Basic Information | |
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Family ID | F100682 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 39 residues |
Representative Sequence | MPEATAEDWAKQNKLRQEWLAANPDAEYEGWMSI |
Number of Associated Samples | 54 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 47.52 % |
% of genes near scaffold ends (potentially truncated) | 17.65 % |
% of genes from short scaffolds (< 2000 bps) | 93.14 % |
Associated GOLD sequencing projects | 51 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.41 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (79.412 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (21.569 % of family members) |
Environment Ontology (ENVO) | Unclassified (77.451 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (76.471 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 27.42% β-sheet: 0.00% Coil/Unstructured: 72.58% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.41 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Sediment Freshwater Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater Lake Freshwater Freshwater Aqueous Estuary Water Estuarine |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J29590_1101121 | 3300002278 | Freshwater | WDTNVMPIATAADWAKQNELRQEWLANNPDATYIGWTSI* |
B570J29032_1095162941 | 3300002408 | Freshwater | MPIATTEDWARQNKMRQEWLAANPDAEYEGWMSI* |
Ga0068877_101217302 | 3300005525 | Freshwater Lake | MPIATAEDWAKQNKLRQECLANNPDATYIGWTSI* |
Ga0068877_106704491 | 3300005525 | Freshwater Lake | MDGARMPEATAEDWAKQNKLRQEWLAANPDAEYEGWMSI* |
Ga0068877_107372912 | 3300005525 | Freshwater Lake | IAHLGLSSRVVAGVRMPEATAEDWAKQNKLRQEWLANNPNAEYEGWMSI* |
Ga0068876_101131542 | 3300005527 | Freshwater Lake | MPIATAEDWIKQNKLRQEWLDNNPDAQYLGWVSI* |
Ga0068876_101657532 | 3300005527 | Freshwater Lake | VVAGARMPEATAEDWAKQNQLREEWLANNPDAEYIGWMSI* |
Ga0068876_103572502 | 3300005527 | Freshwater Lake | MPIAKAEDWARQNKMRQEWLAVNPDAEYEGWMSI* |
Ga0068876_103734712 | 3300005527 | Freshwater Lake | VVDGGGMPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI* |
Ga0068872_103070362 | 3300005528 | Freshwater Lake | MPIATAEDWARQNKMRQEWLDANPDAEYEGWMSI* |
Ga0068872_103273112 | 3300005528 | Freshwater Lake | VAVGVRMPETTAEDWAKQNKLRQEWLANNPNAEYEGWMSI* |
Ga0068872_107517971 | 3300005528 | Freshwater Lake | MPIATAEDWAKQNKLRQEWLANNPDATYIGWTSI* |
Ga0049081_101572741 | 3300005581 | Freshwater Lentic | YLRVADGARMPEATALDWAKQNALREQWLIDNPDAQYIGWMSI* |
Ga0079957_101971013 | 3300005805 | Lake | MPIATAEDWARQNKMRQEWLAANPDAEYEGWMSI* |
Ga0079957_10887832 | 3300005805 | Lake | MPIATAEDWARQNKMRQEWLTAHPDAEYEGWMSI* |
Ga0079957_11169292 | 3300005805 | Lake | MPVATAEDWIKQNKLRQEWLDNNPDAQYLGWVSI* |
Ga0079957_11848484 | 3300005805 | Lake | MPIATAEDWAKQNKLRQEWLADNPDAEYEGWMSI* |
Ga0079957_12945261 | 3300005805 | Lake | VAVGPRMPEATAEDWAKQNQLRQEWLANNPDADYIGWTSI* |
Ga0075467_104080252 | 3300006803 | Aqueous | VADGVRMPEATAEDWAKQNALREQWLIDNPDAQYIGWMSI* |
Ga0075458_101171321 | 3300007363 | Aqueous | LGLSSKVVDGGRMPEATPEDWARQNKMRQEWLAAHPDAEYEGWMSI* |
Ga0102861_10901872 | 3300007544 | Estuarine | MMAENDIDWEWQNALREEWLANNPDAEYQGWLSI* |
Ga0104986_164714 | 3300007734 | Freshwater | MPVATAEDWIKQNKLRQEWLAANPDATYIGWTSI* |
Ga0105746_11293371 | 3300007973 | Estuary Water | ESIAHLGLYLRVADGVRMPEATAADWAKQNKLRQKWLAANPDADYIGWTSI* |
Ga0105747_11591221 | 3300007974 | Estuary Water | VVAGVRMPEATAEDWAKQNKLRQEWLAANPDADYIGWTSI* |
Ga0114339_10976293 | 3300008106 | Freshwater, Plankton | MPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI* |
Ga0114340_11929811 | 3300008107 | Freshwater, Plankton | MPIATAEDWAKQNKLRQEWLAANPDATYIGWTSI* |
Ga0114340_12527341 | 3300008107 | Freshwater, Plankton | VAVGVRMPEATAEDWARQNKMRQEWLANNPDATYIGWTSI* |
Ga0114340_12581151 | 3300008107 | Freshwater, Plankton | MPEATPEDWARQNKMRQEWLAANPDAEYEGWMSI* |
Ga0114347_10109232 | 3300008114 | Freshwater, Plankton | MPIATAEDWAKQNKLRQEWLADNPDATYIGWTSI* |
Ga0114355_11709401 | 3300008120 | Freshwater, Plankton | MPEATAEDWAKQNQLREEWLANNPDAEYIGWMSI* |
Ga0114841_10995231 | 3300008259 | Freshwater, Plankton | MPIATAEDWAKQNELRQEWLANNPDATYIGWTSI* |
Ga0114336_11583754 | 3300008261 | Freshwater, Plankton | VRLGLSSRVAVGVRMPEATAEDWAKQNKMRQEWLAANPDADYIGWTSI* |
Ga0114353_12189021 | 3300008264 | Freshwater, Plankton | MPIATAEDWAKQNKLRQELLANNPDATYIGWTSI* |
Ga0114363_10992811 | 3300008266 | Freshwater, Plankton | MPIATAEDWVKQNKMRQEWLDANPDAEYEGWMSI* |
Ga0114363_11009061 | 3300008266 | Freshwater, Plankton | MPIATAEDWAEQNKLRQEWLANNPDATYIGWTSI* |
Ga0114363_11110333 | 3300008266 | Freshwater, Plankton | MPIATAEDWAKQNKMRQEWLDANPDAEYEGWMSI* |
Ga0114363_11189502 | 3300008266 | Freshwater, Plankton | VADGARMPEATAEDWAKQNQLRQEWLANNPDADYIGWTSI* |
Ga0114363_11507232 | 3300008266 | Freshwater, Plankton | VVAGVRMPEATAEDWAKQNKLRQEWLANNPDAAYIGWTSI* |
Ga0114363_11511543 | 3300008266 | Freshwater, Plankton | MPIATAEDWARQNKMRQEWLDAHPDAEYEGWMSI* |
Ga0114363_11542242 | 3300008266 | Freshwater, Plankton | VADGARMPEATAEDWAKQNQLRQEWLANNPDAEYEGWMSI* |
Ga0114363_11591921 | 3300008266 | Freshwater, Plankton | MPIATAEDWAKQNKLRQEWLANNADATYIGWTSI* |
Ga0114363_11766173 | 3300008266 | Freshwater, Plankton | MPVATAEDWAKQNKLRQEWLANNPDATYIGWTSI* |
Ga0114363_12085711 | 3300008266 | Freshwater, Plankton | MPIATAEDWAKQNKMRQEWLDANPDADYEGWMSI* |
Ga0114363_12177931 | 3300008266 | Freshwater, Plankton | VHLGLSSKVVAGGRMPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI* |
Ga0114363_12230342 | 3300008266 | Freshwater, Plankton | MMPIATAEDWAQQNKLREEWLEANPNAEYEGWMSI* |
Ga0114363_12430211 | 3300008266 | Freshwater, Plankton | VHLGLSLKVGDGGRMPEATPEDWARQNKMRQEWLAANPDAE |
Ga0114878_11667292 | 3300008339 | Freshwater Lake | MPEATAEDWAKQNKLRQEWLANNPDAAYIGWTSI* |
Ga0114878_12643852 | 3300008339 | Freshwater Lake | VADGVRMPEATAEDWAKQNKLRQEWLANNPDATYIGWTSI* |
Ga0114876_10887683 | 3300008448 | Freshwater Lake | VHLGSSSKVVDGGRMPEVTPEDWARQNKMRQEWLAANPDAEYEGWMSI* |
Ga0114876_11023642 | 3300008448 | Freshwater Lake | MPEATAEDWARQNKMRQEWLNANPNAEYEGWMSI* |
Ga0114876_11111652 | 3300008448 | Freshwater Lake | MPIATAEDWAKQNKLRQEWLINNPDATYIGWTSI* |
Ga0114876_11969381 | 3300008448 | Freshwater Lake | VAVGAKMPEATAEDWAKQNKLRQEWLANNPNADYIGWTSI* |
Ga0114876_12319922 | 3300008448 | Freshwater Lake | VHLGLSLKVVDGGRMPEATPEDWARQNKMRQEWLAANPDAEYEGWMSI |
Ga0114876_12507302 | 3300008448 | Freshwater Lake | MPEATAEDWAKQNKLRQEWLAANPDAEYEGWMSI* |
Ga0114876_12617212 | 3300008448 | Freshwater Lake | MPIATAEDWVKQNKLRQEWLANNPDAEYEGWMSI* |
Ga0114880_10468206 | 3300008450 | Freshwater Lake | MPEATAEDWVKQNKLRQEWLAANPDATYIGWTSI* |
Ga0114880_10949844 | 3300008450 | Freshwater Lake | MPIATAEDWAKQNKLRQEWLAANPDAEYEGWMSI* |
Ga0114880_10953053 | 3300008450 | Freshwater Lake | MPIATAEDWAKHNKLRQEWLDANPDAEYEGWMSI* |
Ga0114880_11383951 | 3300008450 | Freshwater Lake | MPIATPEDWAKQNKMRQEWLDANPDAEYEGWMSI* |
Ga0114880_11407492 | 3300008450 | Freshwater Lake | VHLGSFSKVVAGGRMPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI* |
Ga0114880_11909561 | 3300008450 | Freshwater Lake | VHLDSSSKVVDGGRMPEATPEDWARQNKMRQEWLAAHPDADYIGWTSI* |
Ga0114880_12020391 | 3300008450 | Freshwater Lake | AGGRMPEATAEDWVKQNKMRQEWLAANPDAEYEGWMSI* |
Ga0114880_12052921 | 3300008450 | Freshwater Lake | VADGARMPEATAEDWAKQNKLRQEWLANNPDATYIGWTSI* |
Ga0105103_107456081 | 3300009085 | Freshwater Sediment | VAGVRMPEATAEDWAKQNKLRQEWLANNPDADYIGWTSI* |
Ga0114978_103279283 | 3300009159 | Freshwater Lake | ALNVIYKCQGCTAHLVSYSKVADGVRMPEATAADWAYQNALRKQWLIDNPDAQYLGWVSI |
Ga0114981_104910242 | 3300009160 | Freshwater Lake | SYSKVADGVRMPEATAADWARQNALREQWLIDNPDAQYIGWMSI* |
Ga0105097_102775483 | 3300009169 | Freshwater Sediment | MPEATAEDWAKQNQLRQEWLANNPDATYIGWTSI* |
Ga0114974_101010384 | 3300009183 | Freshwater Lake | VADGVRMPEATAEDWAKQNALHEQWLLDNPDAKYLGWVSI* |
Ga0114976_102877273 | 3300009184 | Freshwater Lake | QECIAHLVSYSKVADGVRMPEATAADWAKQNALREQWLIDNPDAQYLGWVSI* |
Ga0164293_103259522 | 3300013004 | Freshwater | VVAGVKMPEATAEDWAKQNKLRQEWLANNPDAEYIGWMSI* |
Ga0164293_108436852 | 3300013004 | Freshwater | VGVGVKMPEATAEDWLKQNKLRQEWLADNPDAEYIGWMSI* |
(restricted) Ga0172367_100381573 | 3300013126 | Freshwater | MPVATPEDWIKQIQMRQEWLEANPNAEYIGWTSI* |
(restricted) Ga0172367_103772002 | 3300013126 | Freshwater | MPEMTAEDWQKQNELRKQWLLENPDAEYIGWTSI* |
(restricted) Ga0172367_104036891 | 3300013126 | Freshwater | MPEATPEDWIKQNQMRLEWLEANPDAEYEGWMSI* |
(restricted) Ga0172367_104975152 | 3300013126 | Freshwater | MPEATPEDWIKQNQMRQEWLEANPDAEYIGWTSI* |
(restricted) Ga0172367_105239621 | 3300013126 | Freshwater | MPEATPEDWIKQNELRKQWLLDNPDAEYIGWTSI* |
(restricted) Ga0172373_103798092 | 3300013131 | Freshwater | MPEATREDWIKQNQMRQEWLEANPDAEYEGWMSI* |
Ga0177922_110768051 | 3300013372 | Freshwater | MPIATAEDWAKQNKMRQEWLAANPDAEYEGWMSI* |
(restricted) Ga0172376_102191792 | 3300014720 | Freshwater | MGESTDIDWAYQEKLRQEWLAANPDAQYPGWTSI* |
Ga0208364_10233011 | 3300020533 | Freshwater | VVAGVKMPEATAEDWAKQNKLRQEWLANNPDATYIGWTSI |
Ga0207939_10221563 | 3300020536 | Freshwater | CTAHLVSYLKVADGVRMAEATAEDWAKQNALRAQWLIDNPDAQYIGWMSI |
Ga0208147_11450012 | 3300025635 | Aqueous | AHLGLSSKVVDGGRMPEATPEDWARQNKMRQEWLAAHPDAEYEGWMSI |
Ga0255082_10480722 | 3300027139 | Freshwater | SKVADGVRMPEATAEDWAKQNALREQWLIDNPDAHYLGWVSI |
Ga0209246_101955241 | 3300027785 | Freshwater Lake | ECTAHLVLYLKVADGVRMAEATAEDWAKQNELHKQWLIDNPDAQYIGWMSI |
Ga0209972_104070361 | 3300027793 | Freshwater Lake | VVDGGGMPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI |
Ga0209990_101113143 | 3300027816 | Freshwater Lake | VVAGARMPEATAEDWAKQNQLREEWLANNPDAEYIGWMSI |
Ga0315900_103140931 | 3300031787 | Freshwater | VADGARMPEATAEDWAKQNQLRQEWLANNPDAEYEGWMSI |
Ga0315900_109753741 | 3300031787 | Freshwater | VVAGVRMPEATAEDWARQNKMRQEWLNANPNAEYEGWMSI |
Ga0315909_105605252 | 3300031857 | Freshwater | VHLGSFSKVVAGGRMPEATPEDWARQNKMRQEWLDAHPDAEYEGWMSI |
Ga0315906_107189002 | 3300032050 | Freshwater | VVAGVRMPEATAEDWAKQNKLRQEWLANNPDAAYIGWTSI |
Ga0315903_101498865 | 3300032116 | Freshwater | VADGVRMPEATAEDWAKQNKLRQEWLANNPDATYIGWTSI |
Ga0315903_106706041 | 3300032116 | Freshwater | VAVGARMPEATAEDWARQNKMRQEWLANNPDADYIGWTSI |
Ga0335005_0772402_283_405 | 3300034022 | Freshwater | VVAGVKMPEATAEDWAKQNKMRQEWLANNPNADYIGWTSI |
Ga0334987_0168727_347_493 | 3300034061 | Freshwater | MHLGLSSRVVAGVRMPEATAEDWAKQNKLRQEWLANNPDADYIGWTSI |
Ga0334995_0239440_937_1056 | 3300034062 | Freshwater | VAGVKMPEATAEDWVIQNKLRQEWLADNPDADYIGWTSI |
Ga0335027_0381463_766_921 | 3300034101 | Freshwater | ESIAHLGLSSRVVAGVRMPEATTEDWALQNKMRQEWLNANPNAEYEGWMSI |
Ga0335027_0503038_80_199 | 3300034101 | Freshwater | MAGARMPEATAEDWAKQNKLRQEWLANNPDADYIGWTSI |
Ga0335027_0562964_531_650 | 3300034101 | Freshwater | VAGVKMPEATAEDWAKQNKLRQEWLAANPNADYIGWTSI |
Ga0335029_0053334_413_559 | 3300034102 | Freshwater | MHLGLYLRVVAGVRMPEATAEDWAKQNKLRQEWLANNPDADYIGWTSI |
Ga0335036_0330681_398_517 | 3300034106 | Freshwater | VAGVKMPEATAEDWAKQNKLRQEWLANNPDATYIGWTSI |
Ga0335063_0199301_778_897 | 3300034111 | Freshwater | VAGVKMPEATAEDWAKQNKLRQEWLANNPDADYIGWTSI |
Ga0335048_0616653_347_499 | 3300034356 | Freshwater | YIAHLVLYSKVAVGVRMPEATTEDWALQNKLREEWLANNPDAQYMGWVSI |
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