Basic Information | |
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Family ID | F100979 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 42 residues |
Representative Sequence | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMHEKVN |
Number of Associated Samples | 66 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 7.84 % |
% of genes near scaffold ends (potentially truncated) | 34.31 % |
% of genes from short scaffolds (< 2000 bps) | 64.71 % |
Associated GOLD sequencing projects | 57 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.52 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (37.255 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (46.078 % of family members) |
Environment Ontology (ENVO) | Unclassified (93.137 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (95.098 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.52 |
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Visualization |
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All Organisms unclassified Hyphomonas Unclassified |
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Visualization |
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Marine Seawater Marine Water Marine Surface Seawater Seawater Aqueous Seawater Marine Marine Sediment Seawater Marine Harbor Deep Subsurface Coral |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
KVRMV2_1004385154 | 3300002231 | Marine Sediment | FLKTLSFTSVLVLLLIVALSPLYVTMAIMTRQMAPKVD* |
KVWGV2_101949711 | 3300002242 | Marine Sediment | MIKFAILKALSFTSVLVLLLIVALSPLYVTMAIMTRQMAP |
JGI25127J35165_10032653 | 3300002482 | Marine | MIKFAILRALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKMQEKIN* |
JGI25127J35165_10327931 | 3300002482 | Marine | IKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKIN* |
JGI25128J35275_10016843 | 3300002488 | Marine | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQLNEKVN* |
Ga0051126_106602 | 3300003075 | Coral | MVKLAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKTN* |
Ga0068513_10137883 | 3300004951 | Marine Water | MIKFAILKALSFTSVLVLLLIVALTPLYVTMGIMSRQMTQQKIVD* |
Ga0075462_100064406 | 3300006027 | Aqueous | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQLNEKVN* |
Ga0075462_100467714 | 3300006027 | Aqueous | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQLNEKVN* |
Ga0075462_101525143 | 3300006027 | Aqueous | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN* |
Ga0098038_12699302 | 3300006735 | Marine | MVKFAILKALSLSSVLVLLLIVAISPLYVTMGIMTRQMQETKN* |
Ga0098042_10076313 | 3300006749 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKVD* |
Ga0070750_100827283 | 3300006916 | Aqueous | KFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN* |
Ga0070746_100455813 | 3300006919 | Aqueous | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKIN* |
Ga0098041_10605302 | 3300006928 | Marine | MIKFVILKALSFSSVLVLLLILALSPLYITMGIMTRQMQEKVN* |
Ga0115012_102154492 | 3300009790 | Marine | MMKVVVAKAAAFTSLIVLLLIVTLSPLYVTMGLMTRQIHEKIN* |
Ga0137784_10128294 | 3300010936 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQDKVN* |
Ga0137784_12077724 | 3300010936 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQE* |
Ga0114934_100877752 | 3300011013 | Deep Subsurface | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQMQSDKVN* |
Ga0160422_101495416 | 3300012919 | Seawater | MVKLMILKALSFTSVLVLLLIVALSPLYVTMGIMTRQMTEKTTP* |
Ga0160422_101582604 | 3300012919 | Seawater | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQIHEKVN* |
Ga0160423_100153367 | 3300012920 | Surface Seawater | MIKFAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMHEKVN* |
Ga0160423_101566244 | 3300012920 | Surface Seawater | FVNMIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQMHEKVN* |
Ga0160423_101628771 | 3300012920 | Surface Seawater | NACVIFVNMIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQMHEKVN* |
Ga0160423_101687491 | 3300012920 | Surface Seawater | ALSFSSVLVLLIIVALSPLYVTMGIMTRQMQEKVN* |
Ga0160423_103064853 | 3300012920 | Surface Seawater | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQQKIID* |
Ga0160423_103157613 | 3300012920 | Surface Seawater | MVKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQMQEKTN* |
Ga0160423_107880593 | 3300012920 | Surface Seawater | KALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKIN* |
Ga0163110_109007793 | 3300012928 | Surface Seawater | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQMHEKVN* |
Ga0163180_1000178127 | 3300012952 | Seawater | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQDKVN* |
Ga0163179_101622102 | 3300012953 | Seawater | MVKLAVIKALAFSSVLCLFLILALSPLYVTMGLMTRQMQDKVN* |
Ga0163111_121383332 | 3300012954 | Surface Seawater | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMHEKVN* |
Ga0181426_10086483 | 3300017733 | Seawater | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGMMTRQMQDKVN |
Ga0181433_11448923 | 3300017739 | Seawater | AVIKALSFTSVLVLLLIVALSPLYVTMGLMTRQMTSETK |
Ga0181407_10563322 | 3300017753 | Seawater | MIKFAILKALSFSSVLVLLLIVAISPLYVTMGIMTRQMQDKVN |
Ga0187220_10381603 | 3300017768 | Seawater | MIKEQIARATALMSVLVLLLIVTLSPLYVTMGIMTRQMQDKVN |
Ga0181425_10349922 | 3300017771 | Seawater | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQDKVN |
Ga0211584_100010014 | 3300020248 | Marine | MIKFAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMTEKKL |
Ga0211484_100016033 | 3300020269 | Marine | MIRYAVIKALAFSSVLVLLLIVALSPLYVTMGLMTRQINEKVN |
Ga0211483_100029645 | 3300020281 | Marine | MIKFAILRALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKIN |
Ga0211483_101532661 | 3300020281 | Marine | IKALAFSSVLCLILILALSPLYVTMGIMTRQMHEKIN |
Ga0211621_10031409 | 3300020289 | Marine | KALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKIN |
Ga0211490_10509122 | 3300020297 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQESTR |
Ga0211527_101302681 | 3300020378 | Marine | ALSFTSVLVLLLIVALSPLYVTMGLMTRQMQEKVN |
Ga0211498_100031908 | 3300020380 | Marine | MIKFAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMQESTR |
Ga0211596_101353333 | 3300020384 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMIEKKL |
Ga0211618_101632513 | 3300020393 | Marine | FAIIKALSFTSVLVLLLILALSPLYVTMSLMTRQMTTETK |
Ga0211497_102641341 | 3300020394 | Marine | KALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKVN |
Ga0211583_102161593 | 3300020397 | Marine | ILKALSFSSVLVLLLILALSPLYVTMGLMTRQMQEKVN |
Ga0211617_100103614 | 3300020401 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTIGLMTRQMQEKVN |
Ga0211617_100157114 | 3300020401 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVIMGIMTRQMQEKVN |
Ga0211499_101390933 | 3300020402 | Marine | ILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKIN |
Ga0211472_102230733 | 3300020409 | Marine | MIKIAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN |
Ga0211699_102167663 | 3300020410 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQIQEKIN |
Ga0211699_103217362 | 3300020410 | Marine | MVKFALLKALSFTSVLVLLLIVALSPLYVTMGLMTRQMQEKSR |
Ga0211528_103833143 | 3300020417 | Marine | KFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKVN |
Ga0211557_101177534 | 3300020418 | Marine | AILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKTN |
Ga0211557_101648612 | 3300020418 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQIQEKVN |
Ga0211620_100059494 | 3300020424 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKIN |
Ga0211620_102625212 | 3300020424 | Marine | MIRESIAKALAFTSVLVLLLIVALSPLYVTMSLMTRQLQEKTN |
Ga0211620_103606253 | 3300020424 | Marine | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTKQMIHKSK |
Ga0211556_102082443 | 3300020432 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQEKTN |
Ga0211708_100142061 | 3300020436 | Marine | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQMHEKVN |
Ga0211708_100365511 | 3300020436 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMT |
Ga0211708_101942593 | 3300020436 | Marine | IKFAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMQEKVN |
Ga0211708_104505533 | 3300020436 | Marine | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMT |
Ga0211539_100713001 | 3300020437 | Marine | ILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN |
Ga0211539_101717381 | 3300020437 | Marine | ILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKIN |
Ga0211559_100011232 | 3300020442 | Marine | MIKFTILKALSFSSVLVLLLIVALSPLYVTMGLMTKQMHEKVN |
Ga0211473_100629814 | 3300020451 | Marine | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKTN |
Ga0211473_102335931 | 3300020451 | Marine | RIVKASRIFLMVKLAVIKALAFSSVLCLFLILALSPLYVTMGLMTRQMQHKVN |
Ga0211543_100013294 | 3300020470 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN |
Ga0211614_100097501 | 3300020471 | Marine | FAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMQESTR |
Ga0212024_10375451 | 3300022065 | Aqueous | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQLN |
Ga0224902_1000774 | 3300022066 | Seawater | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQDKVN |
Ga0224906_10116187 | 3300022074 | Seawater | MIKFAILKALSFSSVLVLLLIVTLSPLYVTMGIMTRQMQDKVN |
Ga0224906_11210413 | 3300022074 | Seawater | MVKLAVIKALAFSSVLCLFLILALSPLYVTMGLMTRQMQDKVN |
Ga0208159_10063938 | 3300025101 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKVD |
Ga0208159_10398403 | 3300025101 | Marine | MIKFVILKALSFSSVLVLLLILALSPLYVTMGIMTRQMQEKVN |
Ga0209348_100056112 | 3300025127 | Marine | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN |
Ga0209348_10029062 | 3300025127 | Marine | MIKFAILRALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKVN |
Ga0209232_10123163 | 3300025132 | Marine | MIKFALLKALSFTSVLVLLLIVALSPLYVTMGLMTRQMQEKTN |
Ga0209232_10483781 | 3300025132 | Marine | FAILKALSFSSVLVLLLIVALSPLYVTMGLMTRQMQESSR |
Ga0209232_11613002 | 3300025132 | Marine | MVKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQLNEKVN |
Ga0209645_11095643 | 3300025151 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKLN |
Ga0208899_10016506 | 3300025759 | Aqueous | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGIMTRQLNEKVN |
Ga0208899_11139363 | 3300025759 | Aqueous | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQLNEKVN |
Ga0135227_10048213 | 3300029302 | Marine Harbor | MIKFAILKALSFSSVLVLLFILALSPLYVTMGLMTRQMQEKLK |
Ga0135227_10276991 | 3300029302 | Marine Harbor | LKALSLTSVLVLLLIVALSPLYVTMGLMTRQMQEKVN |
Ga0135226_10178734 | 3300029308 | Marine Harbor | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQMQESTRADRDWE |
Ga0183683_10090946 | 3300029309 | Marine | MVKLLIVKTLAFSSVLCLLLILTLSPLYVITGLMTRQMHEKTN |
Ga0185543_10052101 | 3300029318 | Marine | LKALSFSSVLVLLLIVALSPLYVTMGIMTRQMHEKVN |
Ga0183748_10012854 | 3300029319 | Marine | MMKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTKQMHEKVN |
Ga0183748_10045358 | 3300029319 | Marine | MIKFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQLNEKVN |
Ga0183748_10093491 | 3300029319 | Marine | KFAILKALSFSSVLVLLLIVALSPLYVTMGIMTRQMQEKVN |
Ga0183748_10122737 | 3300029319 | Marine | MIKFAILKALAFSSVLVLLLIVALSPLYVTMGLMTRQMHEKVN |
Ga0183826_10063371 | 3300029792 | Marine | LKALSFTSVLVLLLIVALSPLYVTMGLMTRQMQEKIN |
Ga0183826_10093261 | 3300029792 | Marine | LKALSFTSVLVLLLIVALSPLYVTMGLMTRQMHEKVN |
Ga0183826_10170211 | 3300029792 | Marine | MIKFAILKALSFSSVLVLLLILALSPLYVTMGLMTR |
Ga0183826_10173962 | 3300029792 | Marine | MIKFAILKALSFTSVLVLLLIVALSPLYVTMGLMTRQLHEKVN |
Ga0183826_10391161 | 3300029792 | Marine | KFAILKALSFSSVLVLLLILALSPLYVTMGLMTRQMQEKVN |
Ga0315331_1000531911 | 3300031774 | Seawater | MVKLAVIKALAFSSVLCLFLILALSPLYVTMGLFTRMQMQEKIY |
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