQATY* |
Ga0068471_11509461 | 3300006310 | Marine | PTKDALVGEPSLTSVDPSVPKGTAKISFCGNSWQTTY* |
Ga0068471_14369471 | 3300006310 | Marine | IPTNTALVGEPSLTSVDPSVSKGTAKTSLCGNSPQATY* |
Ga0068472_102446311 | 3300006313 | Marine | IALVGEPSLTSVDPFVPKGTAKTFFCGNRWQTTYRGSKSQ* |
Ga0068472_103401031 | 3300006313 | Marine | EPSLTSVAPFVPKGTAKTFFCGNRWQTTYRGSKSQ* |
Ga0068472_103407321 | 3300006313 | Marine | PSTDQIFKHNSFIPTQIALVGEPSLTNVDPFVSKGTAKTSFCVNSWQATY* |
Ga0068472_103479466 | 3300006313 | Marine | IPAKHALVGEPSLTCVDPFVSKGTAKTSLCGNSTQATY* |
Ga0068472_104097261 | 3300006313 | Marine | HNSFIPTKTALVGEPSLTSVDPFVSKGTAKTSLCGNSTQPTY* |
Ga0068472_104257071 | 3300006313 | Marine | PTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSWQATY* |
Ga0068472_104782751 | 3300006313 | Marine | TKITLVGEPSLTSVDPFVSKGTAKTSFCGNSPQATY* |
Ga0068472_105711402 | 3300006313 | Marine | FKHNSFIPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNSRQATY* |
Ga0068472_106874171 | 3300006313 | Marine | IFKHNSFIPAKNALVGEPSLTSVDPFVSKGTAKTFFCGNRWQTTY* |
Ga0068472_107354141 | 3300006313 | Marine | NALVGEPSLTSVDPSVSKGTAKTFFCGNSWQTTY* |
Ga0068472_107407801 | 3300006313 | Marine | HNILTPTNIALVGEPSLTSVDPFVPKGTAKTFFCGNRRQATYRGSKSQ* |
Ga0068472_107614882 | 3300006313 | Marine | PAKNALVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY* |
Ga0068472_107859732 | 3300006313 | Marine | KIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY* |
Ga0068472_111293111 | 3300006313 | Marine | AKNALVGEPSLTSVDPFVSKGTAKTFFCGNSPQATY* |
Ga0068487_13941381 | 3300006315 | Marine | FKHNLSIPTTIALVGEPSLTSVDPFVSKGTAKTYFCGNKQQTTY* |
Ga0068477_11491962 | 3300006326 | Marine | IALVGEPSLTSVDPFVSKGTAKTSFCGNSPQATY* |
Ga0068477_14937562 | 3300006326 | Marine | NALVGEPSLTSVDPFVSKGTAKTSFCVNSWQTTY* |
Ga0068483_12991271 | 3300006330 | Marine | NSLVGEPSLTSVDPFASKGTAKTFFCGNSRQATY* |
Ga0068488_11552171 | 3300006331 | Marine | HNTFIPTKDALVGEPSLTSVDPFVTKGTAKTFFCGNSWQTTY*GSKSQ* |
Ga0068488_15893991 | 3300006331 | Marine | SFIPTKITLVGEPSLTSVDPFVSKDTAKTFFCGNSWQATY* |
Ga0068488_16513221 | 3300006331 | Marine | IIPTTIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY* |
Ga0068488_17122823 | 3300006331 | Marine | KIALVGEPSLTSVDPFVSKGTAKTSFCGNSPQATY* |
Ga0068502_13434691 | 3300006336 | Marine | IPTKNALVGEPSLTSVDPFASKGTAKTSFCGNSWQATY* |
Ga0068481_13250573 | 3300006339 | Marine | FIPTKIALVGEPSLTSVDPFVSKGTAKTYFCGNSQQTTY* |
Ga0068481_13285683 | 3300006339 | Marine | TQIALVGEPSLTSVDPFVSKGTAKTTFCGNSQQTTY* |
Ga0068503_106682032 | 3300006340 | Marine | AKITLVGEPSLTSVDPFVSKGTAKTSFCGNSPQATY* |
Ga0068493_102861221 | 3300006341 | Marine | IIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQATY* |
Ga0068493_103177391 | 3300006341 | Marine | TALVGEPSLTSVDPFVSKDTAKTSLCGNNTQATY* |
Ga0068493_104794331 | 3300006341 | Marine | QTYFLIPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY* |
Ga0068493_105139162 | 3300006341 | Marine | KHNSFIPTKIALVGEHSLTSVDPFVSKGTAKTSFCGNSPQATY* |
Ga0068493_105582012 | 3300006341 | Marine | NALVGEPSLTSVDPFVSKGTAKTSLCGNSTQPTY* |
Ga0068493_105644161 | 3300006341 | Marine | NALVGEPSLTSVDPFVSKGTAKTFFCGNSQQATY* |
Ga0068493_107473812 | 3300006341 | Marine | KNALVDEPSLTSVDPFVSKGTAKTFFCGNSWQTTY* |
Ga0099958_11780232 | 3300006567 | Marine | PAKNALVGEPSLTSVDLFVSKDTAKTSFCGNSWQTTY* |
Ga0066372_104784441 | 3300006902 | Marine | IFKHNSFIPTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSWQTTY* |
Ga0066366_102764111 | 3300007283 | Marine | ALVGEPSLTSVDPFVSKGTAKTFFCGNRWQTIYRGSKSQ* |
Ga0066366_103894941 | 3300007283 | Marine | IPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNRQQTTY* |
Ga0105020_10221971 | 3300007514 | Marine | IFKHNLFIPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNSWEITY* |
Ga0105020_11145741 | 3300007514 | Marine | HNSFIPAKNALVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY* |
Ga0105020_11162723 | 3300007514 | Marine | HNSFIPAKNALVGEPSLTSVDPFVSKGTAKTFFCGNSWQATY* |
Ga0105348_10971042 | 3300008223 | Methane Seep Mesocosm | HNSFIPTKITLVGEPSLTSVDPFVAKGTAKTFFCGNKWQTTY* |
Ga0105349_102659321 | 3300008253 | Methane Seep Mesocosm | FKHNSFIPTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSQQTTYRGSKSQ* |
Ga0117902_14214871 | 3300009104 | Marine | KIALVGEPSLTSVDPFVSKGTAKTYFCGNSQQTTY* |
Ga0114996_105109921 | 3300009173 | Marine | KHNSFIPTKIALVGEPSLTSVDPFVAKGTAKTFFCGNSLQITY* |
Ga0114932_109086802 | 3300009481 | Deep Subsurface | IFPTKIALVGEPSLTSVDPFVSKGTAKTLFCGNTLESTY* |
Ga0114933_102107871 | 3300009703 | Deep Subsurface | ALVGEPSLTSVDPFVSKGTAKTYFCGNNSQTIYRGSKSQQIKIKV* |
Ga0114933_107058752 | 3300009703 | Deep Subsurface | IPAQIALVGEPSLTSVDPFVSKGTAKTSFCGNRQQTTY* |
Ga0114933_109883342 | 3300009703 | Deep Subsurface | KHNSFIPAKIALVGEPSLTSVDPFVPKGTAKTSFCGNSWETTY* |
Ga0115002_107841481 | 3300009706 | Marine | IPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNNWQTTY* |
Ga0114999_104446822 | 3300009786 | Marine | FIPTKIALVGEPSLTSVDPFVAKGTAKTFFCGNSLQITY* |
Ga0133547_102739801 | 3300010883 | Marine | IALVGEPSLTSVDPFVSKGTAKAFVCGNWLQITH* |
Ga0163108_110941351 | 3300012950 | Seawater | IALVGEPSLTSVDPFVSKGTAKTFFCGNRWQTTYRGSKSQ* |
Ga0193025_10114741 | 3300018606 | Marine | IFKHNLFTPTNIALVGEPSLTSVDPFVSKGTAKTSFCGNSPQATY |
Ga0211709_101731441 | 3300020369 | Marine | TKIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY |
Ga0211549_101612401 | 3300020425 | Marine | GEPSLTSVDPFVPKGTAKTFFCGNRWQATYRGSKSQ |
Ga0211549_102079941 | 3300020425 | Marine | TKNALVGEPSLTSVDPFVSKGTAKTSFCGNSWQTTY |
Ga0211548_102042642 | 3300020454 | Marine | IPTTIALVGEPSLTSVDPFVSKGTAKTYFCGNKQQTTY |
Ga0211514_101334651 | 3300020459 | Marine | NSFIPAKIALVGEPSLTSVDPFVSKGTAKTSFCGNRLQTTY |
Ga0211715_100084739 | 3300020476 | Marine | FIPTTIALVGEPSLTSVDPFVSKGTAKTYFCGNKQQTTY |
Ga0211585_102075231 | 3300020477 | Marine | KIALVGEPSLTSVDPFVSKGTAKTFFCGNRGQTTY |
Ga0211503_101623111 | 3300020478 | Marine | TKIALVGEPSLTSVDPFVSKGTAKTFFCGNNWQTTY |
Ga0211503_103132331 | 3300020478 | Marine | TKIALVGEPSLTSVDPFVSKGTAKTFFCGNSRQITY |
Ga0211503_106803621 | 3300020478 | Marine | EPSLTSVDPFVSKGTAKTIFCGNSKQTIYRGSKSQ |
Ga0206686_11698451 | 3300021065 | Seawater | LLNFQTYFIIPTTITLVGEPSLTSVDPFVSKGTAKTFFCGNSWQITY |
Ga0206685_102802012 | 3300021442 | Seawater | IFPTKIALVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY |
Ga0232637_104813731 | 3300021980 | Hydrothermal Vent Fluids | HNSFIPTKIALVGEPSLTSVDTFVFKGTAKTSFCGNSWQATY |
Ga0208832_1010246 | 3300025184 | Deep Ocean | SFIPTKIALVGESSLTSVDTFVSKGTAKTSFYGNSWQATY |
Ga0208206_10396602 | 3300025235 | Deep Ocean | SFIPTKTALVGEPSLTSVDPFVSKGTAKTSLCGNSWQATY |
Ga0208747_10231101 | 3300026074 | Marine | HNSFIPTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSWKTTYSGSKSQ |
Ga0208764_104301381 | 3300026321 | Marine | FIPTKIALVGEPSLTSVDPFVSKGTAKTYFCGNRQQTTY |
Ga0209034_101730101 | 3300027755 | Marine | PTKSALVGEPSLTSVDPFASKGTAKTSLCGNSTQPTY |
Ga0209501_100397206 | 3300027844 | Marine | PTKITLVGEPSLTSVDPFVSKGTAKTSFCGNSQQTTY |
Ga0209501_103488321 | 3300027844 | Marine | FIPTKIALVGEPSLTSVDPFVAKGTAKTFFCGNSLQITY |
Ga0257109_10336351 | 3300028487 | Marine | VGEPSLTSVDPFVPKGTAKTFFCGNRWQTTYRGSKSQ |
Ga0315328_103260022 | 3300031757 | Seawater | KIALAGEPSLTSVDPFASKGTAKTSFCGNSQQATY |
Ga0310121_101424851 | 3300031801 | Marine | NSFIPANNALVGEPSLTSVDLFVSKDTAKTSFCGNSWQTTY |
Ga0310123_101447391 | 3300031802 | Marine | PFIPAKHALVGEPSLTSVDLFVSKDTAKTSFCGNSWQTTY |
Ga0310120_101805643 | 3300031803 | Marine | FIPTKIALVGEPSLTSVDTFVSKGTAKTSFCGNSWQATY |
Ga0310125_101281083 | 3300031811 | Marine | PTKNALVGEPSLTSVDPFVSKGTAKTSFCVNSWQATY |
Ga0315318_103430531 | 3300031886 | Seawater | LFTPTNIALVGEPSLTSVDPFVSKGTAKTFFCGNRWQITYRGSKSQ |
Ga0310344_104630411 | 3300032006 | Seawater | KHNSFIPTKITLVGEPSLTSVDPFVAKGTAKTSFCGNRWQTTY |
Ga0315324_101064802 | 3300032019 | Seawater | KHNSFIPTKIALVGEPSLTSVDPFVSKGTAKTSFCGNSWKTTYSGSKSQ |
Ga0315333_100638243 | 3300032130 | Seawater | VFKHNLFTPTNIALVGEPSLTSVDPFVPKGTAKTFFCGNRWQATYRGSKSQ |
Ga0315336_11049431 | 3300032132 | Seawater | KITLVGEPSLTSVDPFVSKGTAKTFFCGNSWQTTY |
Ga0315334_103141381 | 3300032360 | Seawater | TYFIIPTTITLVGEPSLTSVDPFVSKGTAKTFFCGNSWQITYRGSKSQ |
Ga0315334_117273842 | 3300032360 | Seawater | NLFIPTNIALVGETSLTSVDPFVPKGTAKTFFCGNRWETTYRGSKSQQIKIKLKI |
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