Metagenome Family F100897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100897
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	68 residues
Representative Sequence	MRARILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGST
Number of Associated Samples	79
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.49 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	89.22 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.137 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.392 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.765 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.62% β-sheet: 0.00% Coil/Unstructured: 34.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04255	DUF433	2.94
PF13474	SnoaL_3	1.96
PF12779	WXXGXW	1.96
PF08240	ADH_N	1.96
PF07732	Cu-oxidase_3	0.98
PF07963	N_methyl	0.98
PF07593	UnbV_ASPIC	0.98
PF07690	MFS_1	0.98
PF01977	UbiD	0.98
PF12704	MacB_PCD	0.98
PF01872	RibD_C	0.98
PF13358	DDE_3	0.98
PF13371	TPR_9	0.98
PF13414	TPR_11	0.98
PF01906	YbjQ_1	0.98
PF13431	TPR_17	0.98
PF05163	DinB	0.98
PF01717	Meth_synt_2	0.98
PF02371	Transposase_20	0.98
PF07238	PilZ	0.98
PF08922	DUF1905	0.98
PF13472	Lipase_GDSL_2	0.98
PF07090	GATase1_like	0.98
PF13432	TPR_16	0.98
PF00072	Response_reg	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.94
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.98
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.98
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.98
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.98
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.98
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.98
COG5426	Uncharacterized protein STM3548, contains class I glutamine amidotransferase domain	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.10 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.10 %
Unclassified	root	N/A	4.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.14 %
Unclassified	root	N/A	4.90 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.49 %
Unclassified	root	N/A	4.90 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.82 %
Unclassified	root	N/A	4.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.92 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.82 %
Unclassified	root	N/A	4.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.94 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.82 %
Unclassified	root	N/A	4.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.82 %
Unclassified	root	N/A	4.90 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.96 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10345052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300004633\|Ga0066395_10410968	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005175\|Ga0066673_10777963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005176\|Ga0066679_10644689	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005332\|Ga0066388_104872409	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005447\|Ga0066689_10636957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300005540\|Ga0066697_10004654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6570	Open in IMG/M
3300005553\|Ga0066695_10111583	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005555\|Ga0066692_10682370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300005586\|Ga0066691_10602275	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	653	Open in IMG/M
3300005586\|Ga0066691_10701878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005587\|Ga0066654_10010083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3492	Open in IMG/M
3300006046\|Ga0066652_100207237	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300006046\|Ga0066652_101473788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006102\|Ga0075015_100539861	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300006755\|Ga0079222_11527997	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300006797\|Ga0066659_10027367	All Organisms → cellular organisms → Bacteria	3363	Open in IMG/M
3300006797\|Ga0066659_10827916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300006804\|Ga0079221_10166472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300006804\|Ga0079221_11006355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300006806\|Ga0079220_10185372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300006806\|Ga0079220_10282786	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006806\|Ga0079220_10659013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300007076\|Ga0075435_102070646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009137\|Ga0066709_104500697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300009143\|Ga0099792_10455856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300009143\|Ga0099792_10994603	Not Available	560	Open in IMG/M
3300010326\|Ga0134065_10233009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010360\|Ga0126372_13218815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300011269\|Ga0137392_11550754	Not Available	521	Open in IMG/M
3300011271\|Ga0137393_10038760	All Organisms → cellular organisms → Bacteria → Acidobacteria	3663	Open in IMG/M
3300012198\|Ga0137364_10552649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300012202\|Ga0137363_10830159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300012203\|Ga0137399_11514011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012206\|Ga0137380_10338984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300012208\|Ga0137376_10576528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300012208\|Ga0137376_10794626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300012285\|Ga0137370_10686447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300012285\|Ga0137370_11036928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012349\|Ga0137387_10339388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300012349\|Ga0137387_11259166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012361\|Ga0137360_10395020	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300012582\|Ga0137358_10096541	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300012683\|Ga0137398_10360141	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	986	Open in IMG/M
3300012683\|Ga0137398_10964126	Not Available	592	Open in IMG/M
3300012917\|Ga0137395_10323580	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012924\|Ga0137413_10542888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300012924\|Ga0137413_11540839	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012925\|Ga0137419_11347284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300012927\|Ga0137416_10985946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300012930\|Ga0137407_10333711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300012975\|Ga0134110_10463005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300012977\|Ga0134087_10173373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300014150\|Ga0134081_10119317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300014166\|Ga0134079_10336112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300014166\|Ga0134079_10409860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300015242\|Ga0137412_10107504	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300015245\|Ga0137409_10482461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300018431\|Ga0066655_10000054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28425	Open in IMG/M
3300018482\|Ga0066669_10741792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300018482\|Ga0066669_12375461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300021168\|Ga0210406_10201349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300021170\|Ga0210400_10071366	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300021404\|Ga0210389_11447441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300021478\|Ga0210402_10801353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300021478\|Ga0210402_11055483	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300021559\|Ga0210409_10812961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300021560\|Ga0126371_10943524	Not Available	1006	Open in IMG/M
3300021560\|Ga0126371_13073314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300021560\|Ga0126371_13250508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300021560\|Ga0126371_13253673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300024251\|Ga0247679_1065750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300024331\|Ga0247668_1113108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300025916\|Ga0207663_10691545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300025928\|Ga0207700_11946706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300026305\|Ga0209688_1095990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026308\|Ga0209265_1000671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	9741	Open in IMG/M
3300026310\|Ga0209239_1216091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300026316\|Ga0209155_1006660	All Organisms → cellular organisms → Bacteria	5139	Open in IMG/M
3300026320\|Ga0209131_1214691	Not Available	862	Open in IMG/M
3300026328\|Ga0209802_1323633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300026335\|Ga0209804_1341031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026356\|Ga0257150_1004748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1808	Open in IMG/M
3300026551\|Ga0209648_10078884	All Organisms → cellular organisms → Bacteria	2753	Open in IMG/M
3300026551\|Ga0209648_10415810	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300026551\|Ga0209648_10486585	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300026551\|Ga0209648_10819884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300026552\|Ga0209577_10422376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300026557\|Ga0179587_10616926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300027439\|Ga0209332_1097730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300027725\|Ga0209178_1119523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300027787\|Ga0209074_10383017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300027787\|Ga0209074_10500839	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300027846\|Ga0209180_10074648	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300027862\|Ga0209701_10238892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300028146\|Ga0247682_1017595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300028536\|Ga0137415_10100054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2752	Open in IMG/M
3300028536\|Ga0137415_10579370	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300031231\|Ga0170824_127386304	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300031754\|Ga0307475_10267710	All Organisms → cellular organisms → Bacteria → Acidobacteria	1370	Open in IMG/M
3300031823\|Ga0307478_11504467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031962\|Ga0307479_11047648	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.04%
Aquatic	Environmental → Aquatic	0.98%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.04%
Sediment	Environmental → Aquatic → Sediment	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.20%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103450522	3300001867	Forest Soil	MRALIFSTLVLCLLASSAVRDLAQEKPDVASIRALELKWVDAYKQRQIAAVATLLAEDYVITLEDCSTYGKVGFISYNAGPLHV
Ga0066395_104109681	3300004633	Tropical Forest Soil	MRARIFSALALCLHGCFAVRNLAQEKPDAAAIRALESKWVDAYKQRQITTVASLLADDYV
Ga0066673_107779631	3300005175	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITVEDGTTYGKVGFISYNA
Ga0066679_106446891	3300005176	Soil	MRVRIFSALSLCLLGSLAIRVCAQEKPDAATIRALESKWVDAYKQRQIATVASLLADDYVITLE
Ga0066388_1048724091	3300005332	Tropical Forest Soil	MRARIFPTVTLCLLAFSALRALAQDKPDVAIVRELESKWVDAYKQRQIATVASLLADDYVITVEDGTTYGKVGF
Ga0066689_106369571	3300005447	Soil	MRARILSALVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFI
Ga0066697_100046547	3300005540	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITVEDGTT*
Ga0066695_101115831	3300005553	Soil	MRARTFSILILCLLGCFAVRDVAQEKPDVASIRALESKWVDAYKRRQIAEVAALLAEDYVITLEDGSTYGKVGF
Ga0066692_106823702	3300005555	Soil	MRTLILSTSILCLLGCVAVRDLAQEKSDVATIRALELKWVDAYKQRQIAA
Ga0066691_106022752	3300005586	Soil	MRAQILSTLALCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAV
Ga0066691_107018781	3300005586	Soil	MRARILSALVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAV
Ga0066654_100100831	3300005587	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITVEDGTTYGKVGFISYNAG
Ga0066652_1002072373	3300006046	Soil	MRARTFSILILCLLGCFAVRDVAQEKPDVASIRALESKWVDAYKRRQIAEVAALLAEDYV
Ga0066652_1014737882	3300006046	Soil	MRARILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGST
Ga0075015_1005398611	3300006102	Watersheds	MRARIFSTLALGLLGFLAVRNLAQEKSDAASIRTLELKWVDAYKQRQI
Ga0079222_115279972	3300006755	Agricultural Soil	MRVRIFSGLSLCLLASLAIRVSAQEKSDAAAVRALESKWVDAYKQRQIATVASLLSDDYVITLEDGSTYGKVGFISYNAGS
Ga0066659_100273676	3300006797	Soil	MRARILSALVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTY
Ga0066659_108279161	3300006797	Soil	MRAQILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTY
Ga0079221_101664722	3300006804	Agricultural Soil	MRVRIFSGLSLCLLASLAIRVSAQEKSDATTVRALESKWVDAYKQRQIATVASLLSDDYVITLEDGSTYGKVGFISYNAGS
Ga0079221_110063551	3300006804	Agricultural Soil	MRTRILSTLVLCLLGCFAVRNAAQEKSDVASIRTLEFKWV
Ga0079220_101853721	3300006806	Agricultural Soil	MRARMFSTLLYLLGCFAVSNLAQEKSDAANIRALESRWVDAYKQRQIDTVASLLAEDYVITLGDGSTYGKVGFISYNAGSLRVDGRQDTHAR*
Ga0079220_102827862	3300006806	Agricultural Soil	MRVRMFSALSLCLLGSLAIRVSAQEKSDAATIRALESKWVDAYKQRQIATVASLLADDYVITLEDGTTYGKVGFISYNAGSLRVDVAE
Ga0079220_106590132	3300006806	Agricultural Soil	MRALTFSTFILCLLGCFAARDLAQDKSQDKSPDKSDVATVRALESKWVDAYKERQIAAVASLLADDYVITLEDGNTFGKV
Ga0075435_1020706461	3300007076	Populus Rhizosphere	MRVRIFSALSLCLFGSLAVGVSAQEKSDTATIRALESKWVDAYKQRQIATVASLLADDYVITLEDGTTYGKVGFISYNAGSLRVD
Ga0066709_1045006971	3300009137	Grasslands Soil	MRARILSALVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQI
Ga0099792_104558562	3300009143	Vadose Zone Soil	LSTSVLCLLGCVAVRDLAQEKSDVATIRALELKWVDAYKQRQIAAVGALLAEDYVITLEDGSTYGKVGFVSYSAGPLRVDVAELADVKIRM
Ga0099792_109946031	3300009143	Vadose Zone Soil	MRAPTFLILILFLLFGCFTSSGPGQEKADTAEIRAMESKWVDAYKQRQITALASLLAEDYVITVEDG
Ga0134065_102330091	3300010326	Grasslands Soil	MRAQILSTLLLCLLGCFAVRNLAQEKSDVASIRTLELKWVDSYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFISYNAGPWRVDIAD
Ga0126372_132188152	3300010360	Tropical Forest Soil	MRARIFSALALCLLALFSVRALAQDKSDAAAIRTLEQKWVDAYRQRQITTVASLL
Ga0137392_115507541	3300011269	Vadose Zone Soil	MRPWIFSILVLGLLGCIGIRALAQEKAEVASIRALESKWMDAYKHRQIAALS
Ga0137393_100387604	3300011271	Vadose Zone Soil	MRARIFSTLVLCLLGCFAVRNAAQEKSDVAGIRTLEFKWVDAYKQRKIADVATLLAEDYVITLE
Ga0137364_105526492	3300012198	Vadose Zone Soil	MRAQILWTLALCLLGCFAVPNLAQEKSDVASIRTLELKRVYAYK
Ga0137363_108301591	3300012202	Vadose Zone Soil	MRALIFSTLVLCLLASSAVRDLAQEKPDVASIRALELKWVDAYKQRQIAAVATLLAEDYVITLEDGSTYGK
Ga0137399_115140112	3300012203	Vadose Zone Soil	MRARILSTLVVCLLGCFAVRDLAQEKSDVASIRTLESKWVDAYKQRKIADVAALLAEDYVITLEDGSTYGKVGFISYNA
Ga0137380_103389841	3300012206	Vadose Zone Soil	MRARTFSALALCLFGSFAIHLSAQEKADAATIRALESKWVDAYKQRQFATVASLLAEDYVITVEDGGTYGKVGFISYNAGSLRVDVAE
Ga0137376_105765281	3300012208	Vadose Zone Soil	MRAQILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVASLLAEDYVITLEDGSTYGKVGFISYNAGPLRVDIADLT
Ga0137376_107946262	3300012208	Vadose Zone Soil	LSTSVLCLLGCVAARELAQEKSDVATIRALELKWVDAYKQRQIAAVGALLAEDYVITLEDGSTYGKVGFVSYSAGPLRVDVAELADVKIR
Ga0137370_106864472	3300012285	Vadose Zone Soil	MRAQILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYK
Ga0137370_110369281	3300012285	Vadose Zone Soil	MRAQILSTLLLCLLGCFAVRNLAQEKSDVASIRTLELKWVDSYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFISYNAGPLRVDI
Ga0137387_103393882	3300012349	Vadose Zone Soil	MRARILSILILCLLGSFAVPNLAQEKSDVQSIRTLELKWVDAYKQRQSVAMAALLAEDYVITLEDGSTYGKVGFIS
Ga0137387_112591661	3300012349	Vadose Zone Soil	MRAQILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRKI
Ga0137360_103950203	3300012361	Vadose Zone Soil	MRALIFSTLVLCLLASSAVRNLAQEKPEVASVRALELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTYGKIGFISYNAG
Ga0137358_100965413	3300012582	Vadose Zone Soil	MRARILSTLVVCLLGCFAVRDLAQEKSDVASIRTLESKWVDAYKQRKIADVAALLAEDYVITLEDGST
Ga0137398_103601412	3300012683	Vadose Zone Soil	MRARILSTLVFCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYV
Ga0137398_109641261	3300012683	Vadose Zone Soil	MRAPTFLILILFLLFGCFTSSGPGQEKADTAEIRAMESKWVDAYKQRQITALASLLAEDYVI
Ga0137395_103235802	3300012917	Vadose Zone Soil	MRTRIFTTLVLCLLGCFAVRDLAQEKPDVANIRTLELKWVDAYKQRKIADVAAL
Ga0137413_105428881	3300012924	Vadose Zone Soil	MRARILSILILCLLGSFAVPNLAQEKSDVQSIRTLELKWVDA
Ga0137413_115408392	3300012924	Vadose Zone Soil	MRTRIFSILILCLLGCFAARNAAQEKPDVAGIRALESKWVEA
Ga0137419_113472841	3300012925	Vadose Zone Soil	MRARILSILVPSLLGSFAVPNLAQEKSDVQSIRTMELKWVDAYKQRQSVALAALLAEDYVITLEDGSTYGK
Ga0137416_109859461	3300012927	Vadose Zone Soil	MRARILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFISYNAGPLR
Ga0137407_103337112	3300012930	Vadose Zone Soil	MRARILSILILCLLGSFAVPNPAQEKPDAQSIRTLELKWVDAYKQRQSVAMAALLADDYVITLEDGSTYGKVGFISYTAR
Ga0134110_104630051	3300012975	Grasslands Soil	MRVRIFSALSLCLLGSLAIRVCAQEKPDAATIRALESKWVDAYKQRQIATVASLLADDYVITLEDGSTY
Ga0134087_101733731	3300012977	Grasslands Soil	MRARILSTLVLCLLVCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLE
Ga0134081_101193172	3300014150	Grasslands Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKW
Ga0134079_103361122	3300014166	Grasslands Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGL
Ga0134079_104098601	3300014166	Grasslands Soil	MRARILSILILSLLGSFAVPNLAQEKSDVQSIHTLELKWVDAYKQRQSVALAALLADDCVIPLEDGSTYGKVGFISYTARPLRV
Ga0137412_101075046	3300015242	Vadose Zone Soil	MRTRIFSILILCLLGCFAARNAAQEKPDVAGIRALESKWVEAYKQRKIGDVATLLAEDYVITLEDGTTYGKVGFLSYNAGALRVDIAEL
Ga0137409_104824612	3300015245	Vadose Zone Soil	MRALIFSTLVLCLLASSAVRALAQEKPDVASIRALELKWVDAYKQRQIAAVATLLAEDYVITLEDG
Ga0066655_100000541	3300018431	Grasslands Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVIT
Ga0066669_107417922	3300018482	Grasslands Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITVEDGTT
Ga0066669_123754612	3300018482	Grasslands Soil	MRAQILWTLALCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAA
Ga0210406_102013491	3300021168	Soil	MRNRIFLTLILCVLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRKIADVAAVLADDYVITLEDGSTYGKVGFISYNAGPLRVDIAD
Ga0210400_100713661	3300021170	Soil	MRARIFSTLVFCLLACFPIGAMAQEKSDAETVRALESKWVDAYKHRQIASLSSLL
Ga0210389_114474411	3300021404	Soil	MRARIFSTLVFCLLACFPIGAMAQEKSDAETVRALESKWVDAYKHRQIASLSSLLAEDFVITVEDGSTYGKVGFISFNAGALQVE
Ga0210402_108013532	3300021478	Soil	MFSTLALCLLGFFAVHNLAQEKSDATNIRTLELKWVDAYKQRQIAAVAALLADDYVITVEDGSTYGKVGFISYNAGPLRVD
Ga0210402_110554832	3300021478	Soil	MRTLKFSTLVLCLLGCFAVRDLAQEKPDVASIRTLESKWVDAYKQRQIA
Ga0210409_108129611	3300021559	Soil	MRTRILSTLVLCLLGCFAVCDLAQEKPDVAGIRTLELKWVDAYKQRKIADVAAL
Ga0126371_109435241	3300021560	Tropical Forest Soil	MRARIFSAFALCVLSSFAVRTLAQEKSDAAAVRALEQKWVDAYKQRQITSVASL
Ga0126371_130733142	3300021560	Tropical Forest Soil	MRARIFLALALCLLGCFAVRNFAQEKPDAAAIRALESKWVDAYKQRQITTVASLLAEDYVITLEDGS
Ga0126371_132505082	3300021560	Tropical Forest Soil	MRARIFSALALCLHGCFAVRNLAQEKPDAAAIRALESKWVDAYKQRQITTVASLLADDYVITLEDG
Ga0126371_132536733	3300021560	Tropical Forest Soil	MRARIFSALALCLLGCFAVRNLAQERPDAAAIRALESKWVDAYKQRQITTVASLLADDYVITLEDG
Ga0247679_10657501	3300024251	Soil	MRARIFSILVLCLFGCFSVRNLAEEKSDVESIRTLESKWVDAYKQRQSVAMAALLAEDYVITLEDGSTYGKVGFISYTARPLRVDLAELSD
Ga0247668_11131081	3300024331	Soil	MRARIFTILVLCLLGCFAVRNLAQEKSDVDTTIRTLESKWVDAYKQRQSIAMAALLADDYVITLEDGSTYGKVGFISYTARPLRVDLAELTDVKI
Ga0207663_106915451	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRARIFSILVLCFFGCFAIRDWAQEKSDVANIRALESKWADAYKQRQIGTLSSLLSEDYVITVEDGSTYGKVGFISRSSGPLR
Ga0207700_119467062	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRARIFTILVLCLLGCFAVRNSAQEKSDVDTTIRTLESKWVDAYKQRQSIAMAALLAE
Ga0209688_10959901	3300026305	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITV
Ga0209265_10006711	3300026308	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVAGLLADDYVITVEDGTTYGKVGFISYN
Ga0209239_12160911	3300026310	Grasslands Soil	MRARILSALVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLA
Ga0209155_10066606	3300026316	Soil	MRAQILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFISYNAGPLRVDIADLTDV
Ga0209131_12146912	3300026320	Grasslands Soil	MRARILSILILSLLGSFAVPNLAQEKSDVEGIRTQEL
Ga0209802_13236331	3300026328	Soil	MRTRIFSTLVLCLLGCFAVRNAAQEKSDVASIRTLEFKWVDAYKQRKIADVAPLLAEDYVITLEDGSTYGKVGFLSYNAGALRVDIADLTDVKIHM
Ga0209804_13410312	3300026335	Soil	MRARIFSALSLCLLGSLAMRVSAQEKSDAATIRALESKWVDAYKQRQIATVASLLADDYVITLEDG
Ga0257150_10047481	3300026356	Soil	MRALVFSTLVLCLLASAAVRDLAQEKPDVASIRALELK
Ga0209648_100788843	3300026551	Grasslands Soil	MRTRIFSILVLCLLGCFAVRNAAQEKSDVAGIRTLEFKWVDAYKQRKIADVATLLAEDYVITLEDGSTYGKV
Ga0209648_104158101	3300026551	Grasslands Soil	MRARIFSTLVLCLLGCFAVRNAAQEKSDVASIRTL
Ga0209648_104865852	3300026551	Grasslands Soil	MRARISSTLVFCLLGCFAVRNAAQEKSDVASIRTLEFKWVDAYKQRKIADVATLLAEDYVITLEDGSTYGKV
Ga0209648_108198842	3300026551	Grasslands Soil	MRALIFSTLVLCLLASSAVRDLAQEKPDAASIRALELKWVDAYKRRQIDAVAALLAEDYVIT
Ga0209577_104223762	3300026552	Soil	MRAGIFSTLALCLLGCFAVRDLAQEKSDATSIRALESKWVDAYKQRQIATVA
Ga0179587_106169261	3300026557	Vadose Zone Soil	MRTRIFSILMLCLLGCFAVRNAAQEKPDVAGIRALESKWVEAYKQRKIGDVATLLAEDYVITLEDGSTYGKVGFLSYNAGALRVDIADLTDVKIHM
Ga0209332_10977302	3300027439	Forest Soil	MYAVGCILDLVLSLRGCFAILAVAQEKSDAASIRGLASKRRDAQKHRQIAAPSSLRAEDFVITVEDGSTYGKVGFISYNCAWT
Ga0209178_11195232	3300027725	Agricultural Soil	MRVRIFSGLSLCLLASLAIRVSAQEKSDAAAVRALESKWVDAYKQRQIATVASLLSDDYVITLEDGSTYGKVGFISYNAGSLRVDVAEASDL
Ga0209074_103830172	3300027787	Agricultural Soil	MRARIFSALTLCLLASFAFRVSAQEKSDAGTIRALESKWVDAYKQRQIATVAS
Ga0209074_105008392	3300027787	Agricultural Soil	MRVRIFSGLSLCLLASLAIRVSAQEKSDAAAVRALESKWVDAYKQRQ
Ga0209180_100746484	3300027846	Vadose Zone Soil	MRTRIFSILVLCLLGCFAVRNAAQEKSDVAGIRTLEFKWVDAYKQRKIADVATLLAEDYVITLE
Ga0209701_102388922	3300027862	Vadose Zone Soil	MRALIFSTLVLCLLASSAVRDLAQEKPDVASIRALELKWVDAYKRRQIDAVAALLAED
Ga0247682_10175951	3300028146	Soil	MRARIFTTFVLCLLGGFAVRNSAQEKSDVDTTIRTLESKWVDAYKQRQSIAMAALLAEDYVITLEDGSTYGKVGFISYTARPLRVDL
Ga0137415_101000547	3300028536	Vadose Zone Soil	MRTLIFSTFVLCLLGCFAVRDLAQEKSDVASIRALELKWVDAYKQRQIAAVATLLAEDYVITLEDGSTYGKVGFISYNAGPLRVDIADLADI
Ga0137415_105793702	3300028536	Vadose Zone Soil	MRARILSTLVLCLLGCFAVRNLAQEKSDVASIRTLELKWVDAYKQRQIAAVAALLAEDYVITLEDGSTYGKVGFISYNAGP
Ga0170824_1273863041	3300031231	Forest Soil	MRTRICSTLALCLLGCFAVHNVAQEKSEAANIRTLELKWVDAYKQRQIAAVAALLADDYVITLEDGSTYGKVGFISYNT
Ga0307475_102677102	3300031754	Hardwood Forest Soil	MRVVRVSPFLVCLFGCFAVGDLAQEKPDAAAIRVLESKWVDAYKQRQIATVASLLAEDYVITVEDGSTY
Ga0307478_115044671	3300031823	Hardwood Forest Soil	MRALLFSTLILCLLASSAVRDLAQEQPEAASIRALELKWVDAYKQRQIANVAAL
Ga0307479_110476483	3300031962	Hardwood Forest Soil	MRTWIFLILGFALLGCLAVSDLAQEKAEVAAIRILESKWVDAYKQRRIAAVAALLAEDY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences