Metagenome Family F100456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100456
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	MGKTSSGRPRWIGIPARVFAMTFLLTLLSFAVALLLSILGTVVYSQVKH
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.51 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (10.784 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.65% β-sheet: 0.00% Coil/Unstructured: 49.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF05163	DinB	4.90
PF05016	ParE_toxin	2.94
PF00903	Glyoxalase	2.94
PF03544	TonB_C	2.94
PF09720	Unstab_antitox	2.94
PF04389	Peptidase_M28	1.96
PF01022	HTH_5	1.96
PF07732	Cu-oxidase_3	0.98
PF13365	Trypsin_2	0.98
PF02769	AIRS_C	0.98
PF04185	Phosphoesterase	0.98
PF08241	Methyltransf_11	0.98
PF12681	Glyoxalase_2	0.98
PF05988	DUF899	0.98
PF00464	SHMT	0.98
PF08327	AHSA1	0.98
PF12770	CHAT	0.98
PF07238	PilZ	0.98
PF05977	MFS_3	0.98
PF13847	Methyltransf_31	0.98
PF00106	adh_short	0.98
PF00989	PAS	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.90
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.94
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.98
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.98
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.98
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.98
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.98
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.45 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.75 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.75 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.75 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.88 %
Unclassified	root	N/A	2.94 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.92 %
Unclassified	root	N/A	2.94 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.92 %
Unclassified	root	N/A	2.94 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10330235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300001593\|JGI12635J15846_10048452	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300004152\|Ga0062386_101244159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300004635\|Ga0062388_100336623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1279	Open in IMG/M
3300005445\|Ga0070708_100627999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300005445\|Ga0070708_100658191	Not Available	987	Open in IMG/M
3300005468\|Ga0070707_100109768	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300005568\|Ga0066703_10237945	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005586\|Ga0066691_10227103	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005995\|Ga0066790_10113083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1165	Open in IMG/M
3300006059\|Ga0075017_100215047	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300006059\|Ga0075017_100524826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300006102\|Ga0075015_100824607	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300007258\|Ga0099793_10332017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300009519\|Ga0116108_1033915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1675	Open in IMG/M
3300009621\|Ga0116116_1078217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300009630\|Ga0116114_1013520	All Organisms → cellular organisms → Bacteria	2565	Open in IMG/M
3300009630\|Ga0116114_1145735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009643\|Ga0116110_1296046	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009644\|Ga0116121_1278221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009645\|Ga0116106_1265459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300009683\|Ga0116224_10358405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300009700\|Ga0116217_10809940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300009700\|Ga0116217_10981492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009764\|Ga0116134_1048270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1635	Open in IMG/M
3300010379\|Ga0136449_103223676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300010379\|Ga0136449_104207787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012350\|Ga0137372_10437682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300012354\|Ga0137366_10227399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300012925\|Ga0137419_11666191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012929\|Ga0137404_12300245	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300014159\|Ga0181530_10010048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8392	Open in IMG/M
3300014160\|Ga0181517_10696787	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300014162\|Ga0181538_10202877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300014162\|Ga0181538_10321149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300014164\|Ga0181532_10753191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300014167\|Ga0181528_10384052	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300014169\|Ga0181531_10880490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300014200\|Ga0181526_10055678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2521	Open in IMG/M
3300014200\|Ga0181526_10136469	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300014200\|Ga0181526_11022155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300014491\|Ga0182014_10385934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300014491\|Ga0182014_10508243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	590	Open in IMG/M
3300014498\|Ga0182019_10483106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300014502\|Ga0182021_11379475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300014638\|Ga0181536_10113280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1507	Open in IMG/M
3300015167\|Ga0167661_1026989	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300017822\|Ga0187802_10129831	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300017933\|Ga0187801_10015275	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300017955\|Ga0187817_10032901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3148	Open in IMG/M
3300017955\|Ga0187817_10131680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300017975\|Ga0187782_10218743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1428	Open in IMG/M
3300018014\|Ga0187860_1227926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300018016\|Ga0187880_1002621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13959	Open in IMG/M
3300018016\|Ga0187880_1316527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300018024\|Ga0187881_10447179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018037\|Ga0187883_10766893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018038\|Ga0187855_10569737	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018085\|Ga0187772_10998425	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300018086\|Ga0187769_10701593	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300019877\|Ga0193722_1105868	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021170\|Ga0210400_10324348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1266	Open in IMG/M
3300022521\|Ga0224541_1023551	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300024295\|Ga0224556_1164009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300025419\|Ga0208036_1030141	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300025444\|Ga0208189_1041177	Not Available	901	Open in IMG/M
3300025922\|Ga0207646_11663893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300026273\|Ga0209881_1038285	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300026341\|Ga0257151_1027493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300026469\|Ga0257169_1026654	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300027045\|Ga0207726_1046759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300027297\|Ga0208241_1077399	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300027432\|Ga0209421_1124416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300027546\|Ga0208984_1096282	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300027562\|Ga0209735_1075623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300027692\|Ga0209530_1008631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3225	Open in IMG/M
3300027729\|Ga0209248_10223070	Not Available	553	Open in IMG/M
3300027737\|Ga0209038_10191264	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300027745\|Ga0209908_10128207	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027908\|Ga0209006_10812276	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300028069\|Ga0255358_1015511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300028574\|Ga0302153_10052656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300028747\|Ga0302219_10117576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300028870\|Ga0302254_10335135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300028882\|Ga0302154_10193674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300029916\|Ga0302148_1014246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2358	Open in IMG/M
3300029954\|Ga0311331_10131520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3065	Open in IMG/M
3300029982\|Ga0302277_1095793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300029990\|Ga0311336_11469052	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300030049\|Ga0302191_10088138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300030053\|Ga0302177_10199535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300030524\|Ga0311357_10635732	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300031233\|Ga0302307_10542161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031236\|Ga0302324_100266451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2657	Open in IMG/M
3300031525\|Ga0302326_10043644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8687	Open in IMG/M
3300031525\|Ga0302326_13274926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031823\|Ga0307478_10596861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300032782\|Ga0335082_11542035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300032955\|Ga0335076_10523281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300033486\|Ga0316624_10093341	All Organisms → cellular organisms → Bacteria → Acidobacteria	2097	Open in IMG/M
3300033982\|Ga0371487_0025127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3953	Open in IMG/M
3300034091\|Ga0326724_0129615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.75%
Aquatic	Environmental → Aquatic	37.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.14%
Freshwater	Environmental → Aquatic → Freshwater	34.31%
Peat	Environmental → Terrestrial → Peat	19.61%
Sediment	Environmental → Aquatic → Sediment	2.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103302351	3300001356	Peatlands Soil	MAKTSSDGPRWIGIPARVFAMTFLFTALSFAIALLLSIMGTMVYSQVRHVAPNL
JGI12635J15846_100484526	3300001593	Forest Soil	MAKTASDGPLWIGIPVRAFAMTFLFTVLSFAVALLLSILGSVVY
Ga0062386_1012441592	3300004152	Bog Forest Soil	MAKPSSDGPRWIGIPARVFAMTFLFTLLSFAIALLLSILGAVVYSQVKHVAPNLTFAYRH
Ga0062388_1003366233	3300004635	Bog Forest Soil	MVNTSSSGPRWIGIPARVFAMTFLFTVLSFAVALLLSILG
Ga0070708_1006279992	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPGTTSGRPRWIGIPLRVLLMTALLTLLAFAVSLLLSILGTVVYSQVKHVAPNM
Ga0070708_1006581912	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTSSGGPRWTGIPVRVLAMTFLLTLLSFAVALLLSILGT
Ga0070707_1001097681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTSSGRPRWIGIPARVFAMTFLLTLLSFAVALLLSILGTVVYSQVKH
Ga0066703_102379454	3300005568	Soil	MGKTSSGGPRWIGIPARVLAMTFLLTLLSFAVALLLSILGTVVYSQVKHVAP
Ga0066691_102271034	3300005586	Soil	MGKTSSGGPRWIGIPARVLAMTFLFTLLSFAVALLLSILGTVVYSQVKHVAPNL
Ga0066790_101130833	3300005995	Soil	MAKTNSDGPRWIGIPVRVFALTFLLTLLSFAVALLLSIMGTVVYSQMKHVA
Ga0075017_1002150471	3300006059	Watersheds	MPKTESTRLRWIGIPVRAFALTFLLTLLSFAVALLLSILGTIVYSQIQH
Ga0075017_1005248261	3300006059	Watersheds	MLSRTSPRWIGIPFRVFAITFLLTLLSFAVALLLSILGTIVYSQVKHVAPN
Ga0075015_1008246072	3300006102	Watersheds	MAKTNSDGLRWIGIPARVFAMTFLFTVLSFAVALLLSILGTVVY
Ga0099793_103320171	3300007258	Vadose Zone Soil	MPQTTSGRPRWVGIPLRVLLTTAVVTLLAFAVSLLLSILGTVVYSQVQHVAPNMPFA
Ga0116108_10339153	3300009519	Peatland	MNMAKTSSDGPRWIGIPARVFAITFLLTLLSFAVALLLSIMGTVVYSQVKH
Ga0116116_10782172	3300009621	Peatland	MNMAKTSSDGPRWIGIPARVFAITFLLTLLSFAVALLLSIMGTVVYSQVK
Ga0116114_10135201	3300009630	Peatland	MARTSSDGPRWIGIPARVFAVTFLITLLSFAVALLLSIVGIVVYSQVKHVAPNLTFA
Ga0116114_11457352	3300009630	Peatland	MTMAKTSSDGPRWIGIPARVFAVTFLLTLLSFAVALLLSIMGT
Ga0116110_12960461	3300009643	Peatland	MGRTSSDGPRWIGIPARVFLMTFLLTLLSFAIALL
Ga0116121_12782211	3300009644	Peatland	MGKKGSEGPRWIGIPARVFAMTFLFTLLAFAVALLLSILGTVVYSQVKH
Ga0116106_12654591	3300009645	Peatland	MAQTGSGGLRWIGIPARVFAMTFLFTLLSFAVALLLSIM
Ga0116224_103584052	3300009683	Peatlands Soil	MGETSSDGPRWIGIPARVFAMTFLSTLLSFAIALLLSIMGTVVYSQVRHVAPN
Ga0116217_108099401	3300009700	Peatlands Soil	MAKLSSDGPRWIGIPARVFAMTFLLTLLSFAVALL
Ga0116217_109814922	3300009700	Peatlands Soil	MAQTSSGGLRWIGIPARVFAMTFLFTLLSFAVALLLSIMGTVVYSQVKHVAPNLTFAY
Ga0116134_10482701	3300009764	Peatland	MSMAKTSSDGPRWIGIPARVFATTFLLTLLSFAVALLL
Ga0136449_1032236762	3300010379	Peatlands Soil	MAKASSGGPRWIGIPARVFAMTFLFTLLSFAVALLLSIMGTVVYAQVKHVAPNLTF
Ga0136449_1042077871	3300010379	Peatlands Soil	MGETSSGGPRWIGIPMRVFAMTFLFTALSFAIALLL
Ga0137372_104376821	3300012350	Vadose Zone Soil	MAQTSSSQPRWTGIPFRVLAVTILLTLLAFAIALLLGILGTVV
Ga0137366_102273991	3300012354	Vadose Zone Soil	MASSKSARPRWIGIPFRVLAVTLLLTLLSFAVALLLSILGTIVYARGSGTS
Ga0137419_116661912	3300012925	Vadose Zone Soil	MSQTVSQQPRWVGIPVRVVLTTVVVTLLAFAVGLLLSILGTVVYSQVKHVAP
Ga0137404_123002451	3300012929	Vadose Zone Soil	MEKAGSVARWIAVPARVVAITFLFTLLSFAVALLLSILGTVVYSQVKHVA
Ga0181530_1001004810	3300014159	Bog	MGRTSSDGPRWIGIPARVFLMTFLLTLLSFAIALLLSILG
Ga0181517_106967872	3300014160	Bog	MLKSGLTRRRWLGIPARVFGFTFLLTLLSFAVALLLSILGTIIYAEV
Ga0181538_102028771	3300014162	Bog	MAKTSSDGPRWIGIPVRVFAMTFLLTLLSFAIALLLS
Ga0181538_103211491	3300014162	Bog	MAKTSSDGPRWIGIPARVFAMTFLFTVLSFAVALLLS
Ga0181532_107531912	3300014164	Bog	MAKTSSDGPRWIGIPVRVFAMTFLLTLLSFAIALLL
Ga0181528_103840522	3300014167	Bog	MLKSGSTRRRWLGIPARVFGFTFLLTLLSFAVALLLSILGTIIYAEVEHLP
Ga0181531_108804901	3300014169	Bog	MLKSGSTRRRWLGIPARVFGFTFVLTLLSFAVALLLSILGTIIYAEVEHLPPN
Ga0181526_100556781	3300014200	Bog	MAKTSSDGPRWIGIPVRVFAMTFLLTLLSFAIALLLSILGMVVYSQVKHVAPNLTFAYR
Ga0181526_101364691	3300014200	Bog	MSMAKTSSDGPRWIGIPARVFAMTFLFTLLSFAVAL
Ga0181526_110221551	3300014200	Bog	MTMAKTSSDGPRWIGIPARVFAMTFLFTLLSFAVALLLSIM
Ga0182014_103859342	3300014491	Bog	MAKTSSDGPRWIGIPARVFAMTFLLTLLSFAVALLLSI
Ga0182014_105082431	3300014491	Bog	MTMAKTSSEGPRWIGIPARVFAVTFLLTLLSFAVA
Ga0182019_104831062	3300014498	Fen	MSMAKTNSDGPRWIGIPARVFAMTFLLTLLSFAVALLLSVMGIVVYSQMKHVAPNLAFAY
Ga0182021_113794752	3300014502	Fen	MAKTSSDGPRWIGIPARVFAMTFLLTLLSFAVALLLSIMGTVIYSQMKHVAPNL
Ga0181536_101132801	3300014638	Bog	MAKTSSDGPRWIGIPARVFAMTFLFTALSFAVALLLSIMGTVVYSQVRH
Ga0167661_10269891	3300015167	Glacier Forefield Soil	MAKTSSDGPRWIGIPVRVFAMTFLLTLLSFAVALLLSIMGTVV
Ga0187802_101298313	3300017822	Freshwater Sediment	MANPSLDGPRWIGIPVRVFAMTFLLTLLSFAIALLLSILGTVVYSQVK
Ga0187801_100152753	3300017933	Freshwater Sediment	MPSSESKQPRWIGIPFRVFAVTFLLTVLSFAVALLLSILG
Ga0187817_100329011	3300017955	Freshwater Sediment	MSKTASARPRWIGIPFRVFAVTFLLTLLSFAVALLLSILGTIVYSQVE
Ga0187817_101316801	3300017955	Freshwater Sediment	MGKTGSNGLRWIGVPARVFAMTFLFTLLSFAVALLLS
Ga0187782_102187433	3300017975	Tropical Peatland	MAESNAGRPGWIGVPVRALLVTFLFTLLSFAVALLLSILGTVVYSQVE
Ga0187860_12279261	3300018014	Peatland	MAKTSSDGPRWIGIPARVFAITFLSTLLSFAVALLLSIMGTVVYSQVRHVAPNL
Ga0187880_10026211	3300018016	Peatland	MARTSSDGPRWIGIPARVFAVTFLITLLSFAVALLLSIVGIVVYSQVKHV
Ga0187880_13165272	3300018016	Peatland	MAKTSSDGPRWIGIPARVFAITFLSTALSFAVALLLSIMGTVVYSQVRHVAP
Ga0187881_104471791	3300018024	Peatland	MAKTSSDGPRWIGIPARVFAMTFLLTLLAFAVALLLSIMGTVVYSQVRHV
Ga0187883_107668931	3300018037	Peatland	MGETSSDGPRWIGIPARVLAMTFLSTLLSFAIALLLSIM
Ga0187855_105697372	3300018038	Peatland	MATTTSDGPRWIGIPARVVAMTLLLTLLSFAIALLLSIMGTVVYSQVK
Ga0187772_109984252	3300018085	Tropical Peatland	MLKAESERPRWIGVPVRALAVTFLLTLLSFAVALLLSILGTVVYSQVEHVAPPLQFAY
Ga0187769_107015931	3300018086	Tropical Peatland	MARAETPRLRWIGVPVRALAVTFLFTLLSFAVALLLSILGTVVYSQVEHVAPNLPFAYR
Ga0193722_11058682	3300019877	Soil	VAEEIPKPRWIGIPLRAVAVTFLFTVLSFAVALLLSILGTIVYSQVKH
Ga0210400_103243483	3300021170	Soil	MAKRSSGGPRWIGIPARVFAMTFLLTVLSFAVALL
Ga0224541_10235512	3300022521	Soil	MAQTSSEGPRWIGIPVRVFAMTFLFTVLSFAVALLLSILGTVVYSQVKHVAPNLTFAYRH
Ga0224556_11640092	3300024295	Soil	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILGTVVYSQVK
Ga0208036_10301411	3300025419	Peatland	MNMAKTSSDGPRWIGIPARVFAITFLLTLLSFAVA
Ga0208189_10411771	3300025444	Peatland	MARTSSDGPRWIGIPARVFAVTFLITLLSFAVALLLSIVGIVVYSQVKHVAPNLTF
Ga0207646_116638931	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTSSGRPRWIGIPARVFAMTFLLTLLSFAVALLLSILGTVVYSQ
Ga0209881_10382853	3300026273	Soil	MGKTGSNGLRWIGIPVRAFAMTFLFTLLSFAVALLLSILGTMVY
Ga0257151_10274931	3300026341	Soil	MPQTISARPRWIGIPVRVLLTTVVVTLLAFAVSLLLSILGTVVYSQVKHVAPNMPYAYRY
Ga0257169_10266543	3300026469	Soil	MAKRSSGGPRWIGIPARVFAMTFLLTVLSFAVALLVSILGT
Ga0207726_10467591	3300027045	Tropical Forest Soil	MPEASSNQPRWITIPFSVLAVTFLLTLLSFAVALLLSILGSIVY
Ga0208241_10773992	3300027297	Forest Soil	MAKTGAGGPRWVGIPVRVFAMTFLFTVLSFAVALLLSILGTVVYSQV
Ga0209421_11244161	3300027432	Forest Soil	MARTTSDGPRWIGIPARVFAMTFLFTLLSFAVALLLSILGTVVYSQVKHVAPNLTFA
Ga0208984_10962822	3300027546	Forest Soil	MGKASSGGPRWIGIPARVFALTFLLTLLSFAVALLLSILGTVVYS
Ga0209735_10756231	3300027562	Forest Soil	MAKRSSGGPRWIGIPARVFAMTFLLTVLSFAVALLVSILGTVVYS
Ga0209530_10086311	3300027692	Forest Soil	MARTTSDGPRWIGIPARVFAMTFLFTLLSFAIALLLSILGTVVYSQVKHVAP
Ga0209248_102230702	3300027729	Bog Forest Soil	MAKADSSGPRWIGIPARVFAMTFLFTLLTFAVALLLSILGT
Ga0209038_101912641	3300027737	Bog Forest Soil	MADTSSSRLGWMLIPARVFAMTFLFTLLSFAVALLLS
Ga0209908_101282071	3300027745	Thawing Permafrost	MGKTSSDGPRWIGIPARAFAMTFLFTLLSFAIALLLSILGTVVYSQVKHVAPNLTFA
Ga0209006_108122762	3300027908	Forest Soil	MPRTEVERPRLIGIAARVLAFTVLGTLLSFAVALLLSILGTVIYSRIEHVAPN
Ga0255358_10155112	3300028069	Soil	MSMAKTSSDGPRWIGIPARVFAMTFLLTLLSFAVALLLSIMGTVIY
Ga0302153_100526563	3300028574	Bog	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILGTVVYSQVKHVAP
Ga0302219_101175761	3300028747	Palsa	MAETVSDGPRWIGIPARVIALTFLLTLLSFAVALLLSILGTVVYSQVKHVAPNLT
Ga0302254_103351351	3300028870	Fen	MPEAISSRPRWIAIPFRVLLMTSLLTLLAFAVALLLSILGTIVYSQVEHVAP
Ga0302154_101936742	3300028882	Bog	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILG
Ga0302148_10142461	3300029916	Bog	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILGTVVY
Ga0311331_101315201	3300029954	Bog	MGKTNADGAGWIGVPVRVVAMTFLFTVLSFAVALLLSILGT
Ga0302277_10957931	3300029982	Bog	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILGTVVYSQVKH
Ga0311336_114690522	3300029990	Fen	MSMAKTSSDGPRWIGIPARVFAMTFLLTLLSFAVALLLSIMGTVIYSQMKHVAPNL
Ga0302191_100881382	3300030049	Bog	MGKTNADGPRWIGIPFRVFAMTFLLTLLSFAVALLLSILGTVVYSQVKHVAPNL
Ga0302177_101995351	3300030053	Palsa	MAKASSEGPRWILIPARVFAMTFLFTLLSFAVALLL
Ga0311357_106357323	3300030524	Palsa	MAKTGSDRPRWIGIPARVFVFTFLFTVLTFAVALLLSILGTVVYSQVKHV
Ga0302307_105421611	3300031233	Palsa	VGKTSSDGLRWIGIPARAFAMTFLFTLLSFAVALLLGILGTVVYSQVKHVAPNLTFAYR
Ga0302324_1002664515	3300031236	Palsa	MAETVSDGPRWIGIPARVIALTFLLTLLSFAVALLLSILGTVVYSQVKHV
Ga0302326_100436448	3300031525	Palsa	MAQTSSEGPRWIGIPVRVFAMTFLFTVLSFAVALLLSILGTVVYSQVKHV
Ga0302326_132749261	3300031525	Palsa	MAKSASNGPRWIGIPARVFAMTFLFTLLSFAVALLLSILGTVVY
Ga0307478_105968611	3300031823	Hardwood Forest Soil	MAKTTSDAPRWIGIPARVFAMTFLLTVLSFAVALLL
Ga0335082_115420352	3300032782	Soil	MPKANSDRPRWTGIPVRVVLMTALFTLLAFAVSLLLSILGTLVYS
Ga0335076_105232811	3300032955	Soil	MAGSETGRPRWIGIPVRALLVTFLLTLLSFAVALLLSILGTIVYSQVEHVAPNLPFAYR
Ga0316624_100933414	3300033486	Soil	MGKTGSNGLRWIGIPVRAFAMTFLFTLLSFAVALLLSIL
Ga0371487_0025127_3778_3951	3300033982	Peat Soil	MANAGSARPGWIGVPVRALLVTFLFTLLSFAVALLLSILGTVVYSQVVHVAPNLQYAY
Ga0326724_0129615_1_144	3300034091	Peat Soil	MAKTSSDGPRWIGIPVRVFAVTFLLTLLSFAIALLLSIMGTVVYSQMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences