Metagenome / Metatranscriptome Family F100017

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100017
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	76 residues
Representative Sequence	MKKILKKYRMSNRDDFPTTGCHIHFLRIRAFAGEGINFTEEETAHFDVCRVCRLKVIDALRNLAPLVVCTTMRKAA
Number of Associated Samples	68
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.38 %
% of genes near scaffold ends (potentially truncated)	14.56 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (52.427 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.388 % of family members)
Environment Ontology (ENVO)	Unclassified (33.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.689 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1MRS1b_0340.00002890 22PV_04388290 3ICChiseqgaiiDRAFT_11607912 4F14TC_1004311103 5F14TB_1026366811 6soilH2_104401662 7Ga0062593_1025885152 8Ga0062593_1029198871 9Ga0063356_1003621423 10Ga0063356_1029953861 11Ga0063356_1034474521 12Ga0062591_1029259972 13Ga0062594_1003501791 14Ga0066388_1001544204 15Ga0066388_1011781492 16Ga0066388_1073809881 17Ga0070713_1008466041 18Ga0070681_117215472 19Ga0066905_1004455381 20Ga0066905_1009314822 21Ga0066903_1061109372 22Ga0066903_1075009261 23Ga0066651_101807592 24Ga0075417_101964031 25Ga0075428_1005433691 26Ga0075428_1010825221 27Ga0075431_1002894603 28Ga0075433_101965923 29Ga0075420_1004563371 30Ga0075425_1005983502 31Ga0075425_1010421621 32Ga0075434_1003064182 33Ga0075434_1006057531 34Ga0075434_1012297022 35Ga0075426_105929881 36Ga0075424_1020116481 37Ga0075436_1010648761 38Ga0075418_116615361 39Ga0114129_113250572 40Ga0111538_139463461 41Ga0075423_102655193 42Ga0075423_110576201 43Ga0075423_112845951 44Ga0075423_118995361 45Ga0105340_10567233 46Ga0105252_100904752 47Ga0126382_104561791 48Ga0126382_110102751 49Ga0134088_106378521 50Ga0126370_109381871 51Ga0126376_106762972 52Ga0126376_112011711 53Ga0126377_103410522 54Ga0126377_112950181 55Ga0126377_126221791 56Ga0126379_124912181 57Ga0126379_129714621 58Ga0126379_131983822 59Ga0134124_100248704 60Ga0134124_119623792 61Ga0126383_106645381 62Ga0126383_132241241 63Ga0134121_102539591 64Ga0137776_18680953 65Ga0137313_10756691 66Ga0137323_10444471 67Ga0137319_10236942 68Ga0137459_11423042 69Ga0126375_101770082 70Ga0164301_114652511 71Ga0126369_114761591 72Ga0126369_119057801 73Ga0164305_120872881 74Ga0157307_11537711 75Ga0163162_134673281 76Ga0157380_126256562 77Ga0134089_104817231 78Ga0132258_100685633 79Ga0132258_101312592 80Ga0132258_103755573 81Ga0132258_103976234 82Ga0132258_107807982 83Ga0132258_109113012 84Ga0132258_110871662 85Ga0132258_111697013 86Ga0132258_111809183 87Ga0132258_118719372 88Ga0132258_133168311 89Ga0132258_136404902 90Ga0132257_1035234941 91Ga0132255_1020901061 92Ga0182041_114740362 93Ga0184628_102582673 94Ga0210406_108483642 95Ga0222624_10096161 96Ga0207707_114195491 97Ga0207652_104795022 98Ga0208454_10442801 99Ga0170824_1134258772 100Ga0310813_107211811 101Ga0310813_116968941 102Ga0306920_1029804502 103Ga0326723_0235131_592_795
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1MRS1b_0340.00002890 22PV_04388290 3ICChiseqgaiiDRAFT_11607912 4F14TB_1026366811 5soilH2_104401662 6Ga0062593_1029198871 7Ga0063356_1034474521 8Ga0066388_1001544204 9Ga0066388_1011781492 10Ga0066388_1073809881 11Ga0070713_1008466041 12Ga0070681_117215472 13Ga0066905_1004455381 14Ga0066903_1061109372 15Ga0066903_1075009261 16Ga0075428_1005433691 17Ga0075425_1005983502 18Ga0075425_1010421621 19Ga0075434_1006057531 20Ga0075434_1012297022 21Ga0126370_109381871 22Ga0126376_112011711 23Ga0126379_129714621 24Ga0134124_100248704 25Ga0126383_106645381 26Ga0137776_18680953 27Ga0137313_10756691 28Ga0164301_114652511 29Ga0164305_120872881 30Ga0157307_11537711 31Ga0157380_126256562 32Ga0132258_100685633 33Ga0132258_101312592 34Ga0132258_103976234 35Ga0132258_109113012 36Ga0132257_1035234941 37Ga0132255_1020901061 38Ga0182041_114740362 39Ga0184628_102582673 40Ga0222624_10096161 41Ga0310813_107211811 42Ga0326723_0235131_592_795
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1Ga0134088_106378521 2MRS1b_0340.00002890 32PV_04388290 4ICChiseqgaiiDRAFT_11607912 5F14TC_1004311103 6soilH2_104401662 7Ga0062593_1029198871 8Ga0063356_1034474521 9Ga0066388_1001544204 10Ga0066388_1073809881 11Ga0066905_1004455381 12Ga0066903_1061109372 13Ga0075417_101964031 14Ga0075425_1010421621 15Ga0075434_1006057531 16Ga0075426_105929881 17Ga0075436_1010648761 18Ga0114129_113250572 19Ga0105340_10567233 20Ga0126382_104561791 21Ga0126370_109381871 22Ga0126376_106762972 23Ga0126376_112011711 24Ga0126377_103410522 25Ga0126377_112950181 26Ga0126379_129714621 27Ga0126379_131983822 28Ga0134124_100248704 29Ga0126383_106645381 30Ga0134121_102539591 31Ga0137776_18680953 32Ga0137323_10444471 33Ga0137319_10236942 34Ga0126375_101770082 35Ga0164301_114652511 36Ga0126369_114761591 37Ga0126369_119057801 38Ga0164305_120872881 39Ga0157307_11537711 40Ga0157380_126256562 41Ga0134089_104817231 42Ga0132258_100685633 43Ga0132258_101312592 44Ga0132258_103755573 45Ga0132258_103976234 46Ga0132258_109113012 47Ga0132258_110871662 48Ga0132258_111697013 49Ga0132258_111809183 50Ga0132258_133168311 51Ga0132258_136404902 52Ga0132255_1020901061 53Ga0182041_114740362 54Ga0184628_102582673 55Ga0222624_10096161 56Ga0207707_114195491 57Ga0310813_107211811 58Ga0306920_1029804502 59Ga0326723_0235131_592_795
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.54% β-sheet: 0.00% Coil/Unstructured: 63.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00072	Response_reg	6.80
PF12543	DUF3738	2.91
PF14534	DUF4440	2.91
PF03551	PadR	1.94
PF09900	DUF2127	1.94
PF04964	Flp_Fap	1.94
PF04545	Sigma70_r4	1.94
PF01476	LysM	0.97
PF07690	MFS_1	0.97
PF12531	DUF3731	0.97

Showing 1 to 10 of 22 entries

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COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.94
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.94
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.94
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.94
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.97
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.97
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.97
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.97
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	47.57 %
Unclassified	root	N/A	52.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	47.57 %
Unclassified	root	N/A	52.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.57 %
Unclassified	root	N/A	52.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.83 %
Unclassified	root	N/A	52.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.97 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.94 %
Unclassified	root	N/A	52.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.94 %
Unclassified	root	N/A	52.43 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.97 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.97 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.97 %
Unclassified	root	N/A	52.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.97 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.97 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.97 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.97 %
Unclassified	root	N/A	52.43 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.97 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.97 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.97 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.97 %
Unclassified	root	N/A	52.43 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.97 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.97 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.97 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.97 %
Unclassified	root	N/A	52.43 %
Undibacterium sp. YM2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. YM2	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.97 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.97 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.97 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.97 %
Unclassified	root	N/A	52.43 %
Undibacterium sp. YM2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. YM2	0.97 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_5879360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1638	Open in IMG/M
2170459014\|G1P06HT01DVEUZ	Not Available	663	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1160791	Not Available	502	Open in IMG/M
3300000559\|F14TC_100431110	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300001431\|F14TB_102636681	Not Available	798	Open in IMG/M
3300003324\|soilH2_10440166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M
3300004114\|Ga0062593_102588515	Not Available	576	Open in IMG/M
3300004114\|Ga0062593_102919887	Not Available	546	Open in IMG/M
3300004463\|Ga0063356_100362142	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300004463\|Ga0063356_102995386	Not Available	728	Open in IMG/M

Showing 1 to 10 of 103 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.97%
Environmental	Environmental	59.22%
Host-Associated	Host-Associated	39.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	9.71%
Plants	Host-Associated → Plants	39.81%
Solid Waste	Engineered → Solid Waste	0.97%
Terrestrial	Environmental → Terrestrial	49.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Grass	Engineered → Solid Waste → Grass	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.36%
Sediment	Environmental → Aquatic → Sediment	7.77%
Soil	Environmental → Terrestrial → Soil	48.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%
Loam	Environmental → Terrestrial → Soil → Loam	12.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	14.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	14.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	13.59%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.39%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.97%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.80%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M

Showing 1 to 10 of 68 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0340.00002890	2162886011	Miscanthus Rhizosphere	MKKCRLNNRVDFPRPGNHIPLLRILEFASDSMAFTEKEDAHFDVCRVCRLKVIEKLKNLVAPVPAVCGTVCGTAMRKAA
2PV_04388290	2170459014	Switchgrass, Maize And Mischanthus Litter	IARDDFSITERHIHFLSIHAFVSEGVDFTEEENAHFDACRHCRLKVIDAIRSLPPLVVPTITTKAA
ICChiseqgaiiDRAFT_11607912	3300000033	Soil	MKKILTKYRTSNRDDSRMPGRHIHFLRIRAFASEGIIFTEEENAHFDVCRVCRLTVIDALRNLPLVVCSAMSKAA*
F14TC_1004311103	3300000559	Soil	MKILKKHRVMSNRDDFPMAGRHIHFLRIRAFASEGINFTEKENVHFDVCRVCRLKVIDALRNLAPLLVCTNIPKAA*
F14TB_1026366811	3300001431	Soil	MKILKKHRVMSNRDGFPMAGRHIHFLRIRAFASEGINFTEKENAHFDVCSVCRLKLVDALRNLAPXXXCTNIPKAA*
soilH2_104401662	3300003324	Sugarcane Root And Bulk Soil	MKKILNKDPLSKGDDFPRTGRHIQLLRILAFASESINFTEDENAHFDACRDCRLKVIDALRNLTGVAPAGSPEEDVKYR*
Ga0062593_1025885152	3300004114	Soil	MKKILTKYRTSNRDDSPMPERHIHFLRIRAFASEGIIFTEEENAHFDVCRVCRLTVIDALRNLPLVVCSAMSKAA*
Ga0062593_1029198871	3300004114	Soil	MKKLLKKHGVTGNRVDFPKTGRHIHFLRILAFASEGINFTEKEDAHFDICRSCRLKVIVALRNLSPLVAPITTMAKAA*
Ga0063356_1003621423	3300004463	Arabidopsis Thaliana Rhizosphere	MKKCRLNNRVDFPRPGNHIPLLRILEFASDGMAFTEKEDAHFDVCRVCRLKVIEKLKNLAAPVPAVCGTVCGTAMRKAA*
Ga0063356_1029953861	3300004463	Arabidopsis Thaliana Rhizosphere	MKKILTKYRTSNRDDSPMPGRHIHFLRIRAFASEGIIFTEEENAHFDVCRVCRLTVIDALRNLPLVVCSAMSKAA*
Ga0063356_1034474521	3300004463	Arabidopsis Thaliana Rhizosphere	MNKLLKRDRVMGNRDEVPMIERHIHSLRVRAFASEGIDFTEIEDAHFDECRLCRLRVIDALRNLETMVAA
Ga0062591_1029259972	3300004643	Soil	MKKCRLNNRVDFPRPGNHIPLLRILEFASDSMAFTEKEDAHFDVCRVCRLKVIEKLKNLVAPVPAVCGTVCGTAMRKAA*
Ga0062594_1003501791	3300005093	Soil	MKKCRLNNRVDFPRPGNHIPLLRILEFASDGMAFTEKEDAHFDVCRVCRLKVIEKLKNLTAPVPAVCGTVCGTAMRKAA*
Ga0066388_1001544204	3300005332	Tropical Forest Soil	MKNLLTKYHAMSNRDDVPVTGPHIHALRIRAFAIEGINFTEKENAHFDVCGVCRFAVLDALRNLAPLVVQIAMRKAA*
Ga0066388_1011781492	3300005332	Tropical Forest Soil	MNKKLKKYRIVSYRDDFPITGRHIHSLRVRAFATAGMSRFTEKENAHFDACRVCRLKVLDAIKNLMPMGVPTMPKAA*
Ga0066388_1073809881	3300005332	Tropical Forest Soil	MKKILKKYRVMSNRDDFSMTGRHIHLLRFHAFASEGSDFTGKETAHFDACRVCRLKVIDALRNLAPLMGMYPTTAKAA*
Ga0070713_1008466041	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKEILKKHRGMSNRDDFPMTGGHIHSLRIRAFANEDIEFTEKEDAHFDVCRRCRLKVIEAIRNLSPPVVRTAMPKAA*
Ga0070681_117215472	3300005458	Corn Rhizosphere	MNKILNKDRLSDEFAITGRHIHLLRILAFASESINFTEEENAHFDVCRDCRLKVINALRNLTGVVRAGSNTTMKAA*
Ga0066905_1004455381	3300005713	Tropical Forest Soil	MKKLLKKYRVMSNRDDFPLREHHIHSLRIRAFANEGINFTDKEDAHFDVCRVCRLKVLDSLRNPPPLVVCITMRKAA*
Ga0066905_1009314822	3300005713	Tropical Forest Soil	MKNLLAKYHAMSNRDDVPVTGPHIHALRIRAFAIEGINFTEKENAHFDVCGVCRFAVLDALRNLAPLVVQIAMRKAA*
Ga0066903_1061109372	3300005764	Tropical Forest Soil	MKNTLEKYHLMSTRDDFPMTGCHIHPLRIRAFASECIDFTEKENAHFDVCRVCQLKLIDAVRDVESQVVRTIMPKAA*
Ga0066903_1075009261	3300005764	Tropical Forest Soil	MKKTKKYREKSARDDFSTTGRHIHLLRIHAFVSEGVEFTEEEDAHFDVCRNCRLKVIDALRTLAPHVVG
Ga0066651_101807592	3300006031	Soil	MKKLLKKYRVLSNRDDLPMTGRHIHSLRIRAFASEGINFTDEEATHFDVCRVCRINVLHALRNLAPLVVCTTMPKAA*
Ga0075417_101964031	3300006049	Populus Rhizosphere	MKKLLKKYRVLSNRDDLPMTGRHIHSLRIRAFANEGINFTDQETTHFDVCRVCRINVLHALRNLAPLVVCTTIPKAA*
Ga0075428_1005433691	3300006844	Populus Rhizosphere	MKKILKQCRLSNRDVFPMTGSHIHLLRILEFASDGITFTEKETAHFDVCRVCRLKVIDKLRNLAPLVPAVCGTAMRKAA*
Ga0075428_1010825221	3300006844	Populus Rhizosphere	MKKILTKYRTSNRDDSAMPGRHIHFLRIRAFASEGIIFTEEENAHFDVCRVCRLTVIDALRN
Ga0075431_1002894603	3300006847	Populus Rhizosphere	MTGSHIHLLRILEFASDGITFTEKETAHFDVCRVCRLKVIDKLRNLAPLVPAVCGTAMRKAA*
Ga0075433_101965923	3300006852	Populus Rhizosphere	MKKLLKKYRVLSNRDDLPMTGRHIHSLRIRAFANEGINFTDEETTHFDVCRVCRINVLHALRNLAPLVVCTTIPKAA*
Ga0075420_1004563371	3300006853	Populus Rhizosphere	MKKILKQCRLSNRDVFPMTGSHIHLLRILEFASDGITFTKKETAHFDVCRVCRLKVIDKLRNLAAPVPAVCGTAMRKAA*
Ga0075425_1005983502	3300006854	Populus Rhizosphere	MKKILKKYRVMSTRDDFSMTGRHIYLLRIRAFASKGINFTDKENAHFDVCRVCRLKVIDALRNLALQVPTIMPKAA*
Ga0075425_1010421621	3300006854	Populus Rhizosphere	MKKILKKFRVMSTRDDFPMTGRHIHFLRIRAFASEGIDFTEKESAHFDVCHVCRLKVIDALRNLALAPG*
Ga0075434_1003064182	3300006871	Populus Rhizosphere	MKKILKKYRVMSTRDDFSMTGRHIHFLRIRAFASKGINFTDKENAHFDVCRVCRLKVIDALRNLALQVPTIMPKAA*
Ga0075434_1006057531	3300006871	Populus Rhizosphere	MKKILKKHHRSNLYDFAMRGRHIDFLRIRAFASEGINFTEEETVHFDVCRVCRLNVIDALRNLADEVPAVCGTTMRKAA*
Ga0075434_1012297022	3300006871	Populus Rhizosphere	MKKIEKSGVMSTSDDFPMTERHIHFLRIRAFSIEGIKFTEKENAHFDICRVCRLKVIDAVKNLGPQVHAIMQKAA
Ga0075426_105929881	3300006903	Populus Rhizosphere	MKKILKKYRVMSTRDDFSMTGRHIHFLRIRAFASKGINFTDKENAHFDVCRVCRLKVIDALRNLALQVPTTMPKAA*
Ga0075424_1020116481	3300006904	Populus Rhizosphere	MKKILKKHHTSNLYDFAMRGRHIDFLRIRAFASEGINFTEEETVHFDVCRVCRLNVIDALRNLADEVPAVCGTTMRKAA*
Ga0075436_1010648761	3300006914	Populus Rhizosphere	MKKILKKYRMSNRDDFPMTGRHIHFPRIRAFASEGFNFTEEEAAHFDVCCVCRLKVIDGLRTLAPLVVCTTMPKAA*
Ga0075418_116615361	3300009100	Populus Rhizosphere	MKKILKQCRLSNRDVFPMTGSHIHLLRILEFASDGITFTEKETAHFDVCRVCRLKVIDKLRNLAPLV
Ga0114129_113250572	3300009147	Populus Rhizosphere	MKKILKQCRLSNRDVFPMTGSHIHLLRILEFASDGITFTEKETAHFDVCRVCRLKVIDKLRNLEPLVPAVCGTAMRKAA*
Ga0111538_139463461	3300009156	Populus Rhizosphere	MKKIEKSGVMSTSDDFPMTERHIHFLRIRAFSIEGIKFTEKENAHFDICRVCRLKVIDAVKNLGPQVHAIMQKA
Ga0075423_102655193	3300009162	Populus Rhizosphere	MKKLLKKYRVLSNRDDLPMTGRHIHSLRIRAFANEGINFTDEETTHFDVCRVCRINVLHAPRNLAPLVVCTTMPKAA*
Ga0075423_110576201	3300009162	Populus Rhizosphere	TNWRQVMKKILKKFRVMSTRDDFPMTGRHIHFLRIRAFASEGIDFTEKESAHFDVCHVCRLKVIDALRNLALAPG*
Ga0075423_112845951	3300009162	Populus Rhizosphere	MKKILEKHRVMSNRDDFPMAGRHIHFLRIRAFASEGINFTEKENAHFDVCRVCRLKVIDGLRRLAPLVGCTTMPKAA*
Ga0075423_118995361	3300009162	Populus Rhizosphere	MKKILKKFRVMSTRDDFPMTGRHIHFLRIRAFAGEGINFTEKESAHFDVCRVCRLKVIDALRNLVPGVVRTIMPKAA*
Ga0105340_10567233	3300009610	Soil	MNKLLKKYRVMSNRDDSPMTGGHIHSLRIRAFASEGINFTEKETAHFDVCRVCRLKVRDALRNLAPRPTMSKAA*
Ga0105252_100904752	3300009678	Soil	MKKILTKNRTSNRLDFPMPERHIQFLRILAFASEGIDFTEEEDAHFDVCRVCRLKVIDALRNRTPLVVCTNMSKAA*
Ga0126382_104561791	3300010047	Tropical Forest Soil	MNKKLKKYRIVSYRDDFPITGRHIHSLRVRAFATAGMSRFTEKENAHFDACRVCRLKVLDALKNLTPVGVPTMPKAA*
Ga0126382_110102751	3300010047	Tropical Forest Soil	MKKLLKKYRVMSNRDDFPLREHHIHSLRIRAFANEGINFTDKEDAHFDVCRACRLKVLDSLRNLPPLVVCITMRKAA*
Ga0134088_106378521	3300010304	Grasslands Soil	MKKILKKYRMSNRDDFPTTGCHIHFLRIRAFAGEGINFTEEETAHFDVCRVCRLKVIDALRNLAPLVVCTTMRKAA*
Ga0126370_109381871	3300010358	Tropical Forest Soil	MKEILKKYRVMGNDDDLPLTGPHIHSRRIHAFASEGIDFTEKENAHFDACRVCRLNVIDALRNLAPLVGVICVYPAMPKAA*
Ga0126376_106762972	3300010359	Tropical Forest Soil	MKKILKNYRMSNRDDFPMTGRHIHLLRIRAFASDGINFTEKETAHFDVCRVCRLRVLDALRNLAPQVVRTITPKAA*
Ga0126376_112011711	3300010359	Tropical Forest Soil	VMLKKYRMSNRDDFPMAGRHIHFLRIRAFVSEGIDFTEEETAHFDECFPCRLKVVDALRNLASGGPPVCDTTKEKAA*
Ga0126377_103410522	3300010362	Tropical Forest Soil	MKKILKKHRVVSNRDDFPMAGRHIHFLRIRAFASEGINFTEEENAHFDVCRVCRLKVIDALRTLAPLVVCTTMSKAA*
Ga0126377_112950181	3300010362	Tropical Forest Soil	MKKILKKCRVMSSRDDFPMTGRHIHFLRIRAFASEEINFTEKETDHFDVCRVCRLKVIDALRNLAPQFVCTIMLKAA*
Ga0126377_126221791	3300010362	Tropical Forest Soil	HAMSNRDDVPVTGPHIHALRIRAFAIEGINFTEKENAHFDVCGVCRFAVLDALRNLAPLVVQIAMRKAA*
Ga0126379_124912181	3300010366	Tropical Forest Soil	MSNRDDLPLTGPHIHSLRIHAFAIEGIDFTEKENAHFDACRVCRLNVIDALRNLAPLVGVICVYPAMPKAA*
Ga0126379_129714621	3300010366	Tropical Forest Soil	MKKILKKHHVMSNRDDFPMTGRHIHSLRILAFATERINFTEKESAHLDVCRLCRLKVIDALRNVASLAALVGA*
Ga0126379_131983822	3300010366	Tropical Forest Soil	MKKILKKYRVMSTPADLPMTGSHIHFLRIRAFASEGINFTERETAHFDVCRVCRLKVIDALRNPAPQVIRTIIPKCA*
Ga0134124_100248704	3300010397	Terrestrial Soil	MKNVRRELRVVSTRDDFPMTAAHIDFLRICAFAREGIDFTKKESAHFDVCRECRLKVIDALRNLEPQEVRTIMPMAA*
Ga0134124_119623792	3300010397	Terrestrial Soil	LNNRVDFPRPGNHIPLLRILEFASDSMAFTEKEDAHFDVCRVCRLKVIEKLKNLVAPVPAVCGTVCGTAMRKAA*
Ga0126383_106645381	3300010398	Tropical Forest Soil	MEKILKKYRMINRDDFPMTGRHIHILRIRAFADEGINFTEEETAHFDVCRDCRLEVIDALKKLADPIPSICGITMGKAA*
Ga0126383_132241241	3300010398	Tropical Forest Soil	MKKILKKYRMSNRDDFPMTGRHIHLLRIRAFASDGINFTEKETAHFDVCRVCRLKVLDALRNLAPQVVRTITPKAA*
Ga0134121_102539591	3300010401	Terrestrial Soil	MKKILKKFRVMSIREDFPMTGHHIHFPRIRAFASEGINFTEKESDHFDVCRRCRLKVIDAIRNPWRPRS*
Ga0137776_18680953	3300010937	Sediment	MKKNKQYREESARDDFATSGRHLDLLRIHAFVSEGIDFTEEENAHFDVCRNCRLTVIDALRTLAPQVCTITTKAA*
Ga0137313_10756691	3300011403	Soil	MKKILTKNRTSNRLDFPMPERHIQFLRILAFASEGIDFTEEEDAHFDVCRVCRLKVIDALRNRTPM
Ga0137323_10444471	3300011409	Soil	MKKLLKEFRVVSNRDDFPMTERHIHSLRIRDFASEKINFTGKEAVHFDVCRVCRLKVIDALRNLTPLVVSTTMSKAA*
Ga0137319_10236942	3300012167	Soil	MKKILTKSRTSNRVDFPMPERHIQFLRILAFASEGIDFTEEEDAHFDVCRVCRLKVIDALRNRTPLVVSTNMSKAA*
Ga0137459_11423042	3300012228	Soil	MNKPLKKYRVMSNRDDFLMAGRHIHSLRIRAFASEGINFTEKETAHFDVCRVCRLKVRDALRNLAPRPTMSKAA*
Ga0126375_101770082	3300012948	Tropical Forest Soil	MKKILKKYRMSNRDDFPMTGRHIHFLRIVAFASEGINFTEEEDAHFDVCRACRVKVIDALRKLPALVPAVCGTTMRKVA*
Ga0164301_114652511	3300012960	Soil	MVNGSFNRRQVMKKILKKFRVMSTCDNFPTRRHIHSLRIRAFASEGINFTEKETAHFDACRVCRVKVLDALRNLGLMVVYITMPKAA*
Ga0126369_114761591	3300012971	Tropical Forest Soil	MKKTLKKYRMINRDDFPVTGFHIHVLRIRAFANEGINFTEEEDSHFDVCRDCRLEVIDALKKLADPLPSVSGTTMGKAA*
Ga0126369_119057801	3300012971	Tropical Forest Soil	MKNTNKYREKSARDDFSTTGRHIHLLRIHAFVSEGVDFTEEEDAHFDVCRNCRLKVIDALRTLAPQVVLTITKKAA*
Ga0164305_120872881	3300012989	Soil	MKKILKKYRKSNRDNFAMTGRHIHFLRIGAFASEGINFNEEETAHFDACRICRLEVIHALKNLADGFPIDCDTTMPKAA*
Ga0157307_11537711	3300013096	Soil	KKLLKKYRVMSNRDDLPMTERHIHSLRIRGFASERINFTEREAGHFDVCRICRLKVLNELKNRARLIVRTSMPKAV*
Ga0163162_134673281	3300013306	Switchgrass Rhizosphere	MKKCRLNNRVDFPRPGNHIPLLRILEFASDGMAFTEKEDAHFDVCRVCRIKVIEKLKNLVAPVPAVCGTVCGTAMRKAA*
Ga0157380_126256562	3300014326	Switchgrass Rhizosphere	MNKRLEQNRVISNRDHFSVTGPHIHSLRIRAFASEGINFTEEENSHFDVCRVCRLKVLDALRNLGLLIVPTTMSKAA*
Ga0134089_104817231	3300015358	Grasslands Soil	MKKILKKHRVMSNRDDFPMAVRHIHFLRIRAFASEGINFTEKESAHFDVCRLCRLKVIDALRNLAPGVVRTIMPKAA*
Ga0132258_100685633	3300015371	Arabidopsis Rhizosphere	MNKTLKEYPVVSTRDDFPVAGRHIHFLRILAFANESVNFTDKEDAHFDDCRICRLKVIHTLRSLAPRPVRIVVAKAA*
Ga0132258_101312592	3300015371	Arabidopsis Rhizosphere	MKKILKKYRAMSTRDDFLLTGFHIRFLRICAFANESIDFTKEENAHFEDCRLCRLKVIHALRNLAQLDVPATMTKAA*
Ga0132258_103755573	3300015371	Arabidopsis Rhizosphere	MKEILKKHRGMSNRDDFPMTGGHIHSLRIRAFANEDIEFTEKEDAHFDVCRFCRLKVIEAIRDLPPPVVRTTMPKAA*
Ga0132258_103976234	3300015371	Arabidopsis Rhizosphere	MKEILKKHRVMSDSDDFPMAGRHIRSLRILAFASEGIHFTDRETAHFDVCRVCRLKVIDALRKLPPLVVGTATAKAA*
Ga0132258_107807982	3300015371	Arabidopsis Rhizosphere	MKKCRLSNRVDFPRPGNHIPLLRILEFASDGMAFTEKEDAHFDVCRVCRLKVIEKLKNLTAPVPAVCGTVCGTAMRKAA*
Ga0132258_109113012	3300015371	Arabidopsis Rhizosphere	MKRLLKEYRVVSNRDDFPMTERHIHPLRIRDFASEKINLTGKEAVHFDVCRFCRFKVRNALRNRMPKAA*
Ga0132258_110871662	3300015371	Arabidopsis Rhizosphere	MKKLLKKSRAMSNRHDFPMAGPHIHSLRIRAFAIESIDFTEKEDAHFDACRVCRLDLLDALRNLAPLVVQITMRKAA*
Ga0132258_111697013	3300015371	Arabidopsis Rhizosphere	MKKILKKFRVMSTHDDSPITGRHIHFLRIRSFASEGINFTEKENAHFDLCRSCRLKVIDALRNLAPRVVRTLAS*
Ga0132258_111809183	3300015371	Arabidopsis Rhizosphere	MKKIEKSGVMSTSDDFPMTERHIHFLRIRAFSIEGIKFTEKENAHFDICRVCRLKVIDAVKNLGPQVHAIMQKAA*
Ga0132258_118719372	3300015371	Arabidopsis Rhizosphere	MKKLLKKYRVLSNGDDLPMTGRHIHSLRIRAFASEGINFTDEETTHFDVCRVCRINVLHALRNLAPLVVCTTMPKAA*
Ga0132258_133168311	3300015371	Arabidopsis Rhizosphere	MKKLLKKYRVMSNRGHFPMTERHIHSLRIRAFASERINFTEKEAGHFDACRICRLNVLNALKNRARLIIRTSMPKAV*
Ga0132258_136404902	3300015371	Arabidopsis Rhizosphere	MNKLLKNHRVMSNRDDSPMTGRHIHSLRIRAFASVSEGINFTEKENAHIDVCRVCRLKLVDALRNAPTTTMPKAA*
Ga0132257_1035234941	3300015373	Arabidopsis Rhizosphere	MKKIEKSGVMSTSDDFPMTERHIHFLRIRAFSIEGIKFTEKENAHFDICRVCRLKV
Ga0132255_1020901061	3300015374	Arabidopsis Rhizosphere	MNKLHKKYRVIGNGDDFPMTGPHIHSLRIRAFASEGVNFTEEEDAHFDACRLCRLEMIEALKNLTPVVVTTTVSKAA*
Ga0182041_114740362	3300016294	Soil	MKKILKKHHVMSNRDDFPMTGRHIHSLRIHAFASEGIHFTEKETTHFDVCRACRLKVIDALRNWASLVGTYSTNAEGCLNTGSD
Ga0184628_102582673	3300018083	Groundwater Sediment	MNKQLKKYRLMSDRDDFPRTERHIHSKRIRAFASDGINFTEKEDAHFDVCRVCRLKVVDALRKHLAPLVVSTTMSKAA
Ga0210406_108483642	3300021168	Soil	MKKILKKYRGMSNRDDFPMTGRHIHSLRIRAFANEDIEFTEKEDAHFDVCRPCRLKVIDAIRNLPPPVVRTTMPKAA
Ga0222624_10096161	3300021951	Groundwater Sediment	MNKRLKKRRVKSNRDDFPMTGRHIHSQRIRAFASASEGINFTEKENAHFDVCSVCRLKLVDALRNVSTTIKPKAA
Ga0207707_114195491	3300025912	Corn Rhizosphere	MNKILNKDRLSDEFAITGRHIHLLRILAFASESINFTEEENAHFDVCRDCRLKVINALRNLTGVVRAGSNTTMKAA
Ga0207652_104795022	3300025921	Corn Rhizosphere	MNKILNKDRLSDEFAITGRHIHLLRILAFASESINFTEEENAHFDVCRDCRLKVINALRNLTG
Ga0208454_10442801	3300027573	Soil	MKKILTKNRTSNRLDFPMPERHIQFLRILAFASEGIDFTEEEDAHFDVCRVCRLKVIDALRNRTPLVVCTNMSKAA
Ga0170824_1134258772	3300031231	Forest Soil	MKKILKKYRKSNRDHFAMTGGHIHFLRIGAFASEGINFNEEETAHFDVCRVCRLEVIHALKNLADGVPFDCDSTMPKAA
Ga0310813_107211811	3300031716	Soil	MKSILKRFRVMSTPDDVPMTGDHIDFLRISAFAGECINFTEKENAHFDLCRFCRLGLIDALNNLSQAERGIMAKAA
Ga0310813_116968941	3300031716	Soil	MKEILKKHRGMSNRDDFPMTGGHIHSLRIRAFANEDIEFTEKEDAHFDVCRLCRLKVIEAIRNQSPPVVRTAMPKAA
Ga0306920_1029804502	3300032261	Soil	MKKILKKHHVMSNRDDFPMTGRHHIHSLRIRAFATEDINFTEKETAHLEVCRACRLKVIDALRKRASLEGTYSTMQKVP
Ga0326723_0235131_592_795	3300034090	Peat Soil	MSNPHDFSMEERHIHSMRIRAFASESINFTEKEAAHFDVCRVCRLKVHDALRNPAPLIVRARMRKTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters