Metagenome / Metatranscriptome Family F100400

Basic Information
Family ID	F100400
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	45 residues
Representative Sequence	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFA
Number of Associated Samples	78
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	95.79 %
% of genes near scaffold ends (potentially truncated)	92.16 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (71.569 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (37.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.078 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1B570J13875_1026572 2JGI25930J51415_10248171 3Ga0049081_103069621 4Ga0078894_100710638 5Ga0078894_106794062 6Ga0078894_114190342 7Ga0102917_12360462 8Ga0102919_10296571 9Ga0102920_12026392 10Ga0102921_12795712 11Ga0102871_12248331 12Ga0102878_12349662 13Ga0102867_11114002 14Ga0105747_12040862 15Ga0114340_11322921 16Ga0114341_102393321 17Ga0114341_105324262 18Ga0114343_10389271 19Ga0114343_11730741 20Ga0114343_11882141 21Ga0114344_10549591 22Ga0114344_12509472 23Ga0114346_10764301 24Ga0114347_101823910 25Ga0114355_11725551 26Ga0114355_12524081 27Ga0114355_12569512 28Ga0114840_10291192 29Ga0114337_11564012 30Ga0114876_12640602 31Ga0114880_11861951 32Ga0114880_12021001 33Ga0114880_12123121 34Ga0102887_10682952 35Ga0114979_105382262 36Ga0114967_101456541 37Ga0129333_100495901 38Ga0129333_104704601 39Ga0129333_114949081 40Ga0129333_117075861 41Ga0157624_10819522 42Ga0170791_101057271 43Ga0211732_13103771 44Ga0211729_106436712 45Ga0222713_105609661 46Ga0222712_103452962 47Ga0222712_107603902 48Ga0214919_105626461 49Ga0244775_104887752 50Ga0244775_106049041 51Ga0255106_10458532 52Ga0255113_10821312 53Ga0255115_10005991 54Ga0255063_100004552 55Ga0208797_10248482 56Ga0208921_10005891 57Ga0208800_10439001 58Ga0208803_10646721 59Ga0208173_10440182 60Ga0208440_10324232 61Ga0208440_10664892 62Ga0208441_10385271 63Ga0255127_10473482 64Ga0208923_10798041 65Ga0255137_10904191 66Ga0255077_11140692 67Ga0255125_10281272 68Ga0208897_10102901 69Ga0255123_10643261 70Ga0255118_10287971 71Ga0255122_10215982 72Ga0209599_102247032 73Ga0209442_13153862 74Ga0209596_11852622 75Ga0209972_102007162 76Ga0209400_13759252 77Ga0247723_10562041 78Ga0247723_10602312 79Ga0247723_11532062 80Ga0315907_105925032 81Ga0315907_106226992 82Ga0315907_109511061 83Ga0315909_103864141 84Ga0315904_107212572 85Ga0315904_108826431 86Ga0315904_113932431 87Ga0315901_103593172 88Ga0315901_105065081 89Ga0315902_104590392 90Ga0315903_101702731 91Ga0334985_0362142_2_112 92Ga0334995_0509788_3_140 93Ga0335020_0009572_2_172 94Ga0335012_0305555_668_805 95Ga0335029_0019586_3_119 96Ga0335036_0017950_5602_5718 97Ga0335050_0324237_3_158 98Ga0335055_0383623_419_583 99Ga0335049_0605835_571_678 100Ga0335049_0903422_1_117 101Ga0335007_0289672_968_1078 102Ga0335013_0416804_672_821
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1B570J13875_1026572 2JGI25930J51415_10248171 3Ga0102878_12349662 4Ga0114343_10389271 5Ga0114880_12123121 6Ga0129333_117075861
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1B570J13875_1026572 2JGI25930J51415_10248171 3Ga0102878_12349662 4Ga0114343_10389271 5Ga0114880_12123121 6Ga0129333_117075861
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.89% β-sheet: 0.00% Coil/Unstructured: 11.11%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF06067	DUF932	6.86
PF13392	HNH_3	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.88 %
Unclassified	root	N/A	9.80 %
Viruses	superkingdom	All Organisms → Viruses	84.31 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.88 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	71.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	5.88 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	71.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	5.88 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	71.57 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	71.57 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	69.61 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.75 %
Unclassified	root	N/A	9.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	69.61 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003499\|JGI25930J51415_1024817	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300005581\|Ga0049081_10306962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300005662\|Ga0078894_10071063	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3006	Open in IMG/M
3300005662\|Ga0078894_10679406	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	910	Open in IMG/M
3300005662\|Ga0078894_11419034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300007590\|Ga0102917_1236046	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	635	Open in IMG/M
3300007597\|Ga0102919_1029657	All Organisms → Viruses → Predicted Viral	1689	Open in IMG/M
3300007600\|Ga0102920_1202639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	637	Open in IMG/M
3300007603\|Ga0102921_1279571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300007620\|Ga0102871_1224833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.08%
Terrestrial	Environmental → Terrestrial	3.92%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.92%
Freshwater	Environmental → Aquatic → Freshwater	68.63%
Marine	Environmental → Aquatic → Marine	27.45%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.67%
Lake	Environmental → Aquatic → Freshwater → Lake	39.22%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.84%
River	Environmental → Aquatic → Freshwater → River	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	16.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.98%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	16.67%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.94%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.73%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.78%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	10.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.88%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.92%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	14.71%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001267	Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J13875_1026572	3300001267	Freshwater	MDKGSFLENENQMVIDAEMQTIAEQLLDDWITTNLDEGTL
JGI25930J51415_10248171	3300003499	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADK
Ga0049081_103069621	3300005581	Freshwater Lentic	MASFLEDVNQMVIDACYQDIAEQLLDDWINSNLDEGQYYADKQFAEMSGDKF
Ga0078894_100710638	3300005662	Freshwater Lake	MASFLEDVNQMVIDAVYQDISEQLLEQWINNNLDEG
Ga0078894_106794062	3300005662	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQF
Ga0078894_114190342	3300005662	Freshwater Lake	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEG
Ga0102917_12360462	3300007590	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYYADKQFA
Ga0102919_10296571	3300007597	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDE
Ga0102920_12026392	3300007600	Estuarine	MASFLEDVNQMVIDACYQDIAEQLLDDWINSNLDEGQYYADKQ
Ga0102921_12795712	3300007603	Estuarine	MASFLEDVNQMVIDACYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDK
Ga0102871_12248331	3300007620	Estuarine	MASFLEDVNQMVIDAVYQDISEQLLEQWINNNLDEGQYYADKQ
Ga0102878_12349662	3300007624	Estuarine	MASFLEDVNQMVIDSCYQEIAEQLLDDWINSNLEEGQYYADRQFALMSSDSYI
Ga0102867_11114002	3300007716	Estuarine	MASFLEDVNQMVIDSCYQEIAEQLLDDWINSNLEEGQYYADRQFALMSSDSY
Ga0105747_12040862	3300007974	Estuary Water	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQ
Ga0114340_11322921	3300008107	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQ
Ga0114341_102393321	3300008108	Freshwater, Plankton	MPMSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGD
Ga0114341_105324262	3300008108	Freshwater, Plankton	MASFLEDVNQMVIDACYQDIAEQLLEGWINSNLDEGQYYADKQFAEMSGDE
Ga0114343_10389271	3300008110	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDISEQLLEQWINNNLDEGQYYADKQFAEMSGDKFIYAE
Ga0114343_11730741	3300008110	Freshwater, Plankton	MSSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADK
Ga0114343_11882141	3300008110	Freshwater, Plankton	MSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADK
Ga0114344_10549591	3300008111	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDRF
Ga0114344_12509472	3300008111	Freshwater, Plankton	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKFV
Ga0114346_10764301	3300008113	Freshwater, Plankton	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEM
Ga0114347_101823910	3300008114	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGDEDYL*
Ga0114355_11725551	3300008120	Freshwater, Plankton	MDKGSFIENENQMVIDAEMQTIAEQLLDDWITTNLDEGTLYSDW
Ga0114355_12524081	3300008120	Freshwater, Plankton	MPMSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGDEFIY
Ga0114355_12569512	3300008120	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGDEFIY
Ga0114840_10291192	3300008258	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFA
Ga0114337_11564012	3300008262	Freshwater, Plankton	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDRFIQD
Ga0114876_12640602	3300008448	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEG
Ga0114880_11861951	3300008450	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMS
Ga0114880_12021001	3300008450	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGDKF
Ga0114880_12123121	3300008450	Freshwater Lake	MSFLENENQMVIDAELQEIAEQLLEEWINSNLDEG
Ga0102887_10682952	3300008961	Estuarine	MASFLEDVNQMVIDSCYQEIAEQLLDDWINSNLEEGQYYADRQFALMSSDSYIQSEFN
Ga0114979_105382262	3300009180	Freshwater Lake	MASFLEDVNQMVIDAVYQEIAEQLLEDWINNNLDEGQYYADKQFAEMS
Ga0114967_101456541	3300010160	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYYADKQFAEMS
Ga0129333_100495901	3300010354	Freshwater To Marine Saline Gradient	MASFLEDVNQMVIDACYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDKFIYDEF
Ga0129333_104704601	3300010354	Freshwater To Marine Saline Gradient	MDKGSFLENENQMVIDAEMQTIAEQLLDDWITTNLD
Ga0129333_114949081	3300010354	Freshwater To Marine Saline Gradient	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDKFIYDEF
Ga0129333_117075861	3300010354	Freshwater To Marine Saline Gradient	MASFLEDENQMVIDAELQAIADHLLTEWINSNLDEGQLYSDYQIASMCDSNYLK
Ga0157624_10819522	3300012764	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSG
Ga0170791_101057271	3300013295	Freshwater	MASFLEDVNQMVIDSVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDK
Ga0211732_13103771	3300020141	Freshwater	MASFLEDVNQMVIDAVYQEIAEQLLEDWINNNLDEGQYYADKQFAEMSGD
Ga0211729_106436712	3300020172	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDE
Ga0222713_105609661	3300021962	Estuarine Water	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYY
Ga0222712_103452962	3300021963	Estuarine Water	MASFLEDVNQMVIDACYQDIAEQLLEDWINNNLDEGQYYAD
Ga0222712_107603902	3300021963	Estuarine Water	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSG
Ga0214919_105626461	3300023184	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKFIQ
Ga0244775_104887752	3300024346	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQY
Ga0244775_106049041	3300024346	Estuarine	MASFLEDVNQMVIDAVYQEIAEQLLEQWINNNLDEGQYY
Ga0255106_10458532	3300027125	Freshwater	MASFLEDVNQMVIDAVYQEIAEQLLENWINSNLDEGQYY
Ga0255113_10821312	3300027147	Freshwater	MASFLEDVNQMVIDAVYQEIAEQLLENWINSNLDEGQYYADKQF
Ga0255115_10005991	3300027148	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDEFI
Ga0255063_100004552	3300027151	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEM
Ga0208797_10248482	3300027186	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYYA
Ga0208921_10005891	3300027188	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQ
Ga0208800_10439001	3300027193	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEG
Ga0208803_10646721	3300027232	Estuarine	MASFLEDVNQMVIDSCYQEIAEQLLDDWINSNLEEGQYYADRQFALMSSDS
Ga0208173_10440182	3300027244	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYY
Ga0208440_10324232	3300027281	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYY
Ga0208440_10664892	3300027281	Estuarine	MASFLEDVNQMVIDSCYQEIAEQLLDDWINSNLEEGQYYADRQFALMSSDSYIQSE
Ga0208441_10385271	3300027294	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQY
Ga0255127_10473482	3300027301	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDNWINSNLEEGQYYADKQFAWMS
Ga0208923_10798041	3300027320	Estuarine	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDKFIQDE
Ga0255137_10904191	3300027375	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDNWINSNLEEGQYYADKQFAWMSDDKFIQSE
Ga0255077_11140692	3300027529	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFAEMSGDR
Ga0255125_10281272	3300027534	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDNWINSNLEEGQYYA
Ga0208897_10102901	3300027571	Estuarine	MASFLEDVNQMVIDACYQEIAEQLLEQWINNNLDEGQYYAD
Ga0255123_10643261	3300027589	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDNWINSNLEEGQYYADKQFAWMSDDKFIQSEFN
Ga0255118_10287971	3300027593	Freshwater	MSSFLEDVNQMVIDACYQEIAEQLLENWINSNLDEGQYYADKQFAWMSDDKFIQSE
Ga0255122_10215982	3300027595	Freshwater	MASFLEDVNQMVIDAVYQEIAEQLLENWINSNLDEGQYYADKQFAWMS
Ga0209599_102247032	3300027710	Deep Subsurface	MASFLEDVNQMVIDAVYQEIAEQLLENWINSNLEEGQYYADKQFAWMSDDKFIQSEF
Ga0209442_13153862	3300027732	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYAD
Ga0209596_11852622	3300027754	Freshwater Lake	MASFLEDVNQMVIDAVYQEIAEQLLEDWINNNLDEG
Ga0209972_102007162	3300027793	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEG
Ga0209400_13759252	3300027963	Freshwater Lake	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYADKQFA
Ga0247723_10562041	3300028025	Deep Subsurface Sediment	MASFLEDVNQMVIDACYQDIAEQLLEDWINNNLDEGQYYA
Ga0247723_10602312	3300028025	Deep Subsurface Sediment	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADK
Ga0247723_11532062	3300028025	Deep Subsurface Sediment	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKFIQ
Ga0315907_105925032	3300031758	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGDK
Ga0315907_106226992	3300031758	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYA
Ga0315907_109511061	3300031758	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLEDWINNNLDEGQYYA
Ga0315909_103864141	3300031857	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQ
Ga0315904_107212572	3300031951	Freshwater	MDKGSFLENENQMVIDAEMQTIAEQLLDDWITTNLDEGTLYS
Ga0315904_108826431	3300031951	Freshwater	MSSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQ
Ga0315904_113932431	3300031951	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDE
Ga0315901_103593172	3300031963	Freshwater	MSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSGD
Ga0315901_105065081	3300031963	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDEFI
Ga0315902_104590392	3300032093	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAEMSG
Ga0315903_101702731	3300032116	Freshwater	MSSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQF
Ga0334985_0362142_2_112	3300034018	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQ
Ga0334995_0509788_3_140	3300034062	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAE
Ga0335020_0009572_2_172	3300034082	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKFVQSEF
Ga0335012_0305555_668_805	3300034093	Freshwater	MASFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEGQYYADKQFAE
Ga0335029_0019586_3_119	3300034102	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYY
Ga0335036_0017950_5602_5718	3300034106	Freshwater	MDKGSFLENENQMVIDAEMQTIAEQLLDDWITTNLDEGT
Ga0335050_0324237_3_158	3300034108	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKF
Ga0335055_0383623_419_583	3300034110	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLEDWINSNLDEGQYYADKQFAEMSGDKFVQS
Ga0335049_0605835_571_678	3300034272	Freshwater	MSSFLEDVNQMVIDAVYQDIAEQLLDDWINNNLDEG
Ga0335049_0903422_1_117	3300034272	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDDWINSNLDEGQYY
Ga0335007_0289672_968_1078	3300034283	Freshwater	MDKGSFLENENQMVIDAEMQTIAEQLLDDWITTNLDE
Ga0335013_0416804_672_821	3300034284	Freshwater	MASFLEDVNQMVIDACYQDIAEQLLDDWINSNLDEGQYYADKQFAEMSGD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences