Basic Information | |
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Family ID | F100226 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 58 residues |
Representative Sequence | MEHDENAFISDVDGTVGHDEGPVDADPEETTLNPYILARNMRVAQLKQRLAEVEGSAQEL |
Number of Associated Samples | 12 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 88.24 % |
% of genes near scaffold ends (potentially truncated) | 10.78 % |
% of genes from short scaffolds (< 2000 bps) | 68.63 % |
Associated GOLD sequencing projects | 9 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.37 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (83.333 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated (96.078 % of family members) |
Environment Ontology (ENVO) | Unclassified (98.039 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant corpus (96.078 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 28.41% β-sheet: 0.00% Coil/Unstructured: 71.59% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.37 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Peatland Fen Bog Host-Associated |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0116229_100098081 | 3300009500 | Host-Associated | MEHDKNAVISDANGTMGHDEGTVDADPKETMPNPYILARNMRVARFKQ* |
Ga0116229_100139959 | 3300009500 | Host-Associated | MEHDKNAVISDVDGTVGHDEGKVDANPKETMPNPYILTRNMRVAQLKQRLAEVEGSAQEL |
Ga0116229_100737565 | 3300009500 | Host-Associated | MEHDENEVIGDADGTMGDDERTMDVDPEETAPKPYIVARNMRIAQLKQRFAEVERSA* |
Ga0116229_101078002 | 3300009500 | Host-Associated | MEHDENAVISDDDGTVGHDEAAMDADPIETTPNPYVLAHNMRVT* |
Ga0116229_101160232 | 3300009500 | Host-Associated | MEHDENAVIGDVDGTVDADPKKIMPNPYILARNMRVAQLKQRLAEVEGSAQEL* |
Ga0116229_102018451 | 3300009500 | Host-Associated | MEHDENEVIGDVDGTMGDDEGTVDVDPEETTPNPYILTCNMRVAQLKQ* |
Ga0116229_102134922 | 3300009500 | Host-Associated | MNKVQMEHDENAVISDVDGTVGHDEGIVDADPKETMPNPYILARNMRVAQFKQRLAEVEGSAHEL* |
Ga0116229_105130541 | 3300009500 | Host-Associated | MEHDENAVISDVNGIVGHDEGTMDVDPQETMPNPYILACNMRVVQSKQ* |
Ga0116229_105139561 | 3300009500 | Host-Associated | MEHDENAVISDVDGTVGHDEGTVDVDPQETMPNPYILACNMRVAQSKQ* |
Ga0116229_105524751 | 3300009500 | Host-Associated | MEHDENEVIDDADGTMGDDEGTVDVDPEETTPNPYILARNMRVAQLKQRLAEVEGSAQE |
Ga0116229_105642421 | 3300009500 | Host-Associated | MNKVQMEHDENAIISDVDGTVGHDEGIVDVDPKETMPNPYILARNMRVAQFKQRLTEDEGSAQEL* |
Ga0116230_1000162213 | 3300009510 | Host-Associated | MEHDKNVVINDDDGTMGHDEAAVDTNPKEITSNRYILAHNMRIAQLKQRLAEVEGIAQEL |
Ga0116230_100972404 | 3300009510 | Host-Associated | MEHDENVVISDADGIVGHDEGPVDADPEETTLNPYILTHNMRVAQLKQRLAEIEGSAQEL |
Ga0116230_103255422 | 3300009510 | Host-Associated | MEHDENAIIGHDDGTVGHDEATVDADPKETTPNPYILTCNMRIAQLKQ* |
Ga0116230_103688462 | 3300009510 | Host-Associated | MEHDENVVINDDNGIVGHNEAAVDVDPKETTPNPYVLTHNMCNVQLKQRFAEVEGSTQEL |
Ga0116230_106621061 | 3300009510 | Host-Associated | QLTFLRQDQHKASCLSKVQMERDENAVISDADGIVGHDEGTMDADPEETTLNPCILARNKRVAQLKQRFAEVEGSAQEL* |
Ga0116230_106922681 | 3300009510 | Host-Associated | QDQHKASCLSKVQMERDENAVISDVDGTVGHDEGTLDADPEETTLNPYILARNRRVAQLKQRLAKVEGSAQEL* |
Ga0116230_107813841 | 3300009510 | Host-Associated | MEHDENAVISDVDGTVGHDEGPVDADPEETTLNPYILARSIRVAEFKQRLTEVEGSAQEL |
Ga0116230_109654111 | 3300009510 | Host-Associated | VGHDEGPVDADPEETTLNPYILARNMHVAQLKQRLAEVEGSAQEL* |
Ga0116230_112904861 | 3300009510 | Host-Associated | LSKVQTKRDENAVISDVDGTVGHDEGTVDADPEETTLNPYILARNRHVAQLKRLVEVEGSAQEL* |
Ga0116109_10867511 | 3300009627 | Peatland | DADGTVGHDEGPVDADPEETTLNPYILARNMRVVELKQRLAEVEGSAQEL* |
Ga0116231_1000011193 | 3300009697 | Host-Associated | MEHDENEVIGDADGTMGDDERTMDVDPEETTPKPYIVARNMRIAQLKQRFAKVERSA* |
Ga0116231_1000849114 | 3300009697 | Host-Associated | MEHDKNAVISDVDGTVGHDEGKVDANPKETMPNPYILTCNMRVAQLKQRLAEVEGSAQEL |
Ga0116228_101184402 | 3300009701 | Host-Associated | MEHDKNVVINDDDGTMGHDEAAVDTNPKEITSNRHILAHNMRVAQLKQRLAEVEGIAQEL |
Ga0116228_103307441 | 3300009701 | Host-Associated | MERDENVVISDANGTVGHDEGTVDADPEETTLNPYILARNKRVAQLKQRLAEVEGSAQEL |
Ga0116228_105200921 | 3300009701 | Host-Associated | FLRQDQHKASCLSKVQMEHDENAFISDADGTVGHDEGPVDVDPEETTLNPYILARNMRVA |
Ga0116228_105375901 | 3300009701 | Host-Associated | MEHDENAVISDADGTMGHDEGLVDADLEETTLNPYILACNMRVAQLKQQLAEVEGSAQEL |
Ga0116228_108558861 | 3300009701 | Host-Associated | MEHDENAVISDADGTVGHNEGHVDADPEETTPNPYILAHNMRVAELKQRLAEVEGSAQEL |
Ga0116228_110412951 | 3300009701 | Host-Associated | MERDENAIISDADGTVGHDEGTVDADPEETTLNPYILTRNRHVAQLKQRLAEVEGSAQEL |
Ga0116227_1000910714 | 3300009709 | Host-Associated | MEHDENEVIGDADGTMGDDERTMDVDPEETTPKPYIVARNMRIAQLKQRFAEVERSA* |
Ga0116227_100465184 | 3300009709 | Host-Associated | MEHDENEVIGDVDGTMGDDEGTVDVDPEETTPNPYILACNMRVAQLKQ* |
Ga0116227_101313132 | 3300009709 | Host-Associated | MNKVQIMEHDENAVISDANGTVGHDEGIVDVNPKETMPNPDILARNMRVAQLKH* |
Ga0116227_101442261 | 3300009709 | Host-Associated | MLIPKKQCPTLTFISDVDGTVGHDEGIVDVDPKETMPNPYILARNMRVAQFKQRLTEDEGSAQEL* |
Ga0116227_102149482 | 3300009709 | Host-Associated | MEHDKNEVIGDVDGIVGDDEGTMDVDPKETTLNPYILAHDMCIAQLKQRLAEVERSAQEL |
Ga0116226_100651474 | 3300009787 | Host-Associated | FLRQDQHKASCLSKVQMEHDENAVISDVGGTVGHDEGTVDADPKETMPNPYILACNMRVAQLKRLAEVERNAQEL* |
Ga0116226_101026015 | 3300009787 | Host-Associated | MEHDENVIINDDDGTMGHDEAIVDADLKETTPNPYVLTCNMCVAQLKQRLTKVEGSAQEL |
Ga0116226_101838451 | 3300009787 | Host-Associated | MERDENAVINDVDGTMGHDEGTVDADPEETMLNPYILARNRRVAQLKQRFAEVEGSAQEL |
Ga0116226_102277811 | 3300009787 | Host-Associated | MEHDENAVISDVDGTVGHNEGIVDANPKETMPNPYILARNMHVAQLKQRLTKIEGSTQEL |
Ga0116226_102824661 | 3300009787 | Host-Associated | MEHDENVVISDDDGTVDHDETIVDVDPKETTPNPYVLARNMRVAQLKQRLAEVEGSAQEL |
Ga0116226_102829952 | 3300009787 | Host-Associated | MEHDENVIISDDDGTMGHDEAVVDADLKETTPNPYVLACNMRVAQLKQRLTKVEGSAQEF |
Ga0116226_104071822 | 3300009787 | Host-Associated | MERDENAVISDANGTVGHDEGTVDVDPEETTLNPYVLARNRRVAQLKQRLAEVEGSAQEL |
Ga0116226_105582191 | 3300009787 | Host-Associated | MEHDENAIINDDNGIVGHDEAVVDVDPKETTPNPYVLTLNMCNVQLKQRLVEVEGSTQEL |
Ga0116226_106398052 | 3300009787 | Host-Associated | MEHDENAVISDVDGTVGHDEGPVDADPKETTLNPYILPCNMRVAQLKQLAEVEGSAQEL* |
Ga0116226_106626721 | 3300009787 | Host-Associated | MEHDENAFINDADGTVGHDEGPVDADPEETTLNPYILACNMRVVQLKQ* |
Ga0116226_108746742 | 3300009787 | Host-Associated | MEHDENAVISDANGIVGHDEGLVDVDLKETTLNPYILARNMRVAQLKQRLAEVEGSAQEL |
Ga0116226_109609792 | 3300009787 | Host-Associated | MERDENAVISDADGTVGHDEGTVDADSEETTLNPYILARNSRVAQLKQRLAEVEGSAQEL |
Ga0116226_109697871 | 3300009787 | Host-Associated | MECDENAIISDSDGTVGHDEGTVDADPEETTLKPYILARNKRVAQLKQRLTEVEGSAQEL |
Ga0116226_109853632 | 3300009787 | Host-Associated | MERDENAVISDADGTVGHDEGTMDVDPEETTLNPYILARNKRVAQLKQRLAEVEGSAQEL |
Ga0116226_110196551 | 3300009787 | Host-Associated | MDHDKNAVISDADGTVGHNEGTMDADPKETMPNPYILARNMCVAQLKQRLAEVEGSAQEL |
Ga0116226_110992831 | 3300009787 | Host-Associated | MERDENAVISDADGTVGHDEGTVDVDPEETTLNPYILARNRCVAQLKQRLAEVEGSAQEL |
Ga0116226_111127931 | 3300009787 | Host-Associated | MEHDENAIISDADGIVGHNEGTVDVDPEETTLNPYILARNRRVAQLKQRLAEVEGSAQEL |
Ga0116226_114071451 | 3300009787 | Host-Associated | DNGIVGHDEAVVDVDPKETTPNPYVLTHNMCNVQLKQRFAEVEGSTQEL* |
Ga0116226_114489581 | 3300009787 | Host-Associated | MERDENAIISDADGTMGHDEGTVDADPEETINPYILARNRRVAQLKQRLAEVEGSAQEL* |
Ga0116226_114567851 | 3300009787 | Host-Associated | QDQQKAICLSKVQMEHDENAVINDDDGTVGHDEAVVDANPKETTPNRYILAYNMRIAQLKQRLAEVEGIAQEL* |
Ga0116226_114815491 | 3300009787 | Host-Associated | MECDENTVISDADGTVGHDEGTVDVDPEETTLNPYILARNWRVAKLKQRLAKVEGSAQEL |
Ga0116226_115464091 | 3300009787 | Host-Associated | MERDENAVISDADGTVGHDEGTVDADPEETSLNPYILARNRRVAQLKQRLVEVEGSAQEL |
Ga0116226_115511841 | 3300009787 | Host-Associated | MEHDENAFISDADGTVGHDEGPMDANPEETTLNPYILTRNMRVAQLKQRLAEVEGSAQEL |
Ga0116226_115596751 | 3300009787 | Host-Associated | MERDENAVISDADGTVGHDEGTVDADPEKTTLNPYILARNRCVAQLKQRLVEVEGSAQEL |
Ga0116226_115761081 | 3300009787 | Host-Associated | MERDENAVISDANGIVGHDEGTVDADLEETTLNPYILARNRRVAQLKQRLVEVEGSAQEL |
Ga0116226_116533231 | 3300009787 | Host-Associated | QDQQKAICLSKVQMEHDENAVINDDDGTVGHDEAAMDVNPKETTPNHYILTHNMRIAQLKQRLAKVEGIAQEL* |
Ga0116226_116989441 | 3300009787 | Host-Associated | MERDENTVISDADGTVGHDSRMVDVDPEETTLNPYILARNRRVAQLKQRLAEVEGSAQEL |
Ga0116226_117193281 | 3300009787 | Host-Associated | FLRQDQHKASCLSKVQMERDENAVISDADGIVGHDEGTMDADPEETTLNPCILARNKRVAQLKQRFAEVEGSAQEL* |
Ga0116226_119228051 | 3300009787 | Host-Associated | MERDKNAVISDADGTVGHDEGTVDADPEETMLNPYILACNKRIAQLKQRLAEVEGSAQEL |
Ga0116226_119725791 | 3300009787 | Host-Associated | MEHDENAFISDADGTVGHDEGPVDADPEETTLNPYILARNMRVAQLKQRLAEVEGSVQEL |
Ga0116226_120395901 | 3300009787 | Host-Associated | MERDENAVISDADGTMGHDEGMVDANPEETTLNPYILARNRRIAQLK* |
Ga0116226_121438191 | 3300009787 | Host-Associated | MEHDENAVISDVDGTVGHDEGKVDADPEETTLNPYILTRNRRVAQLKQRLAEVEGSA* |
Ga0209208_1000140336 | 3300027807 | Host-Associated | MEHDKNVVINDDDGTMGHDEAAVDTNPKEITSNRYILAHNMRVAQLKQRLAEVEGIAQEL |
Ga0209208_100052132 | 3300027807 | Host-Associated | MEHDENVIISDDDGTMGHDEAVVDADPKETTPNPYILACNMRLAQLKQRLTEVEGSAQEL |
Ga0209208_1001755913 | 3300027807 | Host-Associated | LSKVQTKRDENAVISDVDGTVGHDEGTVDADPEETTLNPYILARNRHVAQLKRLVEVEGSAQEL |
Ga0209208_100319442 | 3300027807 | Host-Associated | MERDENAVISDVDGTVGHDEGTVDADPEETTLNPYILTRNKCVAQLKQRLAEVEGSAQEL |
Ga0209208_100460013 | 3300027807 | Host-Associated | VGHDEGPVDADPEETTLNPYILARNMHVAQLKQRLAEVEGSAQEL |
Ga0209208_100870633 | 3300027807 | Host-Associated | MEHDENAIIGHDDGTVGHDEATVDADPKETTPNPYILTCNMRIAQLKQ |
Ga0209208_100894781 | 3300027807 | Host-Associated | MERDENAVISDADGIVGHDEGTVDADPEETTLNPYILARNRCVAQLKQRLAEVEGSAQEL |
Ga0209208_101004592 | 3300027807 | Host-Associated | MEHDENAVINDADGTVGHDEGPVDADPEETTLNPYILARNMRVVELKQRLAEVEGSAQEL |
Ga0209208_101169011 | 3300027807 | Host-Associated | MERDENAVISDADGTVGHDEGTVDVDPEETMLNPYILTRNRRVVQLKQRLAEVEGSAQEL |
Ga0209208_101182771 | 3300027807 | Host-Associated | MEHDENAFISDADGTVGHDEGPVDADLEETTLNPYILAHNMHVAQLKQ |
Ga0209208_101370222 | 3300027807 | Host-Associated | MEHDENAVISDADGIVGHDEGPVDADLEETTLNPYILARNMHVAELKQRLAEVEGSAQEL |
Ga0209208_101798871 | 3300027807 | Host-Associated | MEHDENAFISDADGTVGHDEGPMDANPEETTLNPYILTRNMHVAQLKQRLAEVEGSAQEL |
Ga0209208_101880511 | 3300027807 | Host-Associated | MEHDENAVISDADGTMGHDEGPVDADLEETTLNPYILACNMRVAQLKQQLAEVEGSAQEL |
Ga0209208_103247052 | 3300027807 | Host-Associated | MERDENAVISDADGIVGHDEGTMDADPEETTLNPCILARNKRVAQLKQRFAEVEGSAQEL |
Ga0209208_104862161 | 3300027807 | Host-Associated | MERDENVVISDADGTVGHDEGTVDADPEETTLNPYILARNRRVAQLKQRLAEVEGSAQEL |
Ga0209208_105320142 | 3300027807 | Host-Associated | MEHDENAFISDADGTVGHDEGPVDADPEETTLNPYILTRNMRVVQLKQRLAKVEGSAQEL |
Ga0209611_1000320626 | 3300027860 | Host-Associated | MEHDENAVIGDVDGTVDADPKKIMPNPYILARNMRVAQLKQRLAEVEGSAQEL |
Ga0209611_1000559517 | 3300027860 | Host-Associated | MEHDENAVISDVDGTVGHDEGIVDTDPTKTMPNPYILAHNMRVAQLKQQLVEVEGSAQEL |
Ga0209611_100084979 | 3300027860 | Host-Associated | MEHDKNVVINDNDGAMSDDEIVVDVDPKEITPNPYVLAHNMRVAQFKQRFAEVEGIAHEL |
Ga0209611_1000870417 | 3300027860 | Host-Associated | MNKVQIMEHDENAVISDANGTVGHDEGIVDANPKETMPNPDILARNMRVAQLKH |
Ga0209611_100096682 | 3300027860 | Host-Associated | MEHDKNAVISDDDGTMGDDEAVVDADFKETTPNPYVLARNMHVVQLKQQFTEVEGSAHEL |
Ga0209611_1001651610 | 3300027860 | Host-Associated | MEHDKNAVISDANGTMGHDEGTVDADPKETMPNPYILARNMRVARFKQ |
Ga0209611_100295235 | 3300027860 | Host-Associated | MEHDENEVIGDVDGTMGDDEGTVDVDPEETTPNPYILTCNMRVAQLKQ |
Ga0209611_100501413 | 3300027860 | Host-Associated | MEHDKNVVISDDDGTMGDDEAVVDADFKETTPNPYVLARNMRVAQLKQRFTKVERSAHEL |
Ga0209611_100554951 | 3300027860 | Host-Associated | MEHDENAVISDDDGTVGHDEAAMDADPIETTPNPYVLAHNMRVT |
Ga0209611_100595442 | 3300027860 | Host-Associated | MEHDENEVIDDADGTMGDDEGTVDVDPEETTPNPYILARNMRVAQLKQRLAEVEGSAQEL |
Ga0209611_100819683 | 3300027860 | Host-Associated | MEHDKNAVISDVDGTVGHDEGKVDANPKETMPNPYILTRNMRVVQLKQRLAEVEGSAQEL |
Ga0209611_101110201 | 3300027860 | Host-Associated | MEHDENEVIGDADGTMGDDERTMDVDPEETAPKPYIVARNMRIAQLKQRFAEVERSA |
Ga0209611_101178793 | 3300027860 | Host-Associated | MEHDENAIISDVDGTVGHDEGIVDVDPKETMPNPYILARNMRVAQFKQRLTEDEGSAQEL |
Ga0209611_101288992 | 3300027860 | Host-Associated | MNKVQMEHDENAVISDVDGTVGHDEGIVDADPKETMPNPYILARNMRVAQFKQRLAEVEGSAHEL |
Ga0209611_102385911 | 3300027860 | Host-Associated | MEHDENAVISDDDGTVGHDEAAMDADPIETTPNPYVLARNMHVT |
Ga0209611_102740591 | 3300027860 | Host-Associated | MEHDENAVISDVNGIVGHDEGTMDVDPQETMPNPYILACNMRVVQSKQ |
Ga0209611_102743911 | 3300027860 | Host-Associated | MEHDENAVISDVDGTVGHDEGTVDVDPQETMPNPYILACNMRVAQSKQ |
Ga0311363_107253721 | 3300029922 | Fen | MEHDENAFISDVDGTVGHDEGPVDADPEETTLNPYILARNMRVAQLKQRLAEVEGSAQEL |
Ga0311342_111063231 | 3300029955 | Bog | SDVDGTVGHDEGPVDADPEETTLNPYILARNMRVAQLKQRLAEVEGSAQEL |
Ga0302280_11699301 | 3300029985 | Fen | MEHDENAVISDVDGIVGHDKGPVDADPEETTLNPYILACNMRVAQLKQRLAEVEGSAQEL |
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