Metagenome / Metatranscriptome Family F099669

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	78 residues
Representative Sequence	ARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Number of Associated Samples	90
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.91 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.583 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (21.359 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.136 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.05% β-sheet: 0.00% Coil/Unstructured: 28.95%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF13419	HAD_2	29.13
PF08281	Sigma70_r4_2	5.83
PF07045	DUF1330	5.83
PF01872	RibD_C	3.88
PF00400	WD40	2.91
PF00440	TetR_N	2.91
PF13676	TIR_2	2.91
PF03466	LysR_substrate	1.94
PF01844	HNH	1.94
PF08242	Methyltransf_12	1.94
PF01177	Asp_Glu_race	1.94
PF03050	DDE_Tnp_IS66	0.97
PF02720	DUF222	0.97
PF01494	FAD_binding_3	0.97
PF13360	PQQ_2	0.97
PF03417	AAT	0.97
PF13613	HTH_Tnp_4	0.97
PF08241	Methyltransf_11	0.97
PF02736	Myosin_N	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	5.83
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	3.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	3.88
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.94
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.97
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.97
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.97
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.97
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.58 %
Unclassified	root	N/A	19.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.58 %
Unclassified	root	N/A	19.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.58 %
Unclassified	root	N/A	19.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.02 %
Unclassified	root	N/A	19.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.11 %
Unclassified	root	N/A	19.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.28 %
Unclassified	root	N/A	19.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	22.33 %
Unclassified	root	N/A	19.42 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.94 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.97 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	22.33 %
Unclassified	root	N/A	19.42 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.97 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	22.33 %
Unclassified	root	N/A	19.42 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	4.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.97 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.97 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.97 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.97 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	22.33 %
Unclassified	root	N/A	19.42 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	4.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.94 %
Geodermatophilus tzadiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus tzadiensis	0.97 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.97 %
Actinomadura parvosata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura parvosata	0.97 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	0.97 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02GHYGP	Not Available	510	Open in IMG/M
3300004016\|Ga0058689_10127980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	565	Open in IMG/M
3300005158\|Ga0066816_1011353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300005330\|Ga0070690_100252235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1248	Open in IMG/M
3300005337\|Ga0070682_100141022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1643	Open in IMG/M
3300005364\|Ga0070673_102349418	Not Available	507	Open in IMG/M
3300005434\|Ga0070709_10532596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300005434\|Ga0070709_11180493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300005435\|Ga0070714_102122543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300005435\|Ga0070714_102514892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	500	Open in IMG/M
3300005436\|Ga0070713_101983960	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005437\|Ga0070710_10467589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	858	Open in IMG/M
3300005438\|Ga0070701_10566290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	747	Open in IMG/M
3300005439\|Ga0070711_100196020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1555	Open in IMG/M
3300005444\|Ga0070694_101911722	Not Available	507	Open in IMG/M
3300005458\|Ga0070681_10820094	Not Available	848	Open in IMG/M
3300005471\|Ga0070698_101022869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300005547\|Ga0070693_100208917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1273	Open in IMG/M
3300005549\|Ga0070704_101190796	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005577\|Ga0068857_100606539	Not Available	1035	Open in IMG/M
3300005841\|Ga0068863_101281536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	739	Open in IMG/M
3300005842\|Ga0068858_101272928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300006028\|Ga0070717_10983189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300006175\|Ga0070712_100020220	All Organisms → cellular organisms → Bacteria	4354	Open in IMG/M
3300006237\|Ga0097621_100090430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2561	Open in IMG/M
3300006804\|Ga0079221_10162063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1183	Open in IMG/M
3300006871\|Ga0075434_101116205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300006903\|Ga0075426_10679393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	772	Open in IMG/M
3300009011\|Ga0105251_10269487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300009012\|Ga0066710_102757963	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009101\|Ga0105247_10692149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	766	Open in IMG/M
3300009137\|Ga0066709_102612489	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009137\|Ga0066709_103511143	Not Available	569	Open in IMG/M
3300009174\|Ga0105241_10374477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	1242	Open in IMG/M
3300009176\|Ga0105242_11327070	Not Available	744	Open in IMG/M
3300009545\|Ga0105237_10062794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3714	Open in IMG/M
3300009551\|Ga0105238_12175839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	589	Open in IMG/M
3300010320\|Ga0134109_10467631	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010371\|Ga0134125_10574722	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300010371\|Ga0134125_11994538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	631	Open in IMG/M
3300010373\|Ga0134128_10443207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1449	Open in IMG/M
3300010399\|Ga0134127_10282380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1590	Open in IMG/M
3300010400\|Ga0134122_10240969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1522	Open in IMG/M
3300012208\|Ga0137376_10102491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2426	Open in IMG/M
3300012356\|Ga0137371_10125372	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300012360\|Ga0137375_10672825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	850	Open in IMG/M
3300012490\|Ga0157322_1009076	All Organisms → cellular organisms → Bacteria → Terrabacteria group	774	Open in IMG/M
3300012685\|Ga0137397_11103949	Not Available	577	Open in IMG/M
3300012929\|Ga0137404_10792483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	860	Open in IMG/M
3300014745\|Ga0157377_10839219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	681	Open in IMG/M
3300014745\|Ga0157377_10888965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300014968\|Ga0157379_10335509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	1382	Open in IMG/M
3300015241\|Ga0137418_10765724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300015262\|Ga0182007_10162805	All Organisms → cellular organisms → Bacteria → Terrabacteria group	763	Open in IMG/M
3300015264\|Ga0137403_10626445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300015372\|Ga0132256_103141726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	555	Open in IMG/M
3300015373\|Ga0132257_102397249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	685	Open in IMG/M
3300017947\|Ga0187785_10241062	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300018058\|Ga0187766_10113579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1654	Open in IMG/M
3300020081\|Ga0206354_10953922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	786	Open in IMG/M
3300020581\|Ga0210399_10325812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1282	Open in IMG/M
3300020583\|Ga0210401_11248660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300021403\|Ga0210397_10139023	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300021403\|Ga0210397_10339955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300021405\|Ga0210387_11488732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	580	Open in IMG/M
3300021479\|Ga0210410_11146394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300024317\|Ga0247660_1093058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	520	Open in IMG/M
3300025898\|Ga0207692_10689655	Not Available	662	Open in IMG/M
3300025906\|Ga0207699_10017019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3815	Open in IMG/M
3300025906\|Ga0207699_11442560	Not Available	509	Open in IMG/M
3300025914\|Ga0207671_10330120	Not Available	1208	Open in IMG/M
3300025915\|Ga0207693_10048006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3353	Open in IMG/M
3300025915\|Ga0207693_10603601	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025915\|Ga0207693_10667421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	807	Open in IMG/M
3300025920\|Ga0207649_10424991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	998	Open in IMG/M
3300025928\|Ga0207700_10850658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300025928\|Ga0207700_11993944	Not Available	507	Open in IMG/M
3300025929\|Ga0207664_10349147	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300025929\|Ga0207664_10641632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	954	Open in IMG/M
3300025939\|Ga0207665_10103315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1993	Open in IMG/M
3300025939\|Ga0207665_10201851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1449	Open in IMG/M
3300025949\|Ga0207667_11762811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura parvosata	584	Open in IMG/M
3300025960\|Ga0207651_11793022	Not Available	552	Open in IMG/M
3300026088\|Ga0207641_11463210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	684	Open in IMG/M
3300026116\|Ga0207674_10773379	Not Available	927	Open in IMG/M
3300026142\|Ga0207698_12292575	Not Available	552	Open in IMG/M
3300028782\|Ga0307306_10163252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	625	Open in IMG/M
3300028807\|Ga0307305_10102949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	1319	Open in IMG/M
3300028819\|Ga0307296_10728607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	541	Open in IMG/M
3300028881\|Ga0307277_10073741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	1419	Open in IMG/M
3300028885\|Ga0307304_10282058	All Organisms → cellular organisms → Bacteria → Terrabacteria group	730	Open in IMG/M
3300031170\|Ga0307498_10158962	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031184\|Ga0307499_10127666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	725	Open in IMG/M
3300031572\|Ga0318515_10223441	Not Available	1010	Open in IMG/M
3300031751\|Ga0318494_10452568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus tzadiensis	747	Open in IMG/M
3300032174\|Ga0307470_11662259	Not Available	536	Open in IMG/M
3300032770\|Ga0335085_10407860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1575	Open in IMG/M
3300032770\|Ga0335085_12134100	Not Available	565	Open in IMG/M
3300032783\|Ga0335079_10953655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300032828\|Ga0335080_10494023	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300032892\|Ga0335081_11861654	Not Available	648	Open in IMG/M
3300032955\|Ga0335076_11758745	Not Available	509	Open in IMG/M
3300034818\|Ga0373950_0009244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.84%
Host-Associated	Host-Associated	28.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.84%
Plants	Host-Associated → Plants	28.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.74%
Roots	Host-Associated → Plants → Roots	0.97%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.92%
Loam	Environmental → Terrestrial → Soil → Loam	28.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.97%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	28.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_10792170	2170459005	Grass Soil	AAALRIARTAPVNPADQGPDVPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVAVAAVVLGGYLMIAVRSA
Ga0058689_101279802	3300004016	Agave	TAPINPADQGPDAPVTAPPWLLTRAGSVLLGVAAAWPTLRAVYAGHVDASTFGAQVVVAAVVLGGYLMLAARSGY*
Ga0066816_10113531	3300005158	Soil	ARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVAVAAVVLGGYLMIAVRSA*
Ga0070690_1002522351	3300005330	Switchgrass Rhizosphere	WPLLGLAAGPGTAAAALRIARTAPVNPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYSGQVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070682_1001410222	3300005337	Corn Rhizosphere	LGLAAGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0070673_1023494181	3300005364	Switchgrass Rhizosphere	VTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0070709_105325961	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IARTAPVNPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRPV*
Ga0070709_111804932	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGVVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070714_1021225432	3300005435	Agricultural Soil	ALWPVLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYTGHVHASTFGAQVVVAAVVLGGYLMLAVRAV*
Ga0070714_1025148921	3300005435	Agricultural Soil	APPWLLTRAGSVLLGLAAAWPTLRAVYAGQVHASTFGAQVAFAAVVLGGYLMLGVRSV*
Ga0070713_1019839601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AALRIARTAPINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAHASTFGAQVVFAAVVLGGYLMLAVRSA*
Ga0070710_104675892	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TAALRIARTAPINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGQVHASTFGAQVAFAAVVLGGYLMLGVRSV*
Ga0070701_105662903	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070711_1001960204	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVWLALALALLAVTGELPGALWPLLGLAAGPGTAAAALRIARTAPVNPADQGPDAPVTAPPWLLTRAGSLLLGLIATWPTLRAVYAGQVHASTFGAQVVFAAVVLGGYLMIAVRPV*
Ga0070694_1019117221	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTAPPWLLTRAGSLLLGLIATWPTLRAVYAGQVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0070681_108200942	3300005458	Corn Rhizosphere	TAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0070698_1010228691	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070693_1002089173	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	PDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVDTSTFVAQVVVAAVVLGGYLMLAVRSV*
Ga0070704_1011907961	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0068857_1006065392	3300005577	Corn Rhizosphere	GPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0068863_1012815362	3300005841	Switchgrass Rhizosphere	PINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0068858_1012729282	3300005842	Switchgrass Rhizosphere	TAPINPADQGPDAPVTAPPWLLTRAGSALLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070717_109831892	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0070712_1000202206	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0097621_1000904301	3300006237	Miscanthus Rhizosphere	DQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0079221_101620634	3300006804	Agricultural Soil	AALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLAAAWPTLRAVYSGHAHASTFGAQVAFAAVVLGGYLMIAVRSV*
Ga0075434_1011162053	3300006871	Populus Rhizosphere	AAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAPVVLGGYLMLAVRSV*
Ga0075426_106793931	3300006903	Populus Rhizosphere	INPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0105251_102694871	3300009011	Switchgrass Rhizosphere	AAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0066710_1027579632	3300009012	Grasslands Soil	AALRIARTAPINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAYASTFGAQVVFAAVVLGGYLMIAVRSA
Ga0105247_106921491	3300009101	Switchgrass Rhizosphere	AALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0066709_1026124892	3300009137	Grasslands Soil	AALRIARTAPINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAYASTFGAQVVFAAVVLGGYLMIAVRSA*
Ga0066709_1035111433	3300009137	Grasslands Soil	AALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLAAAWPTLRAVYSGHVHASTFGAQVAFAAVVLGGYLMIAVRSV*
Ga0105241_103744773	3300009174	Corn Rhizosphere	ELPGALWPVLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0105242_113270701	3300009176	Miscanthus Rhizosphere	AAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0105237_100627944	3300009545	Corn Rhizosphere	DAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0105238_121758391	3300009551	Corn Rhizosphere	TAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0134109_104676311	3300010320	Grasslands Soil	GPGVATAALRIARTAPINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAYASTFGAQVVFAAVVLGGYLMIAVRSA*
Ga0134125_105747221	3300010371	Terrestrial Soil	VLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMIAVRAV*
Ga0134125_119945381	3300010371	Terrestrial Soil	AGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVADWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0134128_104432074	3300010373	Terrestrial Soil	GALWPVLGLAAGPGVAAAAVRIARTAPINPADQGPDVPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGQVHASTFGAQVVFATVVLGGYLMIAVRPV*
Ga0134127_102823802	3300010399	Terrestrial Soil	AAGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0134122_102409692	3300010400	Terrestrial Soil	QGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV*
Ga0137376_101024913	3300012208	Vadose Zone Soil	NPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAYASTFGAQVVFAAVVLGGYLMIAVRSA*
Ga0137371_101253721	3300012356	Vadose Zone Soil	ARTAPVNPADQGPDTPVTAPPWLMTRAGSVLLGVAGAWPTLRAVYAGHVHASTFGAQVAVAVVVLGGYLMLAVRSGGAAS*
Ga0137375_106728252	3300012360	Vadose Zone Soil	GEIAVRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQLAVAAVVLGGYLMIAVRSA*
Ga0157322_10090761	3300012490	Arabidopsis Rhizosphere	VRVARTAPVNPADQGPDAPVTAPPWLMTRAGSVLLGVVAAWPTLRAVYAGHVHASTFGAQVAVAAVVLGGYLMIAVRSA*
Ga0137397_111039491	3300012685	Vadose Zone Soil	VNPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGQVHASTFGAQVVFAAVVLGGYLMIAVRSV*
Ga0137404_107924831	3300012929	Vadose Zone Soil	RTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0157377_108392192	3300014745	Miscanthus Rhizosphere	LWPVLGLAAGPGVAAAPLRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0157377_108889651	3300014745	Miscanthus Rhizosphere	APVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0157379_103355094	3300014968	Switchgrass Rhizosphere	APPWLLTRAGSALLGLVAAWPTLRAVYTGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0137418_107657241	3300015241	Vadose Zone Soil	MDFVVGVPTAPPWLLTRAGSVLLGLAATWPTLRAVYAGQVHASTFGAQVVFAAVVLGGYLMIAVRSV*
Ga0182007_101628052	3300015262	Rhizosphere	GPGVAAAALRIARTAPINPADQGPDVPVTAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHASTFGAQLAFAAVVLGGYLMIAVRSA*
Ga0137403_106264452	3300015264	Vadose Zone Soil	PVLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV*
Ga0132256_1031417261	3300015372	Arabidopsis Rhizosphere	TAPINPADQGPDAPVTAPPWLLTRAGSALLGVAAAWPTLRAVYAGHVHASTFGAQVVAAAVVLGGYLMLADRSA*
Ga0132257_1023972492	3300015373	Arabidopsis Rhizosphere	PVTAPPWLLTRAGSLLLGLIAAWPTLRAVYAGHVHASTFGAQVVVAAVVLAGYLMLAVRSV*
Ga0187785_102410623	3300017947	Tropical Peatland	DQGPDAAVTAPPWLLTRAGSVLLGVVAAGPTLRAVYAGHVHVSTFGAQVAVSAVVLGGYLMLAVRSA
Ga0187766_101135792	3300018058	Tropical Peatland	PADQGPDTPVGNAPPWLMTRAGSVLLGLAGAYPALRAVLAGHVHGGTLAAQLAVSAAVLGGYLVLAVRAA
Ga0206354_109539222	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LAAGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLAVRSA
Ga0210399_103258121	3300020581	Soil	NPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHAHASTLGAQVAFAAVVLGGYLMIAVRSV
Ga0210401_112486602	3300020583	Soil	DQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHVSTFGAQVAFAAVVLGGYLMIAVRSV
Ga0210397_101390231	3300021403	Soil	LALLALTGELPGALWPVLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGTQVVVAGVVLGGYLMLAVRSV
Ga0210397_103399551	3300021403	Soil	VPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHVSTFGAQVAFAAVVLGGYLMIAVRSV
Ga0210387_114887322	3300021405	Soil	APPWLLTRAGSILLGLAAAWPTLRAVYAGHAHASTLGAQVAFAAVVLGGYLMIAVRSV
Ga0210410_111463941	3300021479	Soil	APINPADQGPDAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRSA
Ga0247660_10930581	3300024317	Soil	AAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207692_106896551	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVVAAAVVLGGYLMLAVRSV
Ga0207699_100170194	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ALWPVLGLAAGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0207699_114425602	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	APVNPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0207671_103301202	3300025914	Corn Rhizosphere	AAAAVRVARTAPVNPAAQGPDAPVTAPPWLLTRAGSLLLGLAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0207693_100480063	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0207693_106036011	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ADQGPDAPVTAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHAHASTFGAQVVFAAVVLGGYLMIAVRSA
Ga0207693_106674211	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGVVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207649_104249912	3300025920	Corn Rhizosphere	AAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207700_108506581	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PGTAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYSGQVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0207700_119939441	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LALALALLALTGELPGALWPLLGLAAGPGTAAAALRIARTAPVNPADQGLDAPVTAPPWLLTRAGSLLLGLIATWPTLRAVYAGQVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0207664_103491471	3300025929	Agricultural Soil	DAPVMAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMLAVRSA
Ga0207664_106416321	3300025929	Agricultural Soil	AAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207665_101033155	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LRIARTAPVNPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0207665_102018511	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLIAAWPTLRAVYAGHVHASTFGAQVVVAAVVLAGYLMLAVRSV
Ga0207667_117628112	3300025949	Corn Rhizosphere	APVTAPPWLLTRAGSALLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207651_117930222	3300025960	Switchgrass Rhizosphere	INPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0207641_114632101	3300026088	Switchgrass Rhizosphere	LRIARTAPVNPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0207674_107733792	3300026116	Corn Rhizosphere	AGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0207698_122925752	3300026142	Corn Rhizosphere	LTGELHGALWPVLGLAAGPGVAAAAVRVARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGVAGAWPTLRAVYTGHVDASTFVAQVVVAAVVLGGYLMLTVRSV
Ga0307306_101632522	3300028782	Soil	LRIARTAPINPADQGPDAPLTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVAVAAVVLGGYLMLAVRSV
Ga0307305_101029491	3300028807	Soil	ADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHTSTFGAQVIFAAVVLGGYLMIAVRSA
Ga0307296_107286071	3300028819	Soil	NPADQGPDAPVTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRSA
Ga0307277_100737412	3300028881	Soil	VAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRGVYAGHVHASTVGAQVAVAAVVLGGYLMLAVRSV
Ga0307304_102820582	3300028885	Soil	VAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSVLLGLAAAWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRSV
Ga0307498_101589622	3300031170	Soil	VTAPPWLLTRAGSVLLGLVAAWPTLRAVYAGHVHASTFGAQVAVAAVVLGGYLMLAVRCV
Ga0307499_101276662	3300031184	Soil	LPGALWPVLGLAAGPGVAAAALRIARTAPINPADQGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYTGHVHASTFGAQVVVAAVVLGGYLMLAVRSV
Ga0318515_102234411	3300031572	Soil	GPDTPLTAPPWLMTRAGSVLLGAVGAWPTLRAVYAGHLNASTFGAQVAVAAVVLGGYLMLAVRSA
Ga0318494_104525681	3300031751	Soil	GPGVAAAALRIARTAPINPADQGPDTPLGPTPPWLITRAGSVSLGLAGASPTLRAVLAGQVHGSTFAAQLAVSAVVLGGYLMRAVRAAPSR
Ga0307470_116622591	3300032174	Hardwood Forest Soil	TAPINPADQGPDAPVTAPPWLLTRAGSVLLGLAATWPTLRAVYAGHVHASTFGAQVVFAAVVLGGYLMIAVRPV
Ga0335085_104078601	3300032770	Soil	VAAPPWLMTRAGSVLLGVAGAWPTLRAVYAGRVQASTFGAQVVVAAVVLGGYLMLAVRSGRP
Ga0335085_121341001	3300032770	Soil	VNPADQGPDTPVTALPWLMTRAGSVLLGAAGTWPTLRAVYAGHVDASTFGAQVAAAAVVLGGYLMLAVRSA
Ga0335079_109536552	3300032783	Soil	PGAAAAALRIARTAPVNPADQGPDTPLTAPPWLMTRAGSVLLGVAGAWPTLRAVYAGHVQASTFGAQVAVAAVVLGGYLMLAVRSV
Ga0335080_104940233	3300032828	Soil	ADQGPDTPLTAPPWLMTRAGSVLLGAAGAWPTLRAVYAGHVDASTFGVQVAVAAVVLGGYLMLAVRSA
Ga0335081_118616541	3300032892	Soil	DQGPDAAVTAPPWLLTRAGSVLLGVVAAWPTLRAVYAGHVHVSTFGAQVAVSAVVLGGYLMLAVRSAWG
Ga0335076_117587451	3300032955	Soil	PGGTVAAPPWLMTRAGSVLLGVAGAWPTLRAVYAGRVQASTFGAQVVVAAVVLGGYLMLAVRSGRP
Ga0373950_0009244_2_202	3300034818	Rhizosphere Soil	QGPDAPVTAPPWLLTRAGSLLLGLVAAWPTLRAVYAGHVHASTFGAQVVVAAVVLGGYLMLAVRSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences