Metagenome / Metatranscriptome Family F099699

Basic Information
Family ID	F099699
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	85 residues
Representative Sequence	ENAIVSATERTNPDCVIVPLDEPSAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Number of Associated Samples	85
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.243 % of family members)
Environment Ontology (ENVO)	Unclassified (33.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.05% β-sheet: 30.95% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13620	CarboxypepD_reg	14.56
PF02563	Poly_export	5.83
PF00196	GerE	5.83
PF13180	PDZ_2	0.97
PF13807	GNVR	0.97
PF01757	Acyl_transf_3	0.97
PF02350	Epimerase_2	0.97
PF14534	DUF4440	0.97
PF04932	Wzy_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	5.83
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.97
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.97

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.35%
Aquatic	Environmental → Aquatic	11.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.35%
Freshwater	Environmental → Aquatic → Freshwater	9.71%
Sediment	Environmental → Aquatic → Sediment	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.65%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Clay	Environmental → Terrestrial → Soil → Clay	1.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_128200003	3300000789	Soil	IVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC*
Ga0008090_138641852	3300005363	Tropical Rainforest Soil	AIRAEPDIAIVGDVTEENAIVPATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA*
Ga0070709_105981341	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLYNTIREQPDVEVVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC*
Ga0070710_100233852	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLYNTIREQPDVEVVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC*
Ga0070711_1013764482	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC*
Ga0066903_1010992751	3300005764	Tropical Forest Soil	GAAMPICKKILTKRPHIRIVAIGEGTDIVEIYWMSEEGDIRCTYTTASREAILRALHFSTA*
Ga0070766_111246522	3300005921	Soil	RTNPDCVIVPLDLPGAAMPICTEILAKRPHVRIVAIGEGSDVVEIYWMSDERNIRRTYTTASRESIVRALHFSTC*
Ga0075028_1002619101	3300006050	Watersheds	ELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSTC*
Ga0075014_1001140112	3300006174	Watersheds	MLYNTIREQPDVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC*
Ga0070712_1001359262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLYNTIREQPDVEIVGDVSDEHAIIAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC*
Ga0126374_100139493	3300009792	Tropical Forest Soil	MLYDAIRAEPDIAIVGDVTEENAIVPATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA*
Ga0126373_110562521	3300010048	Tropical Forest Soil	IRAEPDIAIVGDVTEENAIVAATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA*
Ga0126373_123003721	3300010048	Tropical Forest Soil	LDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA*
Ga0074046_106222622	3300010339	Bog Forest Soil	ERTNPDCLIVPLDKPGAAMAICTEILAKRPHVRIVAIGEETDVVEIYWMTEGGDIRCTYTTASREAILRALHFSTC*
Ga0074045_100786663	3300010341	Bog Forest Soil	MLYETIREESDIEVVGDVSEENAIVSATERTNPDCLIVPLDEPGVSISMYTTILARRPHVRIVAIGDGTDVVEIYWKSEEGHLRRTYSTASREAILKALHFSTT*
Ga0074045_105655302	3300010341	Bog Forest Soil	IVPLDEPGAAMPICTEILAKRPHVRIVAIGEETDVVEIYWMTEGGDIRCTYTTASREAILRALHFSTC*
Ga0126379_107262481	3300010366	Tropical Forest Soil	DEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA*
Ga0126381_1012346111	3300010376	Tropical Forest Soil	MLYDAIRAEPDIAVVGDVTEENAIVPATELTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA*
Ga0126381_1018183012	3300010376	Tropical Forest Soil	LDEPCAAMPICKKILTKRPHIRIVAIGEGTDVVEDYWMSEEGDIRCTYTTASREAILRALHFSIA*
Ga0126381_1043412582	3300010376	Tropical Forest Soil	VPLDEPGAAMPICKKILTKRPHIRIVAIGESTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA*
Ga0136449_1001383994	3300010379	Peatlands Soil	MLYDTIREEQDIEIVGDVSEENAIVPATERTNPDCLIVPLDESGAEMSICAQILARRPHIRIVAIGEGTDVVEIYWMSEEGDIRRTYTTASREAILRALHFSTC*
Ga0136449_1027169851	3300010379	Peatlands Soil	MLYDTIREESDIEIVGDVSEDNAIVPATERTNPDCLIVPLDEPGAAMPICTEILAKRPHLRIVAIGEGTDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTC*
Ga0126369_111365851	3300012971	Tropical Forest Soil	MLYDTIREESDIEVVGDVSEENAIVPATERTNPDCLIVPLDDPGVSLSMYTTILTRRPHVRIVAIGEGTDVVEVYWMSEEGNIRKTYSTASREAILRALHFSTT*
Ga0126369_131599711	3300012971	Tropical Forest Soil	ICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASYEAILRALHFSSA*
Ga0181538_107263902	3300014162	Bog	ERDIEVVGDVSEENAIVPATERTNPDCLIVPLDESGAEMSICAQILARRPHIRIVAIGEGTDVVEIYWMSEEGDIRRTYTTASREAILRALHFSTC*
Ga0181532_105601712	3300014164	Bog	IEVVGDVSEENAIVPATERTNPDCLIIPLGESALAIPICREILKKRPHVRIVAIGEGTDVVEIYWMSEEGDMRRTYTTASREAILRALHFSTC*
Ga0181532_108142851	3300014164	Bog	ENAIVPATERTNPDCLIIPLGESALAIPICREILTKRPHVRIVAIGEGTDVVEIYWMSEEGDMRRTYTTASREAILRALHFSTC*
Ga0182032_100970021	3300016357	Soil	EENAIVSATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMCEEGDIRCTYTTASREAILRALHFSTA
Ga0182032_110416941	3300016357	Soil	LDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA
Ga0182032_115398871	3300016357	Soil	LDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA
Ga0182040_107301971	3300016387	Soil	MAICKKILTKRPHIRIVAIGEGTDVVEIYWMSEEGDMRCTYTTASREAILRALHFSTA
Ga0182039_116438342	3300016422	Soil	EESAIVPATERTNPDCVIVPLDLPGAAMPICTQILSKRPNVRIVAIGDGPDVVEIYWMSDERNIRCTYTTASRAAIVKALHFSSC
Ga0187825_103827052	3300017930	Freshwater Sediment	VSEESAIVPATERTNPDCVIVPLDLPGAALPICTQILSRRPHVRIVAIGEGSDVVEIYWMSDERNIRRTYTTASRESIVRALHFSTC
Ga0187819_101000844	3300017943	Freshwater Sediment	IVPLDLPGAAMPICTQILSRRPNVRIVAIGEGSDVVEIYRMSDEKNIRRTYTTASRAVIVKALHFSSC
Ga0187785_106611082	3300017947	Tropical Peatland	VPATERTNPDCVIVPLDEPGVSLSMYTTILMRRPHVRIVAIGDGTDVVEIYWKSEEGDIRRTYSTASREAILKALHFSTT
Ga0187817_103000462	3300017955	Freshwater Sediment	IEVVGDVSEENAIVPATERTNPDCLIVPLDEPGAAMQICTAILAKRPHVRIVAIGEGTDVVEIYWMTEEGDIRRTYTTASREAILRALHFSAC
Ga0187817_107338841	3300017955	Freshwater Sediment	VVGDVSEESAIVPATERTNPDCVIVPLDLPGAAMPICTQILSKRPNVRIVAIGEASDVVEIYWMSDEKNIRRTYTTASRAAIVKALHFSSC
Ga0187779_109441712	3300017959	Tropical Peatland	VIVPLDEPGVSLSMYTTILMRRPKVRIVAIGEGTDVVEIYWKSEEGDIRRTYSTASREAILKALHFSTT
Ga0187777_113436051	3300017974	Tropical Peatland	ENAIVYATERTNPDCVIVPLDESGVSLSMYTTILMRRPNVRIVAIGDGTDVVEIYWKSEEGDIRRTYSTASREAIVKALHFSTT
Ga0187816_101260181	3300017995	Freshwater Sediment	ESAIVPATERTNPDCVIVPLDLPGAALPICTQILSRRPHVRIVAIGEGSDVVEIYWMSDERNIRRTYTTASRESIVRALHFSTC
Ga0187815_104741381	3300018001	Freshwater Sediment	AIVPATERTNPDCVIVPLDLPGAALPICTQILSRRPHVRIVAIGEGSDVVEIYWMSDERNIRRTYTTASRESIVRALHFSTC
Ga0187766_102792352	3300018058	Tropical Peatland	VLYDTIREESDIEVVGDVSEENAIFSATERTNPDCVIVPLDEPGVSLSMYTTILMRRPNVRIVAIGDGTDVVEIYWKSEEGDIRRTYSTASREAIVKALHFSTT
Ga0187784_108021502	3300018062	Tropical Peatland	MLYDTIREESDIEVVGDVSEKNAIVPAIERTKPDCLIVPLDEPGVGMPMYTTILTKRPHVRIVAIGEGTDVVEIYWMSEEGHIRRTYSTASRESILRALHFSAA
Ga0187769_112997812	3300018086	Tropical Peatland	ICTEILTKRPHVLIVAIGEGSDVVGIYWKTEEGDIRRTYTTASREAIVRALHFSTC
Ga0187771_103204441	3300018088	Tropical Peatland	NPDCVIVPLDEPGVAMPICTEILTKRPNVRIVAIGEGTDVVGIYWKTEEGDIRRTYTTASREAIVRALHFSTC
Ga0210395_103689202	3300020582	Soil	CVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC
Ga0210388_103581852	3300021181	Soil	MLYNTIREQPDVEIVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTG
Ga0210387_101010303	3300021405	Soil	NPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0210383_101376361	3300021407	Soil	VVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTG
Ga0210394_101904243	3300021420	Soil	SDEDAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC
Ga0210384_100965102	3300021432	Soil	MLYNTIREQPDVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC
Ga0210410_109938301	3300021479	Soil	MLYNTIREQPDVEVVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSTC
Ga0210409_106528362	3300021559	Soil	SAIVPATERTNPDCVIVPLDLPGAAMPICTQILSRRPNVRIVAIGEGSDVVEIYWMSDEKNIRLTYTTASRASIVKALHFSSC
Ga0126371_107179472	3300021560	Tropical Forest Soil	DVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICSQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFATR
Ga0242654_103910142	3300022726	Soil	DMLYNTIREQPDVEIVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0207692_101819012	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IREQPDVEIVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0207663_103205762	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLYNTIREQPDVEVVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0207804_1103231	3300026849	Tropical Forest Soil	ENAIVSATERTNPDCVIVPLDEPSAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0207818_10083902	3300026868	Tropical Forest Soil	IEVVGDVTEENAIVSATERTNPDCVIVPLDEPSAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0207824_10149162	3300026990	Tropical Forest Soil	GDVTEENAIVSATERTNPDCVIVPLDEPSAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0207777_10321242	3300027330	Tropical Forest Soil	CVIVPLDEPSAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0209040_101345671	3300027824	Bog Forest Soil	CLIVPLDKPGAAMAICTKILAKRPHVRIVAIGEGTDVVEIYWMSEGGDVRRTYTTSSREAILRALHFSTC
Ga0209701_103367902	3300027862	Vadose Zone Soil	LIVPLDEPGAAMPICTEILAKRPHVRIVAIGEGTDVVEIYWMSEEGDIRRTYTTASREAILWALHFSTC
Ga0075373_115216072	3300030945	Soil	MLYNTIREQPDVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0318534_108303902	3300031544	Soil	AMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0307374_102410242	3300031670	Soil	VVGDVSEEAAIVAATERTEPDCLIVPLNDPDAPMPMCTEMLAKRPHLRIVAIGEGTNILAIYWRSPEGKVRCTYTTASRQSILRALRF
Ga0307373_1000915815	3300031672	Soil	VVGDVSEEAAIVAATERTEPDCLIVPLNDPDAPMPMCTEILAKRPHLRIVAIGEGTNILAIYWRSPEGKVRCTYTTASRQSILRALRFMTA
Ga0318561_104310701	3300031679	Soil	VPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA
Ga0306917_110018031	3300031719	Soil	IEVVGDVTEENAIVSATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMCEEGDIRCTYTTASREAILRALHFSTA
Ga0307469_102666022	3300031720	Hardwood Forest Soil	MLYNTIREQPDVEIVGDVSDEHAIIAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0307477_103182782	3300031753	Hardwood Forest Soil	EQPDVEVVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC
Ga0307475_102845761	3300031754	Hardwood Forest Soil	MLYNTIREQPDVEVVGDVSDEDAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTA
Ga0318537_101781181	3300031763	Soil	IAVVGDVTEENAIVPATELTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA
Ga0318554_102129712	3300031765	Soil	AMAICKKILTKRPHIRIVAIGEGTDVVEIYWMSEEGDMRCTYTTASREAILRALHFSTA
Ga0318548_106186282	3300031793	Soil	YDAIRVEPDIAIVGDVTEENAIVPATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA
Ga0318568_103227512	3300031819	Soil	RTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA
Ga0307473_100634892	3300031820	Hardwood Forest Soil	MLYNTIREQPDVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSIC
Ga0306919_106459961	3300031879	Soil	DCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0306919_111269671	3300031879	Soil	DVTEENAIVPATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA
Ga0306925_105262042	3300031890	Soil	VGDVTEENAIVSATERTNPDCVIVPLDEPGAAMPICKQILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0306923_102775253	3300031910	Soil	IVSATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEATDVVEIYWMCEEGDIRCTYTTASREAILRALHFSTA
Ga0306923_123007982	3300031910	Soil	RIWRDMLYDAIRAEPDIAVVGDVTEENAIVPATELTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0306923_123244721	3300031910	Soil	GAAMPIFKKILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFST
Ga0306923_124459921	3300031910	Soil	DCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA
Ga0310912_102911572	3300031941	Soil	DIEVVGDVSEESAIVPATERTNPDCVIVPLDLPGAAMPICTQILSKRPNVRIVAIGEGSDVVEIYWMSDERNIRCTYTTASRAAIVKALHFSSC
Ga0310912_106144712	3300031941	Soil	DCVIVPLDEPSAAVPICKKILTKRPRIRIVAIGEGTDVVEIYWMSEEGDIRCTYTTASREAIVRALHFSTA
Ga0310916_105806411	3300031942	Soil	TERTNPDCVIVPLDEPSAAVPICKKILTKRPRIRIVAIGEGTDVVEIYWMSEEGDIRCTYTTASREAIVRALHFSTA
Ga0310916_115873282	3300031942	Soil	EPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEGDIRCTYTTASREAILRALHFSTA
Ga0310910_107691932	3300031946	Soil	PICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0310909_105998862	3300031947	Soil	CVIVPLDLPGAAMPMCTQILSKRPNVRIVAIGEGSDVVEIYWMSDERNIRCTYTTASRAAIVKALHFSSC
Ga0310909_109809612	3300031947	Soil	MLYDAIRAEPDIAVVGDVTEENAIVPATELTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEVYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0306926_102441941	3300031954	Soil	MLYDAIRAEPDVAVVGDVTEENAIVSATERTNPDCVIVPLDEPGAAMPICKQILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0306926_103220151	3300031954	Soil	TNPDCVIVPLDEPGAAMAICKKILTKRPHIRIVAIGEGTDVVEIYWMSEEGDMRCTYTTASREAILRALHFSTA
Ga0306922_112725251	3300032001	Soil	PICKQILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0318510_100511151	3300032064	Soil	IVGDVTEENAIVPATERTNPDCVIVPLDEPGAAMPICKKILTKRPHIRIVAIGEGTDVVEIYWMAEEGDIRCTYTTASREAILRALHFSTA
Ga0318514_106946812	3300032066	Soil	NPDCVIVPLDEPGAAMPICKQILTKRPHIRIVAIGEATDVVEIYWMSEEGDIRCTYTTASREAILRALHFSTA
Ga0307470_102924322	3300032174	Hardwood Forest Soil	QPDVEIVGDVSDEHAIIAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDEGDIRRTYTTASREAIVRALHFSAC
Ga0307471_1007909162	3300032180	Hardwood Forest Soil	VVGDVSEEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0307472_1004111662	3300032205	Hardwood Forest Soil	WRDLLYNTIREQPDVEVVGDVSDEHAIVAAVERTNPDCVIVPLELPAAAMPICTQILSKRPTARIVAIGEASDVVEIYWLSDERDIRRTYTTASREAIVRALHFSTC
Ga0306920_1000614581	3300032261	Soil	ATERTNPDCVIVPLDEPSAAVPICKKILTKRPRIRIVAIGEGTDVVEIYWMSEEGDIRCTYTTASREAIVRALHFSTA
Ga0335070_101547102	3300032829	Soil	MLYDTIREESDIEVVGDVSEENAIVSATERTNPDCLIVPLDEPGVSLSMYTTILARRPHVRIVAIGDGTDVVEIYWKSEEGDIRRTYSTASREAILRALHFSTA
Ga0335069_100079102	3300032893	Soil	VVGDVSEENAIVSATERTNPDCLIVPLDEPGVSLSMYTTILARRPHVRIVAIGDGTDVVEIYWKSEEGDIRRTYSTASREAILRALHFSTA
Ga0310914_108963271	3300033289	Soil	ATERTNPDCVIVPLDEPGAAMAICKKILTKRPHIRIVAIGEGTDVVEIYWMSEEGDMRCTYTTASREAILRALHFSTA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099699

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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