Metagenome / Metatranscriptome Family F101317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	83 residues
Representative Sequence	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYFKPRRLDSYRCIILEYFCTTSCANSWLDDNLESIIDHRGTVEKILEKKIRA
Number of Associated Samples	55
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	13.73 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (91.176 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (60.784 % of family members)
Environment Ontology (ENVO)	Unclassified (94.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.275 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1LP_A_09_P20_500DRAFT_10515992 2JGI24006J15134_1000263123 3JGI24513J20088_10276271 4JGI24514J20073_10067885 5JGI24515J20084_10009465 6JGI25131J35506_10033951 7JGI25131J35506_10033978 8JGI25131J35506_10037084 9JGI25131J35506_10192352 10JGI25131J35506_10238464 11JGI25131J35506_10253092 12JGI25131J35506_10265882 13JGI25131J35506_10306791 14JGI25131J35506_10636311 15JGI25133J35611_100794505 16JGI25136J39404_10125654 17JGI25136J39404_10461131 18JGI25136J39404_10678262 19JGI25136J39404_10923881 20Ga0068501_12140792 21Ga0068502_11652886 22Ga0068502_12121182 23Ga0068502_13259053 24Ga0068502_15150942 25Ga0068482_15387693 26Ga0068482_17512171 27Ga0068482_19006642 28Ga0068482_19114221 29Ga0068503_102295132 30Ga0068503_102400145 31Ga0068503_103964063 32Ga0068503_105226773 33Ga0068503_105543302 34Ga0068503_105948121 35Ga0068503_106577783 36Ga0098058_11363712 37Ga0098040_11911972 38Ga0098054_10562002 39Ga0066376_103669283 40Ga0098053_10643781 41Ga0098057_11568731 42Ga0098036_11028442 43Ga0075444_103832461 44Ga0098064_1249193 45Ga0117901_11327651 46Ga0105217_1136872 47Ga0105173_11002331 48Ga0098043_12003601 49Ga0098061_11605331 50Ga0192992_101657461 51Ga0192992_102246981 52Ga0192992_102385812 53Ga0226832_100124793 54Ga0226832_100764364 55Ga0232635_11400141 56Ga0232646_11337253 57Ga0257022_10721591 58Ga0255047_101535712 59Ga0207900_1025743 60Ga0208670_1179153 61Ga0207889_10045194 62Ga0207901_10298942 63Ga0207902_10120722 64Ga0207902_10256162 65Ga0207902_10311753 66Ga0207898_10094263 67Ga0207906_10148233 68Ga0207906_10479781 69Ga0208012_10360131 70Ga0207887_10114424 71Ga0207887_10151974 72Ga0207887_10244493 73Ga0207887_10280511 74Ga0207887_10765831 75Ga0207896_10483983 76Ga0209349_10208812 77Ga0209644_10058818 78Ga0209644_10066016 79Ga0209644_10080091 80Ga0209644_10089805 81Ga0209644_10114843 82Ga0209644_10328552 83Ga0209644_10571192 84Ga0209644_10887071 85Ga0209644_11400141 86Ga0208919_12572322 87Ga0208299_11503691 88Ga0207893_10145584 89Ga0207908_10349821 90Ga0207895_10767751 91Ga0209757_100402281 92Ga0209757_100515164 93Ga0209757_100775461 94Ga0209757_100792954 95Ga0209757_102271112 96Ga0310345_112336921 97Ga0310345_122017271 98Ga0315334_112289503 99Ga0310342_1008801044 100Ga0310342_1014776091 101Ga0326741_074099_152_415 102Ga0372840_148578_404_661
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1LP_A_09_P20_500DRAFT_10515992 2JGI24006J15134_1000263123 3JGI24514J20073_10067885 4JGI25131J35506_10033951 5JGI25131J35506_10033978 6JGI25131J35506_10037084 7JGI25131J35506_10192352 8JGI25136J39404_10461131 9Ga0066376_103669283 10Ga0117901_11327651 11Ga0098043_12003601 12Ga0098061_11605331 13Ga0192992_102246981 14Ga0209644_10571192 15Ga0209757_100792954
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. 1Ga0098058_11363712 2JGI24006J15134_1000263123 3JGI24514J20073_10067885 4JGI25131J35506_10238464 5JGI25131J35506_10265882 6Ga0068502_15150942 7Ga0068482_15387693 8Ga0068503_102400145 9Ga0068503_103964063 10Ga0068503_105226773 11Ga0068503_105948121 12Ga0098040_11911972 13Ga0098053_10643781 14Ga0075444_103832461 15Ga0105173_11002331 16Ga0098043_12003601 17Ga0192992_102246981 18Ga0192992_102385812 19Ga0226832_100124793 20Ga0226832_100764364 21Ga0232646_11337253 22Ga0255047_101535712 23Ga0207900_1025743 24Ga0208670_1179153 25Ga0207889_10045194 26Ga0207902_10120722 27Ga0207902_10311753 28Ga0207906_10148233 29Ga0207887_10114424 30Ga0207887_10244493 31Ga0207887_10765831 32Ga0209349_10208812 33Ga0209644_10058818 34Ga0209644_10080091 35Ga0209644_10114843 36Ga0209644_10571192 37Ga0209757_100402281 38Ga0209757_100775461 39Ga0310345_122017271 40Ga0315334_112289503 41Ga0310342_1014776091 42Ga0326741_074099_152_415
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.28% β-sheet: 0.00% Coil/Unstructured: 63.72%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF11171	DUF2958	9.80
PF14025	DUF4241	1.96
PF03592	Terminase_2	0.98
PF00902	TatC	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.98
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	8.82 %
Unclassified	root	N/A	91.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.88 %
Unclassified	root	N/A	91.18 %
Viruses	superkingdom	All Organisms → Viruses	2.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.88 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.94 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.94 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.94 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.96 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

Name	Rank	Taxonomy	Distribution
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	2.94 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Unclassified	root	N/A	91.18 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.98 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300024520\|Ga0255047_10153571	Not Available	1177	Open in IMG/M
3300000260\|LP_A_09_P20_500DRAFT_1051599	Not Available	512	Open in IMG/M
3300001450\|JGI24006J15134_10002631	Not Available	9797	Open in IMG/M
3300001720\|JGI24513J20088_1027627	Not Available	585	Open in IMG/M
3300001731\|JGI24514J20073_1006788	Not Available	1388	Open in IMG/M
3300001743\|JGI24515J20084_1000946	Not Available	2448	Open in IMG/M
3300002511\|JGI25131J35506_1003395	Not Available	2293	Open in IMG/M
3300002511\|JGI25131J35506_1003397	Not Available	2292	Open in IMG/M
3300002511\|JGI25131J35506_1003708	All Organisms → Viruses → Predicted Viral	2190	Open in IMG/M
3300002511\|JGI25131J35506_1019235	Not Available	939	Open in IMG/M

Showing 1 to 10 of 102 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.90%
Inlet	Environmental → Aquatic → Marine → Inlet	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Oceanic	Environmental → Aquatic → Marine → Oceanic	87.25%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.90%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	16.67%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.94%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.98%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	70.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.94%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.98%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	2.94%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	60.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	16.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.92%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	0.98%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.96%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.98%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000260	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001720	Marine viral communities from the Pacific Ocean - LP-36	Environmental	Open in IMG/M
3300001731	Marine viral communities from the Pacific Ocean - LP-37	Environmental	Open in IMG/M
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LP_A_09_P20_500DRAFT_10515992	3300000260	Marine	MSEKNICQNPKCCDRTSDDRWNKRIDKFQSRKAYSKSTYHNSIYEYFCTRGCAFCWLSDNLESIIDHRGTVEKILEKKIRA*
JGI24006J15134_1000263123	3300001450	Marine	MTNKNICQNPKCCNNDTKDRWNKKLERYQSRKAYFNTDKSRGNYRYLCKILIYFCTTGCANNWLDDNIESIIDHRGTVEKILDKQIRS*
JGI24513J20088_10276271	3300001720	Marine	MTNKNICQNPKCCNNDTKDRWNKKLERYQSRKAYFNTDKSRGNYRYLCKILIYFCTTGCANNWLDDNIESIIDHRGTV
JGI24514J20073_10067885	3300001731	Marine	MTEKNICQNPKCCDNDTKDRWNKKIDKYQSRKAYYNVRMLDDAHNGYYSKILVYFCTTGCANKWLNDNLQSIIDHRGTIEKILEKKIRA*
JGI24515J20084_10009465	3300001743	Marine	VTDKNICQNPKCCNRDTLDRWNKKIDKYQSRKAYYKPSPEKKYRSVILEYFCTTGCANKWLEDNLESIIDHRGTIEKILEKKIRA*
JGI25131J35506_10033951	3300002511	Marine	MSEKNICQNPKCCNRDTKDRWNKKIERYQSRKAYFRVGNSYGWKVLQYFCTTSCSGRWLEDNLESIIDHRGTIEKILEKKIRP*
JGI25131J35506_10033978	3300002511	Marine	MSEKNICQNPKCCDNNTKDRWNKKIERYQSRKAYFKQGRRNAILEYFCTTRCASRWLSDNIDSIFEHRQSFTKILEKKIRA*
JGI25131J35506_10037084	3300002511	Marine	MSEKNICQNPKCCDRDSNDRWNKKIXKFQSRKAYFKPKKXKDXYQYFCTTYCTHSWLDDNLESIIDHRGTWEKILEKKIRX*
JGI25131J35506_10192352	3300002511	Marine	MSEKNICQNPKCCNRDTKDRWNKKLNAFQSRKAYFSINKIRQEYCSILCYFCTTSCANSWLDDNLESIIDHRGTIEKILEKKIRA*
JGI25131J35506_10238464	3300002511	Marine	MSEKNICQNPKCCDNDTKDRWNKKLERYQSRKAYWKPHRSNSYRCAILEYFCTTRCANSWLDDNLERIVDHRGTWEKILEKKIRA*
JGI25131J35506_10253092	3300002511	Marine	MSEKNICQNPKCCDRDSNDRWNKKIEKFQSRKVRFKSHDEYGRTTLEYFCTTGCAFQWLNNNLESIIDHRGTWEKILEKKIRA*
JGI25131J35506_10265882	3300002511	Marine	MSEKNICQNPKCCXRTSDDRWNKRIDKFQSRKAYHKPKKHKDMYEYFCTTSCTHSWLEDNLERIVDHRGTWEKILEKKIRA*
JGI25131J35506_10306791	3300002511	Marine	MKGIKDMSEKNICQNPKCCDRSSNDRWNKRIDKFQSRKAYHKPQKHKNMYQYFCTTHCTHSWLDDNLESIIDHRGTWEKILEKKIR
JGI25131J35506_10636311	3300002511	Marine	VSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYYXPHRSNSYRCVILEYFCTTSCANSWLXDNLESIXDHRGTIEKILEKKIRA*
JGI25133J35611_100794505	3300002514	Marine	MTEKNICQNPKCCNRDTKDRWNKNIGRYQSRKAYFKVGNSYGWKILQYFCTSSCANSWLEDNLESIIDHRGTIEKI
JGI25136J39404_10125654	3300002760	Marine	MSEKNICQNPKCCDRDSNDRWNKKIEKFQSRKAYFKPKKHKDLYQYFCTTYCTHSWLDDNLESIIDHRGTWEKILEKKIRA*
JGI25136J39404_10461131	3300002760	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYWKPHHSVHYRSAILEYFCTTSCAYSWLDDNLERIVDHRGTWEKILEKKIRA*
JGI25136J39404_10678262	3300002760	Marine	VSEKNICQNPKCCDNTTDDRWNKKIDKFQSRKAYSKSTYHNSIYEYFCTRGCAFCWLSDNLESIIDHRGTIEKILEKKIRA*
JGI25136J39404_10923881	3300002760	Marine	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYYKPHRSNSYRCVILEYFCTTSCANSWLDDNLESIVDHRGTWEKILEKKIRA*
Ga0068501_12140792	3300006325	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFSTNKLRGAYHYFNSILIYFCTTGCANTWLDDNIERIIDHRGTVEKILEKKIRP*
Ga0068502_11652886	3300006336	Marine	MSEKNICQNPKCCNRDTKDRWNKKLNAFQSRKAYFRVGNSYGWKVLQYFCTTSCSGRWLEDNLESIIDHRGTVEKILEKKIRA*
Ga0068502_12121182	3300006336	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFSINKIRQSYCSILCYFCTTSCANKWLDDNLESIIDHRGTVEKILEKKIRP*
Ga0068502_13259053	3300006336	Marine	MSEKNICQNPKCCDNDTKDRWNKKLERYQSRKAYWKPHHSVHYRSAILEYFCTTSCANSWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0068502_15150942	3300006336	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYYKPKDRDGRYRSAILEYFCTTGCANTWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0068482_15387693	3300006338	Marine	MSEKNICQNPKCCDRNSNDRWNKKIDKFQSRKARFKSHDEYGRTTLEYFCTTGCAFQWLNNNLESIIDHRGTWEKILEKKIRA*
Ga0068482_17512171	3300006338	Marine	MSEKNICQNPKCCDRSSNDRWNKRIDKFQSRKAYHKPQKHKNMYQYFCTTHCTHSWLDDNLESIIDHRGTWEKILEKKIRQ*
Ga0068482_19006642	3300006338	Marine	MSEKNICQNPKCCGNDTKDRWNKMLERYQSRKAYWKPHHSEHYRSAILEYFCTTSCANSWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0068482_19114221	3300006338	Marine	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYFPTRYLQETYNTILVYFCTTGCANKWLDDNLESIIDHRGTWQKILEKKIRA*
Ga0068503_102295132	3300006340	Marine	MSEKNICQNPKCCNRDTKDRWNKKIERYQSRKAYYNVKMLDDAHNGYYSKILVYFCTTGCANSWLDNNIESIIDHRGTWEKILEKKIRA*
Ga0068503_102400145	3300006340	Marine	VSEKNICQNPKCCNRNTQDRWNKKIDKFQSRKAYYKPHRSNSYRCVILEYFCTTSCANSWLDDNLESIIDHRGTWQKILEKKIRA*
Ga0068503_103964063	3300006340	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFNVRMLDDAHNGYYSKILVYFCTTGCANKWLNDNLQSIIDHRGTIEKIKQQQQEYLLRK*
Ga0068503_105226773	3300006340	Marine	MSEKNICQNPKCCNRDTLDRWNKKIDKYQSRKAYWKPHHSVHYRSAILEYFCTTSCANSWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0068503_105543302	3300006340	Marine	MSEKNICQNPKCCDRDTKDRWNKKLERYQSRKAYWKPHHSVHYRSAILEYFCTTSCANSWLDDNLESIIDHRGSIEKILEKKIRA*
Ga0068503_105948121	3300006340	Marine	MSEKNICQNPKCCNRDTLDRWNKKIDKYQSRKAYFGTNKLRPYGSVPYCSILCYFSTTGCANTWLEDNLESIIDHRGTVEKILEKKIRA*
Ga0068503_106577783	3300006340	Marine	MSEKNICQNPKCCDRNSNDRWNKKIDKFQSRKAYHKPKKHKNMYQYFCTTHCTHSWLDDNLESIIDHRGTWEKILEKKIRA*
Ga0098058_11363712	3300006750	Marine	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYFKPRRLDSYRCIILEYFCTTSCANSWLDDNLESIIDHRGTVEKILEKKIRA*
Ga0098040_11911972	3300006751	Marine	MTEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFPTRYLQETYNTILVYFCTTGCANKWLDDNLERIIDHRGTVEKILEKKIRA*
Ga0098054_10562002	3300006789	Marine	MTEKNICQNPKCCDNGTKDRWNKNIGRYQSRKAYFKPHGHSYRCVILEYFCTTSCANKWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0066376_103669283	3300006900	Marine	MSEKNICQNPKCCDRDSVDRWNKKIDKYQSRKAYFKSHHEYGGTMLEYFCTTGCANQWLNNNIESIIDHRGTWQKILEKLIRS*
Ga0098053_10643781	3300006923	Marine	MTEKNICQNPKCCDNGTKDRWNKNMGRYQSRKAYFKPHGHSYRCVILEYFCTTSCANKWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0098057_11568731	3300006926	Marine	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYFPTRYLQETYNTILVYFCTTGCANSWLDDNLESIVDHRGTIEKILEKKIRA*
Ga0098036_11028442	3300006929	Marine	MTEKNICQNPKCCNHDTKDRWNKKLNAFQSRKAYFKVGNSYGWKILQYFCTSGCANSWLEDNLESIIDHRGTIEKILEKKIRQ*
Ga0075444_103832461	3300006947	Marine	MSEKNICQNPKCCDYDTNSRWNKKIERYQSRKAYFKSHNEYGGTMLEYFCTTGCANQWLNNNIESIIDHRGTIEKILEKKIRA*
Ga0098064_1249193	3300006988	Marine	MSEKNICQNPKCCNHDSKDRWNKNLNAFQSRKAYFKVGNSYGWKVLQYFCTTGCSIQWLDDNLESIIDHRGTIEKILEKKIRA*
Ga0117901_11327651	3300009103	Marine	MSEKNICQNPKCCNHDSKDRWNKNLNAFQSRKAYFKVGNSYGWKVLQYFCTTRCATKWLDDNLENMIDHRGTVEKI
Ga0105217_1136872	3300009612	Marine Oceanic	MSEKNICQNPKCCDRDTLDRWNKKIDKYQSRKAYFKSHHEYGGTMLEYFCTTGCATQWLNNNIESIIDHRGTWQKILEKLIRS*
Ga0105173_11002331	3300009622	Marine Oceanic	MSEKNICQNPKCCDRDSVDRWNKKIDKYQSRKAYFKSHNEYGSTMLEYFCTTGCATQWLNNNIESIIDHRGTWQKILEKLIRS*
Ga0098043_12003601	3300010148	Marine	MVEKNICQNPKCCNDDTKDRWNKKLERYQSRKAYFKPNHKTRYGYSDSILEYFCTTGCAFEWLRDNLENII
Ga0098061_11605331	3300010151	Marine	KKICQNPKCCNRDTKDRWNKKIDKYQSRKAYFPTRYLQETYNTILVYFCTTGCANSWLDDNLERIIDHRGTWEKILEKKIRA*
Ga0192992_101657461	3300019054	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFPTRYLQETYNTILVYFCTTGCANKWLDDNLERIIDHRGTVEKILEKKIRA
Ga0192992_102246981	3300019054	Marine	MISIRKGIDVTDKNICQNPQCCNRDSNDRWNKKLNVFQSRKAYRKSDNGYFGIYEYFCTTGCAYRWLEDNLESIIDHRGTVEKNIR
Ga0192992_102385812	3300019054	Marine	MSEKNICQNPKCCNGDTKDRWNKKIERYQSRKAYFRVGNSYGWKVLQYFCTTSCSGRWLEDNLESIIDHRGTIEKILEKKIRA
Ga0226832_100124793	3300021791	Hydrothermal Vent Fluids	MSEKNICQNPKCCDNDTKDRWSKKLNAFQSRKAYFSINKIRSDYCTILCYFCTTSCANKWLDDNLESIIDHRGTIEKILEKKIRA
Ga0226832_100764364	3300021791	Hydrothermal Vent Fluids	MSEKNICQNPECCNNDTKDRWNKNLERYQSRKAYFKPHHTTNYGYSCSILEYFCTTGCANKWLEDNLESIIDHRGTIEKILEKKIRA
Ga0232635_11400141	3300021973	Hydrothermal Vent Fluids	MSEKNICQNPKCCDRDSNDRWNKKIDKYQSRKAYFKSHHEYGGTMLEYFCTTGCATQWLNNNIESIIDHRGTWQKILEKLIRS
Ga0232646_11337253	3300021978	Hydrothermal Vent Fluids	VTDKNICQNPKCCDRDSVDRWNKKIERYQSRKAYFKQGRRNAILEYFCTTGCASRWLRDNIDDIFEHRQSFTKILEKLIRS
Ga0257022_10721591	3300023481	Marine	MSEKNICQNPKCCDRDSNDRWNKKIEKFQSRKAYFKPKKHKDMYQYFCTTHCTHSWLDDNLESIIDHRGTWEKILEKKIRQ
(restricted) Ga0255047_101535712	3300024520	Seawater	MSEKNICQNPKCCNNDTKDRWNKKLERYQSRKAYYKPQKPYYMILQYFCTTCCANSWLDDNLESIIDHRGTVEKILDKIIRQ
Ga0207900_1025743	3300025029	Marine	MSEKNICQNPKCCDRDTLDRWNKKTDKYHSRKAYFKSHNEYGSTMLEYFCTTGCAYRWLDDNLESIIDHRGTIEKILEKKIRA
Ga0208670_1179153	3300025038	Marine	MSEKNICQNPKCCNHDSKDRWNKNLNAFQSRKAYFKVGNSYGWKVLQYFCTTGCSIQWLDDNLESIIDHRGTIEKILEKKIRA
Ga0207889_10045194	3300025042	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYYNVKMLDDAHNGFYSKILVYFCTTGCANKWLDDNIESIIDHRGTVEKILEKKIRA
Ga0207901_10298942	3300025045	Marine	MSEKNICQNPKCCDRTSDDRWNKRIDKFQSRKAYSKSTYHNSIYEYFCTRGCAFCWLSDNLESIIDHRGTVEKILEKKIRA
Ga0207902_10120722	3300025046	Marine	MTDKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFSTNKLRGAYHYFNSILIYFCTTGCANKWLDDNIERIIDHRGTVEKILEKKIRA
Ga0207902_10256162	3300025046	Marine	VSEKNICQNPKCCDRTSDDRWNKKIDKFQSRKAYSKSTYHNSIYEYFCTRGCAFCWLSDNLESIIDHRGTIEKILEKKIRA
Ga0207902_10311753	3300025046	Marine	MSEKNICQNPKCCNRDTKDRWNKKIERYQSRKAYFKPHHITKYNYKCSTLEYFCTTSCAYRWLEDNLERIIDHRGTIEKILEKKIRA
Ga0207898_10094263	3300025049	Marine	MSEKNICQNPKCCDRDSNDRWNKKIDKFQSRKARFKSHDEYGRTTLEYFCTTGCAFQWLNNNLESIIDHRGTWEKILEKKIRA
Ga0207906_10148233	3300025052	Marine	MSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYFSTNKLRQTYCSILCYFCTTSCANKWLDDNLESIIDHRGTVEKILDKIIRQ
Ga0207906_10479781	3300025052	Marine	MSEKNICQNPKCCGNDTKDRWNKKIDKYQSRKAYFNVKVLDDAHDGYYSKILVYFCTTGCANKWLDDNLESIIDHRGTIEKILEKKIRA
Ga0208012_10360131	3300025066	Marine	MTEKNICQNPKCCDNGTKDRWNKNMGRYQSRKAYFKPHGHSYRCVILEYFCTTSCANKWLDDNLESIIDHRGTIEKILEKKIRA
Ga0207887_10114424	3300025069	Marine	MSEKNICQNPKCCDNTTDDRWNKKIDKYQSRKAYFKPKGNYVHYRNAILEYFCTRGCAFQWLRDNLESIIDHRGTIEKILEKKIRA
Ga0207887_10151974	3300025069	Marine	GIKDMSEKNICQNPKCCDRNSNDRWNKKIDKFQSRKARFKSHDEYGRTTLEYFCTTGCAFQWLNNNLESIIDHRGTWEKILEKKIRA
Ga0207887_10244493	3300025069	Marine	VTDKNICQNPKCCNRDTLDRWNKKIDKYQSRKAYYKPSPEKKYRSVILEYFCTTGCANKWLEDNLESIIDHRGTIEKILEKKIRA
Ga0207887_10280511	3300025069	Marine	MSEKNICQNPKCCDRDTLDRWNKKTDKYHSRKAYFKSHNEYGSTMLEYFCTTGCANQWLNNNIERIIDHRGTIEKILEKKIRA
Ga0207887_10765831	3300025069	Marine	KNICQNPKCCDNDAIDRWNKKIDKYQSRKASFKVGNHYGWKAMQYFCTTGCANQWLNTNIESIIDHRGTWEKILEKKIRA
Ga0207896_10483983	3300025071	Marine	MTNKNICQNPKCCNNDTKDRWNKKLERYQSRKAYFNTDKSRGNYRYLCKILIYFCTTGCANNWLDDNIESIIDHRGTVEKILDKQIRS
Ga0209349_10208812	3300025112	Marine	MTEKNICQNPKCCNRDTKDRWNKNIGRYQSRKAYFKVGNSYGWKILQYFCTSSCANSWLEDNLESIIDHRGTIEKILEKKIRA
Ga0209644_10058818	3300025125	Marine	VSEKNICQNPKCCDNTTDDRWNKKIDKFQSRKAYSKSTYHNSIYEYFCTRGCAFCWLSDNLESIIDHRGTIEKILEKKIRA
Ga0209644_10066016	3300025125	Marine	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYWKPHHSVHYRSAILEYFCTTSCAYSWLDDNLERIVDHRGTWEKILEKKIRA
Ga0209644_10080091	3300025125	Marine	MSEKNICQNPKCCDNNTKDRWNKKIERYQSRKAYFKQGRRNAILEYFCTTRCASRWLSDNIDSIFEHRQSFTKILEKKIRA
Ga0209644_10089805	3300025125	Marine	MSEKNICQNPKCCNRDTKDRWNKKIERYQSRKAYFRVGNSYGWKVLQYFCTTSCSGRWLEDNLESIIDHRGTIEKILEKKIRP
Ga0209644_10114843	3300025125	Marine	MSEKNICQNPKCCDRDSNDRWNKKIEKFQSRKAYFKPKKHKDLYQYFCTTYCTHSWLDDNLESIIDHRGTWEKILEKKIRQ
Ga0209644_10328552	3300025125	Marine	MSEKNICQNPKCCNRDTKDRWNKKLNAFQSRKAYFSINKIRQEYCSILCYFCTTSCANSWLDDNLESIIDHRGTIEKILEKKIRA
Ga0209644_10571192	3300025125	Marine	MSEKNICQNPKCCEGTSLDRWNKKIKNYQSRKAYRKSHNGYFGMYEYFCTTSCAYRWLDDNLESIIDHRGTIEKILEKKIRA
Ga0209644_10887071	3300025125	Marine	MKGIKDMSEKNICQNPKCCDRSSNDRWNKRIDKFQSRKAYHKPQKHKNMYQYFCTTHCTHSWLDDNLESIIDHRGTWEKILEKKIRA
Ga0209644_11400141	3300025125	Marine	MSEKNICQNPKCCDNDTKDRWNKKLERYQSRKAYWKPHRSNSYRCAILEYFCTTRCANSWLDDNLERIVDHRGTWEKILEKKIRA
Ga0208919_12572322	3300025128	Marine	MTEKNICQNPKCCNHDTKDRWNKKLNAFQSRKAYFKVGNSYGWKILQYFCTSGCANSWLEDNLESIIDHRGTIEKILEKKIRQ
Ga0208299_11503691	3300025133	Marine	MTEKNICQNPKCCDNGTKDRWNKNIGRYQSRKAYFKPHGHSYRCVILEYFCTTSCANKWLDDNLESIIDHRGTIEKILEKKIRA
Ga0207893_10145584	3300025241	Deep Ocean	MSEKNICQNPKCCDRDTLDRWNKKIDKYQSRKAYFKSHNEYGSTMLEYFCTTSCANQWLNNNLESIIDHRGTWQKILEKLIRS
Ga0207908_10349821	3300025244	Deep Ocean	DSNDRWNKKIDKYQSRKAYFKSHHEYGGTMLEYFCTTGCATQWLNNNIESIIDHRGTWQKILEKLIRS
Ga0207895_10767751	3300025260	Deep Ocean	RDSNDRWNKKIDKYQSRKAYFKSHHEYGGTMLEYFCTTGCATQWLNNNIESIIDHRGTWQKILEKLIRS
Ga0209757_100402281	3300025873	Marine	MTEKNICQNPKCCDRSSDDRWNKKIDKFQSRKAYRKSTYHNSIYEYFCTRGCAYSWLEDNLESIIDHRGTIEKILE
Ga0209757_100515164	3300025873	Marine	VSEKNICQNPKCCNRDTKDRWNKKLERYQSRKAYYKPHRSNSYRCVILEYFCTTSCANSWLDDNLESIVDHRGTIEKILEKKIRA
Ga0209757_100775461	3300025873	Marine	MSEKNICQNPKCCDRDTLDRWNKKIDKYQSRKAYFPTRYLQETYNTILVYFCTTGCANKWLDDNLESIIDHRGTWEKILEKKIRA
Ga0209757_100792954	3300025873	Marine	MTEKNICQNPKCCDRSSDDRWNKKIEKFQSRKAYFKPKKHKDLYQYFCTTHCAHSWLDDNLESIIDHR
Ga0209757_102271112	3300025873	Marine	VSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYFSTNKLRGAYHYFNSILIYFCTTGCANKWLDDNIERIIDHRGTVEKILEKKIRA
Ga0310345_112336921	3300032278	Seawater	MSEKNICQNPKCCNRDTKDRWNKKLNAFQSRKAYFRVGNSYGWKVLQYFCTTSCSGRWLEDNLESIIDHRGTIEKILEKKIRA
Ga0310345_122017271	3300032278	Seawater	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYWKPSHRTSWGYRSPILEYFCTTSCANKWLDDNLESIIDHRGTVEKILEKKIRA
Ga0315334_112289503	3300032360	Seawater	VTDKNICQNPKCCGNDTKDRWNKKIERYQSRKAYFKPHRNSYRCVILEYFCTTSCANKWLDDNLESIIDHRGTVEKILEKKIRA
Ga0310342_1008801044	3300032820	Seawater	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYWKPSHRTSWGYRSPILEYFCTTSCANKWLDDNLESII
Ga0310342_1014776091	3300032820	Seawater	MSEKNICQNPKCCDRDTLDRWNKKIDKYQSRKAYFNVKVLDDAHDGYYSKILVYFCTTGCANTWLDDNLQSIIDHRGTVEKILEKKIRA
Ga0326741_074099_152_415	3300034654	Filtered Seawater	MKGIKDMSEKNICQNPKCCDRSSDDRWNKKIDKFQSRKAYHKPKKHKNMYQYFCTTHCTHSWLDDNLESIIDHRGTWQKILEKKIRA
Ga0372840_148578_404_661	3300034695	Seawater	MSEKNICQNPKCCGNDTKDRWNKKLERYQSRKAYYKPHRSNSYRCVILEYFCTTSCANSWLDDNLESIIDHRGTVEKILEKKIRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters