NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099798

Metagenome / Metatranscriptome Family F099798

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099798
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 126 residues
Representative Sequence MRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Number of Associated Samples 97
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.77 %
% of genes near scaffold ends (potentially truncated) 66.99 %
% of genes from short scaffolds (< 2000 bps) 91.26 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (89.320 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.359 % of family members)
Environment Ontology (ENVO) Unclassified
(48.544 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.252 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208
1JGI24746J21847_10449501
2JGI24751J29686_100297351
3C688J35102_1204639611
4Ga0058862_112937971
5Ga0066823_100174163
6Ga0070689_1003959241
7Ga0070668_1001442791
8Ga0070671_1002606521
9Ga0070701_103087451
10Ga0070678_1000904963
11Ga0068867_1023535701
12Ga0070685_101457754
13Ga0070672_1001971724
14Ga0070672_1016385881
15Ga0068854_1008043292
16Ga0070702_1002479163
17Ga0068864_1001391177
18Ga0068858_1002382845
19Ga0068862_1002387422
20Ga0075368_100319121
21Ga0075026_1008131282
22Ga0075018_105174491
23Ga0075366_107562591
24Ga0097621_1017466971
25Ga0074051_100154453
26Ga0074056_100052861
27Ga0074048_133552561
28Ga0074064_116696612
29Ga0074062_130106561
30Ga0075434_1021249431
31Ga0068865_1001927812
32Ga0105240_115389151
33Ga0111538_133322092
34Ga0105241_123009191
35Ga0105242_101714513
36Ga0105248_113382331
37Ga0105237_100802742
38Ga0105238_101747343
39Ga0105249_101191204
40Ga0134125_108095002
41Ga0134125_126441402
42Ga0134124_120457501
43Ga0134127_105657952
44Ga0105246_103381621
45Ga0157298_100119451
46Ga0137413_115795121
47Ga0164299_109317001
48Ga0164301_106453852
49Ga0164308_119582671
50Ga0164307_101967161
51Ga0164305_113496022
52Ga0163162_113581811
53Ga0157375_102096242
54Ga0163163_105296371
55Ga0173483_100906573
56Ga0173478_106233312
57Ga0132258_129879151
58Ga0132258_132960133
59Ga0132256_1009787872
60Ga0132257_1013939831
61Ga0132255_1005272873
62Ga0184625_100671233
63Ga0190270_122608981
64Ga0184647_13266951
65Ga0193731_11317822
66Ga0222621_10383931
67Ga0207692_111985252
68Ga0207710_100450834
69Ga0207647_100546621
70Ga0207643_100731464
71Ga0207671_102172513
72Ga0207659_104117701
73Ga0207644_107168862
74Ga0207709_101412301
75Ga0207669_116916541
76Ga0207704_114250691
77Ga0207704_115115092
78Ga0207691_100560446
79Ga0207691_102354521
80Ga0207661_107943232
81Ga0207658_117072801
82Ga0207677_113953891
83Ga0207703_103465091
84Ga0207641_113260002
85Ga0207698_124867831
86Ga0208404_10020181
87Ga0307319_100501121
88Ga0307299_101167852
89Ga0307294_102223851
90Ga0307300_101503611
91Ga0307300_103146331
92Ga0307277_102569762
93Ga0308178_11023211
94Ga0308189_105260601
95Ga0308192_10373921
96Ga0308187_103109881
97Ga0307498_100939581
98Ga0307500_100960341
99Ga0310887_106861591
100Ga0310886_107400891
101Ga0307468_1024688982
102Ga0310892_113318252
103Ga0310890_101863542
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 24.59%    β-sheet: 0.00%    Coil/Unstructured: 75.41%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120MRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGESequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
10.7%89.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Watersheds
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Host-Associated
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Endosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
21.4%6.8%3.9%3.9%2.9%3.9%2.9%4.9%5.8%2.9%2.9%4.9%3.9%5.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24746J21847_104495013300001977Corn, Switchgrass And Miscanthus RhizosphereGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
JGI24751J29686_1002973513300002459Corn, Switchgrass And Miscanthus RhizosphereRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
C688J35102_12046396113300002568SoilDTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0058862_1129379713300004803Host-AssociatedCNVRHAHLVRCLFGRTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTCAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMEDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGERGAVKRPRTRRVRKGTARL
Ga0066823_1001741633300005163SoilRHPCAPNAGMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP*
Ga0070689_10039592413300005340Switchgrass RhizosphereTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0070668_10014427913300005347Switchgrass RhizosphereCLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMIEWPEPEGE*
Ga0070671_10026065213300005355Switchgrass RhizosphereHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0070701_1030874513300005438Corn, Switchgrass And Miscanthus RhizosphereRHPCAPNAGMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP*
Ga0070678_10009049633300005456Miscanthus RhizosphereMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0068867_10235357013300005459Miscanthus RhizosphereSSTYAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0070685_1014577543300005466Switchgrass RhizosphereAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0070672_10019717243300005543Miscanthus RhizosphereAEMLSALAACNVRHAHLVRCLFGKTRSRHPCAPNAGMRCGLPASSRRCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0070672_10163858813300005543Miscanthus RhizosphereGWSSTYAEAADTSEPPNANPIPHHRSGFDRRAAYEFPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP*
Ga0068854_10080432923300005578Corn RhizosphereMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP*
Ga0070702_10024791633300005615Corn, Switchgrass And Miscanthus RhizosphereMSVLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0068864_10013911773300005618Switchgrass RhizosphereAARAEMLSALAACNVRHAHLVRCLFGKTWSRHRYAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0068858_10023828453300005842Switchgrass RhizosphereLFGRTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0068862_10023874223300005844Switchgrass RhizosphereVPPMRGCDAPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEEAP*
Ga0075368_1003191213300006042Populus EndosphereMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEEAP
Ga0075026_10081312823300006057WatershedsCNVRHAHLVRCLFGKTRRRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANAGDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0075018_1051744913300006172WatershedsLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANAGDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESAGEEAP*
Ga0075366_1075625913300006195Populus EndosphereMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTGLICSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0097621_10174669713300006237Miscanthus RhizosphereRHPCAPNAGMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP*
Ga0074051_1001544533300006572SoilMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPKSDEEAP*
Ga0074056_1000528613300006574SoilPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP*
Ga0074048_1335525613300006581SoilLGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDRDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGEEAP*
Ga0074064_1166966123300006603SoilMLSALAACDVRHAHLVRCLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPE
Ga0074062_1301065613300006606SoilRCGLPASSRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCSVPALANANDPDMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESDEEAP*
Ga0075434_10212494313300006871Populus RhizosphereSGVGGNAPRTGCHACLFGKTRRRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRTAYEFPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP*
Ga0068865_10019278123300006881Miscanthus RhizosphereMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0105240_1153891513300009093Corn RhizosphereMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCFVPALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLVEWPESDEEAP*
Ga0111538_1333220923300009156Populus RhizosphereCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP*
Ga0105241_1230091913300009174Corn RhizosphereNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSVPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE*
Ga0105242_1017145133300009176Miscanthus RhizosphereMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTGLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0105248_1133823313300009177Switchgrass RhizosphereYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0105237_1008027423300009545Corn RhizosphereMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0105238_1017473433300009551Corn RhizosphereMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP*
Ga0105249_1011912043300009553Switchgrass RhizosphereMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0134125_1080950023300010371Terrestrial SoilMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWSESEGEEAP*
Ga0134125_1264414023300010371Terrestrial SoilRRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESDEEAP*
Ga0134124_1204575013300010397Terrestrial SoilMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0134127_1056579523300010399Terrestrial SoilMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLLAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0105246_1033816213300011119Miscanthus RhizosphereWSSTYAEAADTSEPPNASPIPHHRSGFNRCAAYEFPCSVPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0157298_1001194513300012913SoilMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPEGEEAP*
Ga0137413_1157951213300012924Vadose Zone SoilMRCGLPASSRQLGRCLGWSSTYADGAGTSEPPNASPIPHHRSGFDRRAACDIPCSVPAFAIANDPNMDDRPKTRLICRRCGARMKLARQLPWLDHRLPAILLFQCTDCGYVDMVEWPESEGEEAP*
Ga0164299_1093170013300012958SoilSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0164301_1064538523300012960SoilMRCGLPASFRQCGRYPGWSSTYAEAADTSEPPNASPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP
Ga0164308_1195826713300012985SoilSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSVPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMIEWPEPEGE*
Ga0164307_1019671613300012987SoilMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLSWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0164305_1134960223300012989SoilMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPRLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0163162_1135818113300013306Switchgrass RhizosphereAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0157375_1020962423300013308Miscanthus RhizosphereMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQSKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEG*
Ga0163163_1052963713300014325Switchgrass RhizosphereTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0173483_1009065733300015077SoilMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP*
Ga0173478_1062333123300015201SoilADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE*
Ga0132258_1298791513300015371Arabidopsis RhizosphereMRGCDAPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP*
Ga0132258_1329601333300015371Arabidopsis RhizosphereEDADTSEPPNATPIPHHRSGFGRRAAYDIPCFVPALAADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEPEGE*
Ga0132256_10097878723300015372Arabidopsis RhizosphereMRCSLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0132257_10139398313300015373Arabidopsis RhizosphereMRGCDAPASSRQCGRCLGWSSTYAEDADTSEPPNATPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE*
Ga0132255_10052728733300015374Arabidopsis RhizosphereMRCGLPASFRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEGEEAP
Ga0184625_1006712333300018081Groundwater SedimentMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNANPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQAPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGEEA
Ga0190270_1226089813300018469SoilCLGWSSTCAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESDEEAP
Ga0184647_132669513300019263Groundwater SedimentMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGFDRRAAYDIPRSVPALANANDPNMDDQPKTRLICRRRAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEDALR
Ga0193731_113178223300020001SoilCSIGLSSGVGGNARRTGCMQCPSCSPSSMLVRKDPETAPLCPNAGMRCGLPASSRQLGRCLGWSSTYADAADTSEPPNASPIPHHRSGFNRLAAYDIPCSVPALANANDPDMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMIEWPESAGEEAP
Ga0222621_103839313300021510Groundwater SedimentMLSALAACNVRHAHLVRCLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYADGADTSEPPNASPIPHHRSGFNRLAAHDIPCSVPALANANDPDMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMI
Ga0207692_1119852523300025898Corn, Switchgrass And Miscanthus RhizosphereMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207710_1004508343300025900Switchgrass RhizosphereMSVLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207647_1005466213300025904Corn RhizospherePASSPQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207643_1007314643300025908Miscanthus RhizosphereAARAELHSALAAYNVRHAHLVRCLFGKTRSWHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRCAAYEFPCSVPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207671_1021725133300025914Corn RhizosphereMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207659_1041177013300025926Miscanthus RhizosphereADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207644_1071688623300025931Switchgrass RhizosphereAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207709_1014123013300025935Miscanthus RhizosphereAHLVRCLFGRTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207669_1169165413300025937Miscanthus RhizosphereLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWP
Ga0207704_1142506913300025938Miscanthus RhizosphereLGWSSTYAEVADMSEPPNASPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGEEAP
Ga0207704_1151150923300025938Miscanthus RhizosphereRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207691_1005604463300025940Miscanthus RhizosphereMLSALAACNVRHAHLVRCLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207691_1023545213300025940Miscanthus RhizosphereHAHLVRCLFGKTRSWHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRCAAYEFPCSVPALANAHDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPESDEEAP
Ga0207661_1079432323300025944Corn RhizosphereCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207658_1170728013300025986Switchgrass RhizosphereRTGCHACLFGKTWRQHPCAPNAGMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPEG
Ga0207677_1139538913300026023Miscanthus RhizosphereSSGVGGNAPRTGCHLCLFGKTRRRHPCAPNAGMRCGLPASSRQCGRYPGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDIPCFVANANDPDMDDQPKTRLICSRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEEAP
Ga0207703_1034650913300026035Switchgrass RhizosphereCPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207641_1132600023300026088Switchgrass RhizosphereARAEMLSALAACNVRHAHLVRCLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0207698_1248678313300026142Corn RhizosphereLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0208404_100201813300026855SoilMLSALAACDVRHAHLVRCLFGRTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMIEWPESAGEEAP
Ga0307319_1005011213300028722SoilGSLASSRQCGRCLGWSSTYADGADTSEPPNASPIPHHRSGFNRLAAYDIPCSVPALANANDPDMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP
Ga0307299_1011678523300028793SoilSGRSSSVGGNASALAACNVRHAHLVRCLFGKTRRRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYADGADTSEPPNASPIPHHRSGFNRHAANANDPNMDDQPKTRLICRRCGARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMIEWPESAGEEAP
Ga0307294_1022238513300028810SoilPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP
Ga0307300_1015036113300028880SoilMLSALAACNVRHAHLVRCLFGKTRSRHPCAPNAGMQCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVEWPESDEE
Ga0307300_1031463313300028880SoilMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASTIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQVPWLDHRLPAVLLFHCIDCGHVDMVEWPESEGERGAVKRPRTRRVR
Ga0307277_1025697623300028881SoilLPASSRQCGRCLGWSSTYADGADTSEPPNASPIPHHRSGFNRLAAYDIPCSVPALANANDPDMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMVE
Ga0308178_110232113300030990SoilTRLAVATLTSSRPRGGAYSCRVRAALPSFSDTDRCSFGRNRKRHRSAPNAGMRCGLPASSRQCGRCLGWSSTYAEAADTSEPPNASPIPHHQSGFNRRAAHDIPCSVTALANANDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCADCGHVDMVEWPESEGEEAP
Ga0308189_1052606013300031058SoilMRCGLPASCRQRGRCLGWSSTYVEAADTSEPPNASPIPHHRSGFNRLAAYDIPCSVPALANANDPDMDDQPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESEGEEAP
Ga0308192_103739213300031082SoilAGMLSALAACNVRHAHLVQCLIGKTRRRHRRAPNAGMRCGLPASSRQCGRCLGWSSTYADGADTSEPPNASPIPHHRSGFDRRAAYDIPCSVPALANANDQTWDDRPKTRLICRCGARMKLARQLPWLDHRLPAILLFQCTDCGHVDMVEWPESEGEEDALR
Ga0308187_1031098813300031114SoilCLFGKTRRRHPCAPNAGMRCGLPASFRQCGRCLGWSSTYAEVADTSELPNANPIPHHRSGSDRRAGYDIPCFVANANDPDWMTSQTRLTCSRCAARMKLARQAPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP
Ga0307498_1009395813300031170SoilGVGGNAPRSGCHACLFGKTRSRHPCAPNAGMRCGLPASSRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGFNRRAACDIPCSVPALANANDPDMDDQPTTRLICRRCAARMKLARQLPWLDHRLPAVLLFQCIDCGHVDMIEWRESAGEEAP
Ga0307500_1009603413300031198SoilSSGVGGNAPRTGCQACLFGKTRRRHPCAPNAGMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQVPWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP
Ga0310887_1068615913300031547SoilGRTRSRHPCAPNAGMRCGLPASSRQCGRCLGWPSTYAEAADTSEPPNASPIPHHRSGSNRRAAYEFPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0310886_1074008913300031562SoilPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRHAGYDIPCFVANADDPDMDDQPKTRLICSRCAARMKLARQLSWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP
Ga0307468_10246889823300031740Hardwood Forest SoilWSSTYAEAADTSEPPNASPIPHHRSGFDRRAAYEFPCSAPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0310892_1133182523300031858SoilCLGWSSTYAEAADTSEPPNASPIPHHRSGFNRRAAYDIPCSVPALANADDPNMDDQPKTRLICRRCAARMKLARQLPWLDHRLPAILLFQCIDCGHVDMVEWPEPEGE
Ga0310890_1018635423300032075SoilMRCGLPASFRQCGRCLGWSSTYAEVADTSEPPNASPIPHHRSGSDRRAAYDILCFVANADDPDMDDQPKTRLICSRCAARMKLARQLSWLDHRLPAVLLFQCIDCGHVDMVEWPESEGEEAP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.