Metagenome Family F100244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100244
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	69 residues
Representative Sequence	LYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (37.255 % of family members)
Environment Ontology (ENVO)	Unclassified (89.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (84.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.99% β-sheet: 14.49% Coil/Unstructured: 56.52%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01555	N6_N4_Mtase	36.27
PF03237	Terminase_6N	19.61
PF02195	ParBc	8.82
PF07508	Recombinase	2.94
PF05869	Dam	2.94
PF08281	Sigma70_r4_2	1.96
PF01844	HNH	1.96
PF13384	HTH_23	0.98
PF04860	Phage_portal	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	36.27
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	36.27
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	36.27
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	28.43 %
Viruses	superkingdom	All Organisms → Viruses	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.80 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.80 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.94 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.80 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.94 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.96 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.96 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.98 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	1.96 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.98 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
unclassified Agromyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1.96 %
Candidatus Frankia meridionalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	0.98 %
Mycolicibacterium wolinskyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium wolinskyi	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Agromyces sp. CFWR-12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. CFWR-12	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %
unclassified Hymenobacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter	1.96 %
Candidatus Frankia meridionalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	0.98 %
Mycolicibacterium wolinskyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium wolinskyi	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.63 %
Agromyces sp. CFWR-12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. CFWR-12	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.94 %
Hymenobacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1.96 %
Candidatus Frankia meridionalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	0.98 %
Mycolicibacterium wolinskyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium wolinskyi	0.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c009597	All Organisms → Viruses → Predicted Viral	1765	Open in IMG/M
3300000203\|TB18AUG2009E_c003062	Not Available	2632	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1044049	Not Available	1672	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10081221	All Organisms → Viruses → Predicted Viral	1719	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10114353	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10139082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300002092\|JGI24218J26658_1035607	Not Available	590	Open in IMG/M
3300002098\|JGI24219J26650_1033495	Not Available	618	Open in IMG/M
3300002098\|JGI24219J26650_1037747	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568	Open in IMG/M
3300002933\|G310J44882_10015004	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300002933\|G310J44882_10130692	Not Available	523	Open in IMG/M
3300003375\|JGI26470J50227_1009851	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300003375\|JGI26470J50227_1012452	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300003375\|JGI26470J50227_1014429	All Organisms → Viruses → Predicted Viral	1872	Open in IMG/M
3300003375\|JGI26470J50227_1080630	Not Available	502	Open in IMG/M
3300003787\|Ga0007811_1002829	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300003797\|Ga0007846_1002422	All Organisms → Viruses → Predicted Viral	2492	Open in IMG/M
3300003804\|Ga0007817_1009123	Not Available	682	Open in IMG/M
3300003806\|Ga0007864_1005997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1015	Open in IMG/M
3300003809\|Ga0007869_1009621	Not Available	960	Open in IMG/M
3300003812\|Ga0007861_1010570	Not Available	843	Open in IMG/M
3300003813\|Ga0007879_1028672	Not Available	545	Open in IMG/M
3300003814\|Ga0007877_1007187	All Organisms → Viruses → Predicted Viral	1472	Open in IMG/M
3300004684\|Ga0065168_1035920	Not Available	780	Open in IMG/M
3300004770\|Ga0007804_1131590	Not Available	630	Open in IMG/M
3300004770\|Ga0007804_1133765	Not Available	624	Open in IMG/M
3300004770\|Ga0007804_1156564	Not Available	570	Open in IMG/M
3300004807\|Ga0007809_10027131	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300006072\|Ga0007881_1134149	Not Available	608	Open in IMG/M
3300006100\|Ga0007806_1039062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium wolinskyi	931	Open in IMG/M
3300006101\|Ga0007810_1047792	Not Available	891	Open in IMG/M
3300006105\|Ga0007819_1063033	Not Available	775	Open in IMG/M
3300006119\|Ga0007866_1055864	Not Available	744	Open in IMG/M
3300006121\|Ga0007824_1105172	Not Available	530	Open in IMG/M
3300006127\|Ga0007805_1022810	All Organisms → Viruses → Predicted Viral	1453	Open in IMG/M
3300006128\|Ga0007828_1077714	Not Available	688	Open in IMG/M
3300009175\|Ga0073936_10587203	Not Available	637	Open in IMG/M
3300013093\|Ga0164296_1318386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300013094\|Ga0164297_10065256	All Organisms → Viruses → Predicted Viral	1674	Open in IMG/M
3300013094\|Ga0164297_10125166	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1054	Open in IMG/M
3300013094\|Ga0164297_10344981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300013094\|Ga0164297_10430422	Not Available	506	Open in IMG/M
3300020688\|Ga0214239_109057	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300020700\|Ga0214225_1006226	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300020704\|Ga0214250_1027939	Not Available	693	Open in IMG/M
3300020706\|Ga0214217_1000464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	10507	Open in IMG/M
3300020711\|Ga0214237_1004502	Not Available	2245	Open in IMG/M
3300020711\|Ga0214237_1004777	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300020721\|Ga0214236_1012156	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300020722\|Ga0214245_1007586	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300020722\|Ga0214245_1010535	Not Available	1347	Open in IMG/M
3300020726\|Ga0214220_1006335	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300020727\|Ga0214246_1010285	All Organisms → Viruses → Predicted Viral	1733	Open in IMG/M
3300020733\|Ga0214172_1027252	Not Available	885	Open in IMG/M
3300020735\|Ga0214219_1008376	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300020735\|Ga0214219_1033520	Not Available	784	Open in IMG/M
3300021115\|Ga0214174_116160	Not Available	606	Open in IMG/M
3300021121\|Ga0214173_102493	All Organisms → Viruses → Predicted Viral	2262	Open in IMG/M
3300021124\|Ga0214199_1014463	Not Available	899	Open in IMG/M
3300021127\|Ga0214193_1041619	Not Available	510	Open in IMG/M
3300021130\|Ga0214180_1000750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11005	Open in IMG/M
3300021136\|Ga0214167_1012705	All Organisms → Viruses → Predicted Viral	2272	Open in IMG/M
3300021136\|Ga0214167_1035855	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300021137\|Ga0214165_1021601	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300021138\|Ga0214164_1017452	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300021139\|Ga0214166_1018865	All Organisms → Viruses → Predicted Viral	1772	Open in IMG/M
3300021139\|Ga0214166_1066997	Not Available	749	Open in IMG/M
3300021139\|Ga0214166_1074483	Not Available	697	Open in IMG/M
3300021142\|Ga0214192_1023363	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300021354\|Ga0194047_10261834	Not Available	669	Open in IMG/M
3300025357\|Ga0208383_1019562	Not Available	811	Open in IMG/M
3300025381\|Ga0208871_1005090	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300025381\|Ga0208871_1038896	Not Available	658	Open in IMG/M
3300025382\|Ga0208256_1041641	Not Available	643	Open in IMG/M
3300025389\|Ga0208257_1033428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. CFWR-12	753	Open in IMG/M
3300025391\|Ga0208740_1007680	All Organisms → Viruses → Predicted Viral	1834	Open in IMG/M
3300025391\|Ga0208740_1021787	Not Available	969	Open in IMG/M
3300025391\|Ga0208740_1028145	Not Available	826	Open in IMG/M
3300025400\|Ga0208387_1015714	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300025400\|Ga0208387_1073177	Not Available	506	Open in IMG/M
3300025401\|Ga0207955_1004688	All Organisms → Viruses → Predicted Viral	3071	Open in IMG/M
3300025401\|Ga0207955_1012019	All Organisms → Viruses → Predicted Viral	1719	Open in IMG/M
3300025407\|Ga0208378_1080201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300025430\|Ga0208622_1063868	Not Available	636	Open in IMG/M
3300025723\|Ga0208741_10096012	Not Available	673	Open in IMG/M
3300025783\|Ga0208258_1041451	Not Available	654	Open in IMG/M
3300027896\|Ga0209777_10922779	Not Available	603	Open in IMG/M
3300031759\|Ga0316219_1084634	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1234	Open in IMG/M
3300031759\|Ga0316219_1183800	Not Available	757	Open in IMG/M
3300031813\|Ga0316217_10261833	Not Available	683	Open in IMG/M
3300032117\|Ga0316218_1204099	Not Available	706	Open in IMG/M
3300032562\|Ga0316226_1237843	Not Available	733	Open in IMG/M
3300032579\|Ga0316228_1057171	All Organisms → Viruses → Predicted Viral	1523	Open in IMG/M
3300032605\|Ga0316232_1095836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. CFWR-12	1342	Open in IMG/M
3300032665\|Ga0316221_1101502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1053	Open in IMG/M
3300032668\|Ga0316230_1202339	Not Available	702	Open in IMG/M
3300032668\|Ga0316230_1206742	Not Available	691	Open in IMG/M
3300032675\|Ga0316225_1063807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → unclassified Agromyces → Agromyces sp. CFWR-12	1323	Open in IMG/M
3300032676\|Ga0316229_1027957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2809	Open in IMG/M
3300032677\|Ga0316227_1031781	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300032722\|Ga0316231_1324443	Not Available	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	93.14%
Lake	Environmental → Aquatic → Freshwater → Lake	6.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	40.20%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	35.29%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.73%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.86%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	37.25%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	35.29%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.73%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	2.94%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.98%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300020688	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020700	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 hypolimnion	Environmental	Open in IMG/M
3300020704	Freshwater microbial communities from Trout Bog Lake, WI - 29JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020706	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020711	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020721	Freshwater microbial communities from Trout Bog Lake, WI - 28JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020722	Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021124	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021130	Freshwater microbial communities from Trout Bog Lake, WI - 16OCT2007 epilimnion	Environmental	Open in IMG/M
3300021136	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0095973	3300000176	Freshwater	RKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
TB18AUG2009E_0030624	3300000203	Freshwater	TSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
TBL_comb48_EPIDRAFT_10440493	3300000439	Freshwater	LEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
TBL_comb47_HYPODRAFT_100812211	3300000553	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGISYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
TBL_comb47_HYPODRAFT_101143531	3300000553	Freshwater	ELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
TBL_comb47_HYPODRAFT_101390822	3300000553	Freshwater	IEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
JGI24218J26658_10356072	3300002092	Lentic	NSGALEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
JGI24219J26650_10334952	3300002098	Lentic	EITSNSGALEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
JGI24219J26650_10377471	3300002098	Lentic	ELLAIEHGHLYEITSNSGALEARKDHEGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRAPFLVIGL*
G310J44882_100150043	3300002933	Freshwater	SGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI*
G310J44882_101306921	3300002933	Freshwater	DWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
JGI26470J50227_10098515	3300003375	Freshwater	YEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
JGI26470J50227_10124521	3300003375	Freshwater	LYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI*
JGI26470J50227_10144294	3300003375	Freshwater	PLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
JGI26470J50227_10806301	3300003375	Freshwater	LEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
Ga0007811_10028295	3300003787	Freshwater	HGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
Ga0007846_10024223	3300003797	Freshwater	LAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007817_10091231	3300003804	Freshwater	DDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007864_10059971	3300003806	Freshwater	GHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0007869_10096212	3300003809	Freshwater	EARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007861_10105702	3300003812	Freshwater	KDDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAASALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007879_10286722	3300003813	Freshwater	ARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0007877_10071871	3300003814	Freshwater	LLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0065168_10359202	3300004684	Freshwater	DLKDDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007804_11315901	3300004770	Freshwater	TSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007804_11337651	3300004770	Freshwater	YEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007804_11565642	3300004770	Freshwater	ITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007809_100271311	3300004807	Freshwater	SNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007881_11341491	3300006072	Freshwater	ELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
Ga0007806_10390622	3300006100	Freshwater	EHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007810_10477921	3300006101	Freshwater	GPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007819_10630331	3300006105	Freshwater	EITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0007866_10558642	3300006119	Freshwater	EARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0007824_11051721	3300006121	Freshwater	IEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAASALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0007805_10228101	3300006127	Freshwater	ARRDSDGYCYGAIGSGAAPALGSLYTDHEDEGSLYQALEAAAMHTTNVRSPFLVIYL*
Ga0007828_10777141	3300006128	Freshwater	WELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0073936_105872031	3300009175	Freshwater Lake Hypolimnion	AIEHGHLYEITSNSGALEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0164296_13183861	3300013093	Freshwater	EITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0164297_100652562	3300013094	Freshwater	HLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0164297_101251662	3300013094	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL*
Ga0164297_103449811	3300013094	Freshwater	NSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL*
Ga0164297_104304221	3300013094	Freshwater	GPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL*
Ga0214239_1090573	3300020688	Freshwater	KDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214225_10062261	3300020700	Freshwater	IEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214250_10279391	3300020704	Freshwater	HLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214217_10004641	3300020706	Freshwater	RKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214237_10045021	3300020711	Freshwater	TSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214237_10047771	3300020711	Freshwater	EITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214236_10121561	3300020721	Freshwater	LEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214245_10075861	3300020722	Freshwater	ELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214245_10105351	3300020722	Freshwater	GHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214220_10063353	3300020726	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214246_10102851	3300020727	Freshwater	PLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214172_10272522	3300020733	Freshwater	LYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214219_10083763	3300020735	Freshwater	GPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLS
Ga0214219_10335201	3300020735	Freshwater	ELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214174_1161602	3300021115	Freshwater	ARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214173_1024933	3300021121	Freshwater	DDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214199_10144632	3300021124	Freshwater	YEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214193_10416192	3300021127	Freshwater	IEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0214180_100075011	3300021130	Freshwater	YEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214167_10127051	3300021136	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214167_10358553	3300021136	Freshwater	HLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214165_10216011	3300021137	Freshwater	KDDGELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214164_10174521	3300021138	Freshwater	NSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0214166_10188651	3300021139	Freshwater	LLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214166_10669971	3300021139	Freshwater	LEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0214166_10744831	3300021139	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0214192_10233631	3300021142	Freshwater	GHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSI
Ga0194047_102618342	3300021354	Anoxic Zone Freshwater	DWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208383_10195621	3300025357	Freshwater	WELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208871_10050901	3300025381	Freshwater	DWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0208871_10388961	3300025381	Freshwater	LLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208256_10416412	3300025382	Freshwater	INSDRGMIEARKDSDGYCYGAVGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208257_10334282	3300025389	Freshwater	ARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208740_10076802	3300025391	Freshwater	DDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208740_10217872	3300025391	Freshwater	TSNSGALEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208740_10281451	3300025391	Freshwater	RKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208387_10157142	3300025400	Freshwater	SGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208387_10731771	3300025400	Freshwater	IEHGHLYEITSNSGALEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0207955_10046881	3300025401	Freshwater	EITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0207955_10120192	3300025401	Freshwater	LEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208378_10802012	3300025407	Freshwater	KKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0208622_10638681	3300025430	Freshwater	EHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208741_100960121	3300025723	Freshwater	NSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0208258_10414512	3300025783	Freshwater	ELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0209777_109227792	3300027896	Freshwater Lake Sediment	GHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0316219_10846341	3300031759	Freshwater	SNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0316219_11838002	3300031759	Freshwater	AIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316217_102618332	3300031813	Freshwater	LKDDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0316218_11820851	3300032117	Freshwater	KDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0316218_12040992	3300032117	Freshwater	EARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316226_12378432	3300032562	Freshwater	EITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316228_10571711	3300032579	Freshwater	WELLAIEHGHLYEITSNSGPLEARKDHDGISYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0316232_10958361	3300032605	Freshwater	HGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0316221_11015022	3300032665	Freshwater	ITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVLSL
Ga0316230_12023392	3300032668	Freshwater	ARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316230_12067422	3300032668	Freshwater	KDDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0316225_10638073	3300032675	Freshwater	DWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVIGL
Ga0316229_10279571	3300032676	Freshwater	YEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316227_10317815	3300032677	Freshwater	EHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL
Ga0316231_13244431	3300032722	Freshwater	KDDWELLAIEHGHLYEITSNSGPLEARKDHDGIAYGAIGSGAAPALGSLFTDHEDEGSLYQALEASAMHTTNVRSPFLVISL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences