Metagenome / Metatranscriptome Family F100889

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100889
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	54 residues
Representative Sequence	TKYSTIILDGGPVDPADSIVIGVNQAQRVNSDAWWRADLQPAAEAAVPRKKP
Number of Associated Samples	97
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	92.16 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (86.275 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.823 % of family members)
Environment Ontology (ENVO)	Unclassified (37.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 10.00% Coil/Unstructured: 70.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13709	DUF4159	9.80
PF02687	FtsX	3.92
PF11219	DUF3014	2.94
PF08241	Methyltransf_11	2.94
PF01436	NHL	1.96
PF13532	2OG-FeII_Oxy_2	1.96
PF13620	CarboxypepD_reg	1.96
PF04519	Bactofilin	1.96
PF01381	HTH_3	0.98
PF13185	GAF_2	0.98
PF07676	PD40	0.98
PF14534	DUF4440	0.98
PF01799	Fer2_2	0.98
PF01610	DDE_Tnp_ISL3	0.98
PF12704	MacB_PCD	0.98
PF00753	Lactamase_B	0.98
PF02738	MoCoBD_1	0.98
PF07366	SnoaL	0.98
PF14333	DUF4389	0.98
PF00596	Aldolase_II	0.98
PF01927	Mut7-C	0.98
PF00892	EamA	0.98
PF03781	FGE-sulfatase	0.98
PF00155	Aminotran_1_2	0.98
PF02775	TPP_enzyme_C	0.98
PF03795	YCII	0.98
PF01557	FAA_hydrolase	0.98
PF00072	Response_reg	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.96
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.98
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.16 %
Unclassified	root	N/A	13.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.47 %
Unclassified	root	N/A	13.73 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Unclassified	root	N/A	13.73 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.94 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.98 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.98 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Unclassified	root	N/A	13.73 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.94 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.98 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Unclassified	root	N/A	13.73 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.94 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.55 %
Unclassified	root	N/A	13.73 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.94 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.98 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.98 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GKA24FP02GHAKY	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300003321\|soilH1_10027303	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300004081\|Ga0063454_100527400	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300004114\|Ga0062593_102699483	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300004463\|Ga0063356_104225901	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300004463\|Ga0063356_106335883	Not Available	507	Open in IMG/M
3300004479\|Ga0062595_102077356	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005328\|Ga0070676_11307903	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005334\|Ga0068869_101774734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300005338\|Ga0068868_100568393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300005338\|Ga0068868_101889611	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005347\|Ga0070668_101626130	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005355\|Ga0070671_101077070	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005438\|Ga0070701_10304836	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300005458\|Ga0070681_10849498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	831	Open in IMG/M
3300005468\|Ga0070707_101879526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005471\|Ga0070698_101632362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005532\|Ga0070739_10512782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300005549\|Ga0070704_101623049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005553\|Ga0066695_10016036	All Organisms → cellular organisms → Bacteria → Acidobacteria	4084	Open in IMG/M
3300005564\|Ga0070664_101611731	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300005578\|Ga0068854_100019763	All Organisms → cellular organisms → Bacteria	4546	Open in IMG/M
3300005598\|Ga0066706_11084892	Not Available	613	Open in IMG/M
3300005713\|Ga0066905_100487864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1021	Open in IMG/M
3300005719\|Ga0068861_102244490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300005719\|Ga0068861_102352492	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005844\|Ga0068862_101639006	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006046\|Ga0066652_101078605	Not Available	761	Open in IMG/M
3300006755\|Ga0079222_12235954	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300006796\|Ga0066665_10371612	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300006852\|Ga0075433_11125141	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006871\|Ga0075434_100396998	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300006904\|Ga0075424_100595095	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300006918\|Ga0079216_10492072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	806	Open in IMG/M
3300009053\|Ga0105095_10554658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300009093\|Ga0105240_10549272	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300009100\|Ga0075418_10032566	All Organisms → cellular organisms → Bacteria	5666	Open in IMG/M
3300009100\|Ga0075418_12761424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009147\|Ga0114129_12659100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300009148\|Ga0105243_11020432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300009553\|Ga0105249_13493887	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009610\|Ga0105340_1480974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010043\|Ga0126380_10917428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	729	Open in IMG/M
3300010399\|Ga0134127_13023743	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010403\|Ga0134123_11126515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300011271\|Ga0137393_10667104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	891	Open in IMG/M
3300012189\|Ga0137388_10623565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300012349\|Ga0137387_10874171	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012360\|Ga0137375_10556959	Not Available	963	Open in IMG/M
3300012469\|Ga0150984_123660707	Not Available	699	Open in IMG/M
3300012958\|Ga0164299_11192552	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012985\|Ga0164308_10438665	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300012987\|Ga0164307_11084864	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300013297\|Ga0157378_12798622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300013307\|Ga0157372_12881547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	551	Open in IMG/M
3300013308\|Ga0157375_13495052	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300014326\|Ga0157380_12337833	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300014883\|Ga0180086_1026148	Not Available	1329	Open in IMG/M
3300015371\|Ga0132258_10429622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3289	Open in IMG/M
3300016294\|Ga0182041_12250469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300017959\|Ga0187779_10956957	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300018031\|Ga0184634_10349235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	678	Open in IMG/M
3300018075\|Ga0184632_10487487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	507	Open in IMG/M
3300018082\|Ga0184639_10535433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300018083\|Ga0184628_10291469	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300018422\|Ga0190265_12257453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300021080\|Ga0210382_10505696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300022309\|Ga0224510_10546289	Not Available	686	Open in IMG/M
3300022694\|Ga0222623_10382648	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300025155\|Ga0209320_10176204	Not Available	940	Open in IMG/M
3300025311\|Ga0209343_10400340	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300025326\|Ga0209342_11204247	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025327\|Ga0209751_10050389	All Organisms → cellular organisms → Bacteria	3631	Open in IMG/M
3300025327\|Ga0209751_11020045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300025908\|Ga0207643_10266265	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300025909\|Ga0207705_10294541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1243	Open in IMG/M
3300025913\|Ga0207695_11180660	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300025929\|Ga0207664_10014937	All Organisms → cellular organisms → Bacteria → Proteobacteria	5622	Open in IMG/M
3300025935\|Ga0207709_11273420	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300025940\|Ga0207691_10702114	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300025949\|Ga0207667_10238363	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300026023\|Ga0207677_11125481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300026320\|Ga0209131_1276838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300027773\|Ga0209810_1388792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300027907\|Ga0207428_11142434	Not Available	543	Open in IMG/M
3300027908\|Ga0209006_10755584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300028145\|Ga0247663_1100843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300028802\|Ga0307503_10678485	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300028803\|Ga0307281_10300102	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031114\|Ga0308187_10406033	Not Available	539	Open in IMG/M
3300031198\|Ga0307500_10090610	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031640\|Ga0318555_10332667	Not Available	822	Open in IMG/M
3300031893\|Ga0318536_10047129	Not Available	2071	Open in IMG/M
3300031940\|Ga0310901_10585161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300031943\|Ga0310885_10682821	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300032261\|Ga0306920_103002883	Not Available	637	Open in IMG/M
3300033412\|Ga0310810_11310437	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300034150\|Ga0364933_071143	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300034164\|Ga0364940_0126063	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300034194\|Ga0370499_0222991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300034690\|Ga0364923_0056905	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.71%
Host-Associated	Host-Associated	35.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.92%
Plants	Host-Associated → Plants	35.29%
Aquatic	Environmental → Aquatic	10.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.75%
Sediment	Environmental → Aquatic → Sediment	6.86%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Floodplain	Environmental → Terrestrial → Floodplain	2.94%
Marine	Environmental → Aquatic → Marine	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.69%
Loam	Environmental → Terrestrial → Soil → Loam	12.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.90%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_01692970	2124908006	Soil	MVLDGSSVEQGDSIVIGVNQAQRVSSDAWWRADLQAAAETRVPKKP
soilH1_100273031	3300003321	Sugarcane Root And Bulk Soil	AHETKYSTLVLDGSPLEAGDTLVIGVNQAQRVGSDAWWRADLQPAAQALVEKKKE*
Ga0063454_1005274001	3300004081	Soil	ARQVAPGRRALDARETKYSAMVLDGSPVEPGDVIVAGINQAQRVNSDAWWRADLQAAAEARVPRKP*
Ga0062593_1026994831	3300004114	Soil	TTKFSTIVLDGSTIAPTDQIVIGVNQAQRVNSEAWWRGDIQAAAEAAVKHTK*
Ga0063356_1042259012	3300004463	Arabidopsis Thaliana Rhizosphere	LVVDGSPVEATDVIVIGINQAQHAGSTAWWRADLQRAAEAAVPLKKP*
Ga0063356_1063358832	3300004463	Arabidopsis Thaliana Rhizosphere	DGTAIDPTDVIVIGINQVQQTGSDAWWRADLQPAAEAAVPLKK*
Ga0062595_1020773562	3300004479	Soil	TLKARQTAPGRRMLDPRGTKYSTLVLDGSEVDATDIVVVGVNQVQRVNSDAWWRADVQAAAEGLVPHKKP*
Ga0070676_113079032	3300005328	Miscanthus Rhizosphere	MVLDGSPVEPGDVIVAGINQAQRANSEAWWRADLQAAAEAKVPRKP*
Ga0068869_1017747342	3300005334	Miscanthus Rhizosphere	TLDARSTKYSTLVLDGAPIDATDVVVVGVNQAQRADSEVWWRADLQTMAEAKQPKKP*
Ga0068868_1005683932	3300005338	Miscanthus Rhizosphere	TKYSTLVLDGAPIDATDVVVVGVNQAQRADSEVWWRADLQTMAEAKQPKKP*
Ga0068868_1018896111	3300005338	Miscanthus Rhizosphere	RRMLDPRGTKYSTLVLDGSEVDATDIVVVGVNQVQRVNSDTWWRADVQAAAEGLVPHKKP
Ga0070668_1016261301	3300005347	Switchgrass Rhizosphere	VLDGSTIAPTDQIVIGVNQAQRVNSEAWWRGDIQAAAEAAVKHTK*
Ga0070671_1010770702	3300005355	Switchgrass Rhizosphere	DPRETKYSTLVLDGSAVEPTDVIVVGINQAQRVGSDAWWRADLQPAAEAAVPLHKR*
Ga0070701_103048362	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	HLLEAKTTKFSTIVLDGSTIAPTDQIVIGVNQAQRVNSEAWWRGDIQAAAEAAVKHTK*
Ga0070681_108494982	3300005458	Corn Rhizosphere	ETKYSTLVLDGSAIDATDVIVIGINQAQRGTSDPWWRADLQPAAEAAVPLRKR*
Ga0070707_1018795261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TLEPHETKYSTLVLDGSAIDPTDVIVIGINQAQQVGSDAWWRADLQPAAEAAVPLKKR*
Ga0070698_1016323622	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DGGPVDPTDSIVIGVNQAQRRVSDPWWRADLQPAAEAAVPAKKP*
Ga0070699_1017700401	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HGTKYSTMVPDGFPIELTDTIVIGVNQAQRVGSEEWWQADLQAAAEDAAKRRKP*
Ga0070739_105127821	3300005532	Surface Soil	LQNAETKYSTLVLDGSAIEPTDQIVVGVNAAQRVGSDAWWRGNPQALAEAAVNKKP*
Ga0070704_1016230491	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LDGGKVDPSGFIVIGVNQAQRVNPDTWWRADLRAAAEAAVPRQKQ*
Ga0066695_100160363	3300005553	Soil	LDARSTKYSTLVLDGSPIDATDVIVVGVNQAQRVDSEAWWRADLQTMAEAAQRTKP*
Ga0070664_1016117311	3300005564	Corn Rhizosphere	VLDGSTIEPTDIIVIGINQAQRVGSETWWRTDLQPAAEAAVPLKKR*
Ga0068854_1000197636	3300005578	Corn Rhizosphere	TLVLDGSAIDATDVIVIGINQAQRVGSDAWWRADLQRAAEAAVPQRKP*
Ga0066706_110848921	3300005598	Soil	TKYSTLVLDGSPIEPNFVIVIGANQAQRAGSEVWWRADLQPAAEAAVPLKKR*
Ga0066905_1004878643	3300005713	Tropical Forest Soil	TLVLDGTAVEPSDIVVIGVNQAQHVGSSEWWRAELRAAAEAAVPLKKQN*
Ga0068861_1022444902	3300005719	Switchgrass Rhizosphere	KATQLAPGRRTLDARGTKYSTMVLDGSPIEPTDVIVVGVDQAQRAATEVWWRTDLRPAATAAAAAAQGKKP*
Ga0068861_1023524922	3300005719	Switchgrass Rhizosphere	DPRETKYSAMVLDGSPVEPGDVIVAGINQAQRANSEAWWRADLQAAAEAKVPRKP*
Ga0068862_1016390062	3300005844	Switchgrass Rhizosphere	TKYSTIVLDGGPVDPTDSVVVGVNQAQRRTTDPWWRADLQPAAEKAVPVKKP*
Ga0066652_1010786052	3300006046	Soil	LVLDGAPLDRADIVVVGINQVQRAGSEAWWRAELQRAAEAAVPLKKK*
Ga0079222_122359541	3300006755	Agricultural Soil	YSSMVLDGSEIGPTDVIVAGVNQAQRAGSESWWRADVQRAAEAAVPRKKF*
Ga0066665_103716121	3300006796	Soil	VAPGRRTLDARGTKYSAMVLDGFPIEPTDTVIVGVNQAQRVGSDAWWRAELQEAAQAAAAAKRPKEERRR*
Ga0075433_111251411	3300006852	Populus Rhizosphere	KYSTLVVDGGPVDPTDVIVIGINQAQHAGSDAWWRTDLQRAAEAAVPLKKP*
Ga0075434_1003969981	3300006871	Populus Rhizosphere	PARRTLDARSTKYSTVVLDGEPITAASTIVVGANQSQRVNSQTWWRADLQPAAEAAVKQKKP*
Ga0075424_1005950951	3300006904	Populus Rhizosphere	YSTLVLDGSAVEPTDVIVVGINQAQRVGSDAWWRADLQPAAEAAVPLHKR*
Ga0079216_104920721	3300006918	Agricultural Soil	IVLDGGPVDPAGSIVIGVNQVQRVNSDTWWKADLRAAAEAAVPRVKP*
Ga0105095_105546581	3300009053	Freshwater Sediment	TKYSTIVLDGGPVDPADSIVIGINQVQRVNSDTWWRADLKAAAETAVPRKKP*
Ga0105240_105492721	3300009093	Corn Rhizosphere	VAPGRRSLDAHGAKYSSMVLDGSEIGPTDVIVAGVNQAQRAGSESWWRADVQRAAEAAVPRKKF*
Ga0075418_100325665	3300009100	Populus Rhizosphere	DGSPIGATDQIVIGVNQAQRANSETWWRTELQSTAEAAVKRKNP*
Ga0075418_127614241	3300009100	Populus Rhizosphere	AKTTKYSTIVLDGGKVDPAGFIVIGVNQAQRLSPDTWWRADLRATAEAAVPRKKP*
Ga0114129_126591001	3300009147	Populus Rhizosphere	GSPIDPTDLIVVGVNQAQKVNSEAWWRADLQPLAQAAVKQK*
Ga0105243_110204321	3300009148	Miscanthus Rhizosphere	DGSPIEAGDSIVIGVNQAQRVKSDVWWRADLQAAAEAVVRAKKR*
Ga0105249_134938872	3300009553	Switchgrass Rhizosphere	RETKYSAMVLDGSPAEAGDSIVVGVNQAQRVNSESWWRADLQAAAEARVPKKP*
Ga0105340_14809742	3300009610	Soil	YSTMVLDGSPVAPTDLVVVGVNQAQRVNSDVWWRAELQAAAEAAVKNSKP*
Ga0126380_109174281	3300010043	Tropical Forest Soil	AHETKYSTLVLDGSDVEASDVIVIGINQVQHAGSDAWWRADLQRAAEALVPLKKP*
Ga0134127_130237431	3300010399	Terrestrial Soil	ARQVAPGRRTLEAHETKYSAMVLDGSPIEPGDSIVVGVNQVQRVNSDAWWRADLQAAAEARVPKKP*
Ga0134123_111265153	3300010403	Terrestrial Soil	EAHEVKYSTLVLDGSKVDRTDIVVLGINQVQRAGSASWWRAELRRAAEAAVPLKKK*
Ga0137393_106671042	3300011271	Vadose Zone Soil	ARSTKYSTLVLDGSPVDPTDVIVVGVNQAQRVGSEVWWRAELQTAAEAATRGKKP*
Ga0137388_106235653	3300012189	Vadose Zone Soil	VLDGSNVEPSDVIVIGINQTQHVGSNEWWRADLQPAAEATVPLKKP*
Ga0137387_108741712	3300012349	Vadose Zone Soil	VAPGRRTLDAHGTKYSTLVLDGSPIEPTYAVVIGVNQAQRAGSEVWWHTDLQPAAEAAVPLKKR*
Ga0137375_105569593	3300012360	Vadose Zone Soil	PHETKYSTLVLEGSEIDSTDVIVIGVHQAQQVGSDAWWRADLQRAAEAAVPLKKR*
Ga0150984_1236607072	3300012469	Avena Fatua Rhizosphere	TLDPKETKYSTLVLDGSPVEPTDVIVVGINQVQRVGSEAWWRADLQPAAEAAVPLKK*
Ga0164299_111925522	3300012958	Soil	APGRRMLDPSGSKYSTLVLDGAEVDAADIVVVGVNQVQRVNSDAWWRADVQAAAEGLVPRKKP*
Ga0164308_104386652	3300012985	Soil	VAPGRRSLDARETKYSAMVLDGSPIETGDVVVAGINQAQRVNSDAWWRADLQAAAEARVPRKP*
Ga0164307_110848642	3300012987	Soil	AMVLDGSPVEPGDVIVAGINQAQRANSEAWWRADLQAAAEAKVPRKP*
Ga0157378_127986221	3300013297	Miscanthus Rhizosphere	RRTLDARGSKYSALVLDGSPIDPTDAIVVGVNQAQRVNSETWWRADLQVAAETAVPRKKK
Ga0157372_128815471	3300013307	Corn Rhizosphere	TKYSTLVLDGSAIDATDVIVIGINQAQRGTSDPWWRADLQPAAEAAVPLRKR*
Ga0157375_134950522	3300013308	Miscanthus Rhizosphere	PGRRSLDPRETKYSAMVLDGSPVEPGDVIVAGINQAQRANSEAWWRADLQAAAEAKVPRKP*
Ga0157380_123378332	3300014326	Switchgrass Rhizosphere	LLEAKTTKFSTIVLDGSTIAPTDQIVIGVNQAQRVNSEAWWRGDIQAAAEAAVKHTK*
Ga0180086_10261481	3300014883	Soil	RTLDPRGTKHSTIVLDGSPIEPTDLIVVGVNQAQRVNSDVWWRAELQTAAEAAAQPRKP*
Ga0132258_104296225	3300015371	Arabidopsis Rhizosphere	RTLEAHEVKYSTLVLDGSKVDRTDIVVVGINQVQRAGSDAWWRAELQRAAEAAVPLKKK*
Ga0182041_122504691	3300016294	Soil	VLDGSPIDPTDAIVIGVNQAQRVNSEVWWRADLQPAAEAAVPLKKR
Ga0187779_109569572	3300017959	Tropical Peatland	KYSTLVLDGSAIDATDQVVVGVNQAQRVNSEAWWRSDIQPAAEAAVKKKK
Ga0184634_103492352	3300018031	Groundwater Sediment	RTLDPRGTKHSTIVLDGSPIEPTDLIVVGVNQAQRVNSEVWWRAELQGAAEAAAQPRKP
Ga0184632_104874871	3300018075	Groundwater Sediment	TKYSTLVLDGGPIDPTDVIVVGINQVQRAGSDDWWRTELQPAAEAAVPVRKD
Ga0184639_105354332	3300018082	Groundwater Sediment	EARSTKYSTIVLDGGPVDPADSSVIGVNQAQRRESDPWWRADLQPAAEAALPLKKP
Ga0184628_102914691	3300018083	Groundwater Sediment	TLKARQVAPGRRSLDARETKYSAMVLDGSPVEPGDVIVAGVNQAQRVNSEAWWRADLQAAAEAKVPRKP
Ga0190265_122574533	3300018422	Soil	TKYSTIVLDGGPVDPAGSIVIGVNQAQRVNSDTWWRADLRAAAEAAVPRVKQ
Ga0210382_105056962	3300021080	Groundwater Sediment	TLVLDGSPIDATDVIVVGVNQSQRVGSEVWWRADLQTLAEAAAQRKKP
Ga0224510_105462891	3300022309	Sediment	STKYSTIVLDGSPVDPAGFIVIGVNQAQRVNSEIWWRADLKAAAETAVPRTKP
Ga0222623_103826482	3300022694	Groundwater Sediment	VLDGGPVDPTDSIVIGVNQAQRKVSDPWWRADLQPAAEAAVPPKKP
Ga0209320_101762042	3300025155	Soil	MVIDGAPVAATDVIVIGVNQAQRLDSDAWWRADLQPAAEATQRKQP
Ga0209343_104003403	3300025311	Groundwater	ISAAPGRRTLNPRETKYSTMVIDGAPVAATDVIVIGVNQAQRLDSEAWWRADLQPAAEATQRKQP
Ga0209342_112042471	3300025326	Soil	MVIDGAPVAATDVIVSGVNQAQRLDSDAWWRADLQPAAEATQRKQP
Ga0209751_100503891	3300025327	Soil	MVIDGAPVAATDVIVIGVNQAQRLDSDAWWRADLQPA
Ga0209751_110200451	3300025327	Soil	PRENKYSTMVIDGAPVAATDVIVIGVNQAQRLDSDAWWRADLQPAAEATQRKQP
Ga0207643_102662651	3300025908	Miscanthus Rhizosphere	RQVAPGRRALDARETKYSAMVLDGSPVEAGDAIVIGVNQAQRVGSDAWWRADVQAAAEARVPKKP
Ga0207705_102945411	3300025909	Corn Rhizosphere	VLDGSAIDATDVIVIGINQAQRGTSDPWWRADLQPAAEAAVPLRKR
Ga0207695_111806602	3300025913	Corn Rhizosphere	VLDGSEIGPTDVIVAGVNQAQRAGSESWWRADVQRAAEAAVPRKKF
Ga0207664_100149378	3300025929	Agricultural Soil	LDAHGAKYSSMVLDGSEIGPTDVIVAGVNQAQRAGSESWWRADVQRAAEAAVPRKKF
Ga0207709_112734202	3300025935	Miscanthus Rhizosphere	GTLKARQVAPGRRTLDAHETKYSAMVLDGSPVEQGDSIVIGVNQAQRVSSDAWWRADLQAAAEARGPKKP
Ga0207691_107021142	3300025940	Miscanthus Rhizosphere	TLKARQVAPGRRSLDPHETKYSAMVLDGSPVEPGDVIVAGINQAQRANSEAWWRADLQAAAEAKVPRKP
Ga0207667_102383631	3300025949	Corn Rhizosphere	YSTLVLDGSAVEPTDVIVVGINQAQRVGSDAWWRADLQPAAEAAVPLHKR
Ga0207677_111254812	3300026023	Miscanthus Rhizosphere	TKYSTLVLDGAPIDATDVVVVGVNQAQRADSEVWWRADLQTMAEAKQPKKP
Ga0209131_12768381	3300026320	Grasslands Soil	EAHSTKFSAMVIDGSPIGPTDQIVIGVNQAQRVNSDAWWRGDIQPAAEAAARKKNR
Ga0209810_13887921	3300027773	Surface Soil	LQNAETKYSTLVLDGSAIEPTDQIVVGVNAAQRVGSDAWWRGNPQALAEAAVNKKP
Ga0207428_111424341	3300027907	Populus Rhizosphere	LEPNETKYSTLVVDGGQVDPTDVIVIGINQAQHTGSDAWWRTDLQRAAEAAVPLKKP
Ga0209006_107555843	3300027908	Forest Soil	MVLDGSPIDTTDVIVLGVNQAQRVGSEVWWRADLQPAAEAATQRKKP
Ga0247663_11008431	3300028145	Soil	LDGSPIDPTDAIVVGVNQAQRVNSETWWRADLQVAAETAVPRKKK
Ga0307503_106784852	3300028802	Soil	RRSLDARETKYSAMVLDGSPIEAGDVIVAGVNQAQRANSEAWWRADIQAAAEARVPRKP
Ga0307281_103001022	3300028803	Soil	GRRSLDARETKYSAMVLDGSPVEPGDVIVAGINQAQRVNSEAWWRADLQAAAEAKVPRKP
Ga0308187_104060332	3300031114	Soil	RRTLDPRETKYSTLVLDGSPIGPDFVIVIGANQAQRAGSEVWWHADLQPAAEAAVPLKKR
Ga0307500_100906101	3300031198	Soil	TKYSAMVLDGSSIEAGDVIVAGVNQAQRANSEAWWRADIQAAAEARVPRKP
Ga0318555_103326672	3300031640	Soil	GTKYSTLVLDGSPIEPTDQIVVGVNQAQRVNSDAWWRADIQAAAEGAARKKK
Ga0318536_100471294	3300031893	Soil	KYSTLVLDGSPIEPTDQIVVGVNQAQRVNSDAWWRADIQAAAEGAARKKK
Ga0310901_105851612	3300031940	Soil	VKYSTLVLDGSKVDRTDIVVLGINQVQRAGSDSWWRAELQRAAEAAVPLKKK
Ga0310885_106828212	3300031943	Soil	TTKFSTIVLDGSPIAPTDQIVIGVNQAQRVNSEAWWRGDIQAAAEAIVKKK
Ga0306920_1030028832	3300032261	Soil	APGRRTLDARGTKYSTLVLDGSPIEATDQIVVGVNQAQRVNSDAWWRADIQAAAEGAARKKK
Ga0310810_113104372	3300033412	Soil	LEPNETKYSTLVVDGGPVDPTDVIVIGINQAQHAGSDAWWRTDLQRAAEAAVPLKKP
Ga0364933_071143_665_868	3300034150	Sediment	KARQVAPGRRSLDARETKYSAMVLDGSPVEPGDVIVAGVNQAQRVNSEAWWRADIQAAAEARVPRKP
Ga0364940_0126063_2_160	3300034164	Sediment	TKYSTIILDGGPVDPADSIVIGVNQAQRVNSDAWWRADLQPAAEAAVPRKKP
Ga0370499_0222991_329_511	3300034194	Untreated Peat Soil	RRTLEARSTKYSTIVLDGGPVDPAGSIVIGVNQVQRVNSDTWWRADLQALAEAAVPRTKP
Ga0364923_0056905_768_911	3300034690	Sediment	MVLDGSPLEPTDVVVVGVDQAQRAGSEAWWRADLQPAAIAAAKPKKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences