Basic Information | |
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Family ID | F099863 |
Family Type | Metagenome |
Number of Sequences | 103 |
Average Sequence Length | 53 residues |
Representative Sequence | MDEEELKAIKKRERIFDFFWSLEEQQTILGLLKGRKMKKELKEHLKDKEVKNV |
Number of Associated Samples | 68 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Archaea |
% of genes with valid RBS motifs | 70.30 % |
% of genes near scaffold ends (potentially truncated) | 19.42 % |
% of genes from short scaffolds (< 2000 bps) | 84.47 % |
Associated GOLD sequencing projects | 60 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.40 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Archaea (46.602 % of family members) |
NCBI Taxonomy ID | 2157 |
Taxonomy | All Organisms → cellular organisms → Archaea |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (39.806 % of family members) |
Environment Ontology (ENVO) | Unclassified (90.291 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.262 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 58.02% β-sheet: 0.00% Coil/Unstructured: 41.98% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.40 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Marine Seawater Marine Hydrothermal Vent Fluids Hydrothermal Vent Fluids |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPaug09P16500mDRAFT_10164283 | 3300000142 | Marine | LKKEEEELAAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEVKNGR* |
LPjun09P161000mDRAFT_10545331 | 3300000190 | Marine | LKKDEEELATIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKE |
LPfeb10P161000mDRAFT_10395143 | 3300000219 | Marine | LKKDEEELAAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV* |
LPaug09P202000mDRAFT_10475982 | 3300000323 | Marine | MSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKEHLKDKEVKNV* |
JGI24006J15134_101642271 | 3300001450 | Marine | MDEEERKKKERIFDFFWSPEEQRTILGLLKGRKMKKELKEHLKKNAVKNEK* |
JGI24006J15134_101929531 | 3300001450 | Marine | LVAIKKKERIFDFFWSAEEQQTILGLLKGRKMKKELKEHLKEK* |
JGI26061J44794_10113594 | 3300002919 | Marine | MDEEEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELXKHLKDKEVKNV* |
Ga0066854_102590403 | 3300005431 | Marine | LKKDEEELAAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLK |
Ga0066383_100293333 | 3300005953 | Marine | MDEKEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0066369_101336992 | 3300005969 | Marine | FWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0066369_102989491 | 3300005969 | Marine | MDEEEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKN |
Ga0066369_103130331 | 3300005969 | Marine | MDEEEISEEESKAIKKKKRIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKN |
Ga0066368_103313672 | 3300006002 | Marine | MSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0066374_101204153 | 3300006012 | Marine | LKKDEEELATIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV* |
Ga0066382_100710652 | 3300006013 | Marine | MDEEEMSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0066375_100385774 | 3300006019 | Marine | MDEEEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0075441_102535473 | 3300006164 | Marine | MDEEEISEEELKAAKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0075441_102570192 | 3300006164 | Marine | LKKDEEELKAIKKRERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0075443_100087734 | 3300006165 | Marine | LKIDKKRERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKEKEAKNV* |
Ga0068469_11448171 | 3300006306 | Marine | AIKKRERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKSGR* |
Ga0068470_12553024 | 3300006308 | Marine | MDKEEMSEEELKAIKKKERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKQKEAKNGR* |
Ga0068471_11661504 | 3300006310 | Marine | LKKDEEELAAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLNERRK* |
Ga0068471_13720381 | 3300006310 | Marine | MSEEARKKIHRIFDFFWTLEEQNTILGLLKGRKMKKELKEHLKEKEAKNV* |
Ga0068471_16071521 | 3300006310 | Marine | LKKDKEELKAIKKKERIFVFFWTLEEQHTILGLLRGRKLKKELKEHLKKKEVK* |
Ga0068472_102506204 | 3300006313 | Marine | MSEEELKAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEVKNGR* |
Ga0068472_107026363 | 3300006313 | Marine | LKKEEEELAAIKKRERIFDFFWTLEEQHTILGLLKGRKMKKELKEHLKEKEVKNV* |
Ga0068476_11370442 | 3300006324 | Marine | LKKDEEELVAIKKKKERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKQKEAKNGR* |
Ga0068501_12424232 | 3300006325 | Marine | LKIDKKRERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV* |
Ga0068488_11315213 | 3300006331 | Marine | MSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0068480_12070004 | 3300006335 | Marine | LKKDKEELKVIKKKERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKEKEVKNGR* |
Ga0068502_11378352 | 3300006336 | Marine | LKKDEEELAAIKKRERIFDFFWTLEEQHTILGLLKGRKLKKELKGHLKKKEVK* |
Ga0068502_12219212 | 3300006336 | Marine | MDEEELKAIKKKERIFDFFWTLEEQHTILGLLKGRKMKKELKEHLKNKEVK* |
Ga0068502_12675714 | 3300006336 | Marine | MDKRKERVFDFFWTLEEQRTILGLLKGKKMKKELKEHLK |
Ga0068502_14037172 | 3300006336 | Marine | LKIDKKKERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKDKEVK* |
Ga0068502_18962941 | 3300006336 | Marine | LKKDEEELVAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEVKNGR* |
Ga0068482_12315764 | 3300006338 | Marine | LKKDEEELAAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEVK* |
Ga0068482_14038402 | 3300006338 | Marine | MDEEEMSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGIKMKKKLKDKKVKNV* |
Ga0068481_10772166 | 3300006339 | Marine | LKKDEEELAAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEVKNGR* |
Ga0068481_14326504 | 3300006339 | Marine | LKKDEEELAAIKKRERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKQKEAKNGR* |
Ga0068481_15468004 | 3300006339 | Marine | MDEEELNAIKKKERIFDFFWTLEEQRTILGLLRGRKMKKELKEHLKKKEVK* |
Ga0068503_102130719 | 3300006340 | Marine | LKKDEEELATIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV* |
Ga0068503_103475252 | 3300006340 | Marine | MDKEEMSEEELKAIKKRERIFDFFWTLEEQHTILGLLKGRKLKKELKGHLRKKETKK* |
Ga0068503_104759352 | 3300006340 | Marine | LKKDEEELAAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR* |
Ga0068503_105084543 | 3300006340 | Marine | MDEEELKAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKKLKDKKVKNV* |
Ga0068503_106271413 | 3300006340 | Marine | MSEEEMSEEELKAIKKKERIFDFFWTLEEQHTILGLLKGRKMKKELKEHLKQKEAKNGR* |
Ga0068503_106811731 | 3300006340 | Marine | MDKEEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0068503_108182811 | 3300006340 | Marine | VKKKERIFDFFWSREEQYTILGLLKGRKMKKELKEHLKEEEVKNV* |
Ga0068503_111345712 | 3300006340 | Marine | MDEEEMSEEELKAVKKKERMFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0068503_111689892 | 3300006340 | Marine | LKKEEEELAAIKKRERIFDFFWTLEEQHTILGLLKGRKLKKELKEHLKKKEVK* |
Ga0068493_104206503 | 3300006341 | Marine | MSEEELKAIKKKERIFDFFWSFEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0099696_11041362 | 3300006346 | Marine | MKKIISKEESKAIKKKERVFDFFWSLEEQQTILGLLKGIKMKKKLKDKKVKNV* |
Ga0066376_106605112 | 3300006900 | Marine | MDEEEMSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHL |
Ga0066376_106677052 | 3300006900 | Marine | KKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0066372_106416632 | 3300006902 | Marine | LKKDEEELVAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKDKDVK* |
Ga0075444_103540992 | 3300006947 | Marine | MDEEEMSEEELKAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV* |
Ga0075444_103654982 | 3300006947 | Marine | MDEEEMNEEELKAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR* |
Ga0099959_11485492 | 3300007160 | Marine | KKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKDKEVKNV* |
Ga0114993_108748713 | 3300009409 | Marine | MDEEEMSEEELEAIKKREKVFDFLWSPEERRTVLGLLKGRKMKKKLKVQDLKQK* |
Ga0114993_111696302 | 3300009409 | Marine | LKKDEEELKAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR* |
Ga0114994_100811394 | 3300009420 | Marine | LKIDKKKERIFDFFWTLEEQRTILGLLRGRKMKKELKEHLKEKEAKNV* |
Ga0114994_101012545 | 3300009420 | Marine | LKIDKKKGRIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR* |
Ga0114997_102254623 | 3300009425 | Marine | LKKDEEELVAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR* |
Ga0114997_102462082 | 3300009425 | Marine | LKIDKKKERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKEKEAKNV* |
Ga0115011_101323763 | 3300009593 | Marine | MDEEELKAIKKKERMFDFLWSLEEQQTILGLLKGRKMKKELKKHLKDKDVK* |
Ga0133547_101939297 | 3300010883 | Marine | MDEEELKAIKKKERIFDFFWSPEEQRTILGLLKGRKMKKELKEHLKQKEAKDE* |
Ga0133547_105830434 | 3300010883 | Marine | MDEEELEVIKKKERIFDFFWSREEQQTILGLLKGRKMKKELKEHLKNMEMK* |
Ga0133547_108980902 | 3300010883 | Marine | LKIDKKRERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKQKEIKNG* |
Ga0133547_114423491 | 3300010883 | Marine | KDKKKERIFDFLWSLEEQHTILGLLRGRKMKKELKEHLREKEAKNV* |
Ga0211691_104736371 | 3300020447 | Marine | EELKVIKKKERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKDKEVK |
Ga0211579_101100613 | 3300020472 | Marine | MDKKERKKKHRIFDFFWTLEEQNTILGLLKGRKMKKELKEHLKEKEGKNV |
Ga0226836_107712921 | 3300021792 | Hydrothermal Vent Fluids | MSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0232639_12475112 | 3300021977 | Hydrothermal Vent Fluids | MSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0232646_10860641 | 3300021978 | Hydrothermal Vent Fluids | MDEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0209634_11545153 | 3300025138 | Marine | MDEEERKKKERIFDFFWSPEEQRTILGLLKGRKMKKELKEHLKKNAVKNEK |
Ga0208571_10336482 | 3300025232 | Deep Ocean | MDEKEMSEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0208837_10401981 | 3300025234 | Deep Ocean | MSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKNLKDKEVKNV |
Ga0208830_10592092 | 3300025238 | Deep Ocean | SEEESKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0207963_10076991 | 3300026080 | Marine | SEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0208113_10160472 | 3300026087 | Marine | MSEEESKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0207966_10192464 | 3300026119 | Marine | MDEEEMSEEELKAVKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0208879_11024831 | 3300026253 | Marine | MDEEELKAIKKKEGIFDHLWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKN |
Ga0208879_12451312 | 3300026253 | Marine | LKIDKKRERIFDFFWTLEEQHTILGLLRGRKMKKELKEHLKEKEAKNV |
Ga0209445_10771602 | 3300027700 | Marine | MNEEELKAIKKKERIFDFFWSLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0209815_11341393 | 3300027714 | Marine | MDEEEISEEELKAAKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKKHLKDKEVKNV |
Ga0209709_100740013 | 3300027779 | Marine | LKKDEEELKAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEAKNGR |
Ga0209709_102475413 | 3300027779 | Marine | LKIDKKKERIFDFFWTLEEQRTILGLLRGRKMKKELKEHLKEKEAKNV |
Ga0209035_104691212 | 3300027827 | Marine | MDEEGRKKKERIFDFFWSPEEQRTILGLLKGRKMKKELKEHLKEK |
Ga0209089_105600412 | 3300027838 | Marine | LKIDKKKERIFEFFWTLEEQRTILGLLRGRKMKKELKEHLKEKEAKNV |
Ga0209089_106773262 | 3300027838 | Marine | LKKEEEELAAIKKRERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEVKNGR |
Ga0209501_101168641 | 3300027844 | Marine | KKERIFEFFWSPEEQRTILGLLRGRKMKKELKKHLKDKEVTNV |
Ga0209404_103482642 | 3300027906 | Marine | MDEEELKAIKKKERMFDFLWSLEEQQTILGLLKGRKMKKELKKHLKDKDVK |
Ga0257108_10064335 | 3300028190 | Marine | LKKDEEELAAIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV |
Ga0257108_10462772 | 3300028190 | Marine | LKKEEEELAAIKKRERIFDFFWTLEEQHTILGLLRGRKLKKELKEHLKEKEAKNGR |
Ga0257108_11740322 | 3300028190 | Marine | MDEEELKAIKKRERIFDFFWSLEEQQTILGLLKGRKMKKELKEHLKDKEVKNV |
Ga0257107_10609551 | 3300028192 | Marine | LKKEEEELAAIKKKERIFDFFWTLEEQRTILGLLKGRKMKKELKEHLKEKEVKNGR |
Ga0257112_100439363 | 3300028489 | Marine | LKKDEEELATIKKKERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLKEKEAKNV |
Ga0257111_11358712 | 3300028535 | Marine | LKIDKKRERIFDFFWTLEEQQTILGLLKGRKMKKELKEHLREKEAKNV |
Ga0302118_104491081 | 3300031627 | Marine | LKKDKEETVDEEELEAVKKKERIFDFFWSPEEQRTILGLLKGRKMKKELKEHLKEK |
Ga0310121_102438722 | 3300031801 | Marine | MDEEELEVIKKKERIFDFFWSREEQQTILGLLKGRKMKKELKEHLKNMEMK |
Ga0310120_102451561 | 3300031803 | Marine | MDEEELEVIKKKERIFDFFWSREEQQTILGLLKGRKMKKELKEHMKNMEMK |
Ga0315324_102058193 | 3300032019 | Seawater | LKKEEEELAAIKKRERIFDFFWTLEEQHTILGLLKGRKLKKELKEHLKKKEVK |
Ga0315329_102698192 | 3300032048 | Seawater | LKKDEEELAAIKKRERIFDFFWTLEEQHTILGLLKGRKLKKELKEHLKKKEVK |
Ga0310345_118862262 | 3300032278 | Seawater | MDEEEPKALKKKLRVFDSFWSLEEQQTILGLLKGRKMKKKMKDEKGKDV |
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