Metagenome / Metatranscriptome Family F101125

Basic Information
Family ID	F101125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	44 residues
Representative Sequence	MSENGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGI
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.00 %
% of genes near scaffold ends (potentially truncated)	24.51 %
% of genes from short scaffolds (< 2000 bps)	21.57 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (97.059 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (43.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.510 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1ErSWdraft_5394980 2JGI12547J11936_10402511 3RCM31_102529674 4JGI25912J50252_100456061 5Ga0063232_101323561 6Ga0068881_10157963 7Ga0070374_106925493 8Ga0049081_100539288 9Ga0078894_107533834 10Ga0070744_102469041 11Ga0075471_102784346 12Ga0070749_106648381 13Ga0075472_100225679 14Ga0102689_10317701 15Ga0102689_17662151 16Ga0114340_12294263 17Ga0114340_12684581 18Ga0114343_10920061 19Ga0114343_11822491 20Ga0114344_12371281 21Ga0114346_13021171 22Ga0114354_11978493 23Ga0114355_11374065 24Ga0114841_10419275 25Ga0114363_10319651 26Ga0114363_10642806 27Ga0114363_12026781 28Ga0114876_10404401 29Ga0110928_10381923 30Ga0104241_10036391 31Ga0114978_100854836 32Ga0114979_104947373 33Ga0129333_109806304 34Ga0129336_103525601 35Ga0129336_104775734 36Ga0151620_11553121 37Ga0102688_16426461 38Ga0153801_10765171 39Ga0157627_10242026 40Ga0157612_12354533 41Ga0157604_12985814 42Ga0157611_11084831 43Ga0157597_11048121 44Ga0157602_11376745 45Ga0129337_14127351 46Ga0129338_14762471 47Ga0157622_11989444 48Ga0181364_10196286 49Ga0208359_10636871 50Ga0194133_101978461 51Ga0222713_101931911 52Ga0255215_10643003 53Ga0256330_10017111 54Ga0256332_11364183 55Ga0255208_10371521 56Ga0256343_10913761 57Ga0256345_10448975 58Ga0255273_10148651 59Ga0255273_10946491 60Ga0255268_10473544 61Ga0255281_11255211 62Ga0255277_11462053 63Ga0255277_11714933 64Ga0255274_10748251 65Ga0255274_11553531 66Ga0255289_10856523 67Ga0255270_11850431 68Ga0255098_10336681 69Ga0208439_10758693 70Ga0255146_10131175 71Ga0255084_10653593 72Ga0255095_10719931 73Ga0255097_10740524 74Ga0255072_10533871 75Ga0209651_11019034 76Ga0208951_10347621 77Ga0208942_11949533 78Ga0209357_11951753 79Ga0208975_10487171 80Ga0209553_10253521 81Ga0209500_100553641 82Ga0209972_102983594 83Ga0209229_102584011 84Ga0209298_100851801 85Ga0247722_101554131 86Ga0255192_10515184 87Ga0255172_10621171 88Ga0256331_11516561 89Ga0255279_10681591 90Ga0315907_103427421 91Ga0315907_106516084 92Ga0315899_104212886 93Ga0315909_102384815 94Ga0315909_102841316 95Ga0315904_102808061 96Ga0315904_105214291 97Ga0315902_104544274 98Ga0315903_111370062 99Ga0335050_0319894_595_729 100Ga0334997_0722651_497_604 101Ga0335013_0202020_3_116 102Ga0335048_0212457_2_136
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1ErSWdraft_5394980 2RCM31_102529674 3Ga0068881_10157963 4Ga0049081_100539288 5Ga0078894_107533834 6Ga0070744_102469041 7Ga0075471_102784346 8Ga0070749_106648381 9Ga0102689_17662151 10Ga0114340_12294263 11Ga0114841_10419275 12Ga0114363_12026781 13Ga0110928_10381923 14Ga0129333_109806304 15Ga0153801_10765171 16Ga0157612_12354533 17Ga0129338_14762471 18Ga0256330_10017111 19Ga0256332_11364183 20Ga0255208_10371521 21Ga0255277_11714933 22Ga0255084_10653593 23Ga0255095_10719931 24Ga0208942_11949533 25Ga0247722_101554131 26Ga0255279_10681591 27Ga0315909_102841316 28Ga0335050_0319894_595_729 29Ga0334997_0722651_497_604 30Ga0335013_0202020_3_116
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38. 1Ga0255274_10748251 2ErSWdraft_5394980 3RCM31_102529674 4Ga0075472_100225679 5Ga0102689_17662151 6Ga0114340_12294263 7Ga0114340_12684581 8Ga0114363_10642806 9Ga0114876_10404401 10Ga0110928_10381923 11Ga0129333_109806304 12Ga0129336_104775734 13Ga0151620_11553121 14Ga0102688_16426461 15Ga0153801_10765171 16Ga0157612_12354533 17Ga0157611_11084831 18Ga0129338_14762471 19Ga0194133_101978461 20Ga0222713_101931911 21Ga0255215_10643003 22Ga0256330_10017111 23Ga0255277_11714933 24Ga0255289_10856523 25Ga0255098_10336681 26Ga0208942_11949533 27Ga0256331_11516561 28Ga0255279_10681591 29Ga0315907_106516084 30Ga0315909_102384815 31Ga0335050_0319894_595_729 32Ga0334997_0722651_497_604 33Ga0335013_0202020_3_116
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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.97% β-sheet: 0.00% Coil/Unstructured: 94.03%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00085	Thioredoxin	2.94
PF09834	DUF2061	0.98
PF01923	Cob_adeno_trans	0.98
PF13640	2OG-FeII_Oxy_3	0.98

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	2.94 %
Unclassified	root	N/A	97.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Viruses	superkingdom	All Organisms → Viruses	2.94 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.94 %
Unclassified	root	N/A	97.06 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.94 %
Unclassified	root	N/A	97.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.94 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.94 %
Unclassified	root	N/A	97.06 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.94 %
Unclassified	root	N/A	97.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %

Scaffold	Taxonomy	Length	IMG/M Link
2035265000\|ErSWdraf_F5BXKTZ02FGMSL	Not Available	510	Open in IMG/M
3300000736\|JGI12547J11936_1040251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	993	Open in IMG/M
3300003412\|JGI25912J50252_10045606	Not Available	1231	Open in IMG/M
3300005418\|Ga0068881_1015796	Not Available	577	Open in IMG/M
3300005581\|Ga0049081_10053928	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1520	Open in IMG/M
3300005662\|Ga0078894_10753383	Not Available	855	Open in IMG/M
3300006484\|Ga0070744_10246904	Not Available	505	Open in IMG/M
3300008119\|Ga0114354_1197849	Not Available	700	Open in IMG/M
3300008510\|Ga0110928_1038192	Not Available	550	Open in IMG/M
3300008953\|Ga0104241_1003639	Not Available	1117	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%
Freshwater	Environmental → Aquatic → Freshwater	88.24%
Marine	Environmental → Aquatic → Marine	10.78%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	7.84%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake	30.39%
Lentic	Environmental → Aquatic → Freshwater → Lentic	20.59%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.96%
River	Environmental → Aquatic → Freshwater → River	25.49%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.39%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	25.49%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	18.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.90%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.98%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.98%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	25.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.78%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.96%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.94%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	11.76%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.98%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.98%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035265000	Freshwater microbial communities from Swedish Lakes - surface of Lake Erken	Environmental	Open in IMG/M
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300005418	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel3S_1000h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M

Showing 1 to 10 of 90 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ErSWdraft_5394980	2035265000	Freshwater	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPRPPTKVRQQI
JGI12547J11936_10402511	3300000736	Freshwater And Sediment	MSENGTGMATPPNNQPSGAVTSQETARKKPTQGKFRSGITTPRPPTKVDTNRH
RCM31_102529674	3300001851	Marine Plankton	MSDGTPAPTPINESSGAVTSQEVGRKKPSQGKFRSGIADQRSM
JGI25912J50252_100456061	3300003412	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGIT
Ga0063232_101323561	3300004054	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPRPPTKVDTN
Ga0068881_10157963	3300005418	Freshwater Lake	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGPRPATKIDTNK
Ga0070374_106925493	3300005517	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPR
Ga0049081_100539288	3300005581	Freshwater Lentic	MDSPPTDQPSGAVTAAEVGRKKPSQGKFRSGIQEKRPIKIDRNRHGIRRETTI
Ga0078894_107533834	3300005662	Freshwater Lake	MATPPNNQPSGAVTSQEAARKNPSQGKFKSGFSSPRPPTKVDTNKHG
Ga0070744_102469041	3300006484	Estuarine	MSDNGTGMDTPPNSQPSGAVTSQEAARKNPSQGKFRS
Ga0075471_102784346	3300006641	Aqueous	MVPPPNSEPSGAVTSQEVGRKKPSQGKFRSGIQDKRSI
Ga0070749_106648381	3300006802	Aqueous	MSDNGTGMATPPNNEPSGAVTSQEVGRKKPSQGKFRSGINDKRTMRVD
Ga0075472_100225679	3300006917	Aqueous	MNNGTGMDTPPNTQPSGAVTSQEATRKNPSQGKFKSGIS
Ga0102689_10317701	3300007304	Freshwater Lake	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGPRPATKIDTNKHGI
Ga0102689_17662151	3300007304	Freshwater Lake	MSNGTGMDTPPNNQPSGAVTSQEVGRKKSSQGKFRSTVQNQRALTRIDTNKHGIRR
Ga0114340_12294263	3300008107	Freshwater, Plankton	MSDINGTGMSAPANNEPAGAVTSREATRKKPQQGKFRSGIQ
Ga0114340_12684581	3300008107	Freshwater, Plankton	LTNGTGMDTPPNNTPSGAVTSQEAGRKSPSQGKFKSGINNQRSLTRIDTNKHGIR
Ga0114343_10920061	3300008110	Freshwater, Plankton	VSDNGTGMATPPNNQPSGAVTSQEAARKNPSQGKFRSGVNGPRPATKIDRN
Ga0114343_11822491	3300008110	Freshwater, Plankton	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGP
Ga0114344_12371281	3300008111	Freshwater, Plankton	MNNGTGMDTPPNNTPSGAVTSQEATRKNPSQGKSKS
Ga0114346_13021171	3300008113	Freshwater, Plankton	MSNNGTGMDTPPNNQPSGAVTSQEATRKNPSQGKFKSGFSGPKPP
Ga0114354_11978493	3300008119	Freshwater, Plankton	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGPRPATKIDTNKH
Ga0114355_11374065	3300008120	Freshwater, Plankton	MSNNGTGMDTPPNNQPSGAVTSQEAARKNPSQGKFRS
Ga0114841_10419275	3300008259	Freshwater, Plankton	MNNGTGMETPPNNQPSGAVTSQEAGRKNPSQGRFKSGISKPAVKIDTNKH
Ga0114363_10319651	3300008266	Freshwater, Plankton	MSNNGTGMDTPPNNQPSGAVTSQEATRKNPSQGKFRSGFSGPRPATKIDTNKHG
Ga0114363_10642806	3300008266	Freshwater, Plankton	VSDNGTGMTTPPNNQPSGAVTSQEAARKNPSQGKFKSGFSGPRPATKIDT
Ga0114363_12026781	3300008266	Freshwater, Plankton	MNNGTGMDTPPNNEPSGAVTSAEATRKKPSQGKFRSGINDRPPMKIDTNRHGI
Ga0114876_10404401	3300008448	Freshwater Lake	MNNGTGMDTPPNNEPSGAVTSAEATRKKPSQGKFRSGINDR
Ga0110928_10381923	3300008510	Water Bodies	MSNGTGMDTPPNNAPAGAVTSQEATRKNPTQGKFK
Ga0104241_10036391	3300008953	Freshwater	VSDNGTGMATPPNTQPSGAVTSQEAARKNPSQGKFRSGVNGPRP
Ga0114978_100854836	3300009159	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGI
Ga0114979_104947373	3300009180	Freshwater Lake	MSENGTGMATPPNNEPAGAVTSQEVGRKKPNQGEFRSGING
Ga0129333_109806304	3300010354	Freshwater To Marine Saline Gradient	MSNGTGMETPPNNTPAGAVTSEEATRKNPSQGKFKSGFKKPPTKIDR
Ga0129336_103525601	3300010370	Freshwater To Marine Saline Gradient	MSNNGTGMDTPPNNTPSGAVTSQEAARKNPSQGRF
Ga0129336_104775734	3300010370	Freshwater To Marine Saline Gradient	MSDNGTGMETPPNSQPSGAVTSQEATRKNPSQNRFRSGVNK
Ga0151620_11553121	3300011268	Freshwater	VSDNGTGMATPPNTQPSGAVTSQEAARKNPSQGKFRSGVNGPRPATKIDRNKHGIRR
Ga0102688_16426461	3300011381	Freshwater Lake	MNNGTGMDTPPNNTPSGAVTSQEATRKNPSQGKFRSGVSGPRPATKIDTNKHGIRR
Ga0153801_10765171	3300012017	Freshwater	MESPPNNEPSGAVTSQEVGRKKPSQGKFRSGVSNQRSMTRIDTNKHGIRRET
Ga0157627_10242026	3300012706	Freshwater	MSDNGTGMDTPPNSEPSGAVTSQEVGRKKPSQGKFHSGPRPPTKIDQN
Ga0157612_12354533	3300012721	Freshwater	MSENGTGMATPPNNEPAGAVTSQEVGRKKPNQGKFRSGINGPRPATKIDTNKHGI
Ga0157604_12985814	3300012723	Freshwater	MSDNGTGMDTPPNSEPSGAVTSQEVGRKKPSQGKFHSG
Ga0157611_11084831	3300012724	Freshwater	MSDNGTGMDTPPNSEPSGAVTSQEVGRKKPSQGKFHSGPRP
Ga0157597_11048121	3300012726	Freshwater	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRS
Ga0157602_11376745	3300012730	Freshwater	MSDNGTGMDTPPNSEPSGAVTSQEVGRKKPSQGKFHSGPRPPTKIDQ
Ga0129337_14127351	3300012968	Aqueous	MNNGTGMDTPPNNQPSGAVTSQEAGRKNPSQGKFK
Ga0129338_14762471	3300012970	Aqueous	MNGTGMDSPPSSEPSGAVTAAEVGRKKPSQGKFRSGIKNDRPAMRIDTNRHGIRRE
Ga0157622_11989444	3300013310	Freshwater	MSDNGTGMDTPPNSEPSGAVTSQEVGRKKPSQGKFHSGPRPPTKIDQNK
Ga0181364_10196286	3300017701	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPRPPTKVDTNK
Ga0208359_10636871	3300020541	Freshwater	MSDNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGPRPA
Ga0194133_101978461	3300021091	Freshwater Lake	MDNNGTGMATPPNSTPSGAVTSQEVGRKKPIQGKFKS
Ga0222713_101931911	3300021962	Estuarine Water	MSNNGTGMDTPPNSQPSGAVTSQEATRKNPSQGKFRSGF
Ga0255215_10643003	3300024278	Freshwater	MNNGTGMDSPPTDQPSGAVTAAEVGRKKPSQGKFRSGIQEKRPIKIDRNRH
Ga0256330_10017111	3300024481	Freshwater	MSENGTGMSTPPNNQPAGAVTSQEVGRKNPSQGKFKSGVGKPA
Ga0256332_11364183	3300024484	Freshwater	MVTPPNNEPSGAVTSDQVGRKKPSQNRFKSGIQDKRSVIIDRNRHG
Ga0255208_10371521	3300024501	Freshwater	MNNGTGMDSPPTDQPSGAVTAAEVGRKKPSQGKFKSGIQE
Ga0256343_10913761	3300024541	Freshwater	MSENGTGMSTPPNNQPAGAVTSQEVGRKNPSQGKFKS
Ga0256345_10448975	3300024552	Freshwater	MVPPPNSEPSGAVTSQEVGRKKPSQGKFRSGIQDKRSIVVDRNRHGIRRETT
Ga0255273_10148651	3300024565	Freshwater	MSNGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGI
Ga0255273_10946491	3300024565	Freshwater	MSNGTGMVPPPNSEPSGAVTSQEVGRKNPSQGKFRSG
Ga0255268_10473544	3300024572	Freshwater	MSNGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGIGKPAV
Ga0255281_11255211	3300024855	Freshwater	MSDNGTGMQTPPNNSPAGAVTSQEVGRKNPSQGKFKSG
Ga0255277_11462053	3300026569	Freshwater	MSENGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGIGKPAV
Ga0255277_11714933	3300026569	Freshwater	MSDNGTGMDTPAVNTPSGAVTSQEAARKNQKQGGFRSGINSGKPSMRIDRNRHGIR
Ga0255274_10748251	3300026570	Freshwater	MSENGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGI
Ga0255274_11553531	3300026570	Freshwater	MVTPPNNEPSGAVTSDQVGRKKPSQNRFKSGIQDKRSVII
Ga0255289_10856523	3300026571	Freshwater	MSDNGTGMQTPPNNSPAGAVTSQEVGRKNPSQGKFKSGIGNKPAVKIDTNKHGIR
Ga0255270_11850431	3300026572	Freshwater	MSENGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSG
Ga0255098_10336681	3300027126	Freshwater	MSENGTGMATPPNNQPSGAVTSQEVERKKPTQGKFKSGFSGPRPPTKVDTN
Ga0208439_10758693	3300027278	Estuarine	MNNGTGMDTPPNNTPSGAVTSQEVGRKNPSQGKFR
Ga0255146_10131175	3300027396	Freshwater	MSENGTGMETPPNNQPSGAVTSQEAGRKNPSQGKFKSGIGKPAVK
Ga0255084_10653593	3300027488	Freshwater	MDTPPNNTPSGAVTSQEATRRNPSQGKFRSGINGPRPATKIDTNKHGIRRET
Ga0255095_10719931	3300027489	Freshwater	MSENGTGMATPPNNQPSGAVTSQEVERKKPTQGKFKSGFSGP
Ga0255097_10740524	3300027491	Freshwater	MNNGTGMDTPPNNTPSGAVTSQEVGRKNPSQGKFRSGVN
Ga0255072_10533871	3300027508	Freshwater	MATPPNNQPSGAVTSQEAARKNPSQGKFRSGVNGPRPATKIDRN
Ga0209651_11019034	3300027581	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPRPPTKVDTNKHGI
Ga0208951_10347621	3300027621	Freshwater Lentic	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKSRSG
Ga0208942_11949533	3300027627	Freshwater Lentic	MSDINGTGMSLPVNTTPSGAVTSEEATRKNPKQSGFRSG
Ga0209357_11951753	3300027656	Freshwater Lake	MSENGTGMATPPNNEPAGAVTSQEVGRKKPNQGKFRSGINGPRPATRVD
Ga0208975_10487171	3300027659	Freshwater Lentic	MNNGTGMDSPPTDQPSGAVTAAEVGRKKPSQGKFRSGIQEKRPIKID
Ga0209553_10253521	3300027688	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSGITTPRPPTKVDTNKHGIR
Ga0209500_100553641	3300027782	Freshwater Lake	MSENGTGMATPPNNQPSGAVTSQEAARKKPTQGKFRSG
Ga0209972_102983594	3300027793	Freshwater Lake	MNNGTGMDTPPNNQPSGAVTSQEAGRKNPSQGKFKS
Ga0209229_102584011	3300027805	Freshwater And Sediment	VSDNGTGMATPPNNQPSGAVTSQEAARKNPSQGKFR
Ga0209298_100851801	3300027973	Freshwater Lake	MSENGTGMATPPNNEPAGAVTSQEVGRKKPNQGKFRSGINGPRPATK
Ga0247722_101554131	3300028027	Deep Subsurface Sediment	MSDDGTGMVTPPNSEPSGAVTSQEVGRKKPSQGKFHSGPRPPTKI
Ga0255192_10515184	3300028067	Freshwater	MNNGTGMDSPPTDQPSGAVTAAEVGRKKPSQGKFKSGIQEKRPIKIDRNR
Ga0255172_10621171	3300028103	Freshwater	MSENGTGMSTPPNNQPAGAVTSQEVGRKNPSQGKFK
Ga0256331_11516561	3300028286	Freshwater	MNDNGTGMVTPPNNEPSGAVTSDQVGRKKPSQNRFKSGIQDKRSVIIDRNRHGIR
Ga0255279_10681591	3300028530	Freshwater	MSNGTGMVPPPNSEPSGAVTSQEVGRKKPSQGKFRSGIQDKRSIVVDRNRHGIR
Ga0315907_103427421	3300031758	Freshwater	MSNGTGMDTPPNNQPSGAVTSQEVGRKKSSQGKFRSTVQNQRALTRIDTN
Ga0315907_106516084	3300031758	Freshwater	MSDNGTGMATPPNNQPSGAVTSQEATRKKPSQGKFKSGTKPLTRIDTNK
Ga0315899_104212886	3300031784	Freshwater	VSDNGTGMATPPNNQPSGAVTSQEAARKNPSQGKF
Ga0315909_102384815	3300031857	Freshwater	MNNNGTGMDTPPNNEPSGAVTSQEVSRKNPSQGKFRSGVQNQRAMTRIDTNKHGIR
Ga0315909_102841316	3300031857	Freshwater	MDTPPNSQPSGAVTAQEATRKNPSQGKFRSGFSGPRPAT
Ga0315904_102808061	3300031951	Freshwater	VSDNGTGMTTPPNNQPSGAVTSQEAARKNPSQGKLRSG
Ga0315904_105214291	3300031951	Freshwater	MSDVNGTGMSAPANNEPAGAVTSREATRKKPQQGKFRSGIQ
Ga0315902_104544274	3300032093	Freshwater	MSNGTGMDTPPNNQPSGAVTSQEVGRKKSSQGKFRSTVQNQRALTRIDTNK
Ga0315903_111370062	3300032116	Freshwater	MSNGTGMVPPPNSEPSGAVTSQEVGRKKPSQGKFRSGIQD
Ga0335050_0319894_595_729	3300034108	Freshwater	MSNNGTGMDTPPNNTPSGAVTSQEAARKNPSQGRFKSGIGAKRPP
Ga0334997_0722651_497_604	3300034280	Freshwater	MSENGTGMATPPVSEPSGAVTSRETPRKYPKQGTRS
Ga0335013_0202020_3_116	3300034284	Freshwater	MSDINGTGMEAPPNPSPAGAVTSREATRKNPKQGLRPG
Ga0335048_0212457_2_136	3300034356	Freshwater	MDTPPNSQPSGAVTSQEATRKNPSQGKFRSGFSGPRPATKIDTNK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences