Metagenome Family F100344

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100344
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	54 residues
Representative Sequence	MANCAVIDSNNVVVNLIVAEPTDIPPEGCTLVEIPFCDIGYTWDGTRFNPPQAD
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.16 %
% of genes near scaffold ends (potentially truncated)	9.80 %
% of genes from short scaffolds (< 2000 bps)	57.84 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (29.412 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (73.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (79.412 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.61% Coil/Unstructured: 74.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01391	Collagen	7.84
PF07068	Gp23	2.94
PF10124	Mu-like_gpT	1.96
PF07460	NUMOD3	0.98
PF01555	N6_N4_Mtase	0.98
PF00959	Phage_lysozyme	0.98
PF13884	Peptidase_S74	0.98
PF12708	Pectate_lyase_3	0.98
PF00182	Glyco_hydro_19	0.98
PF11134	Phage_stabilise	0.98
PF01464	SLT	0.98
PF03420	Peptidase_S77	0.98
PF06147	DUF968	0.98
PF11351	GTA_holin_3TM	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.98
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.98
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.98
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.98
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.29 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	55.88 %
cellular organisms	root	All Organisms → cellular organisms	29.41 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	27.45 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	27.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.69 %
Unclassified	root	N/A	14.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	27.45 %
Unclassified	root	N/A	14.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	27.45 %
Unclassified	root	N/A	14.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.98 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.98 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	23.53 %
Unclassified	root	N/A	14.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.98 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.98 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.53 %
Unclassified	root	N/A	14.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
Methylophilaceae phage P19250A	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Methylophilaceae phage P19250A	0.98 %
unclassified Microgenomates group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group	0.98 %
Rhizorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Rhizorhabdus	0.98 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	28.43 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.53 %
Unclassified	root	N/A	14.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
Microgenomates group bacterium GW2011_GWC1_39_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium GW2011_GWC1_39_7	0.98 %
Polynucleobacter asymbioticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter asymbioticus	0.98 %
Rhizorhabdus histidinilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Rhizorhabdus → Rhizorhabdus histidinilytica	0.98 %
Methylophilaceae phage P19250A	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Methylophilaceae phage P19250A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c000010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	82414	Open in IMG/M
3300000203\|TB18AUG2009E_c036369	Not Available	509	Open in IMG/M
3300002092\|JGI24218J26658_1017269	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300002161\|JGI24766J26685_10023163	All Organisms → Viruses → Predicted Viral	1539	Open in IMG/M
3300002206\|metazooDRAFT_1328833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	870	Open in IMG/M
3300002930\|Water_100003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	68481	Open in IMG/M
3300002930\|Water_102514	All Organisms → cellular organisms → Bacteria → Proteobacteria	3141	Open in IMG/M
3300003375\|JGI26470J50227_1001091	All Organisms → cellular organisms → Bacteria → Proteobacteria	9959	Open in IMG/M
3300003430\|JGI25921J50272_10070432	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300003787\|Ga0007811_1002216	All Organisms → Viruses → Predicted Viral	2598	Open in IMG/M
3300003789\|Ga0007835_1005516	Not Available	1269	Open in IMG/M
3300003797\|Ga0007846_1005498	All Organisms → Viruses → Predicted Viral	1425	Open in IMG/M
3300003815\|Ga0007856_1010299	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625	Open in IMG/M
3300003852\|Ga0031655_10073888	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300004112\|Ga0065166_10016137	Not Available	2121	Open in IMG/M
3300004684\|Ga0065168_1018728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300004804\|Ga0007796_10034514	Not Available	1735	Open in IMG/M
3300005517\|Ga0070374_10149321	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300005581\|Ga0049081_10270818	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005662\|Ga0078894_10181421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1901	Open in IMG/M
3300006108\|Ga0007862_1016775	All Organisms → Viruses → Predicted Viral	1654	Open in IMG/M
3300006112\|Ga0007857_1000580	All Organisms → cellular organisms → Bacteria → Proteobacteria	10666	Open in IMG/M
3300006123\|Ga0007852_1001003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7684	Open in IMG/M
3300006127\|Ga0007805_1030444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium GW2011_GWC1_39_7	1227	Open in IMG/M
3300008113\|Ga0114346_1003488	Not Available	11706	Open in IMG/M
3300008261\|Ga0114336_1202208	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300008267\|Ga0114364_1025936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4376	Open in IMG/M
3300008267\|Ga0114364_1124509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	759	Open in IMG/M
3300009152\|Ga0114980_10483809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	706	Open in IMG/M
3300009154\|Ga0114963_10000958	All Organisms → cellular organisms → Bacteria → Proteobacteria	19783	Open in IMG/M
3300009154\|Ga0114963_10157695	All Organisms → Viruses → Predicted Viral	1342	Open in IMG/M
3300009155\|Ga0114968_10006972	All Organisms → cellular organisms → Bacteria → Proteobacteria	8299	Open in IMG/M
3300009159\|Ga0114978_10172101	All Organisms → Viruses → Predicted Viral	1383	Open in IMG/M
3300009159\|Ga0114978_10316496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952	Open in IMG/M
3300009182\|Ga0114959_10050000	All Organisms → Viruses → Predicted Viral	2431	Open in IMG/M
3300009182\|Ga0114959_10118856	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009183\|Ga0114974_10026565	All Organisms → cellular organisms → Bacteria	4037	Open in IMG/M
3300009183\|Ga0114974_10093898	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300009183\|Ga0114974_10096742	All Organisms → Viruses → Predicted Viral	1906	Open in IMG/M
3300009194\|Ga0114983_1098960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter asymbioticus	644	Open in IMG/M
3300010158\|Ga0114960_10494341	Not Available	588	Open in IMG/M
3300010354\|Ga0129333_10839668	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300010885\|Ga0133913_10542508	All Organisms → Viruses → Predicted Viral	3059	Open in IMG/M
3300010885\|Ga0133913_11006735	All Organisms → Viruses → Predicted Viral	2154	Open in IMG/M
3300010885\|Ga0133913_12345876	All Organisms → Viruses → Predicted Viral	1308	Open in IMG/M
3300012345\|Ga0157139_1003228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	846	Open in IMG/M
3300012665\|Ga0157210_1012290	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1480	Open in IMG/M
3300014502\|Ga0182021_13772616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503	Open in IMG/M
3300017747\|Ga0181352_1006879	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3784	Open in IMG/M
3300017747\|Ga0181352_1017306	All Organisms → Viruses → Predicted Viral	2260	Open in IMG/M
3300017754\|Ga0181344_1004312	All Organisms → cellular organisms → Bacteria	4863	Open in IMG/M
3300017754\|Ga0181344_1010171	Not Available	3030	Open in IMG/M
3300017754\|Ga0181344_1018305	All Organisms → Viruses → Predicted Viral	2187	Open in IMG/M
3300017754\|Ga0181344_1022310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Methylophilaceae phage P19250A	1958	Open in IMG/M
3300017754\|Ga0181344_1240394	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300017761\|Ga0181356_1015348	All Organisms → Viruses → Predicted Viral	2866	Open in IMG/M
3300017761\|Ga0181356_1080730	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300017774\|Ga0181358_1146301	Not Available	810	Open in IMG/M
3300017778\|Ga0181349_1256782	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300019093\|Ga0187843_10234398	Not Available	767	Open in IMG/M
3300019784\|Ga0181359_1000083	Not Available	18075	Open in IMG/M
3300019784\|Ga0181359_1016457	All Organisms → Viruses → Predicted Viral	2747	Open in IMG/M
3300019784\|Ga0181359_1025485	All Organisms → cellular organisms → Bacteria → Proteobacteria	2262	Open in IMG/M
3300020716\|Ga0214207_1004825	All Organisms → Viruses → Predicted Viral	2152	Open in IMG/M
3300021131\|Ga0214206_1000118	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21681	Open in IMG/M
3300021354\|Ga0194047_10023481	All Organisms → Viruses → Predicted Viral	3002	Open in IMG/M
3300021962\|Ga0222713_10600258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642	Open in IMG/M
3300025091\|Ga0209616_1006318	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1371	Open in IMG/M
3300025369\|Ga0208382_1002389	All Organisms → cellular organisms → Bacteria	4467	Open in IMG/M
3300025372\|Ga0207957_1016606	Not Available	927	Open in IMG/M
3300025379\|Ga0208738_1000476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10619	Open in IMG/M
3300025379\|Ga0208738_1004085	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300025379\|Ga0208738_1005334	All Organisms → Viruses → Predicted Viral	2393	Open in IMG/M
3300025382\|Ga0208256_1003469	All Organisms → Viruses → Predicted Viral	2839	Open in IMG/M
3300025470\|Ga0208389_1043001	Not Available	877	Open in IMG/M
3300027708\|Ga0209188_1000971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	24825	Open in IMG/M
3300027708\|Ga0209188_1114331	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300027708\|Ga0209188_1253895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	606	Open in IMG/M
3300027710\|Ga0209599_10006027	All Organisms → Viruses → Predicted Viral	4125	Open in IMG/M
3300027741\|Ga0209085_1015404	All Organisms → Viruses → Predicted Viral	3748	Open in IMG/M
3300027759\|Ga0209296_1030180	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300027759\|Ga0209296_1060753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1933	Open in IMG/M
3300027759\|Ga0209296_1117118	All Organisms → Viruses → Predicted Viral	1246	Open in IMG/M
3300027763\|Ga0209088_10002686	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10777	Open in IMG/M
3300027764\|Ga0209134_10202909	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	682	Open in IMG/M
3300027782\|Ga0209500_10097021	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300027782\|Ga0209500_10243971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	787	Open in IMG/M
3300027805\|Ga0209229_10030138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2375	Open in IMG/M
3300027896\|Ga0209777_10051010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3743	Open in IMG/M
3300027896\|Ga0209777_10169888	All Organisms → Viruses → Predicted Viral	1780	Open in IMG/M
3300027899\|Ga0209668_10453093	Not Available	846	Open in IMG/M
3300027963\|Ga0209400_1109376	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300028025\|Ga0247723_1006233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Rhizorhabdus → Rhizorhabdus histidinilytica	5244	Open in IMG/M
3300028025\|Ga0247723_1009622	All Organisms → Viruses → Predicted Viral	3851	Open in IMG/M
3300031759\|Ga0316219_1092356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300032092\|Ga0315905_11498419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300032753\|Ga0316224_1045659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1882	Open in IMG/M
3300034061\|Ga0334987_0019288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6157	Open in IMG/M
3300034061\|Ga0334987_0848401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503	Open in IMG/M
3300034062\|Ga0334995_0429332	Not Available	817	Open in IMG/M
3300034103\|Ga0335030_0416924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	867	Open in IMG/M
3300034104\|Ga0335031_0433366	Not Available	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.10%
Terrestrial	Environmental → Terrestrial	4.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.18%
Marine	Environmental → Aquatic → Marine	3.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.92%
Soil	Environmental → Terrestrial → Soil	0.98%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	50.98%
Lake	Environmental → Aquatic → Freshwater → Lake	36.27%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.92%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.96%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	39.22%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	36.27%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.92%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	25.49%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	16.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.92%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.96%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	1.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.96%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.96%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.98%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.98%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002206	Freshwater microbial communities from San Paulo Zoo lake, Brazil - OCT 2012	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012345	Freshwater microbial communities from Burnt River, Ontario, Canada - S22	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0000102	3300000176	Freshwater	MTTCAVINADGLVVNLIVAEPTDTPPEGCSLVLIPFCDIGYTWDGQQFNPPVSD*
TB18AUG2009E_0363692	3300000203	Freshwater	DGLVVNLIVAEPTDTPPEGCSLVLIPFCDIGYTWDGQQFNPPVSD*
JGI24218J26658_10172692	3300002092	Lentic	MSTPNCAVVDSTNTVVNIIVALPTDTPPEGCTLIPLYAAFIGSIWDGENFNPPAAV*
JGI24766J26685_100231631	3300002161	Freshwater And Sediment	MANCAVINHEGIVVNLIVAEPTDVPPEGCTLVEIPHCDIGYTWDGSRFNPPEAE*
metazooDRAFT_13288332	3300002206	Lake	MANCAVIDKDNIVVNIIVAEPTDTPPEGCFLIELPFCDIGYTWDGKRFNPPAGE*
Water_10000393	3300002930	Estuary Water	MSNCAVIDKNNVVIGIIVAEPTDVPPEGCMLVVVPFCDIGYVWDGKNFNPPVGS*
Water_1025142	3300002930	Estuary Water	MANCAVVDSNNVVVNIIVAEVTDPPPEGCALVEIPFCDIGYTWDGTQFNPPQA*
JGI26470J50227_10010913	3300003375	Freshwater	MANCAVIDSNNVVVNIIVAEPTDPPPAGCTLVLIPFCDIGYTWDGTNFNPPVGS*
JGI25921J50272_100704322	3300003430	Freshwater Lake	MKPCAVVDSNNVVINIIVADPTTDAPPEGCTLVEIPICNIGYTWDGTRFNAPQAE*
Ga0007811_10022162	3300003787	Freshwater	MANCAVIDSNNVVVNIIVAEPTDIPPEGCTLVEIPFCDIGYIWDGKTFKPQAN*
Ga0007835_10055162	3300003789	Freshwater	MANCAVIDSNNVVVNIIVAEVTDPPPEGCTLVLIPFCDIGYIWDGKNFNPPVGS*
Ga0007846_10054982	3300003797	Freshwater	MSNCAVVDANGVVVNIIVAEPTDVPPEGCTLVLLPFCDIGYTWDGKTFNPPVGS*
Ga0007856_10102992	3300003815	Freshwater	MTTPNCAVIDSTNTVVNIIVALPTDIPPPGCILMPLYFAQIGYTWDGTNFNEPINN*
Ga0031655_100738883	3300003852	Freshwater Lake Sediment	MSIPNCAVVDANGVVVNIIVALPTITPPEGCTLIPLYFADIGWLWDGTNFNAPQAE*
Ga0065166_100161372	3300004112	Freshwater Lake	MKPCAVVDSNNIVINIIVADPSTDTPPEGCTLVEIARCDIGYTWDGTRFNAPQAK*
Ga0065168_10187282	3300004684	Freshwater	MANCAVVDSKNVVVNIIVAEPTDVPPEGCILVEIPFCDIGYIWDGKTFKPQAN*
Ga0007796_100345142	3300004804	Freshwater	MIPNCAVVNADNVVVNIIVALPTDTPPAGCTLTPLYTCDIGWVWNGTNFNAPITE*
Ga0070374_101493212	3300005517	Freshwater Lake	MATCAVVDANGLVVNLIVAEPTDVPPAGYQLVLVPICDIGYIWDGTRFNPPQAD*
Ga0049081_102708182	3300005581	Freshwater Lentic	MANCAVVDSNNIVVNMIVAEPTDTPPEGCTLVEVPFCDIGYTWDGTRFNPPQAD*
Ga0078894_101814212	3300005662	Freshwater Lake	MKPCAVVDSNNLVINIIVADPTADTPPEGCTLVEIPICNIGYTWDGTRFNAPQAE*
Ga0007862_10167752	3300006108	Freshwater	MANCAVIDSNNVVVNIIVAEPTDIPPEGCTLVLIPFCDIGYTWDGTNFNPPVGS*
Ga0007857_10005801	3300006112	Freshwater	KAGENIMSNCAVVDANGVVVNIIVAEVTDPPPEGCTLVLIPFCDIGYIWDGKNFNPPVGS
Ga0007852_10010035	3300006123	Freshwater	MSNCAVVDANGVVVNIIVAEVTDPPPEGCTLVLIPFCDIGYIWDGKNFNPPVGS*
Ga0007805_10304442	3300006127	Freshwater	MANCAVVDSKNVVVNIIVAEPTDVPPEGCTLVLLPFCDIGYTWDGKTFNPPVGS*
Ga0114346_10034882	3300008113	Freshwater, Plankton	MSKCAVIQDGVLVNIIMAEVTDTPPEGCILVELPEYDIGYTWDGVRFNSPKAIE*
Ga0114336_12022082	3300008261	Freshwater, Plankton	MANCAVIDSNNVVINIIVAEVTDVPPEGCTLVAIPFCGIGYTWDGTNFIPPVGE*
Ga0114364_10259364	3300008267	Freshwater, Plankton	MTTCAVVDSNNIVVNIIVAEPTDIPPEGCILVGIPTCNIGYVWNGSTFVPPEVD*
Ga0114364_11245092	3300008267	Freshwater, Plankton	MSKCAVIQDGVLVNIIMAEVTDTPPEGCILIELPDYDIGYTWDGVRFNPPKAIE*
Ga0114980_104838092	3300009152	Freshwater Lake	MANCAVIKDNVVVNIIVAEVTDPPPEGCILVEIPFCDIGYTWDGVRFNPPQAD*
Ga0114963_1000095815	3300009154	Freshwater Lake	MSNCAVVNADGVVVNIIVAEPTDIPPEGCTLVLLPFCDIGYTWDGKNFKPQAD*
Ga0114963_101576952	3300009154	Freshwater Lake	MSNCAVVNADGVVVNIIVAEPTDIPPEGCTLVLLPFCDIGYTWDGKNFNPPQAN*
Ga0114968_100069728	3300009155	Freshwater Lake	MANCAVIQDGILVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPPKAIE*
Ga0114978_101721011	3300009159	Freshwater Lake	MANCAVIKDNVVVNTIVAEVTDPPPEGCTLVEIPFCDIGYTWDGVRFNPPQAD*
Ga0114978_103164962	3300009159	Freshwater Lake	MTVCAVIDSTNTVINLIVAEPTDVAPTGCTLVEVPQCEIGYTWDGTRFNPPVSE*
Ga0114959_100500002	3300009182	Freshwater Lake	MSNCAVVNDDGVVVNIIVAEPTDVPPEGCTLVLLPFCDIGYTWDGKQFNPPQAD*
Ga0114959_101188562	3300009182	Freshwater Lake	MSNCAVVDSNGLVVNIIVAETTDVPPEGCTLVLIPFCDIGYTWDGTNFNPPVDS*
Ga0114974_100265652	3300009183	Freshwater Lake	MANCAVVDSNNIVINLIVAEPTDTPPAGCTLVELPFCDIGYVWDGTRFNPPQAE*
Ga0114974_100938982	3300009183	Freshwater Lake	MANCAVIDSNNIVVNIIVAELTDPPPEGCTLVEIPFCDIGYTWDGVRFNPPQAQ*
Ga0114974_100967422	3300009183	Freshwater Lake	MANCAVIDSNNVVVNLIVAEPTDIPPEGCTLVEIPFCDIGYTWDGTRFNPPQAE*
Ga0114983_10989602	3300009194	Deep Subsurface	MANCAVIQDGVLVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPPKVIE*
Ga0114960_104943411	3300010158	Freshwater Lake	MSNCAVVNADGVVVNIIVAEPTDIPPEGCTLVLLPFCDIGYTWDGKQFNPPQAD*
Ga0129333_108396682	3300010354	Freshwater To Marine Saline Gradient	MANCAVVDSNGIVINLIVAEPTDTPPEGCTLVEIPFCDIGYTWDGTRFNPPQAE*
Ga0133913_105425083	3300010885	Freshwater Lake	MANCAVIQDGVLINIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPAKAIE*
Ga0133913_110067352	3300010885	Freshwater Lake	MANCAVIDKDNVVVNIIVAEPTDIPPEGCILVEIPFCDIGYIWDGKTFKPQAN*
Ga0133913_123458761	3300010885	Freshwater Lake	ILGCDCSRYTGIGDYMANCAVIDSNNVVVNLIVAEPTDIPPEGCTLVEIPFCDIGYTWDGTRFNPPQAE*
Ga0157139_10032282	3300012345	Freshwater	MANCAVIQDGVLVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPPEAIE*
Ga0157210_10122902	3300012665	Freshwater	MANCAVIQDGILVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVKFNPPKAIE*
Ga0182021_137726162	3300014502	Fen	MANCAVVDSNNIVVNLIVAEVTDTPPEGCTLVEIPFCDIGYTWDGTRFNPPQAD*
Ga0181352_10068793	3300017747	Freshwater Lake	MANCAVIDSNNVVVNLIVAEPTDTPPEGCTLVEIPFCDIGYIWDGTRFNPPQAD
Ga0181352_10173062	3300017747	Freshwater Lake	MANCAVVDSNNIVVNLIVAEPTDTPPEGCTLVEVPFCDIGYTWDGTRFNPPQAD
Ga0181344_10043124	3300017754	Freshwater Lake	MKPCAVVDSNNIVINIIVADPSTDTPPEGCTLVEIARCDIGYTWDGTRFNAPQAK
Ga0181344_10101712	3300017754	Freshwater Lake	MANCAVIDSNNVVVNLIVAEPTDTPPEGCTLVEVPFCDIGYTWDGTRFNPPQAD
Ga0181344_10183053	3300017754	Freshwater Lake	MAKCAVIQDGLVVNIIVADITDTPPEGCFLIELPFCDIGYTWDGVRFNPPKAIE
Ga0181344_10223102	3300017754	Freshwater Lake	MATCAVVDANGLVVNLIVAEPTDVPPAGYQLVLVPICDIGYTWDGTRFNPPQAD
Ga0181344_12403942	3300017754	Freshwater Lake	MKPCAVVDSNNVVINIIVADPSTDTPPEGCTLVEIARCDIGYTWDGTRFNAP
Ga0181356_10153482	3300017761	Freshwater Lake	LHKMSKCAVIQDGVLVNIIMAEVTDTPPEGCILIELPDYDIGYTWDGVRFNPPKAIE
Ga0181356_10807302	3300017761	Freshwater Lake	MANCAVIQNNIVVNIIVADVTDIPPEGCFLIELPFCDIGYTWDGVRFNPPKAIE
Ga0181358_11463012	3300017774	Freshwater Lake	MSKCAVIQDGVLVNIIMAEITDTPPEGCILVELPDYDIGYTWDGVRFNPPKAIE
Ga0181349_12567822	3300017778	Freshwater Lake	MANCAVIQDGVVVNIIVAKVTDTPPEGCILIEIPFCDIGYTWDGVRFNPPKAIE
Ga0187843_102343981	3300019093	Freshwater	MAKCAVIQDNIVVNIIVADITDTPPEGCFLIELPFCDIGYTWDGVRFNPPKAIE
Ga0181359_10000838	3300019784	Freshwater Lake	MAKCALIKDGVVINLIVAEVTDTPPKGCILVELPDYDVGYTWDGVRFHPPKDIE
Ga0181359_10164572	3300019784	Freshwater Lake	MATCAVVDANGLVVNLIVAEPTDVPPAGYQLVLVPICDIGYIWDGTRFNPPQAD
Ga0181359_10254856	3300019784	Freshwater Lake	MTTCAVINSDNVVVNLIVAEPTDTPPAGCTLVEVPFCDIGYTWDGTNFIPPVGE
Ga0214207_10048254	3300020716	Freshwater	MTTCAVINADGLVVNLIVAEPTDTPPEGCSLVLIPFCDIGYTWDGQQFNPPVSD
Ga0214206_100011836	3300021131	Freshwater	MANCAVIDKDNVVVNIIVAEPTDIPPEGCTLVEIPFCDIGYIWDGKTFKPQAN
Ga0194047_100234812	3300021354	Anoxic Zone Freshwater	MANCAVVDSNNIVVNLIVAEVTDTPPEGCTLIEIPFCDIGYTWDGTRFNPPQAE
Ga0222713_106002582	3300021962	Estuarine Water	MANCAVVDSNNIVVNMIVAEPTDTPPEGCTLVEIPFCDIGYIWDGTRFNPPQAQ
Ga0209616_10063183	3300025091	Freshwater	MANCAVIDSNNVVINIIVAEVTDVPPEGCTLVAIPFCGIGYTWDGTNFIPPVGE
Ga0208382_10023892	3300025369	Freshwater	MANCAVIDSNNVVVNIIVAEVTDPPPEGCTLVLIPFCDIGYIWDGKNFNPPVGS
Ga0207957_10166062	3300025372	Freshwater	MTTPNCAVIDSTNTVVNIIVALPTDIPPPGCILMPLYFAQIGYTWDGTNFNEPINN
Ga0208738_100047614	3300025379	Freshwater	MANCAVIDSNNVVVNIIVAEPTDIPPEGCTLVEIPFCDIGYIWDGKTFKPQAN
Ga0208738_10040852	3300025379	Freshwater	MSNCAVVDANGVVVNIIVAEPTDVPPEGCTLVLLPFCDIGYTWDGKTFNPPVGS
Ga0208738_10053342	3300025379	Freshwater	MANCAVVDSKNVVVNIIVAEPTDVPPEGCILVEIPFCDIGYIWDGKTFKPQAN
Ga0208256_10034692	3300025382	Freshwater	MANCAVIDSNNVVVNIIVAEPTDIPPEGCTLVLIPFCDIGYTWDGTNFNPPVGS
Ga0208389_10430012	3300025470	Freshwater	GGRMANCAVVDSKNVVVNIIVAEPTDVPPEGCILVEIPFCDIGYIWDGKTFKPQAN
Ga0209188_10009718	3300027708	Freshwater Lake	MSNCAVVNADGVVVNIIVAEPTDIPPEGCTLVLLPFCDIGYTWDGKNFNPPQAN
Ga0209188_11143312	3300027708	Freshwater Lake	MSNCAVVNDDGVVVNIIVAEPTDVPPEGCTLVLLPFCDIGYTWDGKQFNPPQAD
Ga0209188_12538952	3300027708	Freshwater Lake	MSNCAVVDSNGLVVNIIVAETTDVPPEGCTLVLIPFCDIGYTWDGTNFNPPVDS
Ga0209599_100060273	3300027710	Deep Subsurface	MANCAVIQDGVLVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPPKVIE
Ga0209085_10154042	3300027741	Freshwater Lake	MSNCAVVNADGVVVNIIVAEPTDIPPEGCTLVLLPFCDIGYTWDGKNFKPQAD
Ga0209296_10301802	3300027759	Freshwater Lake	MANCAVVDSNNIVINLIVAEPTDTPPAGCTLVELPFCDIGYVWDGTRFNPPQAE
Ga0209296_10607532	3300027759	Freshwater Lake	MANCAVIDSNNIVVNIIVAELTDPPPEGCTLVEIPFCDIGYTWDGVRFNPPQAQ
Ga0209296_11171182	3300027759	Freshwater Lake	YTGIGDYMANCAVIDSNNVVVNLIVAEPTDIPPEGCTLVEIPFCDIGYTWDGTRFNPPQA
Ga0209088_100026866	3300027763	Freshwater Lake	MANCAVIQDGVLINIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPAKAIE
Ga0209134_102029092	3300027764	Freshwater Lake	MANCAVVDSNNIVVNMIVAEPTDIPPEGCTLIEIPFCDIGYTWDGKRFNPPQAD
Ga0209500_100970212	3300027782	Freshwater Lake	MANCAVIKDNVVVNIIVAEVTDPPPEGCILVEIPFCDIGYTWDGVRFNPPQAD
Ga0209500_102439712	3300027782	Freshwater Lake	MTVCAVIDSTNTVINLIVAEPTDVAPTGCTLVEVPQCEIGYTWDGTRFNPPVSE
Ga0209229_100301382	3300027805	Freshwater And Sediment	MANCAVINHEGIVVNLIVAEPTDVPPEGCTLVEIPHCDIGYTWDGSRFNPPEAE
Ga0209777_100510103	3300027896	Freshwater Lake Sediment	MSTPNCAVVDSNNTVINIIVALPTDTPPEGCTLIPLYFADIGYTWDGTNFNAPQAE
Ga0209777_101698882	3300027896	Freshwater Lake Sediment	MSIPNCAVVDANGVVVNIIVALPTITPPEGCTLIPLYFADIGWLWDGTNFNAPQAE
Ga0209668_104530931	3300027899	Freshwater Lake Sediment	MATCAVVDANGLVVNLIVAEPTDVPPAGCQLVLVPFCDIGYTWDGTNFIPPQAD
Ga0209400_11093762	3300027963	Freshwater Lake	MANCAVIQDGILVNIIVAEVTDTPPEGCILVELPTYDIGYTWDGVRFNPPKAIE
Ga0247723_10062334	3300028025	Deep Subsurface Sediment	MANCAVIDSNNVVVNLIVAEPTDIPPEGCTLVEIPFCDIGYTWDGTRFNPPQAD
Ga0247723_10096223	3300028025	Deep Subsurface Sediment	MANCAVVDSNNIVVNMIVAEPTDTPPEGCTLVEVPFCDIGYTWDGTRFNPPQAD
Ga0316219_10923562	3300031759	Freshwater	MTTCAVIDSSNTVINIIIAEPTDIPPDGCTLVEIPVCNTGYIWDGQNFIPPENFTDNSTTGN
Ga0315905_114984191	3300032092	Freshwater	MSKCAVIQDGVLVNIIMAEVTDTPPEGCILVELPEYDIGYTWDGV
Ga0316224_10456592	3300032753	Freshwater	MANCAVIDANNVVVNIIVAEPTDTPPEGCTLVEIPFCDIGYIWDGKTFKPQVN
Ga0334987_0019288_3561_3725	3300034061	Freshwater	MANCAVVDSNNIVVNMIVAEPTDTPPEGCTLVEVPFCDIGYIWDGTRFNPPQAD
Ga0334987_0848401_43_207	3300034061	Freshwater	MANCAVIDSNNVVVNIIVAELTDPPPEGCTLVEIPFCDIGYTWDGVRFNPPQAE
Ga0334995_0429332_41_205	3300034062	Freshwater	MTNCAVIDANGVVVNIIVAEPTDTPPEGCTLVELPTYDIGYIWDGERFIPPQEQ
Ga0335030_0416924_411_578	3300034103	Freshwater	MKPCAVVDSNNVVINIIVADPSTDTPPEGCTLVEIARCDIGYTWDGTRFNAPQAE
Ga0335031_0433366_32_193	3300034104	Freshwater	MANCAVIKDNLVVNIIVAEVTDLPPEGCTLVEIPFCDIGYTWDGVRFNPPQAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100344

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences