Basic Information | |
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Family ID | F100720 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 53 residues |
Representative Sequence | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLCLDIFIWRP |
Number of Associated Samples | 66 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 43.56 % |
% of genes near scaffold ends (potentially truncated) | 26.47 % |
% of genes from short scaffolds (< 2000 bps) | 69.61 % |
Associated GOLD sequencing projects | 60 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (62.745 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (35.294 % of family members) |
Environment Ontology (ENVO) | Unclassified (78.431 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (76.471 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.01% β-sheet: 0.00% Coil/Unstructured: 46.99% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Lake Freshwater Lentic Freshwater Lake Sediment Freshwater Freshwater Lake Freshwater Lake Freshwater Sediment Freshwater Freshwater Aquatic Freshwater Aqueous |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25909J50240_10036277 | 3300003393 | Freshwater Lake | MKHPRTMNEAFPHTVEYGAAIEIHVAKHSTGDKVIRVLALVALIVLCLDIFIWRP* |
JGI25909J50240_10112534 | 3300003393 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP* |
JGI25909J50240_10135893 | 3300003393 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIWRP* |
JGI25917J50250_10759731 | 3300003395 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIWR |
JGI25911J50253_1000018215 | 3300003411 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP* |
Ga0049081_100920222 | 3300005581 | Freshwater Lentic | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLCLDIFIWRP* |
Ga0070749_100985043 | 3300006802 | Aqueous | MKHPRTMNEAFNNTLEYGAAIEIHVAQLSTAEKIIRVLALVALIVVALDVFIWRP* |
Ga0070749_107443551 | 3300006802 | Aqueous | MMKYKRTMNEAFPKTMEYGAAIEIHVAQHSIGDKVIRALALVALIVLALDCFIWRP* |
Ga0075464_1000165716 | 3300006805 | Aqueous | MKYPRYPRTMNEAFPKTMEYGAAIEIHVAQHSIGDKVIRALALVALIVLALDCFIWRP* |
Ga0075459_10336091 | 3300006863 | Aqueous | PHTVEYGAAIEIHVAQHSTAEKIIRVLALVALIVVALDVFIWRP* |
Ga0099847_10690204 | 3300007540 | Aqueous | MNEAFPKTVEYGAAIEIHVSQHSIGDRVIRALALVALIVLCLDIFIWRP* |
Ga0104986_176331 | 3300007734 | Freshwater | MNEAFPKTVQYGAAIEIHVAQTSIGERWIRAIALLGLIVVLLDVLVWRP* |
Ga0114880_10329073 | 3300008450 | Freshwater Lake | MMKHPRTLNEAFHKTVEYGAAIEIHVAKHSTGDKIIRVLALIGAIVVALDVFIWRP* |
Ga0114880_10496873 | 3300008450 | Freshwater Lake | MNEAFHKTVEYGAAIEIHVAKHSTGDKVIRVLALVALIVLALDIFIWRP* |
Ga0114973_102050453 | 3300009068 | Freshwater Lake | MNEAFPHTMEYGAAIEIHVAHHTLAEKVIRVLALVGLIVLALDILVWRP* |
Ga0114973_102534453 | 3300009068 | Freshwater Lake | MNEAFHNTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP* |
Ga0114962_105175422 | 3300009151 | Freshwater Lake | MTNQRMKKMKHPRTLNEAFPHTVEYGAAIEIHVAHISTTDKIIMALAVCALVVLALDLFVWRA* |
Ga0114962_105656942 | 3300009151 | Freshwater Lake | MKKMKHPRTMNEAFHNTVEYGAAIEIHVAQHSTGDKVIRALALVALIVLCLDVFIWRP* |
Ga0114978_100901366 | 3300009159 | Freshwater Lake | FPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP* |
Ga0114978_106400873 | 3300009159 | Freshwater Lake | MKMKYPRTMNEAFHNTVEYGAAIEIHVAQLSTAEKIIRVLALVALIVVALDVFIWRP* |
Ga0114970_101839182 | 3300009163 | Freshwater Lake | MNEAFHNTLEYGAAIEIHVAHHTLAEKVIRVLALVGFIVLALDILVWRP* |
Ga0114975_103316945 | 3300009164 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAHVSTTDKIIMALAVCALVVLALDLFVWRA* |
Ga0114979_104580071 | 3300009180 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAHVSTTDKIIMALAVFALVI |
Ga0114979_108379522 | 3300009180 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAQHSTADKIIRALALVALIVLALDVFIWRP* |
Ga0114969_100367201 | 3300009181 | Freshwater Lake | TQTINQPRTMMKHPRTMNEAFHNTVEYGAAIEIHVAHHTLAEKVIRVLALVGFIVLALDFLVWRP* |
Ga0114969_103167523 | 3300009181 | Freshwater Lake | MNEAFHNTVEYGAAIEIHAVRHSTGDKVIRVLALVALIVLALDCFVWRP* |
Ga0114969_104524821 | 3300009181 | Freshwater Lake | TMNEAFPHTMEYGAAIEIHVAHHTLAEKVIRVLALVGLIVLALDILVWRP* |
Ga0114974_107733761 | 3300009183 | Freshwater Lake | TMNEAFPHTVEYGAAIEIHVAHVSTTDKIIMALAVCALVVLALDLFIWRA* |
Ga0114967_101369664 | 3300010160 | Freshwater Lake | MNEAFPHTMEYGAAIEIHVAHHTLAEKVIRVLALVGFIVLALDILVWRP* |
Ga0133913_117682321 | 3300010885 | Freshwater Lake | MTNQKMTKMKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWR |
Ga0133913_135032322 | 3300010885 | Freshwater Lake | MNEAFHNTVEYGAAIEIHVAQHSTGDKVIRALALVALIVLCLDVFIWRP* |
Ga0151517_127314 | 3300011113 | Freshwater | MNEAFPHTMEYGAAIEIHVAHHTLAEKVIRVLALVGFIVLALDFLVWRP* |
Ga0151515_104624 | 3300011114 | Freshwater | MNEAFNKTLEYGAAIEIHVSQHSIGDKVIRALALAALIVLCLDIFIWRP* |
Ga0153799_10048749 | 3300012012 | Freshwater | MNEAFHKTIEYGCAIEIHAVRHSTGDKVIRVLALVALVVLCLDIFIWRP* |
Ga0157210_10113383 | 3300012665 | Freshwater | MNEAFHKTIEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP* |
Ga0119960_10531943 | 3300014811 | Aquatic | FPVTIKQRMKKMKHPRTMNEAFHKTIEYGCAIEIHAMRHSTGDKIIRALALVALVVLCLDIFIWRP* |
Ga0181338_10498692 | 3300015050 | Freshwater Lake | MNEAFPHTVEYGAAIEIHAVRHTTGDKVIRVLALVALIVLCLDIFIWRP* |
Ga0181339_10343233 | 3300017700 | Freshwater Lake | EAFHKTMEYGCAIEIHAVRHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0181350_11261491 | 3300017716 | Freshwater Lake | MKHPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALD |
Ga0181350_11317552 | 3300017716 | Freshwater Lake | MKHPRTMNEAFHKTVEYGAAIEIHVAKHSNGDKAIRVLALVALIVLALDIFIWRP |
Ga0181362_10362641 | 3300017723 | Freshwater Lake | QPRTMMKHPRTMNEAFHKTVEYGAAIEIHVAQHSIGDKVIRVLALIALVVLCLDIFIWRP |
Ga0181365_11348761 | 3300017736 | Freshwater Lake | NKMKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFVWRP |
Ga0181352_10090194 | 3300017747 | Freshwater Lake | MKHPKHPRTMNEAFHKTVEYGAAIEIHVAQHSIGEKVIRVLALVGFIVLALDILVWRP |
Ga0181344_10605773 | 3300017754 | Freshwater Lake | MNEAFPRTVEYGASIEIHVAQHSIGDKVIRALALVALIVLCLDIFIWRP |
Ga0181357_10435912 | 3300017777 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTADKIIRVLALVALIVLALDCFVWRA |
Ga0181357_11489074 | 3300017777 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVICLDIFIWRP |
Ga0181357_13253123 | 3300017777 | Freshwater Lake | TNQRMNKMKHPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALVVLCLDIFIWRP |
Ga0181349_12085622 | 3300017778 | Freshwater Lake | MKYPRTMNEAFHKTVEYGAAIEIHVAKHSTGDKVIRVLALVALVVLALDIFIWRP |
Ga0181348_10173653 | 3300017784 | Freshwater Lake | MKYPRTMNEAFHKTMEYGCAIEIHAVRHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0181348_12089232 | 3300017784 | Freshwater Lake | MNEAFHKTVEYGAAIEIHVAQHSIGDKVIRVLALIALVVLCLDIFIWRP |
Ga0181348_13040091 | 3300017784 | Freshwater Lake | FPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFVWRP |
Ga0181355_11605624 | 3300017785 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVICLDIFIWRP |
Ga0181355_12178781 | 3300017785 | Freshwater Lake | RTMMKHPRTMNEAFHKTVEYGCAIEIHAVRHSTGDKVIRVLALVALIVLCLDCFVWRP |
Ga0181361_1106643 | 3300019783 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAKHSTGDKVIRVLALVALIVLCLDIFIWRP |
Ga0181359_100047122 | 3300019784 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIWRP |
Ga0181359_10129077 | 3300019784 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFVWRP |
Ga0181359_10375165 | 3300019784 | Freshwater Lake | MKHPRTMNEAFQKTVEYGAAIEIHVAQHSTGDKIIRVLALIGAIVLALDVFVWRP |
Ga0181359_10892563 | 3300019784 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFVWRP |
Ga0213922_10053927 | 3300021956 | Freshwater | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRA |
Ga0181354_100320311 | 3300022190 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP |
Ga0181351_100546112 | 3300022407 | Freshwater Lake | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP |
Ga0181351_10407333 | 3300022407 | Freshwater Lake | MKHPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP |
Ga0181351_11049253 | 3300022407 | Freshwater Lake | MNEAFHKTMEYGCAIEIHAVRHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0181351_11502823 | 3300022407 | Freshwater Lake | MKHPRTLNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0181351_12606621 | 3300022407 | Freshwater Lake | MNEAFPHTVEYGAAIEIHAVRHTTGDKVIRVLALVALIVLCLDIFIWRP |
Ga0214919_100129588 | 3300023184 | Freshwater | MKHPRTMNEAFHNTLEYGAAIEIHVAHHTLAEKIIRVLALVGFIVLALDTLVWRP |
Ga0214919_102479662 | 3300023184 | Freshwater | MKHPRTMNEAFHNTVEYGAAIEIHVAQHSTGDKVIRALALVALIVLALDVFIWRP |
Ga0214919_104152153 | 3300023184 | Freshwater | MNEAFPHTMEYGAAIEIHVAHHTFAEKVIRVLALVGFIVLALDILVWRP |
Ga0208916_1000015629 | 3300025896 | Aqueous | MKYPRYPRTMNEAFPKTMEYGAAIEIHVAQHSIGDKVIRALALVALIVLALDCFIWRP |
Ga0208975_10098814 | 3300027659 | Freshwater Lentic | MKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLCLDIFIWRP |
Ga0209443_10258728 | 3300027707 | Freshwater Lake | LRMTKMKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIWRP |
(restricted) Ga0247836_12646343 | 3300027728 | Freshwater | MRNHDKFPRTMNEAFPNSMENGACIEIHVAQHSTGDKIIRVLALIGAIVLALDVFVWRP |
Ga0209085_12858383 | 3300027741 | Freshwater Lake | MNEAFPHTVEYGAAIEIHVAHISITDKIIMALAVCALVVLALDLFVWRA |
Ga0209084_10253256 | 3300027749 | Freshwater Lake | MKHPRTMNEAFPHTVEYGAAIEIHVAHISITDKIIMALAVCALVVLALDLFVWRA |
Ga0209084_12512522 | 3300027749 | Freshwater Lake | MKKMKHPRTMNEAFHNTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLCLDVFIWRP |
Ga0209596_10017473 | 3300027754 | Freshwater Lake | MKHPRTINEAFPHTVEYGAAIEIHVAQHSTGDKVIRFLALVALIVLALDIFIWRP |
Ga0209596_10852002 | 3300027754 | Freshwater Lake | MKHPRTMNEAFPHTVEYGASIEIHVAHISTTDKIIMALAVCALVVLALDLFVWRA |
Ga0209134_102529251 | 3300027764 | Freshwater Lake | MKYPRTMNEAFPRTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLALDLFI |
Ga0209500_100809986 | 3300027782 | Freshwater Lake | RMMKMKYPRTMNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALVALVVLCLDIFIWRP |
Ga0209353_103298513 | 3300027798 | Freshwater Lake | TLNEAFPKTVEYGAAIEIHVAQHSTAEKIIRVLALVALIVLCLDIFIWRP |
Ga0209253_106611452 | 3300027900 | Freshwater Lake Sediment | MKYPRTMNEAFHNTVEYGAAIEIHVAQLSTAEKIIRVLALVALIVIALDVFIWRP |
Ga0209048_109124071 | 3300027902 | Freshwater Lake Sediment | NQRMKMKYPRTMNEAFHNTVEYGASIEIHVAQLSTAEKIIRVLALVALIVVALDCFIWRP |
Ga0209401_10043973 | 3300027971 | Freshwater Lake | MKHPRTINEAFPHTVEYGAAIEIHVAQHSTADKIIRALALIALIVLALDVFIWRP |
(restricted) Ga0247834_11312932 | 3300027977 | Freshwater | MKHPRTMNEAFPKTVEYGAAIEIHVAQHSTGDKIIRVLALIGAIVLALDVFVWRP |
(restricted) Ga0247834_12027481 | 3300027977 | Freshwater | MNEAFPNSMENGACIEIHVAQHSTGDKIIRVLALIGAIVLALDVFVWRP |
Ga0304729_12116843 | 3300028392 | Freshwater Lake | TPTTNQRMKMKHPRTMNEAFPHTVEYGAAIEIHVAHISITDKIIMALAVCALVVLALDLFVWRA |
Ga0315909_100331909 | 3300031857 | Freshwater | MKYPRTMNEAFHKTVEYGAAIEIHVAKHSTGDKVIRVLALIALIVLCLDIFIWRP |
Ga0315909_110059111 | 3300031857 | Freshwater | MKYPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFV |
Ga0315294_1000481920 | 3300031952 | Sediment | MKYPRTMNEAFPRTVEYGAAIEIHVAQHSTADKIIRALALVALIVLALDIFIWRP |
Ga0315905_100314195 | 3300032092 | Freshwater | MKHPRTLNEAFHKTVEYGAAIEIHVAKHSTGDKIIRVLALIGAIVVALDVFIWRP |
Ga0315905_101337114 | 3300032092 | Freshwater | MKYPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFVWRP |
Ga0315905_104546011 | 3300032092 | Freshwater | MKHPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0315905_105122403 | 3300032092 | Freshwater | MKYPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0315905_107806384 | 3300032092 | Freshwater | MKYPRTLNEAFPKTMEYGAAIEIHVVRHSTGDKAIRVLALIALIVLCLDIFIWRP |
Ga0315905_112743121 | 3300032092 | Freshwater | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIW |
Ga0334982_0290740_625_771 | 3300033981 | Freshwater | MKHPRTMNEAFHKTIEYGCAIEIHAVRHSTGDKVIRVLALVALVVLCLD |
Ga0334994_0508878_72_221 | 3300033993 | Freshwater | MNEAFPRTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0334987_0000640_19351_19521 | 3300034061 | Freshwater | MMKHPRTMNEAFHKTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDCFVWRP |
Ga0334987_0595400_334_483 | 3300034061 | Freshwater | MNEAFPHTVEYGAAIEIHVAKHSTGDKVIRVLALVALIVLALDIFIWRL |
Ga0334995_0280552_672_821 | 3300034062 | Freshwater | MNEAFHKTVEYGAAIEIHVAQHSAGDKVIRVLALVALIVLALDCFVWRP |
Ga0335010_0654229_32_205 | 3300034092 | Freshwater | MKMKYPRTMNEAFPRTVEYGAAIEIHVAQHSTGDKVIRVLALVALIVLALDIFIWRP |
Ga0335031_0090625_526_675 | 3300034104 | Freshwater | MNEAFPHTVEYGAAIEIHVAQHSTGDKVIRVLALIALIVLCLDIFIWRP |
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