Metagenome / Metatranscriptome Family F100508

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100508
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	105 residues
Representative Sequence	TFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.294 % of family members)
Environment Ontology (ENVO)	Unclassified (42.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.31% β-sheet: 14.14% Coil/Unstructured: 54.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00528	BPD_transp_1	31.37
PF00005	ABC_tran	6.86
PF09084	NMT1	0.98
PF00155	Aminotran_1_2	0.98
PF01494	FAD_binding_3	0.98
PF01042	Ribonuc_L-PSP	0.98
PF06684	AA_synth	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.96
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.98
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.98
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.98
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.98
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.98
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	85.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	83.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	83.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Nocardia carnea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia carnea	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10009435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2333	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1048520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300005175\|Ga0066673_10450929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300005332\|Ga0066388_103351442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300005332\|Ga0066388_106062773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300005332\|Ga0066388_106101374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300005363\|Ga0008090_15766788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300005434\|Ga0070709_11451121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300005536\|Ga0070697_100782134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300005559\|Ga0066700_10430458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300005713\|Ga0066905_101574227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005713\|Ga0066905_101574228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005921\|Ga0070766_10507420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300006032\|Ga0066696_10233996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1183	Open in IMG/M
3300006034\|Ga0066656_10076773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia carnea	1986	Open in IMG/M
3300006047\|Ga0075024_100085674	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300006050\|Ga0075028_100040928	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300006904\|Ga0075424_102140717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300006953\|Ga0074063_13736374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300009012\|Ga0066710_104754853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300010043\|Ga0126380_10106365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1698	Open in IMG/M
3300010048\|Ga0126373_11137583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300010358\|Ga0126370_10941489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	783	Open in IMG/M
3300010360\|Ga0126372_11638428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300010360\|Ga0126372_12306211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300010361\|Ga0126378_10551117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300010366\|Ga0126379_11433816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300010376\|Ga0126381_100736815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300011003\|Ga0138514_100014763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1331	Open in IMG/M
3300012361\|Ga0137360_11208952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300012948\|Ga0126375_10932876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300012957\|Ga0164303_11307588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300012971\|Ga0126369_10553071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1216	Open in IMG/M
3300012971\|Ga0126369_11371550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300012987\|Ga0164307_10223686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1297	Open in IMG/M
3300014150\|Ga0134081_10390445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300014495\|Ga0182015_10267454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300014654\|Ga0181525_10884449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300015372\|Ga0132256_100679488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1145	Open in IMG/M
3300016270\|Ga0182036_10021099	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300016270\|Ga0182036_10815243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300016294\|Ga0182041_10336551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300016294\|Ga0182041_10360999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300016319\|Ga0182033_12006381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300016371\|Ga0182034_10282431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1323	Open in IMG/M
3300016422\|Ga0182039_11418624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300016445\|Ga0182038_11695213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300018433\|Ga0066667_10121123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1788	Open in IMG/M
3300018433\|Ga0066667_11724555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300018468\|Ga0066662_10434628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300018482\|Ga0066669_10075401	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300020582\|Ga0210395_10342375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300021088\|Ga0210404_10061173	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300021170\|Ga0210400_10146231	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300021171\|Ga0210405_10255437	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300021403\|Ga0210397_10553092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300021432\|Ga0210384_10148046	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300021475\|Ga0210392_10868793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300025916\|Ga0207663_10680581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300027310\|Ga0207983_1043338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300027537\|Ga0209419_1050303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300027635\|Ga0209625_1086667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300027748\|Ga0209689_1350400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300027894\|Ga0209068_10226243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300027915\|Ga0209069_10125463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1257	Open in IMG/M
3300029910\|Ga0311369_10336202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300029999\|Ga0311339_10072993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4412	Open in IMG/M
3300031544\|Ga0318534_10818066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031564\|Ga0318573_10303426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300031573\|Ga0310915_10014636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4645	Open in IMG/M
3300031640\|Ga0318555_10734433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031668\|Ga0318542_10266233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300031719\|Ga0306917_11167968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300031724\|Ga0318500_10705700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031736\|Ga0318501_10178229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1104	Open in IMG/M
3300031744\|Ga0306918_10346502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300031771\|Ga0318546_11239659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031781\|Ga0318547_10622692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300031792\|Ga0318529_10035463	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300031793\|Ga0318548_10421491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300031794\|Ga0318503_10308806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031819\|Ga0318568_10142557	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300031833\|Ga0310917_10548576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300031835\|Ga0318517_10424451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031845\|Ga0318511_10583495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031890\|Ga0306925_11717813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031897\|Ga0318520_10605266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300031910\|Ga0306923_10273703	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300031941\|Ga0310912_10449967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300031942\|Ga0310916_10343847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1267	Open in IMG/M
3300031942\|Ga0310916_10857580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300031942\|Ga0310916_11550994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300031947\|Ga0310909_10292851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363	Open in IMG/M
3300031954\|Ga0306926_11552208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300031959\|Ga0318530_10373100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300032041\|Ga0318549_10247971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300032042\|Ga0318545_10067578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1227	Open in IMG/M
3300032054\|Ga0318570_10418128	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300032059\|Ga0318533_10502707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300032090\|Ga0318518_10190951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300032261\|Ga0306920_100414506	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300033289\|Ga0310914_10940929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.14%
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Sediment	Environmental → Aquatic → Sediment	3.92%
Peat	Environmental → Terrestrial → Peat	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.45%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100094351	3300000793	Forest Soil	DFLKDRKLAVTFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
AP72_2010_repI_A001DRAFT_10485201	3300000893	Forest Soil	NTDFLKDRKLAVTFLKAYVESMDFYGINPEKTVALVAQYTGGSPAVLDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0066673_104509291	3300005175	Soil	KAYVESMDFYGKNPEKTVALVAEYTGGSPAILDQAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0066388_1033514421	3300005332	Tropical Forest Soil	KNPEKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADHFDLSYLAEATGQSVEQLGSYGR*
Ga0066388_1060627731	3300005332	Tropical Forest Soil	RKLAVTFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQPVEQLGSYGR*
Ga0066388_1061013742	3300005332	Tropical Forest Soil	TFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVTDYFDLSYLAEATGQSVEQLSSYGR*
Ga0008090_157667881	3300005363	Tropical Rainforest Soil	FLKDRKLAVTFLKAYVESMDFYGINPEKTVALVAQYTGGSPAVLDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0070709_114511212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	YVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDILNAVNVAKQGPKFGFTRADASSKVPVYFDLSYLAEATGESVEQLGTYGR*
Ga0070697_1007821342	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKDRKLAVTFLKAYVESMDFYGKNPDQTVALAAQYTGGSPAILDEAMKHSRWTYRVNVPNAINVAKEGPKFGFTKANMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0066700_104304581	3300005559	Soil	FGAGNQLLAANTNFLKDRKLAVTFLKAYVESMDFYGKHPDKTVALVAQYTGGSPAILDEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0066905_1015742272	3300005713	Tropical Forest Soil	LKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAMNVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0066905_1015742282	3300005713	Tropical Forest Soil	LKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVTDYFDLSYLAEATGQSVEQLSSYGR*
Ga0070766_105074202	3300005921	Soil	ALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR*
Ga0066696_102339961	3300006032	Soil	NPEKTVALVAEYTGGRPAILDQAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0066656_100767731	3300006034	Soil	EFGAGNQLLAANTNFLKDRKLAVTFLKAYVESMDFYGKHPDKTVALVAQYTGGSPAILDEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0075024_1000856741	3300006047	Watersheds	KSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR*
Ga0075028_1000409283	3300006050	Watersheds	VIEGYGYYPECCDIGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSEAMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR*
Ga0075424_1021407171	3300006904	Populus Rhizosphere	YYPPCCDIGATKEFGAGNQLLAANADFLKDRKLAVTFLKAYVESMDFYAKHPDKTVALVAQYTGGSPAILDGAMKHSRWTYRVNVPNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0074063_137363741	3300006953	Soil	VEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVERLGTYGR*
Ga0066710_1047548532	3300009012	Grasslands Soil	YYSKNPDKTVALVAQYTGGSQPILSEAMAHSRWTYRVDIQNAVNVAKQGPKFGFTKADMSGKVPAYFDLSYLAEATGQSVEQLGTYGR
Ga0126380_101063653	3300010043	Tropical Forest Soil	YGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVTDYFDLSYLAEATGQSVEQLSSYGR*
Ga0126373_111375832	3300010048	Tropical Forest Soil	ESMDFYGKNPEKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0126370_109414892	3300010358	Tropical Forest Soil	SMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAMNVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0126372_116384282	3300010360	Tropical Forest Soil	LAVTFLKAYVESMDFYGKNPDKTVALVAEYTGGSAAILNEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVERLGSYGR*
Ga0126372_123062111	3300010360	Tropical Forest Soil	AYVESMDFYGKNPDKTVALVAQYTGGSPAILDQAMKHSRWTYRVNIQNAINVAKEGPKFGFTKADMSGKAAAYFDLSYLAEATGQSVEQLGSYGR*
Ga0126378_105511171	3300010361	Tropical Forest Soil	KLAVTFLKAYVESMDFYGKNPDKTVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0126379_114338162	3300010366	Tropical Forest Soil	TFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0126381_1007368153	3300010376	Tropical Forest Soil	VTFLKAYVESMDFYGKNPDKTVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0138514_1000147633	3300011003	Soil	VAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPGYFDLSYLAEATGESVEQLGTYGR*
Ga0137360_112089521	3300012361	Vadose Zone Soil	EFLKDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSQPILSEAMAHSRWTYRVDIQNAVNVAKQGPKFGFTKADMSGKVPAYFDLSYLAEATGQSVEQLGTYGR*
Ga0126375_109328762	3300012948	Tropical Forest Soil	VTFLKAYVDSMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSQWTFRVNIQNASNVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0164303_113075882	3300012957	Soil	LKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVAGYFDLSYLAEATGQSLEQLGSYGR*
Ga0126369_105530711	3300012971	Tropical Forest Soil	TFLKAYVEAMDFYAKNPDKTLALAAQYTGGSQPILEEAMKHSRWTFNVDIRNAINVARQGPKFGFTKADMSGKVADHFDLSYLAEATGQSVEQLGSYGR*
Ga0126369_113715502	3300012971	Tropical Forest Soil	FLKDRKLAVTFLKAYVDSMDFYGKNPDKTVALVAQYTGGSPATLDEAMKHSQWTFRVNIQNASNVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0164307_102236862	3300012987	Soil	ECCDIGDTKEFGAGNQLLAANAEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR*
Ga0134081_103904451	3300014150	Grasslands Soil	RLPVTFLKAYVESMDFYGKHPDKTVALVAQYTGGSPAILDEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR*
Ga0182015_102674541	3300014495	Palsa	VEAMNFYIKNPDKTVALVAQYTGGSQAILNEAMKHSQWDYRVDIQNAINVAKQGPKFGFTKADMSDKVASYFDLSYLAEATGKSVDQLSTYGR*
Ga0181525_108844492	3300014654	Bog	EAMGFYASNPDKTLALVAQYTGGSQPILNEAMKHSEWDYRADVLNATNIAKEGPKFGFTKADMSDKVASYFDLSYLAEATGKSVDQLSTYGR*
Ga0132256_1006794882	3300015372	Arabidopsis Rhizosphere	RKLAVTFLKAYVESMDFYRKNPEKTVALVAEYTGGSPAILDQAMKHSGWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR*
Ga0182036_100210991	3300016270	Soil	YYPACCDIGATQEFGAGNQLLAANTEFLNDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLGSYGR
Ga0182036_108152431	3300016270	Soil	DFLKDRKLAVTFLKAYVQSMDFYARNPDKTLALVAQYTGGSPAILNEAMKHSQWTDRVSIQNAVNVAREGPKFGFTKTDVSDKVRNYFDLGYLAEATGQPVEQLESYGR
Ga0182041_103365513	3300016294	Soil	YVESMDFYGKNPDKTVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0182041_103609992	3300016294	Soil	IGATRQFGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0182033_120063812	3300016319	Soil	VALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0182034_102824312	3300016371	Soil	LDRAVIDGYGYYPACCDIGATGEFGAGNQLLAASTDFLKDRKLAVTFVKAYVESMDFYARNAEKTLALVAQYTGGSPAILHEAMNHSQWTYRVSIGNAVNVAREGPKFGFTKTDVSDKVAGYFDLGYLAEATGQSVEQLGSYGR
Ga0182039_114186242	3300016422	Soil	ACCDIGATREFGAGNQLLAANTDFVRDRKLAVTVGKAYVESMDFYARNAEKTLALVAQYTGGSPAILHEAMNHSQWTYRVSIQNAVNVAREGPKFGFTKTDVSDKVAGYFDLGYLAEATGQSVEQLGSYGR
Ga0182038_116952132	3300016445	Soil	DFYARNPDKTLALVAQYTGGSPAILNEAMKHSQWTDRVSIQNAVNVAREGPKFGFTKTDVSDKVRDYFDLGYLAEATGQPVEQLESYGR
Ga0066667_101211231	3300018433	Grasslands Soil	VTFLKAYVESMDFYGKHPDKTVALVAQYTGGSPAILDEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLS
Ga0066667_117245551	3300018433	Grasslands Soil	AVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0066662_104346281	3300018468	Grasslands Soil	VIDRAVVEGYGYYAECCDIGDTKEFGAGNQLLAANAEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0066669_100754011	3300018482	Grasslands Soil	LLADRKRAVAFRRADAESLDPYGKRPDRPVARVAQDTRGSAAIVVEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYGR
Ga0210395_103423752	3300020582	Soil	LKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0210404_100611731	3300021088	Soil	WSPVIDRAVIEGYGYYPECCDIGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDILNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0210400_101462311	3300021170	Soil	LALVAQYTGGAPAVLSESMRHSGWTYRVDIRNAVNVAKQGPKFGFTRADASSKVPGYFDLSYLAEATGDSVEQLGTYGR
Ga0210405_102554373	3300021171	Soil	VNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0210397_105530921	3300021403	Soil	VEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIRNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0210384_101480463	3300021432	Soil	IGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0210392_108687931	3300021475	Soil	KTLALVAQYTGGAPAVLSEAMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPVYFDLSYLAEATGESVEQLGTYGR
Ga0207663_106805812	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	CCDIGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDILNAVNVAKQGPKFGFTRADASSKVPVYFDLSYLAEATGESVEQLGTYGR
Ga0207983_10433381	3300027310	Soil	VIDRAVIEGYGYYPECCDIGDTKEFGAGNQLLAANAEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLA
Ga0209419_10503032	3300027537	Forest Soil	WSPVIDRAVIEGYGYYPECCDIGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0209625_10866671	3300027635	Forest Soil	YPECCDIGDTKEFGAGNQLLAANTEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0209689_13504002	3300027748	Soil	VFAGNQLLAANTNFLKDRKLAVTFLKAYVESMDFYGKHPDKTVALVAQYTGGSPAILDEAMRHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLSSYG
Ga0209068_102262431	3300027894	Watersheds	TKEFGAGNQLLAANAEFLKDRKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0209069_101254633	3300027915	Watersheds	RKSAVNFLKAYVEAMDYYRKNPDKTLALVAQYTGGAPAVLSESMRHSGWTYRVDIQNAVNVAKQGPKFGFTRADASSKVPAYFDLSYLAEATGESVEQLGTYGR
Ga0311369_103362023	3300029910	Palsa	VALVTQYTGGSQPILDEAMKHTVWDYRVDISNAMNVTREGPKFGFTKTDMSDKVASYFDLSYLAEATGKSVDQLSTYGR
Ga0311339_100729931	3300029999	Palsa	NPNKTVALVTQYTGGSQPILDEAMKHTVWDYRVDISNAMNVTREGPKFGFTKTDMSDKVASYFDLSYLAEATGKSVDQLSTYGR
Ga0318534_108180661	3300031544	Soil	DKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0318573_103034262	3300031564	Soil	LAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0310915_100146366	3300031573	Soil	ANTEFLNDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLCSYGR
Ga0318555_107344331	3300031640	Soil	FGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYG
Ga0318542_102662332	3300031668	Soil	DKTVALVAQYTGGSPPILSEAMAHSRWTYRVDIQNAVNVAKEGPKFGFTRVDMSGKVPAYFDLSYLAEATGQSVEQLGTYGR
Ga0306917_111679682	3300031719	Soil	QLLAANTEFLKDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSPPILSEAMAHSRWTYRVDIQNAVNVAKEGPKFGFTRVDMSGKVPAYFDLSYLAEATGQSVEQLGTYGR
Ga0318500_107057001	3300031724	Soil	AYVESMDFYGKNPDKTVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318501_101782291	3300031736	Soil	SMDFYGKNPDKTVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0306918_103465021	3300031744	Soil	LVAQYTGGSSAILHEAMKHSQWTYRVSIQNAVNVAREGPKFGFTKTDVSDKVAGYFDLGYLAEATGQSVEQLGSYGR
Ga0318546_112396591	3300031771	Soil	DKTVALVAQYTGGSPAILDEAMKHSQWTYRVNIQNASNVAKEGPKFGFTKADMSSKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318547_106226922	3300031781	Soil	YSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0318529_100354633	3300031792	Soil	FLKAYVESMDFYGKNPDKTVALVAEYTGGSPATLDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318548_104214911	3300031793	Soil	QEFGAGNQLLAANTEFLNDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLCSYGR
Ga0318503_103088061	3300031794	Soil	TVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLGSYGR
Ga0318568_101425573	3300031819	Soil	VAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0310917_105485761	3300031833	Soil	VIEGYGYYPACCDIGATKEFGAGNQLLAANTEFLKDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSPPILSEAMAHSRWTYRVDIQNAVNVARQGPKFGFTKADMSGKVQAYFDLSYLAEATGQSVEQLGTYGR
Ga0318517_104244511	3300031835	Soil	VVDGYGYYPECCDIGATRQFGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0318511_105834951	3300031845	Soil	YGYYPACCDIGATQEFGAGNQLLAANTEFLNDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLGSYGR
Ga0306925_117178132	3300031890	Soil	LKAYVESMDFYGKNSDKTVALVAQYTGGSPPILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVTDYFDLSYLAEATGQSVEQLSSYGR
Ga0318520_106052662	3300031897	Soil	PACCDIGATKEFGAGNQLLAANTEFLKDRKLAVTFLKAYVEAMDYYGKNPDKTVALVAQYTGGSPPILSEAMAHSRWTYRVDIQNAVNVARQGPKFGFTKADMSSKVPAYFDLSYLAEATGQSVEQLGTYGR
Ga0306923_102737031	3300031910	Soil	DFLKDRKLAVTFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVANYFDLSYLAEATGQSVEQLSSYGR
Ga0310912_104499671	3300031941	Soil	ECCDIGATRQFGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0310916_103438471	3300031942	Soil	GDIDGFVLWSPTIDRAVVDGYGYYPECCDIGATRQFGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0310916_108575801	3300031942	Soil	LKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVANYFDLSYLAEATGQSVEQLSSYGR
Ga0310916_115509941	3300031942	Soil	YAGNPEKMLALVAQYTGGSPAILHEAMNHSQWTYRVSIGNAVNVAREGPKFGFTKTDVSDKVAGYFDLGYLAEATGQSVEQLGSYGR
Ga0310909_102928512	3300031947	Soil	DYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLCSYGR
Ga0306926_115522081	3300031954	Soil	YGKNPDKTVALVAQYTGGSPPILSEAMAHSRWTYRVDIQNAVNVARQGPKFGFTKADMSSKVPAYFDLSYLAEATGQSVEQLGTYGR
Ga0318530_103731001	3300031959	Soil	CCDIGATRQFGAGNQLLAANTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0318549_102479711	3300032041	Soil	VAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318545_100675783	3300032042	Soil	TVALVAEYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318570_104181281	3300032054	Soil	YTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVADYFDLSYLAEATGQSVEQLGSYGR
Ga0318533_105027072	3300032059	Soil	DYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR
Ga0318518_101909511	3300032090	Soil	GYGYYPACCDIGATQEFGAGNQLLAANTEFLNDRKLAVTFLKAYVEGMDYYSKNPDKTVALVAQYTGGSSPILAEAMAHSRWTYRVDIGNAVNVAKQGPKFGFTKVDMSGKVPGYFDLSYLAEATGQSIQQLCSYGR
Ga0306920_1004145061	3300032261	Soil	TFLKAYVESMDFYGKNPDKTVALVAQYTGGSPAILDEAMKHSRWTYRVNVQNAINVAKEGPKFGFTKADMSGKVANYFDLSYLAEATGQSVEQLSSYGR
Ga0310914_109409292	3300033289	Soil	NTEFLKDRKQTVTFLKAYVEAMDYYSRNPDKTVALVAQYTGGGAAILNEAMRHSRWTYRVDIQNAINVAKQGPKFGFTKADMSEKVPVYFDLSYLAEATGQPADQLSSYGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100508

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences