Metagenome / Metatranscriptome Family F100204

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100204
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	52 residues
Representative Sequence	TGYAYETVPNKPIIAGKTKGPDVITLQPASLGHLARGASAIPAWRGKE
Number of Associated Samples	59
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.26 %
% of genes near scaffold ends (potentially truncated)	85.29 %
% of genes from short scaffolds (< 2000 bps)	78.43 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.941 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.47% β-sheet: 0.00% Coil/Unstructured: 85.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00009	GTP_EFTU	2.94
PF00072	Response_reg	1.96
PF13432	TPR_16	1.96
PF01112	Asparaginase_2	1.96
PF13570	PQQ_3	1.96
PF00925	GTP_cyclohydro2	1.96
PF04185	Phosphoesterase	1.96
PF00144	Beta-lactamase	0.98
PF00926	DHBP_synthase	0.98
PF02223	Thymidylate_kin	0.98
PF01833	TIG	0.98
PF13456	RVT_3	0.98
PF00990	GGDEF	0.98
PF10282	Lactonase	0.98
PF00834	Ribul_P_3_epim	0.98
PF08501	Shikimate_dh_N	0.98
PF09445	Methyltransf_15	0.98
PF03061	4HBT	0.98
PF13517	FG-GAP_3	0.98
PF03279	Lip_A_acyltrans	0.98
PF03729	DUF308	0.98
PF13180	PDZ_2	0.98
PF00535	Glycos_transf_2	0.98
PF01042	Ribonuc_L-PSP	0.98
PF04879	Molybdop_Fe4S4	0.98
PF05977	MFS_3	0.98
PF00571	CBS	0.98
PF03551	PadR	0.98
PF00196	GerE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.96
COG0807	GTP cyclohydrolase II	Coenzyme transport and metabolism [H]	1.96
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	1.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.98
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.98
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.98
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.98
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.98
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.98
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.98
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.98
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.98
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.98
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.98
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.98
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.98
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.82 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	1.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.82 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	1.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.90 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	3.92 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1.96 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.92 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.94 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.96 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.80 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3.92 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2.94 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.96 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_104996885	Not Available	500	Open in IMG/M
3300004475\|Ga0068969_1360376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1047	Open in IMG/M
3300004476\|Ga0068966_1439853	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300005541\|Ga0070733_10572571	Not Available	757	Open in IMG/M
3300005541\|Ga0070733_11156615	Not Available	518	Open in IMG/M
3300009523\|Ga0116221_1163594	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	967	Open in IMG/M
3300009638\|Ga0116113_1205510	Not Available	511	Open in IMG/M
3300009698\|Ga0116216_10038329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2971	Open in IMG/M
3300009698\|Ga0116216_10113349	Not Available	1669	Open in IMG/M
3300009700\|Ga0116217_10408669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	861	Open in IMG/M
3300009824\|Ga0116219_10093089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300010339\|Ga0074046_10097407	Not Available	1901	Open in IMG/M
3300010339\|Ga0074046_10468495	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300010339\|Ga0074046_10848190	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300010358\|Ga0126370_10086744	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300010366\|Ga0126379_10880062	Not Available	997	Open in IMG/M
3300010366\|Ga0126379_13050733	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010398\|Ga0126383_11728002	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300011120\|Ga0150983_11949152	Not Available	1340	Open in IMG/M
3300011305\|Ga0138532_1009603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	740	Open in IMG/M
3300017822\|Ga0187802_10151772	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300017822\|Ga0187802_10260137	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300017822\|Ga0187802_10281593	Not Available	646	Open in IMG/M
3300017823\|Ga0187818_10107490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1208	Open in IMG/M
3300017823\|Ga0187818_10306331	Not Available	698	Open in IMG/M
3300017823\|Ga0187818_10413145	Not Available	600	Open in IMG/M
3300017924\|Ga0187820_1024115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300017933\|Ga0187801_10333258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	622	Open in IMG/M
3300017933\|Ga0187801_10358148	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300017933\|Ga0187801_10448052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300017933\|Ga0187801_10466840	Not Available	531	Open in IMG/M
3300017934\|Ga0187803_10033330	Not Available	2046	Open in IMG/M
3300017943\|Ga0187819_10311128	Not Available	914	Open in IMG/M
3300017943\|Ga0187819_10354112	Not Available	848	Open in IMG/M
3300017943\|Ga0187819_10385894	Not Available	806	Open in IMG/M
3300017943\|Ga0187819_10694906	Not Available	574	Open in IMG/M
3300017943\|Ga0187819_10736999	Not Available	555	Open in IMG/M
3300017943\|Ga0187819_10865467	Not Available	506	Open in IMG/M
3300017955\|Ga0187817_10131872	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1584	Open in IMG/M
3300017955\|Ga0187817_10171578	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1381	Open in IMG/M
3300017955\|Ga0187817_10226803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300017955\|Ga0187817_10505201	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300017955\|Ga0187817_10673665	Not Available	660	Open in IMG/M
3300017955\|Ga0187817_11076134	Not Available	516	Open in IMG/M
3300017955\|Ga0187817_11104097	Not Available	509	Open in IMG/M
3300017972\|Ga0187781_11314820	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300017975\|Ga0187782_11575015	Not Available	518	Open in IMG/M
3300018007\|Ga0187805_10190674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300018007\|Ga0187805_10294040	Not Available	747	Open in IMG/M
3300018007\|Ga0187805_10391553	Not Available	645	Open in IMG/M
3300018007\|Ga0187805_10470851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	587	Open in IMG/M
3300018012\|Ga0187810_10134822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300018012\|Ga0187810_10198085	Not Available	816	Open in IMG/M
3300018062\|Ga0187784_10531687	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018086\|Ga0187769_10038518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3279	Open in IMG/M
3300018086\|Ga0187769_10728087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300018086\|Ga0187769_10880052	Not Available	677	Open in IMG/M
3300018088\|Ga0187771_11481589	Not Available	576	Open in IMG/M
3300020579\|Ga0210407_10321616	All Organisms → cellular organisms → Bacteria → Acidobacteria	1209	Open in IMG/M
3300020580\|Ga0210403_11491593	Not Available	509	Open in IMG/M
3300021168\|Ga0210406_10007684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10900	Open in IMG/M
3300021168\|Ga0210406_10015713	All Organisms → cellular organisms → Bacteria	7201	Open in IMG/M
3300021170\|Ga0210400_11480200	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300021178\|Ga0210408_10651591	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300021401\|Ga0210393_11208975	Not Available	608	Open in IMG/M
3300021403\|Ga0210397_10795029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300021478\|Ga0210402_10139923	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2199	Open in IMG/M
3300021478\|Ga0210402_10295223	Not Available	1500	Open in IMG/M
3300021478\|Ga0210402_10397946	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300021478\|Ga0210402_11893921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021858\|Ga0213852_1261240	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300027570\|Ga0208043_1008611	All Organisms → cellular organisms → Bacteria	3468	Open in IMG/M
3300027641\|Ga0208827_1133060	Not Available	705	Open in IMG/M
3300027795\|Ga0209139_10016454	All Organisms → cellular organisms → Bacteria	2695	Open in IMG/M
3300027854\|Ga0209517_10018554	All Organisms → cellular organisms → Bacteria	6667	Open in IMG/M
3300027854\|Ga0209517_10038598	All Organisms → cellular organisms → Bacteria → Acidobacteria	3825	Open in IMG/M
3300027857\|Ga0209166_10439309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300027869\|Ga0209579_10348811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300027911\|Ga0209698_10262007	Not Available	1378	Open in IMG/M
3300030494\|Ga0310037_10169209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300030659\|Ga0316363_10320171	Not Available	616	Open in IMG/M
3300030707\|Ga0310038_10287275	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300031753\|Ga0307477_10262054	Not Available	1197	Open in IMG/M
3300032160\|Ga0311301_10162305	All Organisms → cellular organisms → Bacteria	3986	Open in IMG/M
3300032180\|Ga0307471_100866812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1070	Open in IMG/M
3300032892\|Ga0335081_10352853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300032892\|Ga0335081_11182794	Not Available	873	Open in IMG/M
3300032892\|Ga0335081_11852918	Not Available	650	Open in IMG/M
3300033158\|Ga0335077_10619979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1126	Open in IMG/M
3300033158\|Ga0335077_11696066	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300033158\|Ga0335077_12244407	Not Available	500	Open in IMG/M
3300033755\|Ga0371489_0491330	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.82%
Aquatic	Environmental → Aquatic	41.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.84%
Freshwater	Environmental → Aquatic → Freshwater	40.20%
Sediment	Environmental → Aquatic → Sediment	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	39.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	32.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	32.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011305	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1033042581	3300004092	Bog Forest Soil	DVVTLEPDEPIITGKTKGPDVITLDPATLGHLAQGASGISAWRGKK*
Ga0062389_1049968851	3300004092	Bog Forest Soil	GYPAVLTGFAYETIAGKAIIAGQTKGLDVVTVEPASLGHLATGASAIPAWRVKPTVATTH
Ga0068969_13603762	3300004475	Peatlands Soil	TLTGYAYETIPNKAIIAGKTHGKDVITLEPASLGHLARGASAISAWRKAGGN*
Ga0068966_14398533	3300004476	Peatlands Soil	AYETIPGKRIVAGKTKGRDEITLQPATLGHLAAGASAIPAWRVKQATMTTH*
Ga0070733_105725712	3300005541	Surface Soil	LQLAVTLTGYAYETVPNKPIIAGKTKGPDVITVQPGTLGQLAHGAAAIPTWRTKQ*
Ga0070733_111566152	3300005541	Surface Soil	YAYETIPNKPIIAGKTNGPDVITVQPASLGHLAHGAAAIPAWRFAAPVQ*
Ga0116221_11635942	3300009523	Peatlands Soil	ETIPNKAIIAGKTHGKDVIIVEPASLGHLARGASAVSAWRRTKSAAAAH*
Ga0116221_11942181	3300009523	Peatlands Soil	LTGYAYETIPNKPIITGKTKGPDVITIELASLGRLAQGASGISAWREKK*
Ga0116133_10863941	3300009623	Peatland	TIPNKPIIAGKTNGPDVITLEPVTLGRLAQGASGISAWREKK*
Ga0116125_10838601	3300009628	Peatland	LTGYAYETIPDKPIITGATDGPDVITLEPVTLGRLAQGSEAITAWRVKK*
Ga0116113_12055102	3300009638	Peatland	GHAYETIANRAIIAGKTKGADVVTVQPASLGHLAHGASAISAWRSTGGNQ*
Ga0116216_100383291	3300009698	Peatlands Soil	LTGYAYETIPNKPIIAGKTKGPDVTVEPPGLGDLARGVSGLSAWRRTNSVAAPR*
Ga0116216_101133491	3300009698	Peatlands Soil	TLTGYAYETIPNKPIITDKTKGPDVITLEPASLGRLAQGASGISAWRAQK*
Ga0116217_104086693	3300009700	Peatlands Soil	LTGYAYETIPGKPIIAGKTHGKDVITVEPASLGHLARGASAVSTWRGPNSAK*
Ga0116219_100930892	3300009824	Peatlands Soil	NVSFPNLTLSATLTGYAYETIPGKRIVAGKTKGRDEITLQPATLGHLAAGASAIPAWRVKQTAATIH*
Ga0074046_100974071	3300010339	Bog Forest Soil	DATLTGYAYETIPNKPIIAGKEHGADDSMKQPGSLGHLAAGSAGLAAWRSGR*
Ga0074046_104684952	3300010339	Bog Forest Soil	GYAYETIANKPIIAGKTKGADVITVQPASLGHLAQGSAGLAAWRTGK*
Ga0074046_108481902	3300010339	Bog Forest Soil	LTGYAYETIPNKAIIAGKTKGPDVIAAQPATLGNLAAGASAIPAWRRAGQ*
Ga0126370_100867441	3300010358	Tropical Forest Soil	GYAYETTPSKPIVAGKTKGPNVVTVSPASLGHLAAGASAIPAWRSGK*
Ga0126379_108800623	3300010366	Tropical Forest Soil	LTGYAYETIPGKAIIAGKTKGPDVTTVDPSSLGHLAAGASAIPAWRSGK*
Ga0126379_130507331	3300010366	Tropical Forest Soil	GVGEQGCMSLSGYAYETIPGKAIIAGQTNGPDVTTVDPASLGHLAAGASAIPAWPVKQTTATTH*
Ga0126383_117280022	3300010398	Tropical Forest Soil	LTGYAYETIPNKPIIAGKTKGPDVTTVAPASLGHLAAGASAIPAWRVKQIKATTH*
Ga0150983_119491522	3300011120	Forest Soil	HDFKATLTGYAYETIPGKPIIAGKTMGPDDTTVAPTSLGHLAAGASAIPAWRVKRAQSITH*
Ga0138532_10096031	3300011305	Peatlands Soil	GYAYETIANKPIIAGKTKGPDVITLEPASLGHLAQGASAIQAWRSKEQ*
Ga0187802_101517721	3300017822	Freshwater Sediment	IAGKTKGPDVITLQPASLGHLAQGASGLSAWRRTNSVAAGH
Ga0187802_102601372	3300017822	Freshwater Sediment	LTGYAYETVANKPIVTGKTKGPDVIILPATLGHLALGASAIAAWRSQAGSN
Ga0187802_102815931	3300017822	Freshwater Sediment	YETIPGKAIVAGKTKGPDVTTVQPASLGHLAAGASAIPAWRTGSR
Ga0187818_101074903	3300017823	Freshwater Sediment	TGTLTGYAYETIPNKPIIAGKTKGPDVITVRPATLGHLAAGASAISGWRASVNH
Ga0187818_103063311	3300017823	Freshwater Sediment	TGYAYETIANKPIITGKTKGRDVITVQDASLGHLARGASAIPARRTAGATQ
Ga0187818_104131451	3300017823	Freshwater Sediment	LTGYAYETIPNKPIIAGKTNGKDAITVQPVSLGHLAQGASAIPAWRTKESK
Ga0187820_10241153	3300017924	Freshwater Sediment	SRFMVVLTGYAYETIPNKPIIAGKTTQPDVVAVQDPTLGHLARGASAISPWRAKEQ
Ga0187801_103332581	3300017933	Freshwater Sediment	ESTVSAVLTGYAYETIPNKPIIAGKTHAKDVITIQPGASLGALAVGANGLRAWR
Ga0187801_103581481	3300017933	Freshwater Sediment	VSFPNLTLSATLTGYAYEIIPGKRIVAGKTKGPDVITAQPTTLGHLAAGASAIPAWRVKRTAAAIH
Ga0187801_104480522	3300017933	Freshwater Sediment	TLTGYAYETIPNKPIIAGKTKGPDVIALEPASLGHLARGASGLSAWRRTNTVAASH
Ga0187801_104668402	3300017933	Freshwater Sediment	GYAYETIPNKPIIAGKTKGRDVITIQPASLGALAAGSSAIPTWRPQKAN
Ga0187803_100333301	3300017934	Freshwater Sediment	TLTGYAYETIPNKPIIAGKTKGPDVALEPATLGHLAQGASGIPVWRGRDSVAPTR
Ga0187819_103111282	3300017943	Freshwater Sediment	TGYAYETIPNKPIIAGKTKGPDVVTVQPATLGHLAAGASAIPAWRTESSDGTH
Ga0187819_103541122	3300017943	Freshwater Sediment	VTLTGYAYETIPNKAIIAGKTKGPDVTTLQDPSLGHLARGASAIPIWRKAGGNQ
Ga0187819_103858941	3300017943	Freshwater Sediment	ATLTGYAYETIPNKPIIAGKTHGKDVITVEPASLGHLARGASAIPAWRGEQ
Ga0187819_106949061	3300017943	Freshwater Sediment	YAYETIPGKAIITGKTHGPDVITLQDASLGHLARGSSAISTWRVKEGK
Ga0187819_107369992	3300017943	Freshwater Sediment	AYETVPKKPIIAGKTKGPDVITLQDASLGHLARGASAIPAWRHKEQ
Ga0187819_108654672	3300017943	Freshwater Sediment	TGYAYETIVNKAIIAGKTHEKDVGTLQPASLGHLARGASAMQAWRVRESK
Ga0187817_101318721	3300017955	Freshwater Sediment	VSATLTGYAYETIPGKAIITGKTHGPDVITLQDASLGHLARGASGLSAWRQSK
Ga0187817_101715782	3300017955	Freshwater Sediment	AFETVPNKSIIAGKTKGPDVITLEPASLGHLARGASAVSAWRRTKSAAATH
Ga0187817_102268031	3300017955	Freshwater Sediment	VSFPNLTLSATLTGYAYDTIPGKRIVAGKTKGPDVITAQPTTLGHLAAGASAIPAWRVKRTAAAIH
Ga0187817_102479541	3300017955	Freshwater Sediment	ENHIGFGLDAVITGYAYETVANKPIIAGKTHGKDVITVKRASLGHRARGASELRAWREKE
Ga0187817_105052011	3300017955	Freshwater Sediment	LTGYAYETIPGKAIIAGKTKGPNVTTVYPASLGHLAAGASAIPAWRVKRTAATTH
Ga0187817_106736652	3300017955	Freshwater Sediment	GYAYETIPNKPIIAGKTHGKDVITVEPASLGHLARGASAIPAWRGEQ
Ga0187817_110761341	3300017955	Freshwater Sediment	LDINSVLLTGYAYETIPNRSIIAGKTKGPDVITVEPASLGHLAQGASALSAWRRKESR
Ga0187817_111040971	3300017955	Freshwater Sediment	TGYAYETVPNKPIIAGKTKGPDVITLQPASLGHLARGASAIPAWRGKE
Ga0187783_102632713	3300017970	Tropical Peatland	YAYETVPNKPIVTGKTKGPDVITLEPASLGRLAQGASGISSWRTKK
Ga0187781_113148203	3300017972	Tropical Peatland	IRATLTGYAYETIPNKPIITGKTKGPDVITVQPTSLGHLAAGASAIPAWRTEK
Ga0187782_115750151	3300017975	Tropical Peatland	TGYAYETVPNRPIVTGTTKGPDVTTVQPASLGRLAQGASGLAAWRQKESTSSTH
Ga0187804_102716491	3300018006	Freshwater Sediment	TIPNKPIIAGRTHGKDAVTVEPACLGHLARGASVIPAWRGKE
Ga0187805_101906741	3300018007	Freshwater Sediment	GYAYETIPNKPIIAGKTKGPDVTVEPPGLGDLARGVSGLSAWRRTNSVAAPH
Ga0187805_102940401	3300018007	Freshwater Sediment	VLTGYAYETIPNKLIITGKTKGPDVITAQPGSLGHLAQGAAVVPVRSVQVASH
Ga0187805_103915532	3300018007	Freshwater Sediment	ATLTGYAYETIPNKPIIAGKTHGKDVITLDDASLGHLARGASAIPAWRGTN
Ga0187805_104708512	3300018007	Freshwater Sediment	PESTVSAALTGYAYETIPNKPSIAGKTHGNDVMTPQPGASLGALAVGANGLRTWR
Ga0187810_101348222	3300018012	Freshwater Sediment	GYAYETIPGKAIIAGKTKGPDVTTVQPASLGHLAAGASAIPAWRVKRTAATTH
Ga0187810_101980851	3300018012	Freshwater Sediment	IDATLTGYAYETIPNKPIITGKTKRADAITVEPAKLGHLAAGASAVSGRRKSELVATDQ
Ga0187867_106463032	3300018033	Peatland	AYETIPNKPIIAGKTKGPDVVTWEPATLGRLAQGASGISAWREKK
Ga0187784_105316871	3300018062	Tropical Peatland	ASIGSRDDISATLTGYAYETIPNKPIITGKTKGPDVITVQPASLGHLATGASAIPAWRTG
Ga0187769_100385181	3300018086	Tropical Peatland	GYAYETIPKKPIITGKTKGPDVVTLEPATLGRLGQGASGIAAWREQK
Ga0187769_107280872	3300018086	Tropical Peatland	YETVPNKPIITGKTKGPDVVTLEPATLGRLGQGASGIAAWRKQK
Ga0187769_108800521	3300018086	Tropical Peatland	LHYLQFVLTGYAYETIPNKPIITGKTKGPDRIELEPASLGHLSRGASAISKWRTGNVAAEPR
Ga0187771_114815891	3300018088	Tropical Peatland	YETIPNKAIIAGKTKGPDVITVQPASLGRLAQGSAAIAAWRREKPTDGTH
Ga0187771_116568012	3300018088	Tropical Peatland	PNKAIIAGKTKGSDVTTVPPSTLGRLAQGASGLAARRLKESANSTH
Ga0210407_103216164	3300020579	Soil	TLTGYAYETISNKPIIAGRTKGSDVVTVQPATLGHLAAGASAIPASRSSQSVAPRH
Ga0210403_114915932	3300020580	Soil	GYAYETIPNKPIVAGKTTGPDVVMVQPATLGHLAAGASAIPAWRKAGGSK
Ga0210406_100076841	3300021168	Soil	YAYETIPNKPIIAGRTHGKDEATIGHLATGASAIPAWRVKPTAATSH
Ga0210406_100157136	3300021168	Soil	YQGQYPAFATTLTGYAYETIPNKPIVTGKTHGKNDATLGRLAAGASAIPAWRKPGASK
Ga0210400_114802001	3300021170	Soil	TGYAYEAIPGKSIIAGKTKGPDVITVQPASLGHLAAGASAIPAWRSGK
Ga0210408_106515911	3300021178	Soil	LTGYAYETIANKPIIAGKIKGPDTTAVQAATLGHLARGEGAISSWRVKQISAPTR
Ga0210393_112089751	3300021401	Soil	YETVANKPIIAGKTKGPDVITAQPAGLGSLARGTAAIPAWRTQH
Ga0210397_107950292	3300021403	Soil	ATLTGYAYETIPNKPIITGKIKGPDVVVLPPASLGHLAQGASAIPAWRGKK
Ga0210397_111065801	3300021403	Soil	KPIVTGKTNGPDVITLKPATLGRLAQGASGISAWREKK
Ga0210402_101399233	3300021478	Soil	GKRFTATLTGYAYETIPGKGIVAGKRTDSDVATFSPASLGHLAAGASAIPAWRLKHTAATIH
Ga0210402_102952233	3300021478	Soil	VNRSDVTTTLTGYAYETVSNKPITTGRTKGPDVIAVHRAKLGHLAAGSAIPAWGKAGVYK
Ga0210402_103979463	3300021478	Soil	KGLTATLTGYAYETIPNKAIVAGKTKGPDIVAVEPASLGHLAQGASAIPAWRR
Ga0210402_118939211	3300021478	Soil	TATLTGYAYETIPGKAIIAGKTNGSDVTIHSASLGHLAAGSSAIPAWRVKQTAATTH
Ga0213852_12612402	3300021858	Watersheds	LTGYAYETVPNKPIVTGKTKGPDVVAVEPASLGRLAQGASGLSAWRGKESAAGVP
Ga0208043_10086111	3300027570	Peatlands Soil	TVPNKPIIAGKTKGPNVVTVQPASLGHLAAGASAIPAWRSRK
Ga0208827_11330601	3300027641	Peatlands Soil	YETIPNKAIIAGKTHGKDVIIVEPASLGHLARGASAVSAWRRTKSAAAAH
Ga0209139_100164541	3300027795	Bog Forest Soil	ESVSDINATLTGYAYETIPNKPIIAGKTHGNDEATLGHLATGASAIPAWRVEPTTTTTH
Ga0209517_100185546	3300027854	Peatlands Soil	ALLMGYAYETVPNKPIIAGKTKGPNVVTVQPASLGHLAAGASAIPAWRSRK
Ga0209517_100385981	3300027854	Peatlands Soil	ASGILTGYAYETIPNKPIIAGKTKGRDVITVEPASLGHLARGASGLSVWRGANSAR
Ga0209166_104393091	3300027857	Surface Soil	YAYETIPGKAIIAGKTNGSDVTIYPASLGHLAAGASAVSSWRVQQTAATSH
Ga0209579_103488112	3300027869	Surface Soil	PGSDVVGTLTGYAYETIPNKPIIAGETKGPDVVAVQPASLGHLAAGASANPAGRSAK
Ga0209698_102620071	3300027911	Watersheds	YETIPNKPIIAGKIKGPDVITLQPASLGHLARGASGLPAWRKQSAGGTH
Ga0310037_101692092	3300030494	Peatlands Soil	ETIPNKPIITGKTKGPDVVTIEPTSLGHLAKGASAIFRWRTAGGNR
Ga0316363_103201711	3300030659	Peatlands Soil	IVAGKTHGKDVITVEPATLGHLARGASGLSAWRRTNSVAATH
Ga0310038_102872752	3300030707	Peatlands Soil	IPNKPIIAGKTRGRDVITLEPASLGHLAQGASRLSAWRKESAGGGTH
Ga0307477_102620543	3300031753	Hardwood Forest Soil	PHGTLKATVTGYAYETIPNKAIIAGKTTGPDVVTLEPASLGHLARGASAIPAWRAKQTEVDAH
Ga0311301_101623053	3300032160	Peatlands Soil	MSGYAYETIPNKPITAGKTEGPDVITVQPATLGHLAAGASAIPAWRRADQ
Ga0307471_1008668124	3300032180	Hardwood Forest Soil	YAYETVPNKPIIAGKTHGEDVITVQPASLGYLARGASAIPAWRVKEGK
Ga0335081_103528532	3300032892	Soil	SCASFHCNGLLTGYAYETVANKAIVTGKTKGPDVVVLQAGTLGGLARGASGIRASREK
Ga0335081_111827941	3300032892	Soil	TLKGYAYETIPNKPIIAGKTHGKDVVTVQPASLGHLARGASAIPAWRGNPK
Ga0335081_118529182	3300032892	Soil	ATIVAILTGYAYETIPNKPIIAGKTHGKDVITIKPASLGHLARGAAAIPAWRNKE
Ga0335077_106199791	3300033158	Soil	LTGYAYETIPNKPIIAGKTKGPDVVTVQAPSLGHLARGASAIPAWRTKP
Ga0335077_116960662	3300033158	Soil	IPNKAIITGKTKGPDVITVQPGTLGHLARGAMARRTTSAQ
Ga0335077_122444072	3300033158	Soil	VNITATMTGYAYETVPNKAIIAGKTKGPDVVTVQPASLGRLAAGAVAIPRRR
Ga0371489_0491330_2_151	3300033755	Peat Soil	MTGYAYETVANKPIITGKTKGPDVTTVQPASLGRLAAGASAIPAWRSVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100204

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences