NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F099873

Metagenome Family F099873

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099873
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 48 residues
Representative Sequence MEDVDLARELIILKAKDLGMDDESLDALDEVVCKMLGIEDADPLIFPT
Number of Associated Samples 88
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.16 %
% of genes near scaffold ends (potentially truncated) 16.50 %
% of genes from short scaffolds (< 2000 bps) 71.84 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.728 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(23.301 % of family members)
Environment Ontology (ENVO) Unclassified
(67.961 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.320 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.47%    β-sheet: 0.00%    Coil/Unstructured: 60.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF01464SLT 1.94
PF05127Helicase_RecD 1.94
PF13481AAA_25 0.97
PF08803ydhR 0.97
PF13884Peptidase_S74 0.97
PF03237Terminase_6N 0.97
PF02796HTH_7 0.97
PF00685Sulfotransfer_1 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG1444tRNA(Met) C34 N-acetyltransferase TmcATranslation, ribosomal structure and biogenesis [J] 1.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.73 %
All OrganismsrootAll Organisms24.27 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10047943All Organisms → cellular organisms → Bacteria2161Open in IMG/M
3300000116|DelMOSpr2010_c10013154All Organisms → cellular organisms → Bacteria4218Open in IMG/M
3300000116|DelMOSpr2010_c10042089Not Available2054Open in IMG/M
3300000949|BBAY94_10012909Not Available2310Open in IMG/M
3300000949|BBAY94_12610950Not Available606Open in IMG/M
3300001450|JGI24006J15134_10061063Not Available1489Open in IMG/M
3300001460|JGI24003J15210_10038326Not Available1687Open in IMG/M
3300001472|JGI24004J15324_10022918Not Available2097Open in IMG/M
3300002930|Water_100217Not Available13506Open in IMG/M
3300003264|JGI26119J46589_1046879Not Available516Open in IMG/M
3300004448|Ga0065861_1100397Not Available1334Open in IMG/M
3300004457|Ga0066224_1050647Not Available1816Open in IMG/M
3300004460|Ga0066222_1270947Not Available503Open in IMG/M
3300004941|Ga0068514_1014258Not Available857Open in IMG/M
3300005512|Ga0074648_1025832Not Available3108Open in IMG/M
3300005662|Ga0078894_11404056Not Available583Open in IMG/M
3300005837|Ga0078893_12253340Not Available1891Open in IMG/M
3300006026|Ga0075478_10248380Not Available534Open in IMG/M
3300006164|Ga0075441_10096645Not Available1135Open in IMG/M
3300006166|Ga0066836_10515018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria724Open in IMG/M
3300006190|Ga0075446_10196074Not Available565Open in IMG/M
3300006193|Ga0075445_10047286Not Available1721Open in IMG/M
3300006352|Ga0075448_10050133Not Available1334Open in IMG/M
3300006789|Ga0098054_1000802All Organisms → cellular organisms → Bacteria17476Open in IMG/M
3300006802|Ga0070749_10142358Not Available1398Open in IMG/M
3300006802|Ga0070749_10282948All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300006810|Ga0070754_10212622Not Available896Open in IMG/M
3300007229|Ga0075468_10234941Not Available524Open in IMG/M
3300007345|Ga0070752_1058284All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1746Open in IMG/M
3300007539|Ga0099849_1037457All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2056Open in IMG/M
3300007973|Ga0105746_1168918Not Available741Open in IMG/M
3300008221|Ga0114916_1104728Not Available680Open in IMG/M
3300009124|Ga0118687_10025579All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300009172|Ga0114995_10060901Not Available2141Open in IMG/M
3300009172|Ga0114995_10170205Not Available1214Open in IMG/M
3300009420|Ga0114994_10417841All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. KK3887Open in IMG/M
3300009420|Ga0114994_10829793Not Available600Open in IMG/M
3300009422|Ga0114998_10490626Not Available575Open in IMG/M
3300009428|Ga0114915_1036907Not Available1640Open in IMG/M
3300009428|Ga0114915_1045732Not Available1430Open in IMG/M
3300009428|Ga0114915_1085204Not Available959Open in IMG/M
3300009434|Ga0115562_1168732Not Available803Open in IMG/M
3300009505|Ga0115564_10014754All Organisms → cellular organisms → Bacteria → Proteobacteria5479Open in IMG/M
3300009505|Ga0115564_10527534Not Available566Open in IMG/M
3300010430|Ga0118733_105171936Not Available689Open in IMG/M
3300017697|Ga0180120_10174525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB2901Open in IMG/M
3300017708|Ga0181369_1094456All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.625Open in IMG/M
3300017719|Ga0181390_1002800Not Available7066Open in IMG/M
3300017754|Ga0181344_1017464Not Available2243Open in IMG/M
3300018410|Ga0181561_10432652Not Available595Open in IMG/M
3300018413|Ga0181560_10147909Not Available1189Open in IMG/M
3300018420|Ga0181563_10414063Not Available767Open in IMG/M
3300018421|Ga0181592_10402015Not Available967Open in IMG/M
3300020185|Ga0206131_10136884Not Available1312Open in IMG/M
3300020347|Ga0211504_1060869Not Available884Open in IMG/M
3300020352|Ga0211505_1142318Not Available565Open in IMG/M
3300021085|Ga0206677_10093227All Organisms → Viruses → Predicted Viral1438Open in IMG/M
3300021371|Ga0213863_10063936Not Available1856Open in IMG/M
3300021373|Ga0213865_10174683Not Available1082Open in IMG/M
3300021375|Ga0213869_10008669All Organisms → cellular organisms → Bacteria → Proteobacteria6212Open in IMG/M
3300021389|Ga0213868_10028570All Organisms → cellular organisms → Bacteria4186Open in IMG/M
3300021425|Ga0213866_10030614All Organisms → Viruses → Predicted Viral3139Open in IMG/M
3300021957|Ga0222717_10022152All Organisms → cellular organisms → Bacteria4256Open in IMG/M
3300021957|Ga0222717_10236980Not Available1066Open in IMG/M
3300021958|Ga0222718_10010420Not Available6953Open in IMG/M
3300021959|Ga0222716_10180194Not Available1354Open in IMG/M
3300022074|Ga0224906_1001881Not Available9892Open in IMG/M
3300022169|Ga0196903_1002664All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2434Open in IMG/M
3300022187|Ga0196899_1019604Not Available2502Open in IMG/M
3300022308|Ga0224504_10261551Not Available715Open in IMG/M
3300024294|Ga0228664_1065049Not Available849Open in IMG/M
3300025048|Ga0207905_1007015Not Available2061Open in IMG/M
3300025079|Ga0207890_1004430Not Available3313Open in IMG/M
3300025083|Ga0208791_1022627Not Available1259Open in IMG/M
3300025084|Ga0208298_1008007Not Available2755Open in IMG/M
3300025085|Ga0208792_1051758Not Available770Open in IMG/M
3300025098|Ga0208434_1086692Not Available630Open in IMG/M
3300025138|Ga0209634_1027912Not Available3034Open in IMG/M
3300025138|Ga0209634_1053728Not Available1974Open in IMG/M
3300025266|Ga0208032_1029583Not Available1465Open in IMG/M
3300025276|Ga0208814_1009962All Organisms → cellular organisms → Bacteria3435Open in IMG/M
3300025276|Ga0208814_1052656Not Available1181Open in IMG/M
3300025276|Ga0208814_1067537Not Available987Open in IMG/M
3300025610|Ga0208149_1125667Not Available600Open in IMG/M
3300025617|Ga0209138_1167711Not Available541Open in IMG/M
3300025652|Ga0208134_1044144All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1460Open in IMG/M
3300025809|Ga0209199_1253986Not Available573Open in IMG/M
3300025876|Ga0209223_10078633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1880Open in IMG/M
3300025876|Ga0209223_10221276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.909Open in IMG/M
3300025886|Ga0209632_10228607All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.965Open in IMG/M
3300027522|Ga0209384_1024938Not Available1838Open in IMG/M
3300027752|Ga0209192_10078957Not Available1402Open in IMG/M
3300027791|Ga0209830_10322252Not Available679Open in IMG/M
3300027813|Ga0209090_10528754Not Available545Open in IMG/M
3300027849|Ga0209712_10171123Not Available1240Open in IMG/M
3300028022|Ga0256382_1182441Not Available501Open in IMG/M
3300029787|Ga0183757_1019408Not Available1657Open in IMG/M
3300031519|Ga0307488_10479326All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.748Open in IMG/M
3300031519|Ga0307488_10826400Not Available510Open in IMG/M
3300031622|Ga0302126_10246068Not Available620Open in IMG/M
3300034061|Ga0334987_0037699All Organisms → cellular organisms → Bacteria → Proteobacteria4146Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.30%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.68%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.77%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.77%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.85%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.88%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.91%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.91%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.91%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake1.94%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.94%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.94%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.94%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water1.94%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.94%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.97%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.97%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.97%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.97%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.97%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.97%
Estuary WaterEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water0.97%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.97%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.97%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300002930Estuary water microbial communities from Pearl Estuary, Zhujiang, ChinaEnvironmentalOpen in IMG/M
3300003264Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004941Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2umEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022308Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24EnvironmentalOpen in IMG/M
3300024294Seawater microbial communities from Monterey Bay, California, United States - 78DEnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1004794323300000101MarineMIDVELAREMIYLKAKDLGLDEEQLESLDTLVCSQLKILNPDPFIYPT*
DelMOSpr2010_1001315443300000116MarineMIDVDLARELIILKAKDLGLDDEKLDSLDVLVCSRLGIEDPDPLIFPS*
DelMOSpr2010_1004208923300000116MarineMETARELIILKAKDLGLDDEKLDQLDDTVCGLLGLEDADPLIFPT*
BBAY94_1001290923300000949Macroalgal SurfaceMIDADLARELIILKAKDLGMDENKLDALDELVCKMLEIDDADPLIFPS*
BBAY94_1261095023300000949Macroalgal SurfaceMLDADLARELIILKAKDLGLDDSELDQLDEVVCMALDIEDPDPLIFPV*
JGI24006J15134_1006106313300001450MarineMVDADLARELIVLKAKDLGMNDEKLGELDKVICKMLGIEDADPFIFPS*
JGI24003J15210_1003832633300001460MarineMVDADLARELIVLKAKDLGMNDEKLDELDKVICKMLGIEDADPFIFPS*
JGI24004J15324_1002291823300001472MarineMVDMETARELIILKAKDLGLDDEKLDQLDDTVCELLGLENADPLIFPT*
Water_100217133300002930Estuary WaterMIDVDLARELIVLKAKDLGLEGENLDQMDELVCELLGIEDADPLIFPS*
JGI26119J46589_104687913300003264MarineLIILKAKDLGLEDEDLNDLDEVICKMLRIKDAEPFIFPS*
Ga0065861_110039713300004448MarineMDDVNLSRELIILKAKDLGMDDESLDALDEVVCKMLGIKDADPFIFPT*
Ga0066224_105064733300004457MarineMDDVNLSREFIILKAKDLGMNDESLDALDEVVCKMLGIKDADPFIFPT*
Ga0066222_127094713300004460MarineMTDIDLARELIILKAKDLGLGDDALEQLDAVVCKMLNIEDAEPLIFPT*
Ga0068514_101425823300004941Marine WaterWEDSMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGIEAADPLIFPS*
Ga0068514_102558113300004941Marine WaterMLEAELAREIIALKAKDLGMDDADLEQLDEVICKVLGIDDPD
Ga0074648_102583223300005512Saline Water And SedimentMLDADLARELIILKAKDLGLDDSELDQLDEAVCMVLGIEDPDPLIFPV*
Ga0078894_1140405613300005662Freshwater LakeMGENDIDVNLARELIVLKAKDLGLDDAALERLDEVVCAVLDIEDADPLIFPT*
Ga0078893_1225334013300005837Marine Surface WaterLTFTPTWEDSMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGVEDADPLIFPS*
Ga0075478_1024838023300006026AqueousMIDVDLARELIVLKAKDLGLEDENLDQMDELVCELLGIEDADPLIFPS*
Ga0075441_1009664523300006164MarineMDDVDLSRELIILKAKDLGMDDKSLDALDEVVCKMLGIEDADPFIFPT*
Ga0066836_1051501823300006166MarineMIDVDFARELIILKAKDLKMDDESLDALDKVFCKILFY*
Ga0075446_1019607413300006190MarineMEDVDLSRELIILKAKDLGMDDESLDALDGVVCKMLGIEDADPFIFPT*
Ga0075445_1004728633300006193MarineMENDNMIDVDLARELIILKAKDLGMDDGGLDALDEVVCKMLGIEDADPFIFPT*
Ga0075448_1005013323300006352MarineKMEDVDLSRELIILKAKDLGMDDESLDALDGVVCKMLGIEDADPFIFPT*
Ga0098054_100080263300006789MarineMDDVDLARELIILKAKDLGMDDESLNELDEVVCNILGIKDADPFIWPA*
Ga0070749_1014235823300006802AqueousMEDVELAREIILLKAKDLGLDDDALDQLDVVICKMLDIEFPDPIIFPV*
Ga0070749_1028294833300006802AqueousMIDVDLARELIVLKAKDLGLDEEQLESLDAFVCKMLEIEDADP
Ga0070754_1021262223300006810AqueousMIDVDLARELIVLKAKDLGLDEEQLESLDAVVCKMLEIEDADPLIFPS*
Ga0075468_1023494113300007229AqueousMLDADLARELIILKAKDLGLDDSELDQLDEAVCMVLGIEDPDPLIFP
Ga0070752_105828423300007345AqueousMIDVDLARELIVLKAKDLGLDEEQLDSLDAVVCKMLEIEDADPLIFPS*
Ga0099849_103745723300007539AqueousMIDVDLARELIILKAKDLGLGEKALQELDSTVCKMLNIEDPEPFIFPD*
Ga0105746_116891823300007973Estuary WaterMIDVDLARELIVLKSKDLGLEDEKLDQMDELVCELLGIEDADPLIFPS*
Ga0114916_110472813300008221Deep OceanMFMEDVNLSRELIILKAKDLGMDDESLDALDGVVCKMLGIENADPLIFPT*
Ga0118687_1002557933300009124SedimentMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGVEDADPLIFPS*
Ga0114995_1006090123300009172MarineMIDADLARELIILKAKDLEMDDENLDALDQVVCKMLEIVDADPLIFPS*
Ga0114995_1017020523300009172MarineMDDVNLSREFIILKAKDLGMDDESLDALDEVVCKMLGIKDADPLIFPT*
Ga0114994_1041784123300009420MarineMFMEDVDLARELIILKAKDLGMDDESLDALDEVVCKMLGIEDADPLIFPT*
Ga0114994_1082979323300009420MarineMDDVDLARELIILKAKDLKMDDESLESLDEVVCKMLGIEDADPFIFPT*
Ga0114998_1049062623300009422MarineMIDVDLARELIILKAKDLKMDDKSLEALDEVVCKMLKIENADPLIFPS*
Ga0114915_103690723300009428Deep OceanMDDVDLARELIILKAKDLKMDDKSLEALDEVVCKMLKIENADPLIFPS*
Ga0114915_104573223300009428Deep OceanMGRSKLIDMETARELIILKAKDLGLDDEKLDQLDDTVCGLLGLEDADPLIFPT*
Ga0114915_108520423300009428Deep OceanMEDVNLSRELIILKAKDLGMDDEGLDALDEVVCKMLGIEDADPFIFPT*
Ga0115562_116873213300009434Pelagic MarineMIDVDLAREMIYLKAKDLGLDEEQLESLDTLVCSQLKIEDPDPFIYPT*
Ga0115564_1001475423300009505Pelagic MarineMIDVDLAREMIYLKAKDLGLDDEKLESLDILVCSQLKIKDPDPFIYPT*
Ga0115564_1052753423300009505Pelagic MarineKMEKMIDVELARELIYLKAKDLGLDEEQLESLDRVVCSRLKIEDPDPFIYPT*
Ga0118733_10517193623300010430Marine SedimentMLDADLAREIIVLKAKDLGLDDSELEQLDEVVCMMLDIEDPEPLIFPV*
Ga0180120_1017452533300017697Freshwater To Marine Saline GradientMDKMIDVELAREMIYLKAKDLGLDEEQLESLDTLVCSQLKIEDPDPFIYPT
Ga0181369_109445623300017708MarineMIDVDLTRELIILKAKDLGMEDDSLDALDELVCKMLEIDDADPLIFPS
Ga0181390_100280073300017719SeawaterMIDVDLARELIVLKAKDLGLKDEKLDQMDELVCELLNIEDADPLIFPS
Ga0181344_101746433300017754Freshwater LakeMGENDIDVNLARELIVLKAKDLGLDDAALERLDEVVCAVLDIEDADPLIFPT
Ga0181561_1043265213300018410Salt MarshTFTPTWEDSMIDVDLAREPIVLKAKDLGLEDEKLDQMDELVCELLGIEVADPLIFPS
Ga0181560_1014790923300018413Salt MarshMEDADLAREIILLKAKDLGLDDDALDQLDVVICKMLDIEFPDPIIFPV
Ga0181563_1041406323300018420Salt MarshMEDADLAREIILLKAKDLGLDDDALDQLDVVICKMLDIEFPDPIIFPA
Ga0181592_1040201523300018421Salt MarshVDLARELIILKAKDLGLSDDDLQSLDDVVCKMLNIENPEPFIFPT
Ga0206131_1013688423300020185SeawaterRGRSKLIDMETARELIILKAKDLGLDDEKLDQLDDTVCGLLGLEDADPLIFPT
Ga0211504_106086943300020347MarineMDDVDLARELIILKAKDLGMDDESLNELDEVVCNILGIKDADP
Ga0211505_114231813300020352MarineMDDVDLARELIILKAKDLGMDDESLNELDEVVCNILGIKDADPFIWPS
Ga0206677_1009322723300021085SeawaterMTDADLSRELIALKAKDLGLDDSEIDELDQLVCELLGIEDPDPIIFPS
Ga0213863_1006393623300021371SeawaterMIDVDLARELIVLKAKDLGLEDENLDQMDELVCELLGIEDADPLIFPS
Ga0213865_1017468323300021373SeawaterMIDVDLARELIILKAKDLGLGEKALQELDSTVCKMLNIEDPEPFIFPD
Ga0213869_1000866963300021375SeawaterMIDVDLARELIVLKAKDLGLDEEQLESLDAVVCKMLEIEDVDPLIFPS
Ga0213868_1002857043300021389SeawaterMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGIEDADPLIFPS
Ga0213866_1003061423300021425SeawaterMIDVDLARELIILKAKDLGLSDDDLQSLDDVVCKMLNIENPDPLIFPT
Ga0222717_1002215223300021957Estuarine WaterMIDVDLTRELIILKAKDLGMEDDNLDALDELVCKMLEIDDADPLIFPS
Ga0222717_1023698023300021957Estuarine WaterMIDADLARELIILKAKDLGMDENKLDALDELVCKMLEIDDADPLIFPS
Ga0222718_1001042043300021958Estuarine WaterMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGVEDADPLIFPS
Ga0222716_1018019423300021959Estuarine WaterVLTFTPTWEDSMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGVEDADPLIFPS
Ga0222719_1009149623300021964Estuarine WaterMEDAELAREIILLKAKDLGLDDDALDQLDVVICKMLDIEFPDPIIFPV
Ga0224906_1001881103300022074SeawaterMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGIENADPLIFPS
Ga0196903_100266433300022169AqueousMIDVDLARELIVLKAKDLGLDEEQLESLDAVVCKMLEIEDADPLIFPS
Ga0196899_101960423300022187AqueousMIDVDLARELIILKAKDLKMDDKSLEALDEVVCKMLKIENADPLIFPS
Ga0224504_1026155113300022308SedimentMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGI
Ga0228664_106504923300024294SeawaterMIDVDLTRELIILKAKDLGMEDDSLDALDELVCKMLEIDNADPLIFPS
Ga0207905_100701533300025048MarineMVDADLARELIVLKAKDLGMNDEKLGELDKVICKMLGIEDADPFIFPS
Ga0207890_100443023300025079MarineMVDADLARELIVLKAKDLGMNDEKLDELDKVICKMLGIEDADPFIFPS
Ga0208791_102262723300025083MarineMIDVDLARELIILKAKDLGLDDEKLDSLDVLVCSRLGIEDPDPLIFPS
Ga0208298_100800733300025084MarineMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLNIEDADPLIFPS
Ga0208792_105175813300025085MarineIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLNIEDADPLIFPS
Ga0208434_108669213300025098MarineMDDVDLARELIILKAKDLGMDDESLNELDEVVCNILGIKDADPFIWPA
Ga0209634_102791243300025138MarineMGRSKLIDMETARELIILKAKDLGLDDEKLDQLDDTVCGLLGLEDADPLIFPT
Ga0209634_105372823300025138MarineMVDMETARELIILKAKDLGLDDEKLDQLDDTVCELLGLENADPLIFPT
Ga0208032_102958323300025266Deep OceanMEDVDLSRELIILKAKDLGMDDESLDALDGVVCKMLGIEDADPFIFPT
Ga0208814_100996263300025276Deep OceanMEDVNLSRELIILKAKDLGMDDESLDALDGVVCKMLGIEDADPLIFPT
Ga0208814_105265653300025276Deep OceanMDDVDLARELIILKAKDLKMDDKSLEALDEVVCKMLKIENADPLIFPS
Ga0208814_106753723300025276Deep OceanMEDVNLSRELIILKAKDLGMDDEGLDALDEVVCKMLGIEDADPFIFPT
Ga0208149_112566713300025610AqueousMIDVDLARELIVLKAKDLGLDEEQLESLDAVVCKMLEIEDADPL
Ga0209138_116771113300025617MarineVIMIDVDLARELIVLKAKDLGLDEEQLESLDAVVCKMLEIEDADPLIFPS
Ga0208134_104414423300025652AqueousMIDVDLARELIVLKAKDLGLEDEKLDQMDELVCELLGIEDADPFIFPS
Ga0209199_125398623300025809Pelagic MarineMIDVDLAREMIYLKAKDLGLDDEKLESLDILVCSQLKIKDPDPFIYPT
Ga0209223_1007863343300025876Pelagic MarineMGPKEIEMIDVELAREMIYLKAKDLGLDEEQLESLDRLVCSQLKIEDPDPFIYPT
Ga0209223_1022127623300025876Pelagic MarineMEKMIDVELARELIYLKAKDLGLDDEQLESLDTLVCSQLKIEDPDPFIYPI
Ga0209632_1022860733300025886Pelagic MarineMEKMIDVELARELIYLKAKDLGLDDEQLESLDTLVCSQLKIEDPDPFIYPT
Ga0209384_102493833300027522MarineMDDVDLSRELIILKAKDLGMDDKSLDALDEVVCKMLGIEDADPFIFPT
Ga0209192_1007895723300027752MarineLYLGDDNMIDADLARELIILKAKDLEMDDENLDALDQVVCKMLEIVDADPLIFPS
Ga0209830_1032225213300027791MarineMIDVDLARELIILKAKDLKMDDKSLEALDEVVCKMLKIENADPLIF
Ga0209090_1052875423300027813MarineMEDVDLARELIILKAKDLGMDDESLDALDEVVCKMLGIEDADPLIFPT
Ga0209712_1017112323300027849MarineMIDADLARELIILKAKDLEMDDENLDALDQVVCKMLEIVDADPLIFPS
Ga0256382_118244123300028022SeawaterMVDADLARELIVLKAKDLGMNDKKLDELDKVICKMLGIENADPFIFPS
Ga0183757_101940833300029787MarineMVDADLARELIVLKAKDLGMNDKKLDELDKVICKMLGIEDADPFIFPS
Ga0307488_1047932623300031519Sackhole BrineMIDVDLARELIILKAKALGLDDEKLDSLDVLVCSRLGIEDPDPLIFPS
Ga0307488_1082640013300031519Sackhole BrineMDDVNLSRELIILKAKDLGMDDESLDALDEVVCKMLGIKDADPFIFPT
Ga0302126_1024606823300031622MarineMDDVNLSREFIILKAKDLGMDDESLDALDEVVCKMLGIKDADPLIFPT
Ga0334987_0037699_3025_31833300034061FreshwaterMEENDIDVNLARELIVLKAKDLGLDDIAIERLDAVICAALNIDDADPLIFPT


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