Metagenome / Metatranscriptome Family F100520

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F100520
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	99 residues
Representative Sequence	MTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.41 %
% of genes near scaffold ends (potentially truncated)	27.45 %
% of genes from short scaffolds (< 2000 bps)	69.61 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.902 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.980 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.10% β-sheet: 11.90% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08401	ArdcN	5.88
PF01555	N6_N4_Mtase	3.92
PF03707	MHYT	1.96
PF12844	HTH_19	1.96
PF00326	Peptidase_S9	1.96
PF01844	HNH	0.98
PF16864	Dimerisation2	0.98
PF13537	GATase_7	0.98
PF08447	PAS_3	0.98
PF13471	Transglut_core3	0.98
PF00437	T2SSE	0.98
PF02897	Peptidase_S9_N	0.98
PF02321	OEP	0.98
PF00593	TonB_dep_Rec	0.98
PF13560	HTH_31	0.98
PF01381	HTH_3	0.98
PF13289	SIR2_2	0.98
PF13414	TPR_11	0.98
PF05014	Nuc_deoxyrib_tr	0.98
PF00436	SSB	0.98
PF10091	Glycoamylase	0.98
PF02195	ParBc	0.98
PF03475	3-alpha	0.98
PF07992	Pyr_redox_2	0.98
PF13776	DUF4172	0.98
PF00873	ACR_tran	0.98
PF03743	TrbI	0.98
PF00891	Methyltransf_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	5.88
COG0863	DNA modification methylase	Replication, recombination and repair [L]	3.92
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	3.92
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	3.92
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.96
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	1.96
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.96
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.98
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.98
COG1770	Protease II	Amino acid transport and metabolism [E]	0.98
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.98
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.98
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.98
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.82 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.98 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.82 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.98 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.82 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.98 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.98 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.82 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.98 %
Steroidobacter agariperforans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agariperforans	0.98 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.98 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.82 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.98 %
Steroidobacter agariperforans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agariperforans	0.98 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.98 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000159	All Organisms → cellular organisms → Bacteria	50532	Open in IMG/M
3300001356\|JGI12269J14319_10107533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1341	Open in IMG/M
3300004476\|Ga0068966_1186526	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300005537\|Ga0070730_10032442	All Organisms → cellular organisms → Bacteria → Acidobacteria	3929	Open in IMG/M
3300005537\|Ga0070730_10055502	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300005610\|Ga0070763_10429069	Not Available	747	Open in IMG/M
3300006893\|Ga0073928_10009970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11444	Open in IMG/M
3300009518\|Ga0116128_1000129	All Organisms → cellular organisms → Bacteria	54634	Open in IMG/M
3300009518\|Ga0116128_1000242	All Organisms → cellular organisms → Bacteria → Acidobacteria	34564	Open in IMG/M
3300009520\|Ga0116214_1442628	Not Available	508	Open in IMG/M
3300009764\|Ga0116134_1310047	Not Available	542	Open in IMG/M
3300010339\|Ga0074046_10099406	Not Available	1879	Open in IMG/M
3300010339\|Ga0074046_10810639	Not Available	547	Open in IMG/M
3300010341\|Ga0074045_10077955	Not Available	2325	Open in IMG/M
3300010341\|Ga0074045_10114779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1852	Open in IMG/M
3300010341\|Ga0074045_10759888	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300010341\|Ga0074045_10851809	Not Available	576	Open in IMG/M
3300010343\|Ga0074044_10145758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300010343\|Ga0074044_11069255	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300010379\|Ga0136449_100348173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2664	Open in IMG/M
3300010379\|Ga0136449_103125404	Not Available	642	Open in IMG/M
3300010379\|Ga0136449_103768305	Not Available	571	Open in IMG/M
3300011120\|Ga0150983_12375213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300011269\|Ga0137392_11385816	Not Available	562	Open in IMG/M
3300011270\|Ga0137391_10344823	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300012202\|Ga0137363_11424131	Not Available	583	Open in IMG/M
3300012361\|Ga0137360_11606766	Not Available	555	Open in IMG/M
3300012582\|Ga0137358_10907530	Not Available	577	Open in IMG/M
3300014151\|Ga0181539_1006620	All Organisms → cellular organisms → Bacteria	8857	Open in IMG/M
3300014151\|Ga0181539_1040580	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300014153\|Ga0181527_1017049	All Organisms → cellular organisms → Bacteria → Proteobacteria	4850	Open in IMG/M
3300014153\|Ga0181527_1299996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	634	Open in IMG/M
3300014155\|Ga0181524_10072080	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300017823\|Ga0187818_10214564	Not Available	840	Open in IMG/M
3300017925\|Ga0187856_1000221	All Organisms → cellular organisms → Bacteria	54514	Open in IMG/M
3300017925\|Ga0187856_1000526	All Organisms → cellular organisms → Bacteria → Acidobacteria	34564	Open in IMG/M
3300017933\|Ga0187801_10039643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300017933\|Ga0187801_10471246	Not Available	529	Open in IMG/M
3300017934\|Ga0187803_10269939	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300017955\|Ga0187817_10319384	Not Available	990	Open in IMG/M
3300017972\|Ga0187781_10992295	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300017998\|Ga0187870_1173048	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300018018\|Ga0187886_1213212	Not Available	740	Open in IMG/M
3300018018\|Ga0187886_1299393	Not Available	600	Open in IMG/M
3300018062\|Ga0187784_10572144	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300018088\|Ga0187771_10350785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300020579\|Ga0210407_10411392	Not Available	1058	Open in IMG/M
3300020579\|Ga0210407_10572173	Not Available	881	Open in IMG/M
3300020580\|Ga0210403_10090246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2478	Open in IMG/M
3300020583\|Ga0210401_10001289	All Organisms → cellular organisms → Bacteria	29273	Open in IMG/M
3300020583\|Ga0210401_10005636	All Organisms → cellular organisms → Bacteria	12864	Open in IMG/M
3300020583\|Ga0210401_11153731	Not Available	633	Open in IMG/M
3300021046\|Ga0215015_11016367	Not Available	1328	Open in IMG/M
3300021168\|Ga0210406_10813399	Not Available	710	Open in IMG/M
3300021170\|Ga0210400_10000779	All Organisms → cellular organisms → Bacteria	33607	Open in IMG/M
3300021171\|Ga0210405_10523708	Not Available	928	Open in IMG/M
3300021180\|Ga0210396_11256630	Not Available	618	Open in IMG/M
3300021401\|Ga0210393_10039951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3682	Open in IMG/M
3300021404\|Ga0210389_10623499	Not Available	847	Open in IMG/M
3300021406\|Ga0210386_11159933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300021420\|Ga0210394_10000035	All Organisms → cellular organisms → Bacteria	313403	Open in IMG/M
3300021420\|Ga0210394_10000674	All Organisms → cellular organisms → Bacteria	65627	Open in IMG/M
3300021432\|Ga0210384_10318878	Not Available	1400	Open in IMG/M
3300021475\|Ga0210392_11362173	Not Available	531	Open in IMG/M
3300021477\|Ga0210398_10036531	All Organisms → cellular organisms → Bacteria	4088	Open in IMG/M
3300021479\|Ga0210410_10121973	Not Available	2311	Open in IMG/M
3300021479\|Ga0210410_10878204	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300021559\|Ga0210409_10390474	Not Available	1246	Open in IMG/M
3300021559\|Ga0210409_10924049	Not Available	746	Open in IMG/M
3300022532\|Ga0242655_10090397	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300022557\|Ga0212123_10000882	All Organisms → cellular organisms → Bacteria	90483	Open in IMG/M
3300022557\|Ga0212123_10037817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4737	Open in IMG/M
3300025320\|Ga0209171_10024346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4628	Open in IMG/M
3300025454\|Ga0208039_1028586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300025472\|Ga0208692_1037709	Not Available	1233	Open in IMG/M
3300026319\|Ga0209647_1026715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agariperforans	3457	Open in IMG/M
3300027604\|Ga0208324_1057207	Not Available	1127	Open in IMG/M
3300027857\|Ga0209166_10044830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	2611	Open in IMG/M
3300027857\|Ga0209166_10397540	Not Available	716	Open in IMG/M
3300030707\|Ga0310038_10382679	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300030848\|Ga0075388_10929191	Not Available	502	Open in IMG/M
3300030854\|Ga0075385_11452496	Not Available	634	Open in IMG/M
3300031057\|Ga0170834_100485111	Not Available	563	Open in IMG/M
3300031231\|Ga0170824_100134223	Not Available	1227	Open in IMG/M
3300031231\|Ga0170824_122895432	Not Available	779	Open in IMG/M
3300032160\|Ga0311301_12142896	Not Available	645	Open in IMG/M
3300032180\|Ga0307471_100410571	Not Available	1484	Open in IMG/M
3300032770\|Ga0335085_10000616	All Organisms → cellular organisms → Bacteria	95524	Open in IMG/M
3300032770\|Ga0335085_10678497	Not Available	1149	Open in IMG/M
3300032892\|Ga0335081_10934252	Not Available	1018	Open in IMG/M
3300032893\|Ga0335069_10542959	Not Available	1342	Open in IMG/M
3300032897\|Ga0335071_10810997	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300032898\|Ga0335072_10405872	Not Available	1460	Open in IMG/M
3300032898\|Ga0335072_10544544	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300032898\|Ga0335072_11070677	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300032898\|Ga0335072_11746583	Not Available	516	Open in IMG/M
3300032955\|Ga0335076_10698659	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300033402\|Ga0326728_10000826	All Organisms → cellular organisms → Bacteria	116613	Open in IMG/M
3300033402\|Ga0326728_10001621	All Organisms → cellular organisms → Bacteria	78800	Open in IMG/M
3300033402\|Ga0326728_10302623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300033405\|Ga0326727_10833740	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300033982\|Ga0371487_0137586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.47%
Aquatic	Environmental → Aquatic	23.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.57%
Freshwater	Environmental → Aquatic → Freshwater	19.61%
Peat	Environmental → Terrestrial → Peat	4.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.92%
Loam	Environmental → Terrestrial → Soil → Loam	1.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	20.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	7.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.90%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000015933	3300000567	Peatlands Soil	VTTPEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH*
JGI12269J14319_101075331	3300001356	Peatlands Soil	PEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH*
Ga0068966_11865261	3300004476	Peatlands Soil	KPVTTPEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH*
Ga0070730_100324423	3300005537	Surface Soil	MTAPDAKLEYRIEREGDKFVAVDSGEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRCSVRTIMAEFDVDMGTALNWVNAGAGITALGVEEGDEEANR*
Ga0070730_100555022	3300005537	Surface Soil	MTAPEAKLEYRVERDGDKFAAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRNSVRTVMAEFDVDMETALNWVNADAGITALGMEEGDEEPKH*
Ga0070763_104290692	3300005610	Soil	LTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKREDAIWERTKELMRDSVRTIMAEFDVDMEAALGQVNAAAGMTALGMEEGDEEPKH*
Ga0073928_100099708	3300006893	Iron-Sulfur Acid Spring	MTAPGAKLEYRIEREGDKFIAIDSEQDTVGVYATETQAQADIERAKKEDAIWERSKELMRNAVRTIMAEFDVDLETALGWVNSASGMTALAMDDEPRR*
Ga0116128_100012917	3300009518	Peatland	VTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH*
Ga0116128_100024233	3300009518	Peatland	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDLDMETALNWVNAGAGITVLGMVEGDGEAKH*
Ga0116214_14426281	3300009520	Peatlands Soil	WGFLASSLGKSPSLLVFSWREGKPVTTPEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH*
Ga0116134_13100471	3300009764	Peatland	MTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH*
Ga0074046_100994062	3300010339	Bog Forest Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIAREKKEDAMWDRTKELMRHAVRTIMAEFSVDVETALNYVNSAAGMTVLGREEEPDR*
Ga0074046_108106391	3300010339	Bog Forest Soil	LVFSRREGKPRATPEAKLEYLIEREGDKFVAIDSDQETVGVYDTEEQAQADIAREKRDDAIWERTKELMRNTVVTIMTEFSLDLETALFWVN
Ga0074045_100779553	3300010341	Bog Forest Soil	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMHDKPKH*
Ga0074045_101147791	3300010341	Bog Forest Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELTRHSVRTIMVEFDVDMETALNWVNAGAGITVLGMEEGDEEPNH*
Ga0074045_107598881	3300010341	Bog Forest Soil	SRCLLVFSRREGEPMTSPEAKPEYRIERDGDKFVAIAPDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTPLAMHDESKR*
Ga0074045_108518091	3300010341	Bog Forest Soil	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALANIAREKREDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTPLAMHDESKR*
Ga0074044_101457582	3300010343	Bog Forest Soil	MTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKRDDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTPLAMHDESKR*
Ga0074044_110692551	3300010343	Bog Forest Soil	PEAKLEYRIERDGDKFVAIDSDKETVGVYDTEEQAQADIAREKRDDARWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDEEPKH*
Ga0136449_1003481732	3300010379	Peatlands Soil	MTTPEAKLEYQIERNGDKFVAIDSEQETVGVYDTEEEAQADIERAKKEDAIWERSKELMRSAVLTIMVEFAVDQETALNWVGSASGMTSLAMDDEPKR*
Ga0136449_1031254041	3300010379	Peatlands Soil	VKTPEAKLEYRIEQDGDKFIAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH*
Ga0136449_1037683052	3300010379	Peatlands Soil	EAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELTRHSVRTIMAEFSVDMETALGYVNSAAGITVLGMEEGDEEPKH*
Ga0150983_123752131	3300011120	Forest Soil	PMTAPEAKLEYRVERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKQLMRHSVRTIMAEFDVDMETALTWVNAAAGITVLGMEEGDEEPKH*
Ga0137392_113858161	3300011269	Vadose Zone Soil	MTAAEAKLEYSIERDGEKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITVLG
Ga0137391_103448232	3300011270	Vadose Zone Soil	MTAAEAKLEYRIERDGEKFVAIDSDEETVGVFDTEGEAQTDITRAKIEDAIWERTKELMRQSVRTIMAEFDVDMDTALNWVNAGAGITVLGMEEEDEGPRH*
Ga0137363_114241312	3300012202	Vadose Zone Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITARGMEEGDEEPKH*
Ga0137360_116067661	3300012361	Vadose Zone Soil	EYRIERDGDKFVAIDSDEETVGVFDTEGEAQWDVARAKKEDAIWERTKELMRHSVRTIMAEFEVDMETALNWVNAGAGITALGMEEGDEEANR*
Ga0137358_109075301	3300012582	Vadose Zone Soil	MTAPEAKLEYRVERDGDKFVALDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRAIMAEFEVDMETALNWVNAGAGITALGMEEGDEEPKH*
Ga0181539_10066202	3300014151	Bog	VTTPGAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKRDDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH*
Ga0181539_10405802	3300014151	Bog	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNNVVTLMTEFSVDLETALFWVNSASGMTVLAMDDKPKH*
Ga0181527_10170496	3300014153	Bog	VTTPEAKLQYRIERDGDKFVAIASDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTVLAMDDKPKH*
Ga0181527_12999962	3300014153	Bog	MTTPEAKLEYRIERDGDKFVAIDSDEETVGVYDSEEEAQADIAREKKEDAIWDRTKELMRHAVRTIMGEFSVDVETALNYVNSAAGMTVLGMEEDPDR*
Ga0181524_100720803	3300014155	Bog	MTTPEAKLEYRIERDGDKFVAIDSDDETVGVYDSEEEAQADIAREKKEDAIWDRTKELMRHAVRTSMEEFSVDVETALNYVNSAAGMTVLGMEEDPYR*
Ga0187818_102145641	3300017823	Freshwater Sediment	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNNVVTLMTEFSVDLETALFWVNSASGMTV
Ga0187856_100022117	3300017925	Peatland	VTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH
Ga0187856_100052633	3300017925	Peatland	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDLDMETALNWVNAGAGITVLGMVEGDGEAKH
Ga0187801_100396432	3300017933	Freshwater Sediment	VTTPEAKLQYRIERDGDKFVAVAPDQETVGVYDTEEHALADIAREKREDAIWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDDPDH
Ga0187801_104712461	3300017933	Freshwater Sediment	VKTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERAKELMRNTVITIMTEFSVDLETALFWVNSASGMTALAMDDKPKH
Ga0187803_102699392	3300017934	Freshwater Sediment	MTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKRDDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTPLAMHDESKR
Ga0187817_103193841	3300017955	Freshwater Sediment	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDDKPKH
Ga0187781_109922952	3300017972	Tropical Peatland	FLVLSWREGKPVTTPEPKLECRIKREGDKFVVIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDDPNH
Ga0187870_11730481	3300017998	Peatland	SLLVFSRREGKPVTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH
Ga0187886_12132121	3300018018	Peatland	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDLDMETALNWVNAGAGITVLGM
Ga0187886_12993931	3300018018	Peatland	VTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDEEPKH
Ga0187784_105721442	3300018062	Tropical Peatland	VTTPEPKLEYRIEREGDKFVAIASDQETVGVYDTEEQALADIAREKREDAVWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTELAMEDDPNH
Ga0187771_103507851	3300018088	Tropical Peatland	KQPHVRKLSRTPLSAMSSGFRASPLGKSPSLLVLSWREGKPVTTPEPKLEYRIKRNGDRFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVATIMTEFSLDLETALFWVNSASGMTELAMEDDPNH
Ga0210407_104113921	3300020579	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIIAEFDVDMETALNWVNAGAGITALGMEEGDEEP
Ga0210407_105721731	3300020579	Soil	MTAHEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVN
Ga0210403_100902462	3300020580	Soil	MAAPEAKLEYRIERDGDKFVAVDSDEETVGVFDTEGEAQADVARAKKEDAIWHRTKELMRHSVRTIMAEFEVDMETALNWVNAGAGITALGMEEGDEEPKH
Ga0210401_1000128920	3300020583	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAKADVARAKKEDAIWERTKELMRHSVRTIMAEFAVDVETALNWVNAGAGITVLGMEEGDEEAKH
Ga0210401_1000563613	3300020583	Soil	MTAPEAKLEYRIEREGDKFVAIDSDEETVGVFDTEGEAQADVARAKREDAIWERTKELMRHSVRTIMAEFDVDMETALTWVNAAAGITVLGMEEGDEEPKH
Ga0210401_111537311	3300020583	Soil	MTAPEAKLEYRIEREGDKFVAVDSGEETVGVFDTEGETQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMEAALGQVNAAAGMTALGMEEGDEEPKH
Ga0215015_110163672	3300021046	Soil	MTASEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTVMAEFEVDMETALHWVNAGAGITALGMEEGDE
Ga0210406_108133992	3300021168	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITVLGMEEGDEEPKH
Ga0210400_100007792	3300021170	Soil	MTAPDAKLEYRIEREGDKFVAVDSGEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITALGMEEGDEEPKN
Ga0210405_105237082	3300021171	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKREDAIWERTKELMRHSVRTIMAEFDVDMETALTWVNAAAGITVLGMEEGDEEPKH
Ga0210396_112566301	3300021180	Soil	MTAHEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIIAEFDVDMETALNWVNAGAG
Ga0210393_100399514	3300021401	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITALGMEEGDEEP
Ga0210389_106234992	3300021404	Soil	MTAPEAKLEYRVERDGDKFVALDSEEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITALGMEEGDEEP
Ga0210386_111599331	3300021406	Soil	EYRIEREGDKFVAIDSDEETVGVFDTEGEAQADVARAKREDAIWERTKELMRHSVRTIMAEFDVDMETALTWVNAAAGITVLGMEEGDEEPKH
Ga0210394_1000003569	3300021420	Soil	MTAPEAKLEYRIEREDGKFVAIDSDKETVGVYDSEEEAQAEIAREKKEDAMWDRTKNLMRTAVRTIMAEFSVDMETALAQVNSAAGMTVLGMEEGEDEPTR
Ga0210394_1000067460	3300021420	Soil	MTAPEAKLEYRIARDGDKFVAIDSDEETVGVFATEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALKCVNAGAGITVVGMEEGDEEPNR
Ga0210384_103188782	3300021432	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVEMETALNWVNAGAGITALGMEEGDEEP
Ga0210392_113621731	3300021475	Soil	MTAPEAKLEYRIERDGDKFVAIDSHEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITALGMEEGDEEPKH
Ga0210398_100365314	3300021477	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDSEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFEVDMETALNWVNAGAGITVLGMKEGDEEPKH
Ga0210410_101219732	3300021479	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDSEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMEAALGQVNAAAGMTALGMEEGDEEPKH
Ga0210410_108782042	3300021479	Soil	TAPEAKLEYRIERDGHKFVAIDSDEETVGVFDTEGQAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITALGMEEGDEEAKH
Ga0210409_103904742	3300021559	Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFAAEGEAQADIARAKKEDAMWERTKELMRHSVRTIMAEFDVDMETALNWVNAGAGITTLGMEEGDEEPRH
Ga0210409_109240491	3300021559	Soil	MTAHEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFDVDMEAALGQVNAAAGMTALGMEEGDEEPK
Ga0242655_100903971	3300022532	Soil	APEAKLEYRIERDGDKFVAIDSDEETVGVFDSEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFEVDMETALNWVNAGAGITVLGMKEGDEEPKH
Ga0212123_1000088270	3300022557	Iron-Sulfur Acid Spring	MTAPGAKLEYRIEREGDKFIAIDSEQDTVGVYATETQAQADIERAKKEDAIWERSKELMRNAVRTIMAEFDVDLETALGWVNSASGMTALAMDDEPRR
Ga0212123_100378175	3300022557	Iron-Sulfur Acid Spring	MTAPGAKLEYRIEREGDKFIAIDSEQDTVGVYTTETQAHADIERAKKEDAIWERSKELMRNAVRTIMAEFDVDLETALDWVNSASGMTALAMDDEPRR
Ga0209171_100243465	3300025320	Iron-Sulfur Acid Spring	MTAPGAKLEYRIEREGDKFIAIDSEQDTVGVYTTETQAHADIERAKKEDAIWERSKELMRNAVRTIMAEFDVDLETALDWVNSA
Ga0208039_10285861	3300025454	Peatland	KSPSLLVFSRREGKPVTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDEEPKH
Ga0208692_10377092	3300025472	Peatland	VTTPEAKLEYRIERDGDKFVAIDSDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTAL
Ga0209647_10267152	3300026319	Grasslands Soil	MTAPEAKLEYRIERDGDKFVAIDSDEESVGVFDTEGEAQADVARAKKEDAIWERTKELMRHSVRTIMAEFDVDMGTALNWVNAGAGITALGMEEGDEEANR
Ga0208324_10572072	3300027604	Peatlands Soil	VTTPEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH
Ga0209166_100448302	3300027857	Surface Soil	KFAAIDSDEETVGVFDTEGEAQADVARAKKEDAIWERTKELMRNSVRTVMAEFDVDMETALNWVNADAGITALGMEEGDEEPKH
Ga0209166_103975401	3300027857	Surface Soil	MTAPDAKLEYRIEREGDKFVAVDSGEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRCSVRTIMAEFDVDMGTALNWVNAGAGITALGVEEGDEEANR
Ga0310038_103826791	3300030707	Peatlands Soil	FSWREGKPVTTPEAKLEYRIERDGDKFVAIASDQETLGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTALAMDDKPKH
Ga0075388_109291911	3300030848	Soil	MTAPEANLEYRIERDGEKFVAIDSDEETVGVFVTEGEAQAEITRAKREDAMWARTKELMRHSIRTIMAEFDVDMETALNWVNAGAGITLLGMEEGNEEPKH
Ga0075385_114524961	3300030854	Soil	MMAPEVRLEYRIERDGDKFVAIDSDEDTVGVFDTEGEAQADIAREKKEDAIWARTKELMRATVRTIMTEFSVDMETALGHVNSAAGMRILGMEEGDEEPKH
Ga0170834_1004851111	3300031057	Forest Soil	MTAPEAKLEYRVERDGDKFVALDSDEETVGVFDTDGEAQADIVRAKKEDAIWERTKELMRHSVRTVMAEFEVDMETALNWVNAGAGITALGMEEGDEEPKR
Ga0170824_1001342232	3300031231	Forest Soil	PEAKLEYRIERDGDKFVAIDSDKETVGVFDTEGEAQAEIARAKKEDAIWERTKELMRHSVRTIMAEYEVDMETALNWVNAGAGITALGMEEGDEEPKH
Ga0170824_1228954321	3300031231	Forest Soil	MTAPEAKLEYRIEREGEKFVAIDSDEETVGLFDSEGEAQAEIAREKKEDAMWERTKELMRATARTIMTEFSVDMETALGHVNSAAGMTILGMEEGDEEPKH
Ga0311301_121428961	3300032160	Peatlands Soil	MTAPEAKLEYRIERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELTRHSVRTIMAEFSVDMETALGYVNSAAGITVLGMEEGDEEPKH
Ga0307471_1004105712	3300032180	Hardwood Forest Soil	MTAPEAKLEYRVERDGDKFVAIDSDEETVGVFDTEGEAQADIARAKKEDAIWERTKELMRHSVRTIMAEFELDMETALNWVNAGAGITALGMEEGDEEPKH
Ga0335085_1000061666	3300032770	Soil	MTTPEAKLEYRIERHGDKFVAIDSDEDTVGVFDSEEEAQAEIAREKREDAIWARTKELMRAAVRTIMTEFSVDMETALGHVNAAAGMTLLGMEEE
Ga0335085_106784972	3300032770	Soil	MTPEAKLEYRIERDGDKFVAIAPDQETVGVYDTEGQALADIAREKREDAIWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDNPNH
Ga0335081_109342521	3300032892	Soil	MTAPEAKLEYRIERDGNKFVAIDSDEDTVGVFDTEGEAQADIARAKKEDAMWERTKELMRHSVRTVMAEFDVDMETALNWVNAGAGITALGMEEGDEEANR
Ga0335069_105429591	3300032893	Soil	MTAPGAKLGYRIERDGDKFVAIDSDEETVGVFATEGEAQADIARAKKEDAMWERTKELMRHSVRTVMAEFDVDMETALNWVNAGAGITALGMEEGDEEAKH
Ga0335071_108109972	3300032897	Soil	VTTPEAKLEYRIERDGDKFVAIAPDQETVGVYDTEGQALADIAREKREDAIWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDNPNH
Ga0335072_104058722	3300032898	Soil	VTTPEAKLEYRIERDGDKFVAIAPDQETVGVYDTEGQALADIARERREDAIWERTKELMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDDPNH
Ga0335072_105445442	3300032898	Soil	VTTPDAKLEYRIERDGDKFVAIASDQETVGVYDTEEQALADIAREKREDAIWERTKELMRNTVVTLMTEFSVDLETALFWVNSASGMTPLAMHDKPKH
Ga0335072_110706772	3300032898	Soil	MKSDARLEYRIVRDHGKFVAIDSGEETVGVYDSEEEARADVARAKREAAMWERSKELLRGAVVTIMAEFGVDRETALYWVNAGSGMAALAMDDQPKHS
Ga0335072_117465831	3300032898	Soil	VTTPEAKLEYRIERDGGKFVAIAPDQETVGVYDTEGQALADIAREKREDAIWGRTKQLMRNTVVTLMTEFSLDLETALFWVNSASGMTALAMDDDPKH
Ga0335076_106986591	3300032955	Soil	VTTPEPKLAYRIERDGDKFVAIAPDQETVGVYDTEGQALADIAREKREDAIWERTKELMRNTVVTLMTEFSVDLETALFCVNSASGMTALAMDDDPSH
Ga0326728_1000082642	3300033402	Peat Soil	VTTPEAKLQYRIERDGDKFVAIASDQETVGVYDTEEQAQADIAREKREDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTVLAMDDKPKH
Ga0326728_1000162132	3300033402	Peat Soil	VTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQAQAEIAREKRDDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDDKPKH
Ga0326728_103026232	3300033402	Peat Soil	VTTPEANLEYRIERDGDKFVAIASDQETLGVYETEDQALADIAREKREDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDDKPKH
Ga0326727_108337402	3300033405	Peat Soil	MATPEGKLEYRIERDGNKFVAIDSDQETVGIYDTEEQAQADIAREKRDDAIWERTKELMRNTVVTIMTEFSVDLETALFWVNSASGMTVLAMDEEPKR
Ga0371487_0137586_496_870	3300033982	Peat Soil	MSVGIPCASLGKSPSLLVFSRREGKPVTTPEAKLEYRIERDGDKFVAIASDQETVGVYDTEEQAQAEIAREKRDDAIWERTKELMRNTVVTIMTEFSLDLETALFWVNSASGMTALAMDDKPKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100520

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences