Metagenome Family F100685

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Overview

Basic Information
Family ID	F100685
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	85 residues
Representative Sequence	MTRRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPAIPPDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Number of Associated Samples	51
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	85.29 %
% of genes near scaffold ends (potentially truncated)	21.57 %
% of genes from short scaffolds (< 2000 bps)	78.43 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (37.255 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (26.471 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (29.412 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.14% β-sheet: 6.25% Coil/Unstructured: 61.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08774	VRR_NUC	3.92
PF00271	Helicase_C	3.92
PF13384	HTH_23	2.94
PF13392	HNH_3	1.96
PF03592	Terminase_2	1.96
PF12705	PDDEXK_1	1.96
PF08291	Peptidase_M15_3	0.98
PF11753	DUF3310	0.98
PF04545	Sigma70_r4	0.98
PF00476	DNA_pol_A	0.98
PF00383	dCMP_cyt_deam_1	0.98
PF09636	XkdW	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.96
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.49 %
Unclassified	root	N/A	24.51 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	69.61 %
Unclassified	root	N/A	24.51 %
cellular organisms	root	All Organisms → cellular organisms	5.88 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.88 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.96 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.98 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	37.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Unclassified	root	N/A	24.51 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100300710	All Organisms → Viruses → Predicted Viral	1627	Open in IMG/M
3300004481\|Ga0069718_10087468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3550	Open in IMG/M
3300004481\|Ga0069718_15767003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	812	Open in IMG/M
3300004481\|Ga0069718_15811971	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300004481\|Ga0069718_16160675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	648	Open in IMG/M
3300004481\|Ga0069718_16230012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	888	Open in IMG/M
3300005805\|Ga0079957_1038571	All Organisms → Viruses → Predicted Viral	3060	Open in IMG/M
3300006803\|Ga0075467_10341280	Not Available	789	Open in IMG/M
3300006805\|Ga0075464_10054367	All Organisms → Viruses → Predicted Viral	2218	Open in IMG/M
3300006805\|Ga0075464_10054469	Not Available	2216	Open in IMG/M
3300006805\|Ga0075464_10078514	All Organisms → cellular organisms → Bacteria → Proteobacteria	1871	Open in IMG/M
3300006805\|Ga0075464_10202133	Not Available	1180	Open in IMG/M
3300006805\|Ga0075464_10447378	Not Available	788	Open in IMG/M
3300006805\|Ga0075464_10451916	Not Available	784	Open in IMG/M
3300006805\|Ga0075464_10620675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	666	Open in IMG/M
3300006805\|Ga0075464_10868965	Not Available	562	Open in IMG/M
3300006920\|Ga0070748_1166711	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300007276\|Ga0070747_1148137	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	845	Open in IMG/M
3300007276\|Ga0070747_1169729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	778	Open in IMG/M
3300007538\|Ga0099851_1009663	All Organisms → Viruses → Predicted Viral	3969	Open in IMG/M
3300007538\|Ga0099851_1133874	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	931	Open in IMG/M
3300007538\|Ga0099851_1182065	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
3300007538\|Ga0099851_1271392	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	603	Open in IMG/M
3300007542\|Ga0099846_1252882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	611	Open in IMG/M
3300007542\|Ga0099846_1285678	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300009081\|Ga0105098_10085746	All Organisms → Viruses → Predicted Viral	1340	Open in IMG/M
3300009081\|Ga0105098_10188092	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300009081\|Ga0105098_10732679	Not Available	528	Open in IMG/M
3300009082\|Ga0105099_10189186	All Organisms → Viruses → Predicted Viral	1174	Open in IMG/M
3300009157\|Ga0105092_10545340	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	667	Open in IMG/M
3300009157\|Ga0105092_10936972	Not Available	513	Open in IMG/M
3300009164\|Ga0114975_10021972	Not Available	3865	Open in IMG/M
3300009165\|Ga0105102_10114277	All Organisms → Viruses → Predicted Viral	1281	Open in IMG/M
3300009165\|Ga0105102_10190977	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1019	Open in IMG/M
3300009165\|Ga0105102_10194110	All Organisms → Viruses → Predicted Viral	1011	Open in IMG/M
3300009165\|Ga0105102_10246159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	909	Open in IMG/M
3300009168\|Ga0105104_10067699	All Organisms → Viruses → Predicted Viral	1931	Open in IMG/M
3300009168\|Ga0105104_10100253	All Organisms → Viruses → Predicted Viral	1560	Open in IMG/M
3300009168\|Ga0105104_10329082	Not Available	843	Open in IMG/M
3300009168\|Ga0105104_10392177	Not Available	771	Open in IMG/M
3300009169\|Ga0105097_10034587	All Organisms → Viruses → Predicted Viral	2703	Open in IMG/M
3300009169\|Ga0105097_10094587	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300009169\|Ga0105097_10127651	Not Available	1395	Open in IMG/M
3300009169\|Ga0105097_10163924	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300009169\|Ga0105097_10258540	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	960	Open in IMG/M
3300009169\|Ga0105097_10498959	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	681	Open in IMG/M
3300009419\|Ga0114982_1100569	Not Available	894	Open in IMG/M
3300010368\|Ga0129324_10095840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1285	Open in IMG/M
3300010368\|Ga0129324_10133832	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300010368\|Ga0129324_10259983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	690	Open in IMG/M
3300010368\|Ga0129324_10440152	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300010374\|Ga0114986_1059841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	688	Open in IMG/M
3300011184\|Ga0136709_1001464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4055	Open in IMG/M
3300013004\|Ga0164293_11065259	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300017777\|Ga0181357_1063697	All Organisms → Viruses → Predicted Viral	1425	Open in IMG/M
3300020048\|Ga0207193_1575542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	748	Open in IMG/M
3300022200\|Ga0196901_1002073	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9799	Open in IMG/M
3300022200\|Ga0196901_1066212	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300022200\|Ga0196901_1180666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	687	Open in IMG/M
3300025091\|Ga0209616_1006772	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300025091\|Ga0209616_1033813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523	Open in IMG/M
3300025652\|Ga0208134_1108033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	759	Open in IMG/M
3300025896\|Ga0208916_10015033	All Organisms → cellular organisms → Bacteria → Proteobacteria	3029	Open in IMG/M
3300025896\|Ga0208916_10165149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	954	Open in IMG/M
3300025896\|Ga0208916_10396038	Not Available	602	Open in IMG/M
3300025896\|Ga0208916_10542905	Not Available	506	Open in IMG/M
3300027683\|Ga0209392_1043199	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1464	Open in IMG/M
3300027693\|Ga0209704_1055019	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M
3300027710\|Ga0209599_10113464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	715	Open in IMG/M
3300027710\|Ga0209599_10117521	Not Available	702	Open in IMG/M
3300027721\|Ga0209492_1012991	All Organisms → Viruses → Predicted Viral	2804	Open in IMG/M
3300027721\|Ga0209492_1116102	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	940	Open in IMG/M
3300027721\|Ga0209492_1119826	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	924	Open in IMG/M
3300027743\|Ga0209593_10099917	Not Available	1068	Open in IMG/M
3300027743\|Ga0209593_10121821	Not Available	949	Open in IMG/M
3300027785\|Ga0209246_10103200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1118	Open in IMG/M
3300027785\|Ga0209246_10107587	All Organisms → Viruses → Predicted Viral	1094	Open in IMG/M
3300027785\|Ga0209246_10125666	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300027798\|Ga0209353_10025930	All Organisms → Viruses → Predicted Viral	2741	Open in IMG/M
3300027808\|Ga0209354_10099444	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300027808\|Ga0209354_10198190	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	814	Open in IMG/M
3300027808\|Ga0209354_10305275	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	632	Open in IMG/M
3300027969\|Ga0209191_1016871	Not Available	3700	Open in IMG/M
3300028025\|Ga0247723_1003121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8425	Open in IMG/M
3300028025\|Ga0247723_1054988	All Organisms → Viruses → Predicted Viral	1122	Open in IMG/M
3300028027\|Ga0247722_10016201	All Organisms → Viruses → Predicted Viral	3126	Open in IMG/M
3300033979\|Ga0334978_0032981	All Organisms → Viruses → Predicted Viral	2715	Open in IMG/M
3300033993\|Ga0334994_0012735	Not Available	5730	Open in IMG/M
3300033996\|Ga0334979_0116043	All Organisms → Viruses → Predicted Viral	1652	Open in IMG/M
3300034012\|Ga0334986_0152606	All Organisms → Viruses → Predicted Viral	1331	Open in IMG/M
3300034012\|Ga0334986_0586082	Not Available	533	Open in IMG/M
3300034022\|Ga0335005_0157652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1438	Open in IMG/M
3300034022\|Ga0335005_0266330	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300034062\|Ga0334995_0208138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1353	Open in IMG/M
3300034068\|Ga0334990_0038218	All Organisms → Viruses → Predicted Viral	2566	Open in IMG/M
3300034082\|Ga0335020_0012513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5053	Open in IMG/M
3300034102\|Ga0335029_0001336	Not Available	19742	Open in IMG/M
3300034102\|Ga0335029_0102501	All Organisms → Viruses → Predicted Viral	2018	Open in IMG/M
3300034104\|Ga0335031_0027360	All Organisms → Viruses → Predicted Viral	4166	Open in IMG/M
3300034106\|Ga0335036_0650640	Not Available	632	Open in IMG/M
3300034119\|Ga0335054_0276235	Not Available	992	Open in IMG/M
3300034200\|Ga0335065_0376504	Not Available	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.14%
Terrestrial	Environmental → Terrestrial	6.86%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.73%
Marine	Environmental → Aquatic → Marine	29.41%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.86%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	31.37%
Coastal	Environmental → Aquatic → Marine → Coastal	29.41%
Lake	Environmental → Aquatic → Freshwater → Lake	20.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	31.37%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.41%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	26.47%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	25.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	4.90%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.94%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010374	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17	Environmental	Open in IMG/M
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1003007104	3300002835	Freshwater	MTKRYCDTGRIDCPHLPECIWECHYDNAKLEPMTRKVKPYPIVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGAWVWSLLI*
Ga0069718_100874685	3300004481	Sediment	MTRRYCDTGRVDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWQTVGAVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0069718_157670031	3300004481	Sediment	KRYCDTGRIDCPHLPECIWDCKYDTAEVVRKIKPYPAIPPDIEPVPEKWHKVGALMLTGIMAVLALACILIFFTGLWIGSLLI*
Ga0069718_158119711	3300004481	Sediment	MTRRYCDTGRIECPHLPECIWDCKYDTAGVVKETRKVKPYPAIPPDIEPVPDTWHTVGTVMLTAIMGALAVVC
Ga0069718_161606751	3300004481	Sediment	GRVDCPHLPECGHDCHYDTAQVRKVKPYPVVPEDIEPVPDTWHTVGTLMLTAIMGALAVVCILIFFTGFWVWSLLI*
Ga0069718_162300123	3300004481	Sediment	MTKRYCDTGRIECPHLPECVWDCAYDTATVRKIKAYPIVPEDIEPAPEVWQTVGTVMLTAIMAVLAVICLALFFTGVWVWSLLI*
Ga0079957_10385715	3300005805	Lake	MTRRYCDTGRIDCPHLPECVWECAYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0075467_103412803	3300006803	Aqueous	MTRRYCDTGRVDCPHLPECIWDCKYDTATAEVVHKIKPYPAIPPDIDPVPEKWHTVGTLMLTGIMAVLAVACILIFFTGFWIWSLLI*
Ga0075464_100543672	3300006805	Aqueous	MSTRRHCDTGRVDCPHLPECVWECHYDNAVMERRRVKPYPAVPEDIQPVSEGWQTVGAFMLSAIFAVLATVCILIFFTGVWVWSLLI*
Ga0075464_100544691	3300006805	Aqueous	MSTRRHCDTGRVDCPHLPECVWECHYDTAVMERRRVKPYPAVPEDIQPVSEGWQTVGAFMLSAIFAVLATVCILIFFTGVWIWSLLI*
Ga0075464_100785141	3300006805	Aqueous	MTRYCDTGRIDCPHLPQCGIDCAYDTATVRKIKPYPAVVPDDIEPVPEVWHRVGTLMLSAIFMVLAVICIVLFFTGFYVWS
Ga0075464_102021335	3300006805	Aqueous	MTRRYCDTGRIECPHLPECIWDCKYDTATVEVVRKVKPYPAIPPDIEPVPDTWHTVGTVMLTAIMGALAVVCILIFFTGFWVWSLLI*
Ga0075464_104473782	3300006805	Aqueous	MTRRYCDTGRIDCPHLPECIWDCKYDTAVMERRKVKPYPAIPPDIEPVPEKWHKVGALMLTAIMVVLAVACILIFFTGVWVWSLLI*
Ga0075464_104519162	3300006805	Aqueous	MTKRYCDTGRIDCPHLPECIWDCKYDTATVRKLKPYPSIVPDDIEPVPDTWHTVGAVMLTAIMGVLAVACILIFFTGFWVWSLLI*
Ga0075464_106206752	3300006805	Aqueous	MTRRYCDTGRVECPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWQTVGTFMLAGIMVVLAVICLALFFTGVWIWSLLI*
Ga0075464_108689652	3300006805	Aqueous	MTRHCDTGRVDCPHLPQCIWDCKYDTAKLEPMTRKVKPYPVVPDDIEPVPEVWHRVGTMMLTAIFGALAVVCILIFFTGAWVWSLLI*
Ga0070748_11667112	3300006920	Aqueous	MTRYCDNGRIGCPHLPQCGHDCAYDTATVRKLKPYPSIVPDDIEPVPDTWHTVGAVMLTAIMGVLAVACILIFFTGFWVWSLLI*
Ga0070747_11481374	3300007276	Aqueous	QMTKRYCDTGRIDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHTVGTLMLTGIMAVLAVACILIFFTGFWIWSLLI*
Ga0070747_11697293	3300007276	Aqueous	MTRYCDNGRIGCPHLPQCGHDCAYDTATVRKLKPYPAVVPDDIEPVPEVWHRVGAFMLSAIFIVLALVCILLFFTGAWVWSLLI*
Ga0099851_10096635	3300007538	Aqueous	MTRRYCDTGRIECPCLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHTVGTVMLTGIMVVLAVACILIFFTGVWIWSLLI*
Ga0099851_11338742	3300007538	Aqueous	MTKSYCEKARIECPQLPQCLVECRYETTRKIKPYPAIPPDIEPVPDTWHTVGKLMLTAIMGALAVVCILIFFTGVWIWSLLI*
Ga0099851_11820653	3300007538	Aqueous	MNRRYCDTGRTECPHLPQCIWDCAYDNATVRKVKPYPAIPPDIEPVPDTWHTVGAVMLTAIMGALAVVCILIFFTGVWIWSLLI*
Ga0099851_12713923	3300007538	Aqueous	MTRRYCDTGRIDCPHLPECIWDCKYDTVEVVRKIKPYPAIPPDIEPVPDTWHTVGALMLTGIMAVLAVACIVIFFTGFWIWSLLI*
Ga0099846_12528823	3300007542	Aqueous	MTRHCDTGRIECPHLPECIWDCKYDTAVAERRKIKPYPAIPPDIEPVPDTWQTVGTVMLTAIMGALAVVCILIFFTGVWIWSLLI*
Ga0099846_12856781	3300007542	Aqueous	MTKRYCDTGRVDCPHLPECIWDCKYDTAEVVRKIKPYPAIPDDIEPVPDTWHTVGALMLTGIMAVLAVACILIFFTGFWIWSLLI*
Ga0105098_100857462	3300009081	Freshwater Sediment	MTRYCDTGRIDCPHLPQCIWDCAYDTATVRKIKPYPAVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI*
Ga0105098_101880924	3300009081	Freshwater Sediment	MTKRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0105098_107326793	3300009081	Freshwater Sediment	CPHLPECIWDCKYDTAVVERRKVKAYPIVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI*
Ga0105099_101891863	3300009082	Freshwater Sediment	MSNKHCYTGLDQCPHKPACVWDCERLYDQTVRKVKPYPAVPDDIEPAPDVWQTVGTAMLTAILGALAVVCILLFFTGAWIWSLLI*
Ga0105092_105453403	3300009157	Freshwater Sediment	GRIDCPHLPECIWDCKYDTAVAERRKVKPYPAIPPDIKPVPEAWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0105092_109369722	3300009157	Freshwater Sediment	MTKRYCDTGRIDCPHLPECIWDCKYDTAAAERRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0114975_100219726	3300009164	Freshwater Lake	MTRYCDTGRIDCPHLPECVWDCKYDTAIMQRRKVKPYPSIVTEDIEPVPEVWQTVGTLMITAIMAALAVVCILMFFTGFWIWSLLI*
Ga0105102_101142774	3300009165	Freshwater Sediment	PHLEADMTRRYCDTCRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPAPEAWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0105102_101909772	3300009165	Freshwater Sediment	MTKHCYTGLDECPHKPACVWDCERLYDKTIRKVKAYPIVPEDIKPVPDTWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI*
Ga0105102_101941101	3300009165	Freshwater Sediment	MTKRYCDTGRIDCPHLPECIWDCKYDTAVSERRKVKPYPAIPPDIKPVPEAWQTVGTVMLTAIMGVLAVICLALFFTGVWIWSLLI*
Ga0105102_102461591	3300009165	Freshwater Sediment	MTKRYCDTGRIDCPHLPECVWECHYYNAKLEPMVRKVKPYPAVPPDIEPVPDTWQTVGTVMLTAILGALAVVCILLFFTGAWIWSLLI*
Ga0105104_100676992	3300009168	Freshwater Sediment	MKESYCATGRIVCPHLPQCVWECRHDMAVATRKVKPYPAVVPDDIEPVPEVWHRVGTAMLTAIFGALAVVCILIFFTGAWIWSLLI*
Ga0105104_101002534	3300009168	Freshwater Sediment	MTKRYCDTGRIDCPHLPECVWDCAYDTATVRKIKAYPAVPPDIEPVPDTWQTVGTAMLTAILGALAVVCILLFFTGAWIWSLLI*
Ga0105104_103290821	3300009168	Freshwater Sediment	DCPHSPQCIWDCKYDTAVVERRKVKPYPIVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI*
Ga0105104_103921771	3300009168	Freshwater Sediment	YCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILIFFTGVWIWSLLI*
Ga0105097_100345872	3300009169	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0105097_100945874	3300009169	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDTAVVERRKVKAYPIVPEDIKPVPDTWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI*
Ga0105097_101276513	3300009169	Freshwater Sediment	MTRHCDTGRIDCPHLPECIWDCKYDTAVAERRKVKPYPAIPPDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0105097_101639245	3300009169	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDTAGMVKESRKVKPYPAIPPDIKPVPDTWQTVGTVMLTAILGALAVVCILLFFTGVWIWSLLI*
Ga0105097_102585404	3300009169	Freshwater Sediment	RTDCPHLPECIWDCKYDTAVAERRKVKPYPAIPPDIKPVPEAWQTVGTVMLTAIMGVLAVVCILLFFTGVWIWSLLI*
Ga0105097_104989592	3300009169	Freshwater Sediment	MTKRYCDTGRIDCPHLPQCIWDCKYDTATVRKIKAYPIVPEDIKPVPEAWQTVGTMMLTAIMGVLAVICLALFFTGVWIWSLLI*
Ga0114982_11005695	3300009419	Deep Subsurface	MTRRHCDTGRTECPHLPECVWECHYDNAVVERRKVKPYPVVPVDIEPVPEVWHTVGTVMLTAIFAALAAICVLMFFTGFWIWSLLI*
Ga0129324_100958401	3300010368	Freshwater To Marine Saline Gradient	MTRRYCDTGRIDCPHLPECIWDCAYDTATVRKIKPYPAIPPDIEPVPEKWHKVGAVMLTAIMGALAAVCILIFF
Ga0129324_101338321	3300010368	Freshwater To Marine Saline Gradient	GRRNVESEDSMTRRYCDTGRIECPCLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHTVGTVMLTGIMVVLAVACILIFFTGVWIWSLLI*
Ga0129324_102599831	3300010368	Freshwater To Marine Saline Gradient	MTRRYCDTGRVDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWQTVGTFMMAGVMAMIVICFALVFFTGVWIWSLLI*
Ga0129324_104401522	3300010368	Freshwater To Marine Saline Gradient	MTRRHCDTGRTECPHLPECIWECHYDNAQLEPVTRKVKPYPAVPDDIEPVPDTWQTVGTVMLTAILGALAVVCILLFFTGAWIWSLLI*
Ga0114986_10598411	3300010374	Deep Subsurface	QTIRRNAESDDSMTRRYCDTGRIECPHLPECIWDCKYDTAVAERRKVKPYPTVPDDIKPVPEAWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI*
Ga0136709_100146412	3300011184	Freshwater	MTRRYCDTGRIDCPHLPECIWDCAYDTAVMERRKVKPYPAIPDDIEPVPDTWHTVGTVMLTAIMGALAVVCVLIFFTGFWIWSLLI*
Ga0164293_110652592	3300013004	Freshwater	MTKRYCDTGRIDCPHLPECIWDCKYDTAVVERRKVKAYPIVPEDIKPVPEAWQTVGTMMLTAIMGVLAVICLTLFFTGVWIWSLLI*
Ga0181357_10636971	3300017777	Freshwater Lake	MTKRYCDTGRVDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWHTVGTVMLTGIMAVLAVACILIFFTGVWVWSLLI
Ga0207193_15755422	3300020048	Freshwater Lake Sediment	MTKRYCDTGRIDCPHLPECIWDCKYDTAVAERRKVKPYPAIPPDIKPVPEAWQTVGTVMLTAIMGALAVVCILLFFTGAWIWSLLI
Ga0196901_100207312	3300022200	Aqueous	MTRRYCDTGRIECPCLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHTVGTVMLTGIMVVLAVACILIFFTGVWIWSLLI
Ga0196901_10662123	3300022200	Aqueous	MTKSYCEKARIECPQLPQCLVECRYETTRKIKPYPAIPPDIEPVPDTWHTVGKLMLTAIMGALAVVCILIFFTGVWIWSLLI
Ga0196901_11806663	3300022200	Aqueous	MTRYCNTGRIDCPHLPECGHDCAYDTATVRKLKPYPAVVPDDIEPVPEVWHRVGAFMLSAIFIVLALVCILLFFTGAWVWSLLI
Ga0209616_10067724	3300025091	Freshwater	MTRRYCDTGRIDCPHLPECIWDCAYDTAVMERRKVKPYPAIPDDIEPVPDTWHTVGTVMLTAIMGALAVVCVLIFFTGFWIWSLLI
Ga0209616_10338132	3300025091	Freshwater	MSNKHCYTGLDHCPHKPACVWDCERLYDQTTRRVKPYPAVPPDIEPVPEVWQTVGTVMLTAVFGALAVVCILLFFTGAWVWSLLI
Ga0208134_11080331	3300025652	Aqueous	MTRYCDNGRIGCPHLPQCGHDCAYDTATVRKLKPYPAVVPDDIEPVPEVWHRVGAFMLSAIFIVLALVCILLFFTGAWVWSLLI
Ga0208916_100150334	3300025896	Aqueous	MTRYCDTGRIDCPHLPQCGIDCAYDTATVRKIKPYPAVVPDDIEPVPEVWHRVGTLMLSAIFMVLAVICIVLFFTGFYVWSLLI
Ga0208916_101651492	3300025896	Aqueous	MSTRRHCDTGRVDCPHLPECVWECHYDNAVMERRRVKPYPAVPEDIQPVSEGWQTVGAFMLSAIFAVLATVCILIFFTGVWVWSLLI
Ga0208916_103960383	3300025896	Aqueous	MSTRRHCDTGRVDCPHLPECVWECHYDTAVMERRRVKPYPAVPEDIQPVSEGWQTVGAFMLSAIFAVLATVCILIFFTGVWIWSLLI
Ga0208916_105429052	3300025896	Aqueous	SMTRRYCDTGRVDCPHLPECIWDCKYDTAVMERRKVKPYPAIPPDIEPVPEKWHKVGALMLTAIMVVLAVACILIFFTGVWVWSLLI
Ga0209392_10431995	3300027683	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDTAIAERRKVKAYPIVPVDIKPVSDGWQTVGTVMLTAIMGALAVVCILLFFTGV
Ga0209704_10550195	3300027693	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPAIPPDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0209599_101134643	3300027710	Deep Subsurface	QTIRRNAESDDSMTRRYCDTGRIECPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWQTVGTFMLAGIMVVLAVICLALFFTGVWIWSLLI
Ga0209599_101175211	3300027710	Deep Subsurface	MTRRHCDTGRTECPHLPECVWECHYDNAVVERRKVKPYPVVPVDIEPVPEVWHTVGTVMLTAIFAALAAICVLMFFTGFWIWSLLI
Ga0209492_10129913	3300027721	Freshwater Sediment	MTRRHCDTGRTECPHLPQCVWECRHEMAVATRKVKPYPVVPVDIEPAPELWQTVGTVMLTAVFGALAVICILLFFTGAWVWSLLI
Ga0209492_11161022	3300027721	Freshwater Sediment	MTKHCYTGLDECPHKPACVWDCERLYDKTIRKVKPYPIVPEDIKPVPDTWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI
Ga0209492_11198263	3300027721	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0209593_100999171	3300027743	Freshwater Sediment	MKESYCATGRIVCPHLPQCVWECRHDMAVATRKVKPYPAVVPDDIEPVPEVWHRVGTAMLTAIFGALAVVCILIFFTGAWIWSLLI
Ga0209593_101218212	3300027743	Freshwater Sediment	MTRRYCDTGRIDCPHLPECIWDCKYDNATVRKVKPYPIVPVDIKPVPDTWQTVGTVMLTAIMGALAVVCILIFFTGVWIWSLLI
Ga0209246_101032004	3300027785	Freshwater Lake	MTKRYCDTGRVECPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPDTWHTVGTVMLTGIMAVLAVACILIFFTGVWVWSLLI
Ga0209246_101075876	3300027785	Freshwater Lake	MTKRYCDTGRVDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHKVGTVMLTGIMVVLAVACIMIFFTGVWIWSLLI
Ga0209246_101256664	3300027785	Freshwater Lake	PQCIWDCKYDTAKLEPMIRKVKPYPVVPDDIEPVPEVWHRVGTMMLTAIFGALAVVCILIFFTGVWIWSLLI
Ga0209353_100259302	3300027798	Freshwater Lake	MTKRYCDTGRIDCPHLPECIWDCKYDNAVMERRKVKPYPAIPPDIEPVPDTWHTVGTVMLTAIMGALAVVCILIFFTGFWIWSLLI
Ga0209354_100994445	3300027808	Freshwater Lake	MTRRYCDTGRIDCPHLPECIWDCAYDTATVRKIKPYPAIPPDIEPVPDTWHTVGTVMLTAIMGALAVVCILIFFTGFWIWSLLI
Ga0209354_101981902	3300027808	Freshwater Lake	MTKRYCDTGRVDCPHLPECIWDCKYDTATVEVVRKIKPYPAIPPDIEPVPEKWHTVGALMLTGIMVVLAVACILIFFTGVWIWSLLI
Ga0209354_103052753	3300027808	Freshwater Lake	MSTRRHCDTGRVDCPHLPECVWECHYDTAVMERRRVKPYPAVPEDIEPVPEKWHTVGTVMLTGIMAVLAVACILIFFTGVWVWSLLI
Ga0209191_10168717	3300027969	Freshwater Lake	MTRYCDTGRIDCPHLPECVWDCKYDTAIMQRRKVKPYPSIVTEDIEPVPEVWQTVGTLMITAIMAALAVVCILMFFTGFWIWSLLI
Ga0247723_100312119	3300028025	Deep Subsurface Sediment	MTRRHCDTGRIDCPHLPQCVWDCAYDTATVRKVKPYPVVPDDIEPVPEVWHRVGTMMLTAIFGVLAVVCILIFFTGIWIWSLLI
Ga0247723_10549883	3300028025	Deep Subsurface Sediment	MTKRYCDTGRVDCPHVPECIWDCAYESGVMTPMMRKVKPYPVVPEDIDPMPEQWHTMGKFVIGAIMGVLAVICLALFFTGVWIWSLLI
Ga0247722_100162012	3300028027	Deep Subsurface Sediment	MTKRYCDTGRVECPHLPECIWECHYDTATVEVVRKIKPYPAIPPDIEPVPDTWHTVGTLMLTAIMGALAVVCILIFFTGFWIWSLLI
Ga0334978_0032981_1613_1873	3300033979	Freshwater	MTRRFCDTGRIDCPHLPECIWDCKYDTAVAERRRVKPYPAIPPDIKPVPEAWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0334994_0012735_1391_1657	3300033993	Freshwater	MTKRYCDTGRIDCPHLPECIWECHYDNAKLEPMTRKVKPYPIVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGAWVWSLLI
Ga0334979_0116043_710_970	3300033996	Freshwater	MTKRYCDTGRIDCPHLPECIWDCKYDTAVVERRKVKAYPIVPEDIKPVPEAWQTVGTMMLTAIMGVLAVICLTLFFTGVWIWSLLI
Ga0334986_0152606_768_1028	3300034012	Freshwater	MTRRFCDTGRIDCPHLPECIWDCKYDTAVAERRKVKPYPIVPVDIKPVPEAWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0334986_0586082_2_262	3300034012	Freshwater	MTRRFCDTGRIDCPHLPECIWDCKYDTAVAERRRVKPYPAIPSDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0335005_0157652_2_241	3300034022	Freshwater	MTRRYCDTGRIDCPHLPECIWDCAYDTATVRKIKAYPIVPEDIEPVPDTWQTVGGLMLTGIMAVLAVACILIFFTGVWVW
Ga0335005_0266330_155_418	3300034022	Freshwater	MTRRYCDTGRIECPHLPECIWDCKYDTATVEVVRKVKPYPAIPPDIEPVPDTWHTVGTVMLTAIMGALAVVCILIFFTGFWVWSLLI
Ga0334995_0208138_3_230	3300034062	Freshwater	MTRRYCDTGRIDCPHLPECIWDCKYDTAVAERRKVKPYPTVPDDIKPVPETWQTVGTVMLTAIMGALAVVCILLFF
Ga0334990_0038218_898_1164	3300034068	Freshwater	MTKRYCDTGRIDCPHLPECIWDCKYDTAGMVKESRKVKPYPAIPSDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0335020_0012513_2716_2976	3300034082	Freshwater	MTRRFCDTGRIECPHLPECIWDCKYDTAIAERRKVKAYPIVPVDIKPVSDGWQTVGTVMLTAIMGALAVVCILLFFTGVWIWSLLI
Ga0335029_0001336_4562_4816	3300034102	Freshwater	MTKRYCDTGRIDCPHLPQCIWDCAYDTATVRKVKAYPIVPEDIKPVPEAWQTVGTAMLTAIMGVLAVVCILIFFTGVWIWSLLI
Ga0335029_0102501_1724_1981	3300034102	Freshwater	MTRHCDTGRIDCPHLPQCIWDCKYDTAVVERRKVKAYPIVPEDIKPVPEAWQTVGTAMLTAIMGVLAVICLALFFTGVWIWSLLI
Ga0335031_0027360_3292_3552	3300034104	Freshwater	MTKRYCDTGRIDCPHLPECIWDCKYDTAVVERRKVKAYPIVPEDIKPVPEAWQIIGSVLVGFGIVALAVICILLFFTGVWIWSLLI
Ga0335036_0650640_16_270	3300034106	Freshwater	MTRRYCDTGRVDCPHLPECVWECHYDNAEVRKIKPYPAIFVDIEPVPDTWHTVGTVMLTAIMGALAAICILIFFTGFWVWSLLI
Ga0335054_0276235_501_761	3300034119	Freshwater	MTRRFCDTGRIECPHLPECIWDCKYDTAIAERRKVKAYPIVPVDIKPVSDGWQTVGTVMLTAIMGALAVVCVLLFFTGVWIWSLLI
Ga0335065_0376504_395_649	3300034200	Freshwater	MTKSYCEKARIECPQLPQCLVECRYDNATVRKVKPYPAIPPDIKPVPDTWQTVGTVMLTAIMGALAVVCILLFFTGVWVWSLLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences