Metagenome Family F100964

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100964
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	44 residues
Representative Sequence	MKTALGLGVMTALLAGVGGIMAVGWAYEGPRRFIRRLRLRKALR
Number of Associated Samples	46
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.17 %
% of genes near scaffold ends (potentially truncated)	30.39 %
% of genes from short scaffolds (< 2000 bps)	72.55 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.706 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (70.588 % of family members)
Environment Ontology (ENVO)	Unclassified (98.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.94% β-sheet: 0.00% Coil/Unstructured: 43.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF10651	BppU_N	4.90
PF00565	SNase	4.90
PF05133	Phage_prot_Gp6	0.98
PF03237	Terminase_6N	0.98
PF05065	Phage_capsid	0.98
PF00476	DNA_pol_A	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.98
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
All Organisms	root	All Organisms	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Viruses	superkingdom	All Organisms → Viruses	23.53 %
cellular organisms	root	All Organisms → cellular organisms	11.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	4.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.92 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.96 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	3.92 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.92 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.96 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.92 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	3.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.98 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.92 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	3.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
uncultured Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium	0.98 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	3.92 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	3.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
uncultured Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium	0.98 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
unclassified Acidithiobacillus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus	3.92 %
uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	3.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
uncultured Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium	0.98 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.61 %
Acidithiobacillus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	3.92 %
uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	3.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.96 %
uncultured Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium	0.98 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001733\|JGI24655J20075_1026264	Not Available	553	Open in IMG/M
3300003539\|FS891DNA_10419939	Not Available	556	Open in IMG/M
3300003690\|PicViral_1003283	All Organisms → Viruses → Predicted Viral	4274	Open in IMG/M
3300006076\|Ga0081592_1121742	Not Available	987	Open in IMG/M
3300006736\|Ga0098033_1160700	Not Available	628	Open in IMG/M
3300006753\|Ga0098039_1324760	Not Available	512	Open in IMG/M
3300008216\|Ga0114898_1008611	All Organisms → Viruses → Predicted Viral	4107	Open in IMG/M
3300008216\|Ga0114898_1038094	All Organisms → Viruses → Predicted Viral	1577	Open in IMG/M
3300008216\|Ga0114898_1070921	Not Available	1076	Open in IMG/M
3300008216\|Ga0114898_1103891	Not Available	848	Open in IMG/M
3300008216\|Ga0114898_1104070	Not Available	847	Open in IMG/M
3300008216\|Ga0114898_1229724	Not Available	504	Open in IMG/M
3300008217\|Ga0114899_1003692	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	7591	Open in IMG/M
3300008217\|Ga0114899_1005999	Not Available	5598	Open in IMG/M
3300008217\|Ga0114899_1009529	All Organisms → Viruses → Predicted Viral	4141	Open in IMG/M
3300008217\|Ga0114899_1015596	Not Available	3037	Open in IMG/M
3300008217\|Ga0114899_1026510	All Organisms → Viruses → Predicted Viral	2194	Open in IMG/M
3300008217\|Ga0114899_1030027	Not Available	2035	Open in IMG/M
3300008217\|Ga0114899_1047163	Not Available	1547	Open in IMG/M
3300008217\|Ga0114899_1162085	Not Available	723	Open in IMG/M
3300008217\|Ga0114899_1243685	Not Available	556	Open in IMG/M
3300008217\|Ga0114899_1254223	Not Available	540	Open in IMG/M
3300008218\|Ga0114904_1003378	All Organisms → cellular organisms → Bacteria	6701	Open in IMG/M
3300008218\|Ga0114904_1020744	Not Available	1932	Open in IMG/M
3300008218\|Ga0114904_1047982	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300008218\|Ga0114904_1079066	Not Available	821	Open in IMG/M
3300008219\|Ga0114905_1010926	All Organisms → Viruses → Predicted Viral	3809	Open in IMG/M
3300008219\|Ga0114905_1016355	All Organisms → Viruses → Predicted Viral	2996	Open in IMG/M
3300008219\|Ga0114905_1018058	All Organisms → Viruses → Predicted Viral	2823	Open in IMG/M
3300008219\|Ga0114905_1178872	Not Available	693	Open in IMG/M
3300008219\|Ga0114905_1211623	Not Available	622	Open in IMG/M
3300008220\|Ga0114910_1104742	Not Available	839	Open in IMG/M
3300008220\|Ga0114910_1150728	Not Available	662	Open in IMG/M
3300009412\|Ga0114903_1064406	Not Available	838	Open in IMG/M
3300009413\|Ga0114902_1012729	All Organisms → Viruses → Predicted Viral	2864	Open in IMG/M
3300009413\|Ga0114902_1111961	Not Available	719	Open in IMG/M
3300009414\|Ga0114909_1010561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	3306	Open in IMG/M
3300009418\|Ga0114908_1016807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	2913	Open in IMG/M
3300009603\|Ga0114911_1099759	Not Available	848	Open in IMG/M
3300009604\|Ga0114901_1242527	Not Available	505	Open in IMG/M
3300009620\|Ga0114912_1065978	Not Available	899	Open in IMG/M
3300009622\|Ga0105173_1027384	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	890	Open in IMG/M
3300009622\|Ga0105173_1028417	Not Available	877	Open in IMG/M
3300009622\|Ga0105173_1078720	Not Available	586	Open in IMG/M
3300009622\|Ga0105173_1079096	Not Available	585	Open in IMG/M
3300009622\|Ga0105173_1107386	Not Available	517	Open in IMG/M
3300009622\|Ga0105173_1116090	Not Available	501	Open in IMG/M
3300017775\|Ga0181432_1024097	Not Available	1593	Open in IMG/M
3300017775\|Ga0181432_1090322	Not Available	904	Open in IMG/M
3300017775\|Ga0181432_1091345	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300017775\|Ga0181432_1145405	Not Available	726	Open in IMG/M
3300025049\|Ga0207898_1015254	Not Available	962	Open in IMG/M
3300025049\|Ga0207898_1023693	Not Available	778	Open in IMG/M
3300025049\|Ga0207898_1029685	Not Available	694	Open in IMG/M
3300025069\|Ga0207887_1085962	Not Available	511	Open in IMG/M
3300025216\|Ga0207883_1029081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	707	Open in IMG/M
3300025251\|Ga0208182_1007628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	3277	Open in IMG/M
3300025251\|Ga0208182_1017625	All Organisms → Viruses → Predicted Viral	1821	Open in IMG/M
3300025257\|Ga0207899_1027217	Not Available	1014	Open in IMG/M
3300025257\|Ga0207899_1045066	Not Available	714	Open in IMG/M
3300025257\|Ga0207899_1068514	Not Available	524	Open in IMG/M
3300025259\|Ga0207876_1016939	All Organisms → Viruses → Predicted Viral	1127	Open in IMG/M
3300025264\|Ga0208029_1004420	All Organisms → Viruses → Predicted Viral	4669	Open in IMG/M
3300025267\|Ga0208179_1010149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → unclassified Acidithiobacillus → Acidithiobacillus sp.	3079	Open in IMG/M
3300025267\|Ga0208179_1024437	All Organisms → Viruses → Predicted Viral	1600	Open in IMG/M
3300025267\|Ga0208179_1041719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	1078	Open in IMG/M
3300025268\|Ga0207894_1035634	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	883	Open in IMG/M
3300025274\|Ga0208183_1004312	All Organisms → Viruses → Predicted Viral	4029	Open in IMG/M
3300025274\|Ga0208183_1017065	Not Available	1689	Open in IMG/M
3300025274\|Ga0208183_1037944	Not Available	1006	Open in IMG/M
3300025274\|Ga0208183_1066974	Not Available	692	Open in IMG/M
3300025277\|Ga0208180_1001805	All Organisms → cellular organisms → Archaea	11415	Open in IMG/M
3300025277\|Ga0208180_1022992	Not Available	1847	Open in IMG/M
3300025277\|Ga0208180_1023693	Not Available	1810	Open in IMG/M
3300025277\|Ga0208180_1044724	Not Available	1167	Open in IMG/M
3300025277\|Ga0208180_1090815	Not Available	695	Open in IMG/M
3300025280\|Ga0208449_1005830	All Organisms → Viruses → Predicted Viral	4867	Open in IMG/M
3300025280\|Ga0208449_1110331	Not Available	638	Open in IMG/M
3300025281\|Ga0207881_1075689	Not Available	517	Open in IMG/M
3300025286\|Ga0208315_1004297	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5813	Open in IMG/M
3300025286\|Ga0208315_1013065	All Organisms → Viruses → Predicted Viral	2817	Open in IMG/M
3300025286\|Ga0208315_1042848	Not Available	1237	Open in IMG/M
3300025286\|Ga0208315_1052882	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300025287\|Ga0207903_1047370	Not Available	771	Open in IMG/M
3300025293\|Ga0208934_1066003	Not Available	640	Open in IMG/M
3300025300\|Ga0208181_1005661	All Organisms → Viruses → Predicted Viral	3889	Open in IMG/M
3300025300\|Ga0208181_1069847	Not Available	698	Open in IMG/M
3300025300\|Ga0208181_1095436	Not Available	572	Open in IMG/M
3300025305\|Ga0208684_1030036	All Organisms → Viruses → Predicted Viral	1618	Open in IMG/M
3300025305\|Ga0208684_1145196	Not Available	559	Open in IMG/M
3300025873\|Ga0209757_10270315	Not Available	540	Open in IMG/M
3300028018\|Ga0256381_1065027	Not Available	543	Open in IMG/M
3300028039\|Ga0256380_1061084	Not Available	556	Open in IMG/M
3300031800\|Ga0310122_10308566	Not Available	696	Open in IMG/M
3300031801\|Ga0310121_10294558	Not Available	953	Open in IMG/M
3300032132\|Ga0315336_1003491	All Organisms → cellular organisms → Archaea	20765	Open in IMG/M
3300032132\|Ga0315336_1022551	Not Available	4152	Open in IMG/M
3300032132\|Ga0315336_1028993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → environmental samples → uncultured Alphaproteobacteria bacterium	3383	Open in IMG/M
3300034654\|Ga0326741_076511	Not Available	552	Open in IMG/M
3300034654\|Ga0326741_087783	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM23-C198	510	Open in IMG/M
3300034655\|Ga0326746_009139	Not Available	913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	85.29%
Strait	Environmental → Aquatic → Marine → Strait	3.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	85.29%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.96%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.96%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.98%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	70.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.86%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	5.88%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.94%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	2.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.96%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.96%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.98%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.98%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001733	Marine viral communities from the Deep Pacific Ocean - MSP112	Environmental	Open in IMG/M
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025216	Marine viral communities from the Deep Pacific Ocean - MSP-109 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025259	Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025287	Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034655	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24655J20075_10262642	3300001733	Deep Ocean	VRHKIRWGKGDGMKTVLGLGLMTAVLAGVGGVLAVGWAYEGPRRFIHRLRLRKALR*
FS891DNA_104199391	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	MKRALGIGLFGALVVGVGSMMAVGWAYEGPRRFVRRLRLRKALR*
PicViral_10032839	3300003690	Marine, Hydrothermal Vent Plume	LGKGGMMKTALGLGLMTAVLAGVGGIMAVGWAYEGPRRFLRRLRLRKALR*
Ga0081592_11217421	3300006076	Diffuse Hydrothermal Fluids	MMRALGLTMLGALVVGVGSVMAVGWAYEGPRRFIRRVKLRKAVR*
Ga0098033_11607001	3300006736	Marine	MRTALGLTMLGAMIAGAGGVMAVGWAYEGPRRFIRRLKLRKALR*
Ga0098039_13247602	3300006753	Marine	MKTALGLGVMTALIAGVGGIMAVGWAYEGPRRFMRRLKLRKALR*
Ga0114898_10086116	3300008216	Deep Ocean	MKTVLGLGVMTALVGVIGAGVAVGWVYEGPRRFVRRLRLRKALR*
Ga0114898_10380942	3300008216	Deep Ocean	MKTALGLGVMTALIAGVGGVLAVGWAYEGPRRFMRRLKLRKALR*
Ga0114898_10709211	3300008216	Deep Ocean	MKRALGLTVLGALVVGVGSVMAIGWAYEGPRRFIRRVKLRKALR*
Ga0114898_11038911	3300008216	Deep Ocean	MKRALGIGLFGALVVGVGSMMAIGWAYEGPRRFIRRVRLRKALR*
Ga0114898_11040703	3300008216	Deep Ocean	LGRGDMMKTALGFGLVTAVLAGVGGIVAVGWAYEGPRRFVRRLRLRKALR*
Ga0114898_12297241	3300008216	Deep Ocean	MKTAIGLGLMTAVVAGVGGIMAVGWAYEGPRRFVRRLRLRK
Ga0114899_100369211	3300008217	Deep Ocean	MKTVIGLGLMTAVVGFVGASMAVGWAYEGPRRFVRRLRLRKALR*
Ga0114899_10059996	3300008217	Deep Ocean	MKMRALGIGVMAAMVGVVGAGMAVGWAYEGPRRFARRLRLRKALR*
Ga0114899_10095292	3300008217	Deep Ocean	MKRAFGIGLMTAVVAGVGGVLAVGWMYEGPRRFARRLRLRKALR*
Ga0114899_10155963	3300008217	Deep Ocean	MVKSREVRMKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFMRRLRLRKALR*
Ga0114899_10265103	3300008217	Deep Ocean	MKTALGFGLVTAVLAGVGGIVAVGWAYEGPRRFVRRLRLRKALR*
Ga0114899_10300272	3300008217	Deep Ocean	MKTALGLGLMTAVVGFVGAGVAVGWAYEGPRRFVRRLRLRKALR*
Ga0114899_10471632	3300008217	Deep Ocean	MKTALGLGVMTALIGVVGAGMAVGWAYEGPRRFIRRLKLRKALR*
Ga0114899_11620851	3300008217	Deep Ocean	MKTALGLGVMTALIAGVGGIMAVGWAYEGPRRFIRRLKLRKALR*
Ga0114899_12436851	3300008217	Deep Ocean	GAVMKTVLGITVLGTVLAAAGGIMAVGWAYEGPRRFMRRLRLRKALR*
Ga0114899_12542232	3300008217	Deep Ocean	MKTALGLGVMTALIAGVGGVLAVGWAYEGPRRFMRRLKLR
Ga0114904_10033782	3300008218	Deep Ocean	MVKSREVRMKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFARRLRLRKALR*
Ga0114904_10207444	3300008218	Deep Ocean	MKTVLGLTMLGAMVAGVGGIMAVGWAYEGPRRFMRRLRLRKALR*
Ga0114904_10479822	3300008218	Deep Ocean	GGTTMKRAFGIGLMTAVVAGVGGVLAVGWMYEGPRRFARRLRLRKALR*
Ga0114904_10790661	3300008218	Deep Ocean	MKTVLGLGLMTALVGVVGAGMAVGWAYEGPRRFARRLRLRRALR*
Ga0114905_101092611	3300008219	Deep Ocean	MTALIAGVGGIMAVGWAYEGPRRFARRLRLRKALR*
Ga0114905_10163552	3300008219	Deep Ocean	MKTALGFGLVTAMLAVVGGIVAVGWAYEGPRRFVRRLRLRKALR*
Ga0114905_10180583	3300008219	Deep Ocean	MKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFARRLRLRKALR*
Ga0114905_11788724	3300008219	Deep Ocean	MKTAIGLGLMTAVVAGVGGIMAVGWAYEGPRRFVRRLRLRKALR*
Ga0114905_12116231	3300008219	Deep Ocean	MKTVLGLGLMTALVGVVGAGMAVGWAYEGPRRFARRLRLRKALR*
Ga0114910_11047422	3300008220	Deep Ocean	MKTALGLGVMTALLAGVGGVLAVGWAYEGPRRFMRRLKLRKALR*
Ga0114910_11507281	3300008220	Deep Ocean	MKTALGLTMLGAMIAGVGGIMAVGWAYEGPRRFIRRLRLRKALR*
Ga0114903_10644063	3300009412	Deep Ocean	MKTALGLGVMTALLAGVGGIMAVGWAYEGPRRFIRRLRLRKALR*
Ga0114902_10127299	3300009413	Deep Ocean	MKRALGLGLMTAVVAGVSGALMIGWAYEGPRRFVRRLRLRKALR*
Ga0114902_11119611	3300009413	Deep Ocean	MKRAFGIGLMTAVVAGVGGVLAVGWMYEGPRRFARRLRLRK
Ga0114909_10105612	3300009414	Deep Ocean	MWVLRPENSVAQSREVQMKRALGLTVLGALVVGVGSVMAVGWAYEGPRRFIHRLRLRKALR*
Ga0114908_10168071	3300009418	Deep Ocean	MKRALGLTVLGALVVGVGSVMAVGWAYEGPRRFIHRLRLRKALR*
Ga0114908_11034744	3300009418	Deep Ocean	GTVLAAAGGIMAVGWAYEGPRRFVRRLRLRKALR*
Ga0114911_10997591	3300009603	Deep Ocean	VATSREVQMKTAIGLGLMTAVVAGVGGIMAVGWAYEGPKRFVRRLRLRKALR*
Ga0114901_12425271	3300009604	Deep Ocean	MKTVLGLTMLGTVIAAAGGVMAVGWAYEGPRRFMRRLRLRKALR*
Ga0114912_10659781	3300009620	Deep Ocean	MKRALGLTVLGALVVGVGSVMAVGWAYEGPRRFVRRLRLRKALR*
Ga0105173_10273843	3300009622	Marine Oceanic	GMMKTALGLGLMTAVLAGVGGIMAVGWAYEGPRRFLRRLRLRKALR*
Ga0105173_10284171	3300009622	Marine Oceanic	MKTVLGLGVMTALIAGVGGVLAVGWAYEGPRRFIHRLRLRKALR*
Ga0105173_10787202	3300009622	Marine Oceanic	MMKTALGLGLMTAVLAGVGGIMAVGWAYEGPRRFLRRLRLRK
Ga0105173_10790961	3300009622	Marine Oceanic	MKAALGLGMMTALLAGVGGVLAVGWVYEGPRRFIHRLRLRKALR*
Ga0105173_11073861	3300009622	Marine Oceanic	MKTALGLGVMTALLGVVGAGMAVGWAYEGPRRFIRRLKLRKALR*
Ga0105173_11160902	3300009622	Marine Oceanic	MKRALGLGLFGALVAGVGATLAVGWAYEGPRRFFRRVRLRKALR*
Ga0181432_10240972	3300017775	Seawater	MKTALGLGVMTALLGVVGAGMAVGWAYEGPRRFIRRLRLRKALR
Ga0181432_10903223	3300017775	Seawater	MKTVLGVTVLGAMLAGVGGVMAVGWAYEGPRRFMRRLKLRKALR
Ga0181432_10913453	3300017775	Seawater	LSRPYTVAKNREVHMKTALGFGMMTALVAGVGGIMAVGWMYEGPRRFARRLRLRKALR
Ga0181432_11454053	3300017775	Seawater	MKTALGLGMMTALLAGVGGVVAVGWAYEGPRRFMRRLKLRKAL
Ga0207898_10152543	3300025049	Marine	MKTALGLGLMTALVVGVGSMMAVGWAYEGPKRFVRRLRLRKALR
Ga0207898_10236931	3300025049	Marine	MRWGIGDGMKTVLGLGVMTALFAGVGGIMAVGWAYEGPRRFI
Ga0207898_10296851	3300025049	Marine	MKRALGLTMLGALVVGVGSVVAVGWAYEGPKRFVRRLRLRK
Ga0207887_10859622	3300025069	Marine	MKRALGIGLFGALVVGVGSMMAVGWAYEGPRRFVRRLRLRKALR
Ga0207883_10290811	3300025216	Deep Ocean	MMMRALGLTVLGALVVSVGSVMAVGWAYEGPRRFIHRLRLRKA
Ga0208182_10076282	3300025251	Deep Ocean	MWVLRPENSVAQSREVQMKRALGLTVLGALVVGVGSVMAVGWAYEGPRRFIHRLRLRKAL
Ga0208182_10176252	3300025251	Deep Ocean	MKTVLGLTMLGAMVAGVGGIMAVGWAYEGPRRFMRRLRLRKALR
Ga0207899_10272171	3300025257	Deep Ocean	MKTALGFGLMTAVFAGAGGIMAVGWAYEGPRKFFRRLRLRKALR
Ga0207899_10450662	3300025257	Deep Ocean	MMRALGLGLFGALVVGVGSMMAVGWAYEGPRRFIRRVRLRRALR
Ga0207899_10685141	3300025257	Deep Ocean	MKAALGLTMLGAMIAGATSVAVMGWAYEGPRRFIHRLRLRKALR
Ga0207876_10169393	3300025259	Deep Ocean	MKRALGLGLMTAVVAGVSGALMIGWAYEGPMRFIRRVKLRKALR
Ga0208029_10044207	3300025264	Deep Ocean	VLGALVVGVGSVMAIGWAYEGPRRFIRRVRLRKALR
Ga0208179_10101492	3300025267	Deep Ocean	MKRALGLTVLGALVVGVGSVMAIGWAYEGPRRFIRRVKLRKALR
Ga0208179_10244372	3300025267	Deep Ocean	MKTALGLGVMTALIAGVGGVLAVGWAYEGPRRFMRRLKLRKALR
Ga0208179_10417191	3300025267	Deep Ocean	MKTVLGLGVMTALVGVIGAGVAVGWVYEGPRRFVRRLRLRKALR
Ga0207894_10356342	3300025268	Deep Ocean	MKTVLGLGVMTALVGVVGAGMAVGWAYEGPRRFMRRLRLR
Ga0208183_10043129	3300025274	Deep Ocean	MKRALGLGLMTAVVAGVSGALMIGWAYEGPRRFVRRLRLRKALR
Ga0208183_10170652	3300025274	Deep Ocean	MKTALGLGVMTALLAGVGGVLAVGWAYEGPRRFMRRLKLRKALR
Ga0208183_10379442	3300025274	Deep Ocean	MKRALGLTVLGALVLSVGSVMAVGWAYEGPRRFLRRLKLRKALR
Ga0208183_10669742	3300025274	Deep Ocean	MKTALGLTMLGAMIAGVGGIMAVGWAYEGPRRFIRRLRLRKALR
Ga0208180_10018054	3300025277	Deep Ocean	MKTALGLGVMTALIGVVGAGMAVGWAYEGPRRFIRRLKLRKALR
Ga0208180_10229926	3300025277	Deep Ocean	SREVRMKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFARRLRLRKALR
Ga0208180_10236935	3300025277	Deep Ocean	MKTVIGLGLMTAVVGFVGASMAVGWAYEGPRRFVRRLR
Ga0208180_10447241	3300025277	Deep Ocean	MKMRALGIGVMAAMVGVVGAGMAVGWAYEGPRRFARRLRLRKALR
Ga0208180_10908152	3300025277	Deep Ocean	MKTVLGLGVMTALVGVIGAGVAVGWAYEGPRRFMRRLRLRKALR
Ga0208449_10058308	3300025280	Deep Ocean	MKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFARRLRLRKALR
Ga0208449_11103312	3300025280	Deep Ocean	MKTALGLTMLGAMIAGVGGIMAVGWAYEGPRRFIRRLRLRK
Ga0207881_10756891	3300025281	Deep Ocean	VLGALVVGVGSVVAVGWAYEGPRRFFRRVKLRKALR
Ga0208315_100429711	3300025286	Deep Ocean	MKTVIGLGLMTAVVGFVGASMAVGWAYEGPRRFVRRLRLRKALR
Ga0208315_10130652	3300025286	Deep Ocean	MKRAFGIGLMTAVVAGVGGVLAVGWMYEGPRRFARRLRLRKALR
Ga0208315_10428483	3300025286	Deep Ocean	MKTVLGLGIMTALVAGVGGIMAVGWAYEGPRRFARR
Ga0208315_10528821	3300025286	Deep Ocean	MKTALGLGVMTALIAGVGGVLTVGWVYEGPRRFIRRLRLRKALR
Ga0207903_10473703	3300025287	Deep Ocean	KTVLGITVLGTMLAAAGGVMAVGWVYEGPRRFMRRLRLRKALR
Ga0208934_10660032	3300025293	Deep Ocean	MKTAIGLGLMTAVVAGVGGIMAVGWAYEGPRRFVRRLRLRKALR
Ga0208181_10056611	3300025300	Deep Ocean	MKRALGLTVLGALVVGVGSVMAIGWAYEGPRRFIRRVKLR
Ga0208181_10698471	3300025300	Deep Ocean	DKGAVMKTALGLGVMTALIAGVGGIMAVGWAYEGPRRFIRRLKLRKALR
Ga0208181_10954361	3300025300	Deep Ocean	VQMKTVLGLGLMTALVGVVGAGMAVGWAYEGPRRFMRRLKLRKALR
Ga0208684_10300362	3300025305	Deep Ocean	MKTALGLGVMTALIAGVGGIMAVGWAYEGPRRFARRLRLRKALR
Ga0208684_11451962	3300025305	Deep Ocean	MKTVLGLGLMTALVGVVGAGMAVGWAYEGPRRFARRLRLRRAL
Ga0209757_102703154	3300025873	Marine	LTMLGALVVSVGSVMAVGWAYEGPRRFIHRLRLRRALR
Ga0256381_10650271	3300028018	Seawater	VEGAMKRALGLTVLGALVVGVGSVMAVGWAYEGPRRFVRRLKLRK
Ga0256380_10610841	3300028039	Seawater	MKRALGLTVLGALVVGVGSVMAIGWAYEGPRRFIRRVRLRKALR
Ga0310122_103085661	3300031800	Marine	MKTALGLGMMTAILAGVGGILAVGWAYEGPRRFLHRLRLRKALR
Ga0310121_102945584	3300031801	Marine	GAMMRAVLGVTVFGALLAGVGGIMAVGWAYEGPRRFIHRLRLRKALR
Ga0315336_100349117	3300032132	Seawater	MKTVLGLGVMTALVGVVGAGMAVGWAYEGPRRFMRRLKLRKALR
Ga0315336_10225513	3300032132	Seawater	MKTALGITVIGTMLAAAGGVMAVGWAYEGPRRFMRRLKLRKALR
Ga0315336_10289937	3300032132	Seawater	MKTALGLGLMTAVLAGVGGIMAVGWAYEGPRRFVRRLKLRKALR
Ga0326741_076511_439_552	3300034654	Filtered Seawater	MRTVLGVTVFGALLAGVGGIMAVGWAYEGPRRFLRRLK
Ga0326741_087783_154_288	3300034654	Filtered Seawater	MKTVLGITVLGTMIAAAGGIVAVGWAYEGPRRFLRRLKLRKALR
Ga0326746_009139_514_648	3300034655	Filtered Seawater	MKTVLGLGVMTALLAGVGGVLAVGWAYEGPRRFLHRLRLRKALR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences