NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F100563

Metagenome / Metatranscriptome Family F100563

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100563
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 73 residues
Representative Sequence VVTSATTPERAERAAQGGEDATRPLGSRTIALKFVVTKLDGLVGSRVAVSGLLIGEGGVDGINVTTVSRVAPKCP
Number of Associated Samples 85
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 98.04 %
% of genes from short scaffolds (< 2000 bps) 89.22 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.255 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.549 % of family members)
Environment Ontology (ENVO) Unclassified
(22.549 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.078 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.
1Ga0062387_1017820621
2Ga0058899_122725152
3Ga0070713_1005203501
4Ga0070711_1006888761
5Ga0070741_100502291
6Ga0070731_108668291
7Ga0070731_109579751
8Ga0070762_104830581
9Ga0070762_111237722
10Ga0066903_1045910591
11Ga0068863_1008091991
12Ga0068862_1018298651
13Ga0075017_1012576351
14Ga0075030_1006812722
15Ga0075425_1005490151
16Ga0068865_1002418933
17Ga0105240_103068113
18Ga0105241_116622502
19Ga0105248_123399531
20Ga0116223_107907111
21Ga0136449_1030795361
22Ga0136449_1036720582
23Ga0126383_115699012
24Ga0126344_13336842
25Ga0105246_113733671
26Ga0150983_110069212
27Ga0150983_115664511
28Ga0150983_121880682
29Ga0126369_100895175
30Ga0157370_109390763
31Ga0157378_113587102
32Ga0181528_108293582
33Ga0181531_108420802
34Ga0181531_109015482
35Ga0181526_109344942
36Ga0163163_117189962
37Ga0137414_12149388
38Ga0132257_1004609552
39Ga0182039_112206731
40Ga0181505_108173322
41Ga0187801_102143561
42Ga0187808_100309733
43Ga0181520_102530992
44Ga0187804_100742431
45Ga0187771_101809113
46Ga0181510_10933551
47Ga0181502_11591983
48Ga0181508_10659591
49Ga0206352_105498383
50Ga0210399_109457662
51Ga0210401_101390693
52Ga0210401_103002612
53Ga0210388_101809466
54Ga0210388_108862002
55Ga0213876_104834102
56Ga0210393_105747681
57Ga0210385_102932831
58Ga0210394_107509601
59Ga0210394_110098781
60Ga0210409_111851772
61Ga0242648_10297482
62Ga0242659_10918502
63Ga0242659_11403901
64Ga0242655_100377212
65Ga0242655_101719911
66Ga0242662_101914731
67Ga0242670_10730622
68Ga0242657_11037712
69Ga0242657_12364051
70Ga0242657_12536401
71Ga0207656_100388901
72Ga0207656_103895041
73Ga0207645_100822253
74Ga0207663_106283111
75Ga0207662_109603962
76Ga0207649_103393722
77Ga0207652_107589791
78Ga0207704_103578612
79Ga0209008_10722401
80Ga0209275_108130222
81Ga0311340_110963941
82Ga0311338_111465502
83Ga0302177_100192673
84Ga0302177_103748532
85Ga0302177_106532092
86Ga0311353_116292931
87Ga0302183_104367172
88Ga0210257_100961652
89Ga0311356_101908833
90Ga0302307_104669341
91Ga0170818_1101262872
92Ga0302326_105244163
93Ga0318561_101584462
94Ga0310686_1162240262
95Ga0310813_118264382
96Ga0306917_112747151
97Ga0306919_103459471
98Ga0316035_1136002
99Ga0318559_102335911
100Ga0335081_114059391
101Ga0335077_101247703
102Ga0335077_117992502
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 2.91%    β-sheet: 27.18%    Coil/Unstructured: 69.90%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VVTSATTPERAERAAQGGEDATRPLGSRTIALKFVVTKLDGLVGSRVAVSGLLIGEGGVDGINVTTVSRVAPKCPSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
87.3%12.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Palsa
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Plant Roots
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Boreal Forest Soil
3.9%4.9%2.9%2.9%2.9%2.9%22.5%2.9%2.9%4.9%2.9%2.9%9.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062387_10178206213300004091Bog Forest SoilENVAPGGGDAARALGNRTMTLKFVVTHLDPLSGSRVAVTGLLIGAGGADGINVTTVNRVAQKCP*
Ga0058899_1227251523300004631Forest SoilWVVTSATRPERAERAAQGGEDATRPLGSRTMTLKYVITHLDALAGSRVAVSGLLIGDDGADGINVTAVNRVAQKCP*
Ga0070713_10052035013300005436Corn, Switchgrass And Miscanthus RhizosphereVAPGGDDATRPLGSRTMALKFVVTKLDALAGSRVAVSGLLIGAGGADGINVTTVSRVAPKCP*
Ga0070711_10068887613300005439Corn, Switchgrass And Miscanthus RhizosphereGADWVVTSATTPERAERAASGGEDATRPLGSRTMALKFVVTKLDALVGSRVAVSGLLIGEGGVDGINVTIVNRVAPKCP*
Ga0070741_1005022913300005529Surface SoilGGEDATRPLGSRTMPLKFLVTKLDALAGSRVAVSGLLIGAGGVDGINVTTVNRVAEKCP*
Ga0070731_1086682913300005538Surface SoilAASGGEDATRPLGSRTMPLKFVITRLDAWAGSRVAVSGLLIGAGGVDGINVTAVNRVAEKCP*
Ga0070731_1095797513300005538Surface SoilVGCLARSGADWVVTKATTPERAETATGADATRPLGNRTMTLKFVVTHLDQLSGSRVAVTGLLIGAGGADGINVTTVNRVAEKCP*
Ga0070762_1048305813300005602SoilDWVVTRATIPERAEHASGGDDATRPLGSRTIPLKFVVTRLDPWSGSRVVVSGLLIGADGADGINVTAVARVAEKCP*
Ga0070762_1112377223300005602SoilPERAERAPGGDATKPLGNRTIPLKFVVTRLDPLAGSRVAVSGLLIGADGADGINVTTVSRVAEKCP*
Ga0066903_10459105913300005764Tropical Forest SoilRVIGCLARSGADWVVTSATTPERAERAAPSGEDATRPLGSRTMALKFVVTKLDSLAGSRVAVSGLLIGAGGVDGINVTAVNRVAEKCP*
Ga0068863_10080919913300005841Switchgrass RhizosphereLARVVGCLARSGADPANWVVTRATTPERAERAAATEEEATKPLGSRTMTLKFVVTRLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP*
Ga0068862_10182986513300005844Switchgrass RhizosphereTPERAERSAAGAEDAARPLGSRKIALKFVVTKLDGLAGSRVAVSGLLIGEGGMDGINVTAVNRIAPKCP*
Ga0075017_10125763513300006059WatershedsAESAARAGDEDATRPLGNRTMALKFVVTRLDAWVGSRVAVSGLLIGEGGVDGINVTAVNRVAQKCP*
Ga0075030_10068127223300006162WatershedsARSGADWVVTSATNPERAERAPRAGDEDAGRPLGSRTIPLKFVVTKLDTWAGSRVAVNGLLIGEGGVDGINVTAVNRVAPKCP*
Ga0075425_10054901513300006854Populus RhizosphereVVTSATPPERAERAVSAGDDAARPLGSRTIALKFVITRLDALAGSRVAVSGLLMGEGGVDGINVTTVNRVAQKCP*
Ga0068865_10024189333300006881Miscanthus RhizosphereGEDAARPLGNRTIALKFVITRLDALTGSRVAVSGLLMGEGGVDGINVTTVNRVAQKCP*
Ga0105240_1030681133300009093Corn RhizosphereWVVTNATTPERVERTASGGDDATRSLGSRTMALKFVVTKLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP*
Ga0105241_1166225023300009174Corn RhizosphereERAPHEGAGGEDATRPLGSRRMVLKYVVTKLDALAGSRVAVNGLLIGEGGVDGINVTTVNRVAAKCP*
Ga0105248_1233995313300009177Switchgrass RhizosphereGGDWVVTSATTPERAERATAGGEDAARPLGTRTIVLKFVITKLDAMVGSRVSVSGLLIGEGGVDGINVTTVNRVAQKCP*
Ga0116223_1079071113300009839Peatlands SoilGGDYATRPLGNRTIPLKFVVTHLDPLAGSRVVVNGLLIGDGGADGINVTTVNRVAEKCP*
Ga0136449_10307953613300010379Peatlands SoilRVAPGGDDATRPLGSRTMPLKFVVTHLDALAGSRVAVSGLLIGAGGVDGINVTAVSRVAQHCP*
Ga0136449_10367205823300010379Peatlands SoilPTAAGADATRPLGNRTIPLKFVVTRLDALSGSRVAVSGLLIGADGVDGINVTAVNRVAEKCP*
Ga0126383_1156990123300010398Tropical Forest SoilAEGVFSDVEDAARPLGTRTMPLKFVVTRLDSLAGSRVVASGLLIGTDGEEGLNVTTVSRVAAKCP*
Ga0126344_133368423300010866Boreal Forest SoilKSGADWVVTSATRPERAERAVQGGEDAARPLGSRTMTLKYVVTHLDALAGSRVAVSGLLIGDDGADGINVTTVNRVAPKCP*
Ga0105246_1137336713300011119Miscanthus RhizosphereTTPERAERATAGGEDAARPLGTRTIVLKFVITKLDAMVGSRVSVSGLLIGEGGVDGINVTTVNRVAQKCP*
Ga0150983_1100692123300011120Forest SoilAPAGEDATRPLGSRTIALKFVVTRLDALAGSRVAASGLLIGDGGVDGLNVTAVDRVAQKCP*
Ga0150983_1156645113300011120Forest SoilPAKIGADWVITRATTPERAETVTPGVNDATRPLGNRMIALKFVVTRLDQLYGSRVAVTGLLIGAGGVDGINVTTVTRVAPKCP*
Ga0150983_1218806823300011120Forest SoilSGEDDATRPLGNRTIPLKFVVTRLDPLTGSRVAVSGLLIGPDGADGINVTAVTRVAEKCP
Ga0126369_1008951753300012971Tropical Forest SoilCLARSGEEWVVTNATTPERAERVPPSGEDATRPLGSRTMPLKFVVTRLDPLAGARVVVSGLLIGDGGADGINVTTVNRVAQKCP*
Ga0157370_1093907633300013104Corn RhizosphereGCLVKSGPDWVVTNATTPERAERAASGQEDSIRSLGSRKIALKFVVTKLDGLAGSRVAVNGLLIGEGGVDGINVTTVNRVAPKCP*
Ga0157378_1135871023300013297Miscanthus RhizosphereVVGCLDRSGQDWVVTNATVPERAELVAPVGEDATRPLGSRRMVLKVVLTKLDSFAGSRVAVNGLLIGPGGADGINVMAVNRVAPKCP*
Ga0181528_1082935823300014167BogCLARSGADWVVTRATTPERAEHAPGEDDATRPLGNRTIPLKFVVTRLDAFAGSRVTVNGLLIGADGTDGINVTTVNRVAQKCP*
Ga0181531_1084208023300014169BogAKSGDGWVVTRATTPERAESIAAGADATRPLGNRTIPLKFVVTRLDPLSGSRVAVNGLLIGDGGADGINVTAVKRVAEKCP*
Ga0181531_1090154823300014169BogGEDATRPLGSRTMPLKFVVTKLDALAGSRVAVSGLLIGAGGVDGINVTTVNRVAQKCP*
Ga0181526_1093449423300014200BogAPGGEDATRPLGSRTMPLKFVVTRLDSLAGSRVAVSGLLIGAGGVDGINVTAVNLVAPKCP*
Ga0163163_1171899623300014325Switchgrass RhizosphereVTSATIPERAERAASGAEDATRALGTRTVPLKFVITRLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP*
Ga0137414_121493883300015051Vadose Zone SoilVTNATTPERAERIATSAEDAARPLGNRKIELKFVISKLDALIGSRVAVNGLLMGTDGVDGINVTAVNRVAPKCP*
Ga0132257_10046095523300015373Arabidopsis RhizosphereTNATTPERAERAGPDGAEATRSLGNRRMVLKFVVTKLDALAGSRVAVSGLLIGADGVDGINVTTVNRIAPKCP*
Ga0182039_1122067313300016422SoilGSDWVVTNATTPERAERVAPAGEDATRSLGSRTMPLKFVVTRLDPMAGSRVAVSGLLIGPGGADGINVTTVNRVGQKCP
Ga0181505_1081733223300016750PeatlandGCLARSGAGWVVTNATTPERAERVAPGGEDATRPLGNRTMPLKFVVTHLDALAGSRVAVSGLLIGAGGVDGINVTTVNRVAQKCP
Ga0187801_1021435613300017933Freshwater SedimentPDWVVTNATTPERAERVAPGVDDATRPLGGRTIPLKFVVTHLDALAGSRVVVNGLLIGAGGVDGINVTTVNRVAPKCP
Ga0187808_1003097333300017942Freshwater SedimentVVMRATPPERAESASGTEDPTRPLGSRTIALKFVVTNLFPLAGSRVAVTGLLICAGGVDGINVTEVNRVAEKCR
Ga0181520_1025309923300017988BogVTRATIPERAEHAPGGDDATRPLGNRTIPLKFVVTRLDALAGSRVTVSGLLIGANGVDGINVTTVTRVAQHCP
Ga0187804_1007424313300018006Freshwater SedimentTPPERAESASGTEDPTRPLGSRTIAIKFVVTNLFPLAGSRVAVTGLLIGAGGVDGINVTEVNRVAEKCR
Ga0187771_1018091133300018088Tropical PeatlandCLARSGGDWVVTKATTPERAESAAQGEDATKPLGSRTIPLKFVVTRLDPLAGSRVAVTGLLIGAGGVDGINVTTVTRVAEKCP
Ga0181510_109335513300019240PeatlandWVVTKATRPERAENTGEQDATKPLGTRTMALKYVVTRLDALAGSRVAVSGLLIGDDGADGINVTSVNRVAQKCP
Ga0181502_115919833300019242PeatlandVTRATTPERAEHAPGEDDATRPLGTRTIPLKFVVTRLDALAGSRVTVSGLLIGADGTDGINVTTVNRVAQKCP
Ga0181508_106595913300019256PeatlandGEDDATRPLGNRTIPLKFVVTRLDAFAGSRVTVNGLLIGADGTDGINVTTVNRVAQKCP
Ga0206352_1054983833300020078Corn, Switchgrass And Miscanthus RhizosphereVMNATTPERAERVVQAGEDAARPLGRRTIPLKFVVTRLDAMAGARVAVSGLLIGAGGTDGLNVTAVNRVAEKCP
Ga0210399_1094576623300020581SoilERAERVTPGGDDATRLLGSRTMALKFVVTKLDAFAGSRVAVTGLLIGADGMDGINVTEVSRVAPKCP
Ga0210401_1013906933300020583SoilANALARVIGCLARSGADWVVTSATTPERAERVTPGGDDATRLLGSRTMALKFVVTKLDAFAGSRVAVTGLLIGADGMDGINVTEVSRVAPKCP
Ga0210401_1030026123300020583SoilRATTPERAERAAPDGEEATRPLGSRTIALKFVVTRLDALAGSRVAVSGLLMGADGVDGINVTAVNRVAEKCL
Ga0210388_1018094663300021181SoilSGADWVVTSATTPERAERTAAGGDDATRPLGGRTMPLKFVVTRLDGLAGSRVAVSGLLIGAGGVDGINVTTVNRVAQKCP
Ga0210388_1088620023300021181SoilSGADWVVTSATTPERAERAAPGGDDATRPLGSRTMPLKFVVTRLDALVGSRVAVSGLLIGAGGVDGINVTTVNRVAQKCP
Ga0213876_1048341023300021384Plant RootsRAQRGPDWVVTSATPPERAEHAAGEEASRALGNRVMTLKFVITRLDAMVGSRVAVNGLLIGEGGMEGINVTTVHRVAPKCP
Ga0210393_1057476813300021401SoilENAASAGADATRPLGNRTMTLKFVVTHLDPLSGSRVVVTGLLIGAGGADGINVTTVNRVAGKCP
Ga0210385_1029328313300021402SoilRAERTPGGDDATKPLGNRTIPLKFVVTRLDPLAGSRVVVSGLLIGANGVDGINVTAVTRVAEKCP
Ga0210394_1075096013300021420SoilAPGGDDATRPLGSRTMPLKFVVTRLDSLAGSRVAVSGLLIGAGGADGINVTTVNRVAQKC
Ga0210394_1100987813300021420SoilTKNGADWVVTSATTPERAERAAPGDADARRSLGSRTIALKFVVTKLDAFVGSRVAVSGLLIGEGGVDGINVTTVNRVAQKCP
Ga0210409_1118517723300021559SoilRAVAGEEDATRPLGSRTMGLKFVVTKLDALAGSRVAVSGLLIGEGGVDGINVTAVNRVAQKCP
Ga0242648_102974823300022506SoilSGGNDATRPLGSRTLALKFVITRLDNLAGSRVAVTGLLIGPGGADGINVTTMSRVGSAGENACFTNR
Ga0242659_109185023300022522SoilAKSGSDWVVTKATPPERAERASSAGNDATRPLGSRTMPLKFVVTRLDPLAGSRVAVSGLLIGTGGADGINVTTVTRVAPKCP
Ga0242659_114039013300022522SoilRAESVAAGADATRPLGNRTIPLKFVVTRLDPLSGSRVAVNGLLIGDGGAEGINVTAVKRVADRCP
Ga0242655_1003772123300022532SoilATRPERAERAAQGGEDAIRPLGSRTMTLKYVITHLDALAGSRVAVSGLLIGDDGADGINVTAVNRVAQKCP
Ga0242655_1017199113300022532SoilESLALGGGEASKPLGNRTTALKFVVMKLDALAGSRVAVTGLLIGAGGVDGINVMAVNRVAPKCP
Ga0242662_1019147313300022533SoilTTPERAERVTPGGDDATRLLGSRTMALKFVVTKLDAFAGSRVAVTGLLIGADGMDGINVTEVSRVAPKCP
Ga0242670_107306223300022708SoilTELPANALVRLVGCLARKGADWVVTNATAPERAERSGGNDATRPLGSRTLALKFVITRLDSLAGSRVVVTGLLIGPGGADGINVTTVSRVGSAGENACFTNR
Ga0242657_110377123300022722SoilVGCLARSGADWVVTRATAPERAENAVGRDDATRPLGSRTIQLKFVVTRLDPLAGSRVVVSGLLIGAGGADGVNVTTVNRVAEKCP
Ga0242657_123640513300022722SoilTIPERAENVAPGAADATKPLGNRTIPLKFVVTHLDALAGSRVAVTGLLIGDGGADGINVTTVNRVAQKCP
Ga0242657_125364013300022722SoilTDWVVTRSTTPERAEHPSGEDDATRPLGSRTIPLKFVVTRLDPLTGSRVAVSGLLIGPDGADGINVTAVTRVAEKCP
Ga0207656_1003889013300025321Corn RhizosphereWVVTNATTPERAERSAAGAEDAARPLGSRKIALKFVVTKLDGLAGSRVAVSGLLIGEGGMDGINVTAVNRIAPKCP
Ga0207656_1038950413300025321Corn RhizosphereEREASSGEDATRPLGSRTVPLKFVITRLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP
Ga0207645_1008222533300025907Miscanthus RhizosphereAASSGEDATRPLGSRTVPLKFVITRLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP
Ga0207663_1062831113300025916Corn, Switchgrass And Miscanthus RhizosphereRSGADWAVTNATTPERAERAEHAGGEDATRPLGSRKMALKFVVTKLDGLAGTRVAVSGLLIGEGGVDGINVTTVNRVAPKCP
Ga0207662_1096039623300025918Switchgrass RhizosphereMDMGEIQTLDMAGDDAARPLGSRTIALKFVITRLDALAGSRVAVSGLLIGEGGVDGINVTTVDRVAPRCP
Ga0207649_1033937223300025920Corn RhizosphereTAPERAERAVSASDDATRPLGSRTMALKFVVTKLDALAGSRVAVSGLLIGEGGVDGINVTTVTRVAPKCP
Ga0207652_1075897913300025921Corn RhizosphereGCLTKNGADWVVTSATTPERAEREASSGEDATRPLGSRTVPLKFVITRLDALAGSRVAVSGLLIGEGGVDGINVTTVNRVAPKCP
Ga0207704_1035786123300025938Miscanthus RhizosphereTGEDAARPLGNRTIALKFVITRLDALTGSRVAVSGLLMGEGGVDGINVTTVNRVAQKCP
Ga0209008_107224013300027545Forest SoilITKATTPERAENVAPGGADATRPLGNRTMTLKFVVTRLDPLAGSRVAVSGLLIGAGGADGINVTTVTRVAEKCP
Ga0209275_1081302223300027884SoilPERAERAPGGDATKPLGNRTIPLKFVVTRLDPLAGSRVAVSGLLIGADGADGINVTTVSRVAEKCP
Ga0311340_1109639413300029943PalsaVTRATTPERAESIAAGADATRPLGNRTIPLKFVVTRLDPLSGSRVAVNGLLIGDGGADGINVTAVKRVAEKCP
Ga0311338_1114655023300030007PalsaWVVTRATTPERAERAAPSGEDATRPLGNRTIPLKFVVTRLDSMAGSRVTVSGLLIGDGGADGINVTAVNRVAEKCP
Ga0302177_1001926733300030053PalsaRSGSDWVVTSATNPERAERAAPAGEDATRPLGKRTMPLKFVVTRLDPLIGSRVAVSGILIGAGGADGINVTTVTRVAPKCP
Ga0302177_1037485323300030053PalsaPERAESIAAGADATRPLGNRTIPLKFVVTRLDPLSGSRVAVNGLLIGDGGADGINVTAVKRVAEKCP
Ga0302177_1065320923300030053PalsaTTPERAENAPRGDDSTRPLGNRTIPLKFVVTRLDPLAGSRIAVSGLLIGADGVDGINVTTVTRVAQSCP
Ga0311353_1162929313300030399PalsaSDGEQAARPLGSRTIPLKFVVTRLDALAGSRVAVSGLLIGADGADGINVTAVNRVAEKCP
Ga0302183_1043671723300030509PalsaRAENAPRGDDSTRPLGNRTIPLKFVVTRLDPLAGSRIAVSGLLIGADGVDGINVTTVTRIAQSCP
Ga0210257_1009616523300030549SoilRAEGVAAGADATRPLGNRTIPLKFVVTRLDPLSGSRVVVSGLLIGDGGVDGINVTTVKRVAEKCP
Ga0311356_1019088333300030617PalsaKDGRTQLPSNALARVLGCLARNGTDWVVTRATTPERAENAPRGDDSTRPLGNRTIPLKFVVTRLDPLAGSRIAVSGLLIGADGVDGINVTTVTRVAQSCP
Ga0302307_1046693413300031233PalsaVTRATTPERAENAPRGDDSTRPLGNRTIPLKFVVTRLDPLAGSRVVVSGLLIGADGVDGINVTAVTRVAQSCP
Ga0170818_11012628723300031474Forest SoilVVTSATTPERAERAAQGGEDATRPLGSRTIALKFVVTKLDGLVGSRVAVSGLLIGEGGVDGINVTTVSRVAPKCP
Ga0302326_1052441633300031525PalsaDWVVTRATTPERAERAAPSGEDATRPLGNRTIPLKFVVTRLDSMAGSRVTVSGLLIGDGGADGINVTAVNRVAEKCP
Ga0318561_1015844623300031679SoilAERVAPSGEDATRPLGSRTMALKFVVTKLDSLAGSRVAVSGLLIGAGGVDGINVTTVNRLADKCP
Ga0310686_11622402623300031708SoilPANALARVVGCLARSEADLKKSGADWVVTSATTPERAERAAAGGEDATRPLGSRTMPLKFVVTRLDALAGSRVVVSGLLIGAGGVDGINVTTVNRVAQKCP
Ga0310813_1182643823300031716SoilTNATAPERAERAVPVEEDASRPLGRRTTPLKFVVTKLDPLAGSRVVVSGLLIGADGAEGINVTTVSRVAAKCP
Ga0306917_1127471513300031719SoilAERAAPADGDATRSLGSRTIPLKFVITKLDAFAGSRVAVSGLLIGADGVDGINVTAVNRVAPKCP
Ga0306919_1034594713300031879SoilARSGSDWVVTNATTPERAERVAPAGEDATRSLGSRTMPLKFVVTRLDPMAGSRVAVSGLLIGPGGADGINVTTVNRVGQKCP
Ga0316035_11360023300031955SoilAEHAGGDDATRPLGKSTIPLKFVVTRLDPLAGSRVAVSGLLIGANGVDGINVTTVNRVAEKCP
Ga0318559_1023359113300032039SoilVVTSATTPERAERAAPSGEDATTPLGSRTMALKFVVTKLDSLAGSRVAVSGLLIGAGGVDGINVTTVNRLADKCP
Ga0335081_1140593913300032892SoilSDWVVTNATTPERAEGAAPGEDNATRPLGSRTIPLKFVVTRLDALAGSRVVVSGLLIGAGGTDGINVTTVSRVAQKCP
Ga0335077_1012477033300033158SoilATTPERAEGAAPGEDNATRPLGSRTIPLKFVVTRLDALAGSRVVVSGLLIGAGGTDGINVTTVSRVAQKCP
Ga0335077_1179925023300033158SoilERAERIAPAGEDAARPLGSRKMALKFVVTRLDSMVGSRIAVTGLLIGADGVDGINVTTVSRVAPKCP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.