Metagenome / Metatranscriptome Family F100388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	73 residues
Representative Sequence	MLATKEHVNGHYEVTKTPWATDYVWVPGEEEVEGRLLDEVLHPWHATYAEWVKEERVHPEEQLRMEMETL
Number of Associated Samples	43
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.00 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	75.49 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (57.843 % of family members)
Environment Ontology (ENVO)	Unclassified (58.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.431 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.63% β-sheet: 8.16% Coil/Unstructured: 60.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF09851	SHOCT	3.92
PF03364	Polyketide_cyc	2.94
PF00582	Usp	1.96
PF01565	FAD_binding_4	1.96
PF00561	Abhydrolase_1	0.98
PF08282	Hydrolase_3	0.98
PF01206	TusA	0.98
PF01988	VIT1	0.98
PF07883	Cupin_2	0.98
PF00462	Glutaredoxin	0.98
PF00069	Pkinase	0.98
PF02776	TPP_enzyme_N	0.98
PF08448	PAS_4	0.98
PF03446	NAD_binding_2	0.98
PF12724	Flavodoxin_5	0.98
PF00872	Transposase_mut	0.98
PF08450	SGL	0.98
PF08803	ydhR	0.98
PF00011	HSP20	0.98
PF01966	HD	0.98
PF13426	PAS_9	0.98
PF01382	Avidin	0.98
PF00989	PAS	0.98
PF00072	Response_reg	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.92
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.98
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.98
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.98
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.98
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.98
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.98
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.98
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.98
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.98
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.98
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.82 %
Unclassified	root	N/A	40.20 %
Viruses	superkingdom	All Organisms → Viruses	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.88 %
Unclassified	root	N/A	40.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.10 %
Unclassified	root	N/A	40.20 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.14 %
Unclassified	root	N/A	40.20 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	38.24 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	38.24 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	38.24 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	23.53 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	7.84 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	2.94 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	23.53 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	7.84 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.94 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	1.96 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	0.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805011\|FNTS010_GJXY8QZ02JH4R0	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	541	Open in IMG/M
2119805012\|FNTS067_GJ87FRN01EEXLD	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	506	Open in IMG/M
2209111000\|2209226333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	620	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c005767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2282	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c049605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	736	Open in IMG/M
3300002568\|C688J35102_120937048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2595	Open in IMG/M
3300005562\|Ga0058697_10038574	Not Available	1780	Open in IMG/M
3300005562\|Ga0058697_10043140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1701	Open in IMG/M
3300005562\|Ga0058697_10063061	Not Available	1453	Open in IMG/M
3300007790\|Ga0105679_10550420	Not Available	1002	Open in IMG/M
3300009789\|Ga0126307_10041165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3587	Open in IMG/M
3300009789\|Ga0126307_10109148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2197	Open in IMG/M
3300009789\|Ga0126307_10148292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	1877	Open in IMG/M
3300009789\|Ga0126307_10287502	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1323	Open in IMG/M
3300009789\|Ga0126307_10296078	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300009789\|Ga0126307_10321999	Not Available	1245	Open in IMG/M
3300009789\|Ga0126307_10540018	Not Available	941	Open in IMG/M
3300009789\|Ga0126307_10753620	All Organisms → cellular organisms → Bacteria → Terrabacteria group	786	Open in IMG/M
3300009789\|Ga0126307_11103006	Not Available	642	Open in IMG/M
3300009789\|Ga0126307_11192134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	616	Open in IMG/M
3300009789\|Ga0126307_11527017	Not Available	542	Open in IMG/M
3300009840\|Ga0126313_10069076	Not Available	2535	Open in IMG/M
3300009840\|Ga0126313_10097189	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300009840\|Ga0126313_10659831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	845	Open in IMG/M
3300010036\|Ga0126305_10074415	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300010036\|Ga0126305_10104386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300010036\|Ga0126305_10119029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	1610	Open in IMG/M
3300010036\|Ga0126305_10241298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1159	Open in IMG/M
3300010036\|Ga0126305_10322212	Not Available	1007	Open in IMG/M
3300010036\|Ga0126305_10713988	Not Available	678	Open in IMG/M
3300010036\|Ga0126305_10908257	Not Available	602	Open in IMG/M
3300010036\|Ga0126305_11151317	Not Available	535	Open in IMG/M
3300010036\|Ga0126305_11190672	Not Available	526	Open in IMG/M
3300010037\|Ga0126304_10011703	All Organisms → cellular organisms → Bacteria	4804	Open in IMG/M
3300010037\|Ga0126304_10161590	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300010037\|Ga0126304_10314362	Not Available	1039	Open in IMG/M
3300010037\|Ga0126304_10382524	Not Available	938	Open in IMG/M
3300010038\|Ga0126315_10031900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2746	Open in IMG/M
3300010038\|Ga0126315_10241449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1100	Open in IMG/M
3300010038\|Ga0126315_10360899	Not Available	907	Open in IMG/M
3300010038\|Ga0126315_10931558	Not Available	579	Open in IMG/M
3300010039\|Ga0126309_10115975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1400	Open in IMG/M
3300010040\|Ga0126308_10015249	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300010040\|Ga0126308_10461233	Not Available	854	Open in IMG/M
3300010040\|Ga0126308_10918015	Not Available	611	Open in IMG/M
3300010040\|Ga0126308_10920731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300010041\|Ga0126312_10056158	Not Available	2645	Open in IMG/M
3300010042\|Ga0126314_10200832	Not Available	1405	Open in IMG/M
3300010042\|Ga0126314_10269791	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1210	Open in IMG/M
3300010042\|Ga0126314_11313658	Not Available	542	Open in IMG/M
3300010042\|Ga0126314_11321115	Not Available	541	Open in IMG/M
3300010044\|Ga0126310_10008688	Not Available	4618	Open in IMG/M
3300010044\|Ga0126310_10059597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	2159	Open in IMG/M
3300010044\|Ga0126310_10154640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1464	Open in IMG/M
3300010044\|Ga0126310_10476903	Not Available	906	Open in IMG/M
3300010044\|Ga0126310_10736843	Not Available	751	Open in IMG/M
3300010045\|Ga0126311_10041839	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300010045\|Ga0126311_10584589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	883	Open in IMG/M
3300010045\|Ga0126311_11306486	Not Available	603	Open in IMG/M
3300010045\|Ga0126311_11564882	Not Available	554	Open in IMG/M
3300010166\|Ga0126306_10006652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7067	Open in IMG/M
3300010166\|Ga0126306_10044426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3055	Open in IMG/M
3300010166\|Ga0126306_10076441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2377	Open in IMG/M
3300010166\|Ga0126306_10155581	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1701	Open in IMG/M
3300010166\|Ga0126306_10223442	Not Available	1429	Open in IMG/M
3300010166\|Ga0126306_10337594	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300010166\|Ga0126306_11099822	Not Available	651	Open in IMG/M
3300011332\|Ga0126317_10011690	Not Available	580	Open in IMG/M
3300012469\|Ga0150984_111273255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	674	Open in IMG/M
3300014487\|Ga0182000_10617866	Not Available	525	Open in IMG/M
3300014497\|Ga0182008_10134655	Not Available	1233	Open in IMG/M
3300018432\|Ga0190275_10002629	All Organisms → cellular organisms → Bacteria	12845	Open in IMG/M
3300018432\|Ga0190275_10033023	All Organisms → cellular organisms → Bacteria	4173	Open in IMG/M
3300018432\|Ga0190275_10053864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3374	Open in IMG/M
3300018432\|Ga0190275_10618140	Not Available	1133	Open in IMG/M
3300018432\|Ga0190275_10664002	Not Available	1096	Open in IMG/M
3300018432\|Ga0190275_11476648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	757	Open in IMG/M
3300018432\|Ga0190275_11619223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	725	Open in IMG/M
3300018839\|Ga0193606_1011967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2205	Open in IMG/M
3300018891\|Ga0193610_1080842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	855	Open in IMG/M
3300018892\|Ga0193607_1119613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	715	Open in IMG/M
3300018906\|Ga0193609_1051516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1270	Open in IMG/M
3300018910\|Ga0193598_1046022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1049	Open in IMG/M
3300018910\|Ga0193598_1058592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	912	Open in IMG/M
3300018916\|Ga0193615_1105057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	752	Open in IMG/M
3300018917\|Ga0193611_1021893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2124	Open in IMG/M
3300018920\|Ga0190273_10884987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	721	Open in IMG/M
3300018931\|Ga0193601_1186528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	538	Open in IMG/M
3300018939\|Ga0193593_1105419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	701	Open in IMG/M
3300018954\|Ga0193590_1150900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	585	Open in IMG/M
3300019142\|Ga0193597_1013524	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300019377\|Ga0190264_10268304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1006	Open in IMG/M
3300019767\|Ga0190267_10109798	Not Available	1118	Open in IMG/M
3300020181\|Ga0196958_10359858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	547	Open in IMG/M
3300028705\|Ga0307276_10045902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	954	Open in IMG/M
3300030496\|Ga0268240_10137827	Not Available	595	Open in IMG/M
3300031473\|Ga0272434_1261101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	799	Open in IMG/M
3300032159\|Ga0268251_10005665	All Organisms → cellular organisms → Bacteria	3351	Open in IMG/M
3300032159\|Ga0268251_10035970	Not Available	1561	Open in IMG/M
3300032159\|Ga0268251_10076880	Not Available	1148	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.16%
Host-Associated	Host-Associated	7.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.18%
Plants	Host-Associated → Plants	7.84%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Phylloplane	Host-Associated → Plants → Phylloplane	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.57%
Sand	Environmental → Terrestrial → Soil → Sand	17.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	70.59%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	17.65%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	57.84%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	15.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805011	Soil microbial communities from sample at Multiple FACE and OTC sites	Environmental	Open in IMG/M
2119805012	Soil microbial communities from sample at FACE Site NTS_067 Nevada Test Site	Environmental	Open in IMG/M
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018839	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018892	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, bundles v1	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018916	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, bundles v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018954	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS010_01580980	2119805011	Soil	MTRITAHVKGHYEATKTPWATDYVWVPGEEEVEGRLLNGVLRPWYAAYAEQVKEQRAHPEEQYRREMEAL
FNTS067_05549990	2119805012	Soil	MTRITAHVEGHYEAAKTSWATEYVWVPGEEEVEQRFLAGVLRPWHAAYAELVKEQRAHPEEQYRREMEAL
2209267959	2209111000	Soil	MTRIPAHVEGHYEATKTPWATDYVWVPGEEEVEGRLLNGVLRPWHAAYAERVEEQRAHPEEQYRREMEAL
LCrCPGB2aDRAFT_0057675	3300000095	Soil	VEGHYEATKTPWATDYVWVPGEEEVEQRLLDGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL*
LCrCPGB2aDRAFT_0496052	3300000095	Soil	TAHVEGHYEATKTPWATDYVWVPGEEEVEQRLLAGVLRPWHAAYAEQVKEQRAHPEGQYRREMEAL*
C688J35102_1209370484	3300002568	Soil	MPRERERLEMVATEAMTEKVHVGGHYEVIELPWATDYVWVSGDEEVERRLLDEVLRPWRAPYEEWEMEARAHPEERQRMEMESL*
Ga0058697_100385742	3300005562	Agave	MLATKKMTTKEHVPGHYKVTRVPFATDYVWVPEDEEVEGRLLNEVLHPWQAAYAEWAKEVRVHPEEQQRMEMEAL*
Ga0058697_100431403	3300005562	Agave	MLATKTMTTKEHVNGHYEVTKTPWATDYVWVPGEEEVEGCLLDEILHPWQAAYADWAEEERVHPEEQQRMEMESL*
Ga0058697_100630612	3300005562	Agave	MLTTKEHVNGHYEVTKTPWATDYVWVPDEEEVEGRLLNEVLHPWQAAYAEWVKEERVHPEEQLRMEMEVL*
Ga0105679_105504203	3300007790	Soil	MLNTMERVEGHYEVTKTAWATNYVWIPQEEEVEWCLLEEVLCPWRASYVEWVKEERAHPEEQTWIEMEALDGPNDAPEGGLEA*
Ga0126307_100411653	3300009789	Serpentine Soil	MLATKMMTTKEHVNGHYEVTQTPWATDYVWVPGEEEVEGRLLDEVLHPWQATYAEWVIEERAHPEEQARMEMETL*
Ga0126307_101091481	3300009789	Serpentine Soil	MLATKVMTPKEHVDGYYKVTETPWATDYVWVPAEQEVEGRLLDEVLHPWQAAYAEWVKQERIHPEEQARMEMEAL*
Ga0126307_101482922	3300009789	Serpentine Soil	MLATKMLATKEHVNGHYEVTQTPWATDYVWMPGEEEVEGCLLDEILHPWQATYAEWANEERVHPEEQQRMEMEAL*
Ga0126307_102875021	3300009789	Serpentine Soil	TTKEHVNGHYKVTKTPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAKEERVHPEEQQRVEIEAL*
Ga0126307_102960781	3300009789	Serpentine Soil	MLATKKMTTKEHVNGHYEITQTLWASDYVWVPGEEEVEGCLLDEVVHPWQATYAEWVKEERVHPEEQQRMEMEAL*
Ga0126307_103219993	3300009789	Serpentine Soil	VNGHYEVTKTPWATDYVWVPGEEEVEGRLLDEVLHPWHATYAEWVKEERVHPEEQLRMEMETL*
Ga0126307_105400181	3300009789	Serpentine Soil	KEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLQPWHAAYAEWANEKRVHPEEQQRMEMEAL*
Ga0126307_107536201	3300009789	Serpentine Soil	MLATKEHVSGHYTATKSPWATDYVWVPGAEEVERHLLDEVLHPWHEAYAEWTKEEQLHPEEQARMEMEAL*
Ga0126307_111030061	3300009789	Serpentine Soil	MLATKEHVNGHYQVTKTPWATDYVWVPGEEEVEGRLLNKVLHPWQATYAEWVKEERVHPEEQQRMEMEAL*
Ga0126307_111921341	3300009789	Serpentine Soil	VTPDLSGEFIWPYVSRERRRLKMLANKTRVDGHYEATKTPWATGYVWVPGEEEVEGRLLDEVLHPWHAAYAEWVIEERVHPEEQQQMEMEAL*
Ga0126307_115270171	3300009789	Serpentine Soil	MLATKEHVNGHYEVTKTPWATDYVWVPGEEEVEGRLLDEVLHPWQATYAEWAEEERVHPEEQLRMEMETL*
Ga0126313_100690761	3300009840	Serpentine Soil	MLATKMLATKEHVNGHYEVTQTPWATDYVWMPGEEEVEGCLLDEILHPWQATYAEWANEERVHPEEQLRMEMEAL*
Ga0126313_100971891	3300009840	Serpentine Soil	MLATKMMTTKEHVNGHYEVTHTPWATDYVWVPGEEEVEGRLLDEVLHPWHAAYAEWANEERVHPEEQQQMEMEAL*
Ga0126313_106598311	3300009840	Serpentine Soil	MLATKMMTTKEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLHPWHATYAEWANEKRVHPEEQQRMEMEAL*
Ga0126305_100744151	3300010036	Serpentine Soil	MLATKVMTTKEHVNGHYKVTKTPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAKEERVHPEEQQRVEIEAL*
Ga0126305_101043862	3300010036	Serpentine Soil	MLATKEHVNGHYKVTKTPWATDYVWVPGEEEVERRLLDEVLQPWHAAYAEWANEKRVHPEEQQRMEMEAL*
Ga0126305_101190293	3300010036	Serpentine Soil	MLATKEHVSGHYTATKSPWATDYVWVPGAEEVERHLLDEVLHPWHEAYAEWTKEEQLHPEGQVRMEMKTL*
Ga0126305_102412982	3300010036	Serpentine Soil	ATKMMTTKEHVNGHYEVTQTPWATDYVWVPGEEEVEGRLLDEVLHPWQATYAEWVIEERAHPEEQARMEMETL*
Ga0126305_103222123	3300010036	Serpentine Soil	MLVTKERIKGHYEVTKTLWATDYVWVPQEEVVERRRLEEVLCPWHASYAQWIKEERAHPEEQVRIEMEALDGPNEAPEGGLES*
Ga0126305_107139882	3300010036	Serpentine Soil	HYKVTQTPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAEEERAHPEEQQRMEMESL
Ga0126305_109082571	3300010036	Serpentine Soil	LSRESIWPYVSRERRRSKMLATKMMTTKEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLQPWHAAYAEWANEKRVHPEEQQRMEMEAL*
Ga0126305_111513171	3300010036	Serpentine Soil	TKVMTPKEHVDGYYKVTETPWATDYVWVPGDEEVEERLLDEVLHPWHAAYAEWLKEGRIHPEEQQRMEMEAL*
Ga0126305_111906721	3300010036	Serpentine Soil	MLATKEHVNGHYEVTKTPWATDYVWVPGEEEVEGRLLDEVLHPWHATYAEWVKEERVHPEEQLRMEMETL*
Ga0126304_100117039	3300010037	Serpentine Soil	MLVTKERIKGHYEVTKTLWATDYVWVPQEEVVERRRLEEVLCPWHASYAQWIKEERAHPEEQVRIEMEALDGPNVAPEGGLES*
Ga0126304_100693331	3300010037	Serpentine Soil	WATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAKEERVHPEEQQRVEIEAL*
Ga0126304_100899361	3300010037	Serpentine Soil	TPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAEEERAHPEEQQRMEMESL*
Ga0126304_101615902	3300010037	Serpentine Soil	MLSTKVMTTKEHVNGHYEATETPWATDYVWVPGDEEVDKRLLDEVLHPWHAAYAAWVKEERIHPEEQQRMELESL*
Ga0126304_103143622	3300010037	Serpentine Soil	MLATKEHVDGHYTVTNTPWATDYVWVPGEEEVEGRLHELLRPWRAAYAEWAKEEQLHPEEQVRMEMEIL*
Ga0126304_103825241	3300010037	Serpentine Soil	MLATKVMTPKEHVDGHYEVTQTPWATDYVWVPAEEEVEGRLLDEVLYPWHAAYAEWLK
Ga0126315_100319003	3300010038	Serpentine Soil	MSATKVRTAKEHVNGHYNVTQTPWATDYVWVPEDEEVEVRLLDEVLHPWHAAYTEWEKEERLHPEEQQRMEMEAL*
Ga0126315_102414491	3300010038	Serpentine Soil	MLATKEHVNGHYEVTQTPWATDYVWVPGEEEVEGRLLNEVLQPWHATYAEWVKKERVHPEEQQRMEMEAL*
Ga0126315_103608992	3300010038	Serpentine Soil	SKMLATKMMTTKEHVNGHYEVTHTPWATDYVWVPGEEEVEGRLLDEILHPWQATYAEWVKDERVHPEEQQRMEMEAL*
Ga0126315_109315581	3300010038	Serpentine Soil	LRVFKERRRLKMLATKEHVNGHYQVMKTPWATDYVWVPGEEEVEGRLLDEVLYPWHATYAEWAEEERVHPEEQQRMEMEAL*
Ga0126309_101159752	3300010039	Serpentine Soil	MTRITAHVEGHYEAAKTPWATEYVWVPGEEEVEGRLLNGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL*
Ga0126308_100152499	3300010040	Serpentine Soil	MLATKMMTTKEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLHPWHAAYAEWANEKRVHPEEQQRMEMEAL*
Ga0126308_104612331	3300010040	Serpentine Soil	GHYEVTKTLWATDYVWVPQEEVVERHRLEEVLCPWHASYAQWIKEERAHPEEQVRIEMEALDGPNVAPEGGLES*
Ga0126308_109180151	3300010040	Serpentine Soil	RSRMLLTKMMTTKEYVNGHYEVTHTPWATDYVWVPDEEEVEGRLLDEVLHPWHAAYAEWAKEERAHPEEQQRMEMESL*
Ga0126308_109207312	3300010040	Serpentine Soil	KMLATKEHVNGHYEVTQTPWATDYVWVPGAEEVEGRLLDEVLHPWHAPYAEWLKEERIHPEEQQRMEIESL*
Ga0126312_100561584	3300010041	Serpentine Soil	MLATKMLATKEHVNGHYEATQTPWATDYVWMPGEEEVEGCLLDEILHPWQATYAEWANEERVHPEEQLRMEMEAL*
Ga0126314_102008321	3300010042	Serpentine Soil	MLATKEHVNGHYQVTKTPWATDYVWVPGEEEVEGRLLDEVLYPWHATYAEWAEEERVHPEEQQRMEMEAL*
Ga0126314_102697912	3300010042	Serpentine Soil	MLATIEHVNGHYKVTQTPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWANEKRVHPEEQQRMEMESL*
Ga0126314_113136581	3300010042	Serpentine Soil	MLATKMMSTKEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLHPWHAAYAEWVKKERVHPEEQQRMEMEAL*
Ga0126314_113211151	3300010042	Serpentine Soil	TKMMTTKEHVNGHYEVTHTPWATDYVWVPGEEEVEGRLLDEVLHPWHAAYAEWANEERVHPEEQQQMEMEAL*
Ga0126310_100086889	3300010044	Serpentine Soil	MLATKMMSTKEHVNGHYEVTQTPWATDYVWVPGEEEVERRLLDEVLHPWHAAYAEWANEKRVHPEEQQRMEMEAL*
Ga0126310_100595972	3300010044	Serpentine Soil	MLATKEHVSGHYTATKTPWATDYVWVPGAEEVERRLLDEVLHPWHEAYAEWTKEEQLHPEEQARMEMEAL*
Ga0126310_101546401	3300010044	Serpentine Soil	MLATKEHVNGHCEVTKTPWATDYVWVPGEEEVEGRLLDEVLHPWQATYAEWAEEERVHPEEQQRMEM
Ga0126310_104769032	3300010044	Serpentine Soil	GHYQVTKTPWATDYVWVPGEEEVEGCFLDEVLYPWQATYAEWVKEERVHPEEQQRMEMETL*
Ga0126310_107368431	3300010044	Serpentine Soil	MGLRVFRERRRLKMLTTKEHVNGHYEVTKTPWATDYVWVPEGEEVEVRLFDEVLHPWHAAYAEWVKEERVHPEEQQQMEMEAL*
Ga0126311_100418391	3300010045	Serpentine Soil	MLTSKETSKEHVEGHYEVTETPWATDYAWVPGDEEVERRLLEEVLRPWHAAYAEWQKEVHRHPEEQARMEMEEL*
Ga0126311_105845891	3300010045	Serpentine Soil	MVSTKAMTAQKEKVGGHYEVTQMPWATDYAWVPGDEEVEQRLLEEVLRPWHAAYVEWQKEDHRHTEEQAQMEMESL*
Ga0126311_113064861	3300010045	Serpentine Soil	MLTTKEMTAKEHVGGHYKVTEMPWATDYVWVPGDEEVERRLLDQVLHPWRAPYAEWEKEGRAHPEEQQRMEMQSL*
Ga0126311_115648821	3300010045	Serpentine Soil	MGLRVFRERRRLKMLTTKEHVNGHYEVTKTPWATDYVWVPEGEEVEVRLFDEVLHPWHAAYAEWVKKERVHPEEQQRMEMEAL
Ga0126306_100066527	3300010166	Serpentine Soil	MLVNKERMNGHYEETETPWATDYVWVPGEEEVEGRLLDEVLHPWHAAYAEWVKEGRVHPEEQQRMEMEAL*
Ga0126306_100444262	3300010166	Serpentine Soil	MLANKTRVDGHYEATKTPWATDYVWVPGEEVVTKRQLHEVLHPWHAAYAEWVIEERAHPEEQQRMEMETL*
Ga0126306_100764412	3300010166	Serpentine Soil	MLDTKERVEGHYEVTKTLWATDYVWVPQEEEVERRLLEEVLHPWHASYAEWIKEERTHPEEQARIEMEALP*
Ga0126306_101555813	3300010166	Serpentine Soil	MTTKEHVNGHYKVTKTPWATDYVWVPEDEEVEGRLLDEVLHPWHAAYAEWAKEERVHPEEQQRVEIEAL*
Ga0126306_102234422	3300010166	Serpentine Soil	MLATKEHVSGHYEATETPWATDYVWVPGDEEVKERLLDEVLHPWHAAYAEWVKEERAHPEEQQRMEMEALS*
Ga0126306_103375941	3300010166	Serpentine Soil	MLVNKVHVDGHYEATKTPWATDYVWVPGEEVVNKRHLDEVLHPWHAAYAEWLKEERVHPEEQARMEMDAL*
Ga0126306_110998221	3300010166	Serpentine Soil	MLANKEHVNGHYEVTETSWATDYVWVPEVEEVEWCLLDEVLHPWHAAYAEWVIEERTHPEEQLRMEMEAL*
Ga0126317_100116901	3300011332	Soil	KGGKGNAMPRERERLEMVATKEITAKEHVGGHYEVTDMPWATDYVWVAGDEEVERRLLDEVLHPWRAPYAEWEKEERAHPEEQQRIEMESL*
Ga0150984_1112732551	3300012469	Avena Fatua Rhizosphere	GTREKGGKGNAMPRERERLEMVATKEITAKEHVGGHYEVTDMPWATDYVWVAGDEEVERRLLDEVLHPWRAPYAEWEKEERAHPEEQQRIEMESL*
Ga0182000_106178661	3300014487	Soil	MLATKVMIAKEHVNGHYEVTQTPWATDYVWVLGEEEVEGCLLDEVLHPWHAAYAEWVKEERTHSEEQLRMEMEALS*
Ga0182008_101346552	3300014497	Rhizosphere	MLTTKEHVNGHYEVTKTPWATDYVWVPADEEVEGRLLEEVLHPWHAAYAEWVKEERVHPEEQQQMEMEAL*
Ga0190275_100026297	3300018432	Soil	MLTTKETGKEHVEGHYEVTETPWATDYAWVPGGEEVERWRLGEVLRPWHAAFAEWQKEEHRHPEEQARMEMEGL
Ga0190275_100330233	3300018432	Soil	MLSTKETSKEHVGGHYEVTETLWATDYAWVAGDEEVEGRRLDGVLRPWRAAYAEWEKEERIHPEEQARMEMEALS
Ga0190275_100538646	3300018432	Soil	MLATKEHVNGHYTVTNTPWATDYVWVPGEEEVEAPLHEVLRPWRAAYAEWAKEEQLHPEEQVRMEMEIL
Ga0190275_106181403	3300018432	Soil	MLTTEITPAKERVGGHYEVTETPWATDYAWVPGEEEFERRLLEEVLRPWHAAYAEWAKVERAHPVELEAL
Ga0190275_106640023	3300018432	Soil	MMLATKVMTTKEHVDGHYKVTKTPWATDYVWVPGDEEVERRLLDKVLHPWHVAYAEWEKEERIHPEEQQRMEMEAL
Ga0190275_114766482	3300018432	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEQRFLAGVLHPWHAAYAEQVKEQRAHPEEQYRREMQAL
Ga0190275_116192231	3300018432	Soil	MMLATKVMTTKEHVDGHYKVTKTSWATDYVWVPGEEEVEKRLLDEVLHPWHAPYAAWAKEERIHPEEQQQMELEAL
Ga0193606_10119672	3300018839	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEQRLLAGVLHPWHAAYAEQAKEQRAHPEEQYRREMEAL
Ga0193610_10808422	3300018891	Soil	MTRITAHVEGHYEAAKTPWATEYVWVPGEEEVEGRLLAGVLRPWHAAYAARVKEQRAHPEEQYRREMEAL
Ga0193607_11196132	3300018892	Soil	MTRIIAHVEGHYEATRTPWATDYVWVPGEREVEGCLLNGVLRPWHAAYAEQVKEQRAHPEEQYRREMEAL
Ga0193609_10515162	3300018906	Soil	MTRIIAHVEGHHEPTKTPWATDYVWVPGEEEVEQRLLDGVLRPWHAAYAEQGKEQRAHPEEQYRREMEAL
Ga0193598_10460221	3300018910	Soil	MTRITAHVEGHHEATKTPWATDYVWVPGEEEVEQRLLDGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL
Ga0193598_10585921	3300018910	Soil	MTRVTAHVEGHYEATKTPWATDYVWVPGEEEVEQRLFDGVLRPWHAAYAARVKGQRAHPEEQYRREMEAL
Ga0193615_11050572	3300018916	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEGRLLDRVLRPWHAAYAEQVKEQRAHPEEQYRREMEAL
Ga0193611_10218931	3300018917	Soil	MTRIIAHVEGHYEATKTPWATDYVWVPGEEEVEQRLLDGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL
Ga0190273_108849872	3300018920	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEGRLLNGVLRPWSAAYAEQVKEQRAHPEEQYRREMEAL
Ga0193601_11865281	3300018931	Soil	ARVEGHYEATKTLWATDYVWVPGEEEVEGRLLDGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL
Ga0193593_11054192	3300018939	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEQRLHDGVLRPWHAAYAERVKEQRAHPEEQYRREMEAL
Ga0193590_11509001	3300018954	Soil	MTGITAHVEGHYEATKTPWATDYVWVPGEEEVEQRLLNGVLRPWHAAYAEQVKEQRAHPEEQYRREMEAL
Ga0193597_10135241	3300019142	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEGRLLNGVLRPWHAAYAEQVKEQRAHPEEQYRREMEAL
Ga0190264_102683043	3300019377	Soil	SMTRITAHVEGHYEATKTPWATDYVWVPGEEEVEQRLLAGVLHPWHAAYAEQVEEQRAHPEEQYRREMEAL
Ga0190267_101097982	3300019767	Soil	MLTTKETSKEHVEGHYEVTETPWATDYAWVPGDEEVELRLLEQVLRPWHAAYAEWQKEVHRHPEEQARMEMEGL
Ga0196958_103598581	3300020181	Soil	MTRITAHVEGHYEATKTPWATDYVWVPGEEEVEGRLLDGVLRPWHAAYAEQVEEQRAHPEEQYRREMEAL
Ga0307276_100459022	3300028705	Soil	MLANKVHVDGHYKATETPWATDYVWVPGDGEVEGRLLDEVLHPWQAAYAEWVREEQLHPEEQARMEMEIL
Ga0268240_101378272	3300030496	Soil	MLATKMMTTKEHVNGHYEVTHTPWATDYVWVPEVDEVEGRLLDEVLHPWHAAYAEWDKEERVHPEEQLRMEMEAL
Ga0272434_12611012	3300031473	Rock	MTRITAHVEGHYEATKTPWATDYVWVPGEDEVEQRFLAGVLRPWHAAYAEQVKEQRAHPEEQYRREMEAL
Ga0268251_100056651	3300032159	Agave	MLATKKMTTKEHVPGHYKVTRVPFATDYVWVPEDEEVEGRLLNEVLHPWQAAYAEWAKEVRVHPEEQQRMEMEAL
Ga0268251_100359703	3300032159	Agave	MLATKTMTTKEHVNGHYEVTKTPWATDYVWVPGEEEVEGCLLDEILHPWQAAYADWAEEERVHPEEQQRMEMESL
Ga0268251_100768801	3300032159	Agave	MLTTKEHVNGHYEVTKTPWATDYVWVPDEEEVEGRLLNEVLHPWQAAYAEWVKEERVHPEEQLRMEMEVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences