Metagenome / Metatranscriptome Family F100059

Basic Information
Family ID	F100059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	43 residues
Representative Sequence	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVHGNFFYGSKS
Number of Associated Samples	91
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	45.63 %
% of genes near scaffold ends (potentially truncated)	69.90 %
% of genes from short scaffolds (< 2000 bps)	96.12 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.961 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (13.592 % of family members)
Environment Ontology (ENVO)	Unclassified (66.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.495 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1Ocean1-_00044070 2GS312G0146KB_00233380 3GS312G0146KB_00326490 4LP_F_10_SI03_150DRAFT_10107733 5SI34jun09_135mDRAFT_10314841 6SI34jun09_100mDRAFT_10236401 7SI34jun09_100mDRAFT_10346212 8JGI20151J14362_101831691 9GOS2226_10273715 10JGI26238J51125_11077571 11JGI26239J51126_10272392 12JGI26255J51710_10097374 13JGI26381J51731_10358131 14JGI26380J51729_100430031 15JGI26380J51729_100955501 16Ga0066849_103679882 17Ga0075474_101349821 18Ga0102906_11161101 19Ga0075480_106171492 20Ga0102891_10505672 21Ga0102960_12110361 22Ga0102963_11828882 23Ga0102813_11072782 24Ga0102886_11468192 25Ga0102814_107820651 26Ga0115551_13318292 27Ga0115551_13622271 28Ga0115562_13043922 29Ga0115556_10375411 30Ga0115561_11941972 31Ga0115555_12450522 32Ga0115568_101614752 33Ga0115567_108779422 34Ga0115011_112573101 35Ga0115011_117541452 36Ga0114933_101735841 37Ga0136809_11110023 38Ga0160423_103767222 39Ga0163109_105461231 40Ga0163111_105189771 41Ga0163111_107468702 42Ga0163111_121666181 43Ga0182082_12621241 44Ga0181404_10286103 45Ga0181417_10964602 46Ga0181421_10436562 47Ga0181422_12498682 48Ga0181422_12558332 49Ga0181423_10869732 50Ga0181379_11955712 51Ga0181424_101977162 52Ga0181565_104333112 53Ga0181552_104355242 54Ga0181582_104749272 55Ga0181572_105393651 56Ga0181553_107605952 57Ga0181564_103056271 58Ga0181595_102631412 59Ga0181595_102631462 60Ga0181596_103213501 61Ga0181604_104549222 62Ga0211653_105011692 63Ga0211514_101434332 64Ga0211514_105323332 65Ga0211676_100746304 66Ga0206677_102119392 67Ga0206677_102831012 68Ga0206683_101163383 69Ga0206683_101318332 70Ga0206679_107118952 71Ga0213860_101382552 72Ga0222717_101662702 73Ga0233428_12772781 74Ga0255775_10407051 75Ga0255758_101805211 76Ga0228665_10583301 77Ga0233436_10390093 78Ga0233435_11685212 79Ga0233441_10499361 80Ga0233439_103853971 81Ga0233443_12022102 82Ga0228631_11369832 83Ga0209249_10373553 84Ga0209601_11224841 85Ga0209306_10980852 86Ga0209374_10872113 87Ga0209666_11038753 88Ga0209335_104054232 89Ga0209961_10824391 90Ga0209932_10357752 91Ga0228620_10459331 92Ga0208946_10717603 93Ga0208680_10360841 94Ga0208949_10590182 95Ga0233450_101678391 96Ga0257118_10477473 97Ga0257117_10387841 98Ga0257126_11892422 99Ga0233394_10905031 100Ga0315332_107444771 101Ga0315320_108304742 102Ga0315316_116194982 103Ga0315321_106784341
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1Ocean1-_00044070 2LP_F_10_SI03_150DRAFT_10107733 3SI34jun09_135mDRAFT_10314841 4GOS2226_10273715 5Ga0102960_12110361 6Ga0114933_101735841 7Ga0163109_105461231 8Ga0163111_121666181 9Ga0181404_10286103 10Ga0181417_10964602 11Ga0181421_10436562 12Ga0181422_12498682 13Ga0181423_10869732 14Ga0181424_101977162 15Ga0181564_103056271 16Ga0211514_101434332 17Ga0206679_107118952 18Ga0255775_10407051 19Ga0228620_10459331
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0066849_103679882 2Ocean1-_00044070 3SI34jun09_100mDRAFT_10346212 4Ga0075474_101349821 5Ga0102891_10505672 6Ga0102813_11072782 7Ga0115551_13622271 8Ga0115568_101614752 9Ga0115011_112573101 10Ga0114933_101735841 11Ga0163109_105461231 12Ga0163111_107468702 13Ga0163111_121666181 14Ga0181404_10286103 15Ga0181417_10964602 16Ga0181421_10436562 17Ga0181379_11955712 18Ga0181424_101977162 19Ga0181565_104333112 20Ga0211653_105011692 21Ga0211514_101434332 22Ga0211514_105323332 23Ga0211676_100746304 24Ga0255758_101805211 25Ga0233439_103853971 26Ga0209961_10824391 27Ga0228620_10459331 28Ga0315316_116194982
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.54% β-sheet: 0.00% Coil/Unstructured: 77.46%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00355	Rieske	37.86
PF00848	Ring_hydroxyl_A	23.30
PF02219	MTHFR	6.80
PF01571	GCV_T	5.83
PF08669	GCV_T_C	1.94
PF13671	AAA_33	0.97
PF13238	AAA_18	0.97
PF08433	KTI12	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	46.60
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	6.80
COG4088	tRNA uridine 5-carbamoylmethylation protein Kti12 (Killer toxin insensitivity protein)	Translation, ribosomal structure and biogenesis [J]	0.97

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.04 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	32.04 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.04 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.04 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.04 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	25.24 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	25.24 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	25.24 %
Unclassified	root	N/A	67.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3.88 %
Unclassified	root	N/A	67.96 %

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300022888\|Ga0233428_1277278	Not Available	523	Open in IMG/M
(restricted) 3300024243\|Ga0233436_1039009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1905	Open in IMG/M
(restricted) 3300024252\|Ga0233435_1168521	Not Available	655	Open in IMG/M
(restricted) 3300024260\|Ga0233441_1049936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1629	Open in IMG/M
(restricted) 3300024261\|Ga0233439_10385397	Not Available	578	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1202210	Not Available	696	Open in IMG/M
2166559013\|NCBI_BBAY_READ_1105787249877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	949	Open in IMG/M
2189573027\|GS312G0146KB_1114011670999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	949	Open in IMG/M
2189573027\|GS312G0146KB_1118463101529	Not Available	770	Open in IMG/M
3300000213\|LP_F_10_SI03_150DRAFT_c1010773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1948	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	0.97%
Aquatic	Environmental → Aquatic	99.03%

Habitat	Taxonomy	Distribution
Brown Algae	Host-Associated → Algae → Brown Algae	0.97%
Marine	Environmental → Aquatic → Marine	95.15%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.88%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	6.80%
Inlet	Environmental → Aquatic → Marine → Inlet	8.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	43.69%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.94%
Oceanic	Environmental → Aquatic → Marine → Oceanic	9.71%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.71%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.88%
Strait	Environmental → Aquatic → Marine → Strait	7.77%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.83%
Unclassified	Host-Associated → Algae → Brown Algae → Unclassified	0.97%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.97%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.77%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	13.59%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	22.33%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.71%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	8.74%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.77%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.97%
Unclassified	Host-Associated → Algae → Brown Algae → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.94%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.97%
Environmental And Host-Associated	Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated	0.97%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.83%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.97%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	13.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.91%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	2.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.97%
Marine Brown Algae (Kelp) Associated	Host-Associated → Algae → Brown Algae → Unclassified → Unclassified → Marine Brown Algae (Kelp) Associated	0.97%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	1.94%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.71%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.94%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.91%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	13.59%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	8.74%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.77%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	5.83%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	4.85%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.85%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.97%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559013	Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean1 (Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY01 3688)	Environmental	Open in IMG/M
2189573027	Estuarine microbial communities from Columbia River, sample from CR-7km from mouth, GS312-FOS-0p8-CR7-chlmax	Environmental	Open in IMG/M
3300000213	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_150	Environmental	Open in IMG/M
3300000226	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 135m	Environmental	Open in IMG/M
3300000254	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 100m	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001943	Marine microbial communities from Cape May, New Jersey, USA - GS010	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003498	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA	Environmental	Open in IMG/M
3300003596	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ocean1-_00044070	2166559013	Environmental And Host-Associated	MKNSFFPIIILFEKAVKEIQHCSKWKFVAKNYAHDNFFYGSKSEK
GS312G0146KB_00233380	2189573027	Marine Estuarine	MKNSFFPIIILFEKAVKEIQHGPKWKLVAKNYAHDNFFYGSKSEK
GS312G0146KB_00326490	2189573027	Marine Estuarine	SFFPIIILFEKAVKEIQHGPKWKFIAKNYGHGNFFYGPKS
LP_F_10_SI03_150DRAFT_10107733	3300000213	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDKF
SI34jun09_135mDRAFT_10314841	3300000226	Marine	VDQFPMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRXNFFYGPKS*
SI34jun09_100mDRAFT_10236401	3300000254	Marine	KNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDNFFYGPKS*
SI34jun09_100mDRAFT_10346212	3300000254	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVVVIFFHGPKP*
JGI20151J14362_101831691	3300001346	Pelagic Marine	MKNSFFPIIILFEKAVKEIQHGLKWKFVAKNYVHDNF
GOS2226_10273715	3300001943	Marine	FPIIILFEKAVKEIQHVPKWKFVAKNHGHGNFFYGSKS*
JGI26238J51125_11077571	3300003478	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS*
JGI26239J51126_10272392	3300003498	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRXNFFYGPKS*
JGI26255J51710_10097374	3300003596	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDNFFYGPKS*
JGI26381J51731_10358131	3300003618	Marine	FPMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS*
JGI26380J51729_100430031	3300003619	Marine	GQYVDQFPMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS*
JGI26380J51729_100955501	3300003619	Marine	NSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS*
Ga0066849_103679882	3300005430	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVHGNFFYGSKS*
Ga0075474_101349821	3300006025	Aqueous	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVHDIFFCGSKSEK*
Ga0102906_11161101	3300007637	Estuarine	MKNSFFPIIILFEKAVKEIQHGSKRKFVAKNYVRGNFFYGPKS*
Ga0075480_106171492	3300008012	Aqueous	MKNSFFQIIILFEKAVKEIQHGLKWKFVAKNYVRDIFFCGSKSEK*
Ga0102891_10505672	3300008950	Estuarine	MKSSFFPIIILFEKAVKEIHHGLKWKFVAKNFGHGNFFRGSKSEK*
Ga0102960_12110361	3300009000	Pond Water	IHFFSIIILLEKAVKEIQHGSKRKFVAKNFGHDIFFCGSKSEK*
Ga0102963_11828882	3300009001	Pond Water	MKNSFFQIIILFEKAVKEIQHVLKWKFVAKNYVHDIFFCGSKSEK*
Ga0102813_11072782	3300009003	Estuarine	MKNSFFPIIILFEKAVKEIQHGPKWKFIAKNYGHDNFFYGPKS*
Ga0102886_11468192	3300009052	Estuarine	VKFLGQCVDQFPMKNSFFPIIILFEKAVKEIQHGSKRKFVAKNYVRDNFFYGPKS*
Ga0102814_107820651	3300009079	Estuarine	MFQGQYVDQFLMKNSFFPIIILFEKAVKEIQHGPKWKFIAKNYGHGNFFYGPKS*
Ga0115551_13318292	3300009193	Pelagic Marine	MKNSFFQIIILFEKAVKEIQHGPKLKFVAKNYAHDNFFYGSKSEK*
Ga0115551_13622271	3300009193	Pelagic Marine	MKSSFFPIIILFEKAVKEIQHGLKWKFVAKNYVHDNFFVVQNQKY
Ga0115562_13043922	3300009434	Pelagic Marine	FPIIILFEKAVKEIQHGLKWKFVAKNYVRDIFFCGSKSEK*
Ga0115556_10375411	3300009437	Pelagic Marine	IIILFEKAVKEIQHAQNRNFVAKNYGHGNFFYGPKS*
Ga0115561_11941972	3300009440	Pelagic Marine	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVRDIFFCGSKSEK*
Ga0115555_12450522	3300009476	Pelagic Marine	PMKNSFFQIIILFEKAVKEIQHVLKWKFVAKNYVRDIFFCGSKSEK*
Ga0115568_101614752	3300009498	Pelagic Marine	MKNSFFPIIILFEKAVKEIQHAQNRNFVAKNYGHGNFFYGPKS*
Ga0115567_108779422	3300009508	Pelagic Marine	MKNSFFPIIILFEKAVKEIQHGPKWKFVAKNYAHDNFFYGSKSEK*
Ga0115011_112573101	3300009593	Marine	IHFFQIIILFEKAVKEIQHSYKWKIVAKNYVHGNFFYGSKP*
Ga0115011_117541452	3300009593	Marine	MKNSFFPIIILFEKAVKEIQHSPKWKFVAKNFAHGNFLYGAKS*
Ga0114933_101735841	3300009703	Deep Subsurface	QIIIFFKKAVKEIQQEPLTKFVAKNHAHDIFLCGPKS*
Ga0136809_11110023	3300010385	Marine Brown Algae (Kelp) Associated	MKNSFFPIIILFEKAVKEIQNGPKWKFIAKNYGHGNFFYGPKS*
Ga0160423_103767222	3300012920	Surface Seawater	MKNSFFQIIILFEKAVKEIQHGLKWKFVAKNYVHDNFFCGSKSEK*
Ga0163109_105461231	3300012936	Surface Seawater	IIILFKKAVKEIQHGSNLKFVAKNYLRDNFFCGSKSEK*
Ga0163111_105189771	3300012954	Surface Seawater	IILFEKAVKEIQHSPKWKFVAKNFAHGNFLYGAKS*
Ga0163111_107468702	3300012954	Surface Seawater	QIIILFEKAVKEIQHGPKWKFVAKNCAHDNFFYGSKSEK*
Ga0163111_121666181	3300012954	Surface Seawater	VKNSFFQIIIFFKKAVKEIQQGSKLKFVAKNYVHGNFFCGSK*
Ga0182082_12621241	3300016771	Salt Marsh	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVRDIF
Ga0181404_10286103	3300017717	Seawater	DEEDEKFIFFLMIILFVKAVKEIQQCPKRKFVAKNFDHGNFFCGSKS
Ga0181417_10964602	3300017730	Seawater	MIILFVKAVKEIQQDPRAKFVAKNDVRGNFFCGPKS
Ga0181421_10436562	3300017741	Seawater	IIFYEKAVKEIQQLTQTIIVAKNGAHDNFFCGPKLQK
Ga0181422_12498682	3300017762	Seawater	SEKFIFQIIILFVKAVKEIQQDPKWKFVAKNCGHGNFFCGPKS
Ga0181422_12558332	3300017762	Seawater	PMKNSFFPIIILFEKAVKEIQHGPKWKFIAKNYGHGNFFYGPKS
Ga0181423_10869732	3300017781	Seawater	LQEVKFLGQCVDQFPMKNSFFPIIILFEKAVKEIQHGPKWKFVAKYYGHGNFFYGPKS
Ga0181379_11955712	3300017783	Seawater	MKNSFFSIIILFEKAVKEIQHSEIGKFVAKNYVHGNFFYGPKS
Ga0181424_101977162	3300017786	Seawater	LKKSSFFLIIILFEKAVKEIQQLLKAKFVAKKYAHDNFFCGPKS
Ga0181565_104333112	3300017818	Salt Marsh	MKNSFFQIIILFKKAVKEIQHSSNWKFVAKKHGHDNFFYAPKSEK
Ga0181552_104355242	3300017824	Salt Marsh	KIHFFQIIIFFKKAVKEIQQGSKLKIVAKNYVHGNFFYGSK
Ga0181582_104749272	3300017958	Salt Marsh	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVRD
Ga0181572_105393651	3300018049	Salt Marsh	FPMKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYAHDIFFCGSKSEK
Ga0181553_107605952	3300018416	Salt Marsh	MKNSFFQIIILFEKAVKEIQHGPKWKFVAKNYVRD
Ga0181564_103056271	3300018876	Salt Marsh	HPLQKAVFRGQSWDQFPMKNSFFQIIILFEKAVKEIQHVLKWKFVAKNYVHDIFFCGSKSEK
Ga0181595_102631412	3300020053	Salt Marsh	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVRDIFFCGSKSEK
Ga0181595_102631462	3300020053	Salt Marsh	MKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVHDIFFCGSKSEK
Ga0181596_103213501	3300020177	Salt Marsh	IIILFEKAVKEIQHGSKWKFVAKNYVHDIFFCGSKSEK
Ga0181604_104549222	3300020191	Salt Marsh	IIFFKKAVKEIQQGSKLKIVAKNYVHDNFFCGSKYEK
Ga0211653_105011692	3300020421	Marine	MKNSFFPIIILFEKAVKEIQHSPKWKFVAKNFAHGNFLYGAKS
Ga0211514_101434332	3300020459	Marine	KFIIFLIIILFQKAVKEIQQGSKLKIVAKKYVHGNFFCGPKYEK
Ga0211514_105323332	3300020459	Marine	KIHFFPIIILFEKAVKEIQHVPKWKFVAKNYGHGNFFYGQKS
Ga0211676_100746304	3300020463	Marine	VKNSFFQIIILFVKAVKEIQHKSKSKFVAKNDAHVNFFCGPKLQK
Ga0206677_102119392	3300021085	Seawater	FPIIILFEKAVKEIQHGPKWKFVAKNYAHDNFFYGSKSEK
Ga0206677_102831012	3300021085	Seawater	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGP
Ga0206683_101163383	3300021087	Seawater	MKNSFFPIIILFEKAVKEIQHGSKRKFVAKNYVRG
Ga0206683_101318332	3300021087	Seawater	QYVDQFLMKNSFFPIIILFEKAVKEIQHGSKRKFVAKNYVRDNFFYGPKS
Ga0206679_107118952	3300021089	Seawater	PISKEKFIFQIIILFENAVKEIQQELQTKFVAKNNAHDNFFCGSKS
Ga0213860_101382552	3300021368	Seawater	MKNSFFQIIILFKKAVKEIQHSSNWKFVAKKHGHDNFFYGPKSEK
Ga0222717_101662702	3300021957	Estuarine Water	HFFPIIILFEKAVKEIQHGPKWKFIAKNYGHGNFFYEPKS
(restricted) Ga0233428_12772781	3300022888	Seawater	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDKFFYGPKS
Ga0255775_10407051	3300022907	Salt Marsh	MKNSFFQIIILFKKAVKEIQHSSNWKFVAKKHGHDNFFL
Ga0255758_101805211	3300022928	Salt Marsh	SMWTNFQRKIHFFQIIIFFKKAVKEIQQGSKLKIVAKNYVHGNFFYGSK
Ga0228665_10583301	3300024235	Seawater	KNSFFPIIILFEKAVKEIQHGPKWKFVAKNCAHDNFFYGSKSEK
(restricted) Ga0233436_10390093	3300024243	Seawater	MKNSFFPIIILFEKAVKEIQHGPKWKFVAKNYVRGN
(restricted) Ga0233435_11685212	3300024252	Seawater	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFF
(restricted) Ga0233441_10499361	3300024260	Seawater	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYG
(restricted) Ga0233439_103853971	3300024261	Seawater	LGPISSEKFIFFLMIILFVKAVKEIQQGPKWKFVAKNCGHGNFFCEPKS
(restricted) Ga0233443_12022102	3300024324	Seawater	HPLQKAMFQGQYVDQFLMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDNFFYGPKS
Ga0228631_11369832	3300024329	Seawater	MKNSFFPIIILFEKAVKEIQHGPKWKFVAKNYDRVNFFYGPKS
Ga0209249_10373553	3300025659	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGN
Ga0209601_11224841	3300025666	Pelagic Marine	IILFEKAVKEIQQLLKAKFVAKKYAHDNFFCGSKS
Ga0209306_10980852	3300025680	Pelagic Marine	SFFLIIILFEKAVKEIQQLLKAKFVAKKYAHDNFFCGPKS
Ga0209374_10872113	3300025705	Marine	MKSSFFPIIILFEKAVKEIHHGLKWKFVAKNYVHDNFFWC
Ga0209666_11038753	3300025870	Marine	LLMIILFVKAVKEIQQGPKWKFVAKNCGHGNFFCGPKS
Ga0209335_104054232	3300025894	Pelagic Marine	MKSSFFPIIILFEKAVKEIQHGLKWKFVAKNYVHD
Ga0209961_10824391	3300026130	Water	ISIEKFIFFSIIILFEKAVKEIQHGSKRKFVAKNYGHDIFFCGSKSEK
Ga0209932_10357752	3300026183	Pond Water	QFPMKNSFFQIIILFEKAVKEIQHGSKWKFVAKNYVHDIFFYGSKSEK
Ga0228620_10459331	3300026483	Seawater	KIHFFPIIILFKKAVKEIHLVEKKFIAKNYTHDNFF
Ga0208946_10717603	3300027207	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVHGNFFYGSKS
Ga0208680_10360841	3300027253	Estuarine	AMFQGQYVDQFLMKNSFFPIIILFEKAVKEIQHGSKRKFVAKNYVRGNFFYGPKS
Ga0208949_10590182	3300027315	Marine	QGLCEDQFPMKNSFFPIIILFEKAVKEIQHGPKWKFIAKNYGHGNFFYGPKS
Ga0233450_101678391	3300028115	Salt Marsh	FPMKNSFFQIIILFKKAVKEIQHSSNWKFVAKKHGHDNFFYGPKSEK
Ga0257118_10477473	3300028173	Marine	MKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS
Ga0257117_10387841	3300028175	Marine	QYVDQFLMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRDNFFYGPKS
Ga0257126_11892422	3300028287	Marine	FFPIIILFEKAVKEIQHGPKRKFVAKNYVRDNFFYGPKS
Ga0233394_10905031	3300028391	Seawater	PIIILFEKAVKEIQHGPKWKFVAKNYAHDNFFYGSKSEK
Ga0315332_107444771	3300031773	Seawater	GQCVDQFPMKNSFFPIIILFEKAVKEIQHGPKRKFVAKNYVRGNFFYGPKS
Ga0315320_108304742	3300031851	Seawater	MKNSFFPIIILFEKAVKEIQHGPKWKFVAKNYVHGNFFCGSKS
Ga0315316_116194982	3300032011	Seawater	GPISKEKFIFQIIILFENAVKEIQQELQTKFVAKNNAHDNFFCGSKS
Ga0315321_106784341	3300032088	Seawater	FPIIILFEKAVKEIQHGSKWKFVAKNYAHDNFFYGSKSEK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters