NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F099917

Metagenome Family F099917

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099917
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 148 residues
Representative Sequence ADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR
Number of Associated Samples 93
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 17.48 %
% of genes from short scaffolds (< 2000 bps) 15.53 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (81.553 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(15.534 % of family members)
Environment Ontology (ENVO) Unclassified
(49.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.631 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200
1Ga0062593_1023761561
2Ga0063455_1006106751
3Ga0062589_1024534481
4Ga0062590_1017748482
5Ga0063356_1056049051
6Ga0062592_1014647702
7Ga0062591_1016068501
8Ga0070690_1001477511
9Ga0066388_1053667262
10Ga0066388_1082324571
11Ga0070680_1006027772
12Ga0070680_1014857381
13Ga0068868_1022640981
14Ga0070691_106235642
15Ga0070675_1012741202
16Ga0070673_1014375502
17Ga0070714_1008835062
18Ga0070713_1023560771
19Ga0070705_1009620821
20Ga0070694_1008320792
21Ga0070699_1004258373
22Ga0073909_102489511
23Ga0070679_1011291251
24Ga0070695_1000634011
25Ga0070696_1000996564
26Ga0070696_1006058972
27Ga0070693_1007900131
28Ga0070704_1016007501
29Ga0070717_104853431
30Ga0066656_110043151
31Ga0070715_104719102
32Ga0070716_1001950022
33Ga0070716_1006908521
34Ga0070712_1000929671
35Ga0075367_104408691
36Ga0079222_116318171
37Ga0075433_111647031
38Ga0075425_10000357418
39Ga0075425_1007202272
40Ga0075425_1019495061
41Ga0075434_1013358452
42Ga0075424_1013333542
43Ga0075424_1022629871
44Ga0075418_104878912
45Ga0105243_130645441
46Ga0126380_100720777
47Ga0134084_101954492
48Ga0126370_107980071
49Ga0105239_115092601
50Ga0134124_109815031
51Ga0134124_122514241
52Ga0134122_102167061
53Ga0134122_107806582
54Ga0134121_101631834
55Ga0134123_104285931
56Ga0134123_124440712
57Ga0138514_1000628872
58Ga0157321_10434721
59Ga0157303_100383531
60Ga0157292_102753001
61Ga0157306_100034566
62Ga0157302_103785272
63Ga0157310_100543331
64Ga0126375_102120443
65Ga0164300_109289581
66Ga0164298_103158752
67Ga0164309_101150383
68Ga0157378_115548161
69Ga0157372_102802823
70Ga0173483_107526311
71Ga0173478_103925572
72Ga0132258_102558657
73Ga0193724_10340561
74Ga0247793_10012256
75Ga0247752_10013251
76Ga0247686_10447851
77Ga0247669_10594581
78Ga0247687_10085022
79Ga0207688_107044492
80Ga0207699_102266331
81Ga0207660_115399721
82Ga0207652_106831412
83Ga0207664_108335492
84Ga0207670_117890501
85Ga0207678_101663913
86Ga0207636_10052761
87Ga0209966_10301782
88Ga0209073_102335521
89Ga0247684_10068963
90Ga0307317_102162241
91Ga0307316_103136511
92Ga0307302_105746902
93Ga0307310_106874592
94Ga0307501_102469111
95Ga0310887_109512271
96Ga0307468_1024368771
97Ga0310904_111829521
98Ga0310900_102394973
99Ga0310890_105070761
100Ga0310895_106140161
101Ga0307472_1009633661
102Ga0314864_0044969_515_994
103Ga0373950_0154615_138_524
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.32%    β-sheet: 0.00%    Coil/Unstructured: 35.68%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120140ADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
18.4%81.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Soil
Soil
Agricultural Soil
Soil
Soil
Hardwood Forest Soil
Soil
Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Soil
Arabidopsis Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Endosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
15.5%6.8%2.9%5.8%3.9%4.9%15.5%4.9%7.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062593_10237615613300004114SoilEQTESRADDIQRIVVLAVPVIRLMARGARVAKVPWVFVASTAVAVGVAVRTGVREVQVLSSLVAYRLEQATGEQADPALVKKVAVDVYLHPKRKLLLRDDKLHVVRLTRKWLLGGMIGRNTEKRANRALAAAERLDAATLAESWETMRRRR*
Ga0063455_10061067513300004153SoilTAVGVGVAVRTGVREIQVLSSLVAHQLEQATGAPADPALVKKLAIDLYLHPKRKLALSDDKLHLVRLTRKWLLGGMFGRNTDRRANQALAAAERLDAAALAASWDTVRRRRTVDEPRLAGESGLQRTQS*
Ga0062589_10245344813300004156SoilALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGGGA*
Ga0062590_10177484823300004157SoilQRIVLLAVPVVRVLARGARVVKLPWVVIASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKKAAIDLYLHPKRQVRLGDDKLHLVRLTRKWVLGGIFGRKTKKRANRALAAAERVDLGALAASWNSERRSR*
Ga0063356_10560490513300004463Arabidopsis Thaliana RhizosphereALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA*
Ga0062592_10146477023300004480SoilLARGARVVKLPWVVIASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKKVAIDLYLHPKRQVRLSDDKLHLVRLTRKWVLGGIFGRKTKKRANRALAAAERVDLGALAASWNSERRSR*
Ga0062591_10160685013300004643SoilTESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGAPADPALVKKVAIELYLHPKRKLLLRDDRLHLVRLTRKWVLGGMIGRKTEKRANRALAAAERLDSATLAESWETVRRR*
Ga0070690_10014775113300005330Switchgrass RhizosphereESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDTGRRRRAADEHERRSRQS*
Ga0066388_10536672623300005332Tropical Forest SoilALARGAKFAKVPWVIVGSTAISVGVAVRTGAREIQVLSALVAHRLEQATGAPADPALVKKLALDLYLHPKRKPRLTDDKLHLVRLTRKWVLGGMFGRTTAKRADRALAAAERLDPAALVESWDSVPRRKRSAV*
Ga0066388_10823245713300005332Tropical Forest SoilLLVGDEQTESLAEDIQRVIVLAVPVLRALARGARFVKLPWVIVGSTAISVGIAVRTGVREIQVLSSLVAHRLEQATGAPADPALVKKAALDLYLHPRRKLRPTDDKLHLVRLTRKWVLGGIFGRKTAERANRALDAAERLDAAALAASWDSVRRRADE*
Ga0070680_10060277723300005336Corn RhizosphereTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVRDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0070680_10148573813300005336Corn RhizosphereAEGTRLLAKDEETESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0068868_10226409813300005338Miscanthus RhizospherePWVIVGSTAVAVGVAVRMGVREIQVLSSLVAHRLEQATGAPPDPALVEKMAIDLYLHPKRKLVLTDDKLHLVRLTRKWMLAGMLGRNTEKRASRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070691_1062356423300005341Corn, Switchgrass And Miscanthus RhizosphereARRLLAGDEQAESVADDIQRVVVLAVPVVRAFARGARLVKLPWVIVASSAISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPTLVKKVTLDLYLHPKRKLNPTDHKLHLVRLTRKWVLGGIFGRETTKRAHRALAAAERLDPAAIAASWDRARRR*
Ga0070675_10127412023300005354Miscanthus RhizosphereRRLLAGDEQAESVADDIQRVVVLAVPVVRAFARGARLVKLPWVIVASSAISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPALVKKVTLDLYLHPKRKLNPNDHKLHLVRLTRKWVLGGIFGRETTKRAHRALAAAERLDPAAIAASWDRARRR*
Ga0070673_10143755023300005364Switchgrass RhizosphereAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTQKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070714_10088350623300005435Agricultural SoilAVAVGVAVRTGTREIQVLSSLVAHRLEQSTGEPADPALVKKVAIDLYLHPKRKLLLKDDKLHLVRLTRKWLLGGMFGRKSDKRANRALTAAERLDPATLAESWEAVRRRQ*
Ga0070713_10235607713300005436Corn, Switchgrass And Miscanthus RhizosphereQTESRADDIQRIVVLAVPVIRALSRGARVAKFAKVPWVFVASTAVAVGVAVRTGTREIQVLSSLVAHRLEQSTGEPADPALVKKVAIDLYLHPKRKLLLKDDKLHLVRLTRKWLLGGMFGRKSDKRANRALTAAERLDPATLAESWEAVRRRQ*
Ga0070705_10096208213300005440Corn, Switchgrass And Miscanthus RhizosphereVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070694_10083207923300005444Corn, Switchgrass And Miscanthus RhizosphereQRIIVLAIPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070699_10042583733300005518Corn, Switchgrass And Miscanthus RhizosphereKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0073909_1024895113300005526Surface SoilESRADDIQRIIVLAVPVIRVLARGARVVKVPWVIVGSTAVAVGVAVRTGVREIQVLSSLVAHRLEQATGAPADPALVEKAAIDLYLHPKRKLVLTDDKLHLVRLTRKWVLGGILGRKTEKRADRALAAAERLDAAMLAASWDTVRHRRAVEPPPTISARGAENKP*
Ga0070679_10112912513300005530Corn RhizosphereTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0070695_10006340113300005545Corn, Switchgrass And Miscanthus RhizosphereADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070696_10009965643300005546Corn, Switchgrass And Miscanthus RhizosphereESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPPDPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0070696_10060589723300005546Corn, Switchgrass And Miscanthus RhizosphereDEETESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070693_10079001313300005547Corn, Switchgrass And Miscanthus RhizosphereTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTGKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070704_10160075013300005549Corn, Switchgrass And Miscanthus RhizosphereESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTQKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070717_1048534313300006028Corn, Switchgrass And Miscanthus RhizosphereQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDTGRRRRAADEHERRSRQS*
Ga0066656_1100431513300006034SoilAAEGRRLLAGDEQTESLAEDIQRVVVLAVPVLRALARGARFVKLPWVIVGSTAISVGVAVRTGVREIQVLSSLVAHRLEQGTGGPADPALVKKVALDLYLHPKRKLRPTDDKLHLVRLTRKWVLGGIAGRKTAKRANQALAAAERLDSAALTASWDSVRRRADEPPPRASGAR*
Ga0070715_1047191023300006163Corn, Switchgrass And Miscanthus RhizosphereRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070716_10019500223300006173Corn, Switchgrass And Miscanthus RhizosphereRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPPDPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0070716_10069085213300006173Corn, Switchgrass And Miscanthus RhizosphereDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0070712_10009296713300006175Corn, Switchgrass And Miscanthus RhizosphereVISAAEGRRLLAGDEQTESRADDIQRIVVLAVPVIRALSRGARVAKFAKVPWVFVASTAVAVGVAVRTGTREIQVLSSLVAHRLEQSTGEPADPALVKKVAIDLYLHPKRKLLLKDDKLHLVRLTRKWLLGGMFGRKSDKRANRALTAAERLDPATLAESWEAVRRRQ*
Ga0075367_1044086913300006178Populus EndosphereNSEHDDPLDVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRRLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDAATLAESWETVRRRRAAEPAPKPSHGR*
Ga0079222_1163181713300006755Agricultural SoilRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIHVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0075433_1116470313300006852Populus RhizosphereALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWESVRRRRAAEPAPKPSHGRGA*
Ga0075425_100003574183300006854Populus RhizosphereVLLGDKRVASAAEGSRLLSGEEHSEALADDIQRIVLLAVPVVRVLARGARVVKLPWVVIASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKKVAIDLYLHPKRQVRLTDDKLHLVRLTRKWVLGGIFGRKTEKRANRALAAAERVDLGALAASWNSERRSR*
Ga0075425_10072022723300006854Populus RhizosphereESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKPRLSDHKLHLVRLTRKWVLGGIFGRKTKKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0075425_10194950613300006854Populus RhizosphereESRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQSTGAPADPALVKKVAIELYLHPKRKLLLRDDKLHLVRLTRKWVLGGMIGRKTEKRANRALAAAERLDPATLAESWETVRRGRAVERPPSPTPGR*
Ga0075434_10133584523300006871Populus RhizosphereVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRRLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDAATLAESWETVRRRRAAEPAPKPSHGR*
Ga0075424_10133335423300006904Populus RhizosphereTESRADDIQRIIVLAVPVIRALARGARVVKVPWVIVGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPADPALVKKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMIGRNTEKRVNRALTAAERFDPATLAESWETVRRRRAVEPPPKPMHGR*
Ga0075424_10226298713300006904Populus RhizosphereVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWESVRRRRAAEPAPKPSHGRGA*
Ga0075418_1048789123300009100Populus RhizosphereSTAISVGVAVRTGVREIQVLSSLLAHRLEQATGAPADPALVKKAALDLYLHPKRKLRPTDDKLHLVRLTRKWVLGGIFGRKTAKRANLALAAAERLDAAALAASWDSVGRRADELPSRKSGGRPT*
Ga0105243_1306454413300009148Miscanthus RhizosphereVIVGSTAVSVGVAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTGKRTNRALAAAERLDSATLAENWKTVRRRRAVDRPPRPTSGR*
Ga0126380_1007207773300010043Tropical Forest SoilTAISVGVAVRTGAREIQVLSALVAHRLEQATGAPADPALVKKLALDLYLHPKRKPRLTDDKLHLVRLTRKWVLGGMFGRTTAKRADRALAAAERLDPAALVESWDSVPRRKRSAV*
Ga0134084_1019544923300010322Grasslands SoilRLLAGDEQTESLAEDIQRVVVLAVPVLRALARGARFVKLPWVIVGSTAISVGVAVRTGVREIQVLSSLVAHRLEQGTGGPADPALVKKVALDLYLHPKRKLRPTDDKLHLVRLTRKWVLGGIAGRKTAKRANQALAAAERLDSAALTASWDSVRRRADERPPRPSGAR*
Ga0126370_1079800713300010358Tropical Forest SoilISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPELVKKVALDLYLHPKRKLHPTDDKLHLVRLTRKWVLGGIFGRTTAKRADRALDAADRFDPAALAESWDAVRPPDRG*
Ga0105239_1150926013300010375Corn RhizosphereIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAENWKTVRRRRAVDRPPRPTSGR*
Ga0134124_1098150313300010397Terrestrial SoilSRADDIQRIIVLAVPVVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0134124_1225142413300010397Terrestrial SoilRVTSAADGRRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATVAESWDTGRRRAADEHERRSR*
Ga0134122_1021670613300010400Terrestrial SoilKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTGKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0134122_1078065823300010400Terrestrial SoilVLAVPVVRALARGGRIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0134121_1016318343300010401Terrestrial SoilSTAIAVGMAVRTGVREIQVLSSLVASRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS*
Ga0134123_1042859313300010403Terrestrial SoilVRALARGARVVKLPWVLIGSTAVAVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAENWKTVSRRRAVDRPPRPTPGR*
Ga0134123_1244407123300010403Terrestrial SoilASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKKVAIDLYLHPKRQVRLSDDKLHLVRLTRKWVLGGIFGRKTEKRANRALAAAERVDLGALAASWNSERRSR*
Ga0138514_10006288723300011003SoilALADDIQRIVLLAVPVVRVLARGARVVKLPWVVIASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKTVAIDLYLHPKRQVRLSDDKLHLVRLTRKWVLGGIFGRKTEKRANRALAAAERVDLGALAASWNSERRSR*
Ga0157321_104347213300012487Arabidopsis RhizospherePWVIIGSTAVSVGIAVRTGVREIQVLSSLVAHRLEQATGEPADPALVKKVALDLYLHPKRTLRATDDKLHLVRLTRKWVLSGIFGRKTAKRADRALAAAERLDSAALAASWESARRRADGPAFRDDPQSD*
Ga0157303_1003835313300012896SoilRLLAADEQTESRADDIQRIVVLAVPVIRLVARGARVAKVPWVFVASTAVAVGVAVRTGVREIQVLSSLLARRLEQETGAPADPALVKKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA*
Ga0157292_1027530013300012900SoilAVPVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGGGA*
Ga0157306_1000345663300012912SoilSAAEGRRLLAADERTESRADDIQRIIVLAVPVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGGGA*
Ga0157302_1037852723300012915SoilAADEQTESRADDIQRIVVLAVPVIRLMARGARVAKVPWVFVASTAVAVGVAVRTGVREVQVLSSLVAYRLEQATGEQADPALVKKVAVDVYLHPKRKLLLRDDKLHVVRLTRKWLLGGMIGRNTEKRANRALAAAERLDAATLAESWETVHRRR*
Ga0157310_1005433313300012916SoilDERTESRADDIQRIIVLAVPVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRNTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA*
Ga0126375_1021204433300012948Tropical Forest SoilVVRALARGARFVKLPWVIAGSTAISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPLLVKKVALDLYLHPKRKLDPTDDKLHLVRLTRKWVLGGIFGRRTAKRATRALAAAERFDSAALAASWNRARRPAGSS*
Ga0164300_1092895813300012951SoilAAEGRRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGMLGRKTEKRADRALAAAERLDAAMLAASWDTVRHRRAVEPPPTISARGAENKP*
Ga0164298_1031587523300012955SoilVNRAVDEMLLGNTRVSSADEGRRLLARNEQTESRADDIQRIIVLAVPVIRALARGARVVKVPWVIVGSTAVAVGVAVRMGAREIQVLASLLAHRLEQATGAPADPALVKKVAIDLYLHPKRKLVLSDDKLHLVQLTRKWVLGGMLGRNTEKRANRALAAA
Ga0164309_1011503833300012984SoilQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDTGRRRRAADEHERRSRQS*
Ga0157378_1155481613300013297Miscanthus RhizosphereGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR*
Ga0157372_1028028233300013307Corn RhizosphereADDIQRVVVLAVPVVRAFARGARLVKLPWLIVASSAISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPALVKKVTLDLYLHPKRKLNPTDHKLHLVRLTRKWVLGGIFGRETTKRAHRALAAAERLDPAAIAASWDRARRR*
Ga0173483_1075263113300015077SoilARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA*
Ga0173478_1039255723300015201SoilLPWVIVGSTALSVGVAVRTGVGEIQVLSSLVAHRLEQATGAHADPALVKKVTLDLYLHPKRTLRPADDKLHLVRLTRKWVLSGIFGRKTAKRANRALDAAERLDPAALVESWDSARRRSGMRR*
Ga0132258_1025586573300015371Arabidopsis RhizosphereAVAVGVAVRTGTREIQVLSSLVAHRLEQSTGEPADPALVKKVAIDLYLHPKRKLLLKDDKLHLVRLTRKWLLGGMFGRKSDKRANRALTAAECLDPATLAESWEAVRRRQ*
Ga0193724_103405613300020062SoilVKLPWVIVGSTAVGVGVAVRMGVREIQVLSSLVAQRLEQATGAPADPALVKKVAIDLYLHPKRKLVLSDDKLHLVQLTRKWVLGGMLGRNTEKRANRALAAAERLDTATLAASWDTVRHRRPVEPPASPTHDR
Ga0247793_100122563300023066SoilTESRADDIQRIIVLAVPVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA
Ga0247752_100132513300023071SoilAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGMVGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGGGA
Ga0247686_104478513300024177SoilVTSAAEGRRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATVAESWDTGRRRAADEHERRSRQS
Ga0247669_105945813300024182SoilSAAEGRRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATVAESWDTGRRRAADEHERRSRQS
Ga0247687_100850223300024286SoilADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATVAESWDTGRRRAADEHERRSRQS
Ga0207688_1070444923300025901Corn, Switchgrass And Miscanthus RhizosphereRVVKVPWVIVGSTAVSVGVAVRTGVREIQVLSSLVAHRLEQATGAPADPALVEKVAIDLYLHPKRKLNPNDHKLHLVRLTRKWVLGGIFGRETTKRAHRALAAAERLDPAAIAASWDKARRR
Ga0207699_1022663313300025906Corn, Switchgrass And Miscanthus RhizosphereVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAENWDTGRRRRAADEHERRSRES
Ga0207660_1153997213300025917Corn RhizosphereAVPVVRALARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTSGR
Ga0207652_1068314123300025921Corn RhizosphereIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAHRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS
Ga0207664_1083354923300025929Agricultural SoilSDRRVISAAEGRRLLAGDEQTESRADDIQRIVVLAVPVIRALSRGARVAKFAKVPWVFVASTAVAVGVAVRTGTREIQVLSSLVAHRLEQSTGEPADPALVKKVAIDLYLHPKRKLLLKDDKLHLVRLTRKWLLGGMFGRKSDKRANRALTAAERLDPATLAESWEAVRRRQ
Ga0207670_1178905013300025936Switchgrass RhizosphereVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPT
Ga0207678_1016639133300026067Corn RhizosphereSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRASRALAAAERLDPATLAENWDTGRRRRAADEHERRSRES
Ga0207636_100527613300027479SoilADERTESRADDIQRIIVLAVPVVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGGGA
Ga0209966_103017823300027695Arabidopsis Thaliana RhizosphereVRALARGARVVKLPWVIIGSTAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLLLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWETVRRRREAEPPPKPSHGRGA
Ga0209073_1023355213300027765Agricultural SoilVDDVLLGDKRVASAAEGSLLLSGEEHSEALADDIQRIVLLAVPVVRVLARGARVVKLPWVVIASTAVAVGIAVRTGVNEIQVLSSLLAYRLEQATGEPADPALVKKVAIDLYLQPKRQVRLTDDKLHLVRLTRKWVLGGIFGRKTEKRANRALAAAERVDLGALAASWNSERRSR
Ga0247684_100689633300028138SoilRVTSAAEGRCLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRASRALAAAERLDPATLAENWDTGRRRRAADEHERRSRES
Ga0307317_1021622413300028720SoilARLVKLPWVIVASSAISVGVAVRTGIREIQVLSSLVAHRLEQATGEPADPALVKKVTLDLYLHPKRKLRPTDHKLHLVRLTRKWVLGGIFGRETAKRADRALAAAERLDPAALAASWDSARRR
Ga0307316_1031365113300028755SoilPVVRAFARGARLVKLPWVIVASSAISVGVAVRTGIREIQVLSSLVAHRLEQATGEPADPALVKKVTLDLYLHPKRKLRPTDHKLHLVRLTRKWVLGGIFGRETAKRADRALAAAERLDPAALAASWDSARRR
Ga0307302_1057469023300028814SoilCVILASTTLSIGVAVRTGVHEIQVLSALVAHRLEQETGTPPDPVLVEKLAIELYLHPKRGPDLRDGKLRLVRLTRKWLLSGAFGHTTQRRAGRALAAAERLEPAALAARWDQIRRPHALAPNSLRDA
Ga0307310_1068745923300028824SoilDIQRVVVLAVPVVRAFARGARLVKLPWLIVASSAISVGVAVRTGVREIQVLSSLVAHRLEQATGEPADPTLVKKVTLDLYLHPKRKLNPTDHKLHLVRLTRKWVLGGIFGRETAKRANRALAAAERLDAAALAASWDRARRR
Ga0307501_1024691113300031152SoilIQRIIVLAVPVIRALARGARVVKVPWVIVGSTAVGVGVAVRTGVREIQVLSSLVAHQLEQATGAPADPALVEKVAIDLYLHPKRKLVLSDDKLHLVQLTRKWVLGGMLGRNTEKRANRALAAAERLDAAALAASWDTTRRRRAVEPTPRPTHDR
Ga0310887_1095122713300031547SoilIGSTAVTVGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRRTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR
Ga0307468_10243687713300031740Hardwood Forest SoilARGARVVKLPWVLIGSTAVTVGLAVRTGVREIQVLSSLVAYRLEQATGTPADPALVKKVAIDLYLHPKRKLRLSDHKLHLVRLTRKWVLGGIFGRNTKKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR
Ga0310904_1118295213300031854SoilIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDTGRRRRAADEHERRSRQS
Ga0310900_1023949733300031908SoilGLAVRTGVREIQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRRTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR
Ga0310890_1050707613300032075SoilAVAVGIAVRTGVREIQVLSSLVAHRLEQATGAPPDPALVEKVAIDLYLHPKRKLRLSDDKLHLVRLTRKWVLGGVLGRKTEKRASRALAAAERLDPATLAESWESVRRRRAAEPAPKPSHGRGA
Ga0310895_1061401613300032122SoilSDRRVISAAEGRRLLAGDEQTESRADDIQRIVVLAVPVIRALSRGARVAKFAKVPWVFVASTAVAVGVAVRTGTREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDIGRRRAADEHERRSRQS
Ga0307472_10096336613300032205Hardwood Forest SoilRVTSAAEGRRLLAADEQTESRADDIQRIIVLAVPVVRALARGARIVKLPWVLVGSTAVAVGMAVRTGVREIQVLSSLVAYRLEQATGAPADPELVKKVAIDLYLHPKRKLQVSDDKLHVVRLTRKWVLGGVIGRKTEKRANRALAAAERLDPATLAESWDTGRRRAADEHERRSRQS
Ga0314864_0044969_515_9943300033805PeatlandGRRLLTADERSESFADDIQRVVVLAVPVVRALSRGARVAKLPWVIVASTAISVGIAVRTGVREIQVLSSLVAYRLEQATGAPADPALVKRVAIDLYLHPKRKIRVADNKLHLVRLTRKWVIGGIFGRTTEKRANQALAAADRLDPAAFRGEPDYRAASS
Ga0373950_0154615_138_5243300034818Rhizosphere SoilVLIGSTAVTVGLAVRTGVREVQVLSSLVAHRLEQATGTPADPALVKKVAIELYLHPKRKLRLSDDKLHLVRLTRKWVLGGIFGRKTEKRTNRALAAAERLDSATLAESWKTVRRRRAVDRPPRPTPGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.