Metagenome / Metatranscriptome Family F099655

Basic Information
Family ID	F099655
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	45 residues
Representative Sequence	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTVVDLDAAVSRY
Number of Associated Samples	95
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.66 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.23 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Bacteria (74.757 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.097 % of family members)
Environment Ontology (ENVO)	Unclassified (29.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.718 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.32% β-sheet: 0.00% Coil/Unstructured: 75.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00441	Acyl-CoA_dh_1	52.43
PF02771	Acyl-CoA_dh_N	13.59
PF01717	Meth_synt_2	11.65
PF02770	Acyl-CoA_dh_M	9.71
PF01575	MaoC_dehydratas	0.97
PF13561	adh_short_C2	0.97
PF07366	SnoaL	0.97
PF00753	Lactamase_B	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	75.73
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	11.65

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.76 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.92 %
Unclassified	root	N/A	25.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.97 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.88 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.97 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	3.88 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	0.97 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	3.88 %
Nitrosomonas supralitoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas supralitoralis	0.97 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.24 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	3.88 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	0.97 %
Nitrosomonas supralitoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas supralitoralis	0.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1027431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1059	Open in IMG/M
3300001661\|JGI12053J15887_10191244	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005174\|Ga0066680_10031008	All Organisms → cellular organisms → Bacteria → Proteobacteria	3024	Open in IMG/M
3300005329\|Ga0070683_101377194	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300005332\|Ga0066388_101763540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1099	Open in IMG/M
3300005332\|Ga0066388_105883843	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300005558\|Ga0066698_10381828	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300005615\|Ga0070702_101549922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300005713\|Ga0066905_101910887	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005764\|Ga0066903_103988033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	792	Open in IMG/M
3300005843\|Ga0068860_100525498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300006042\|Ga0075368_10584011	Not Available	505	Open in IMG/M
3300006175\|Ga0070712_100446918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1076	Open in IMG/M
3300006177\|Ga0075362_10466672	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300006755\|Ga0079222_12396310	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300006847\|Ga0075431_101277152	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300006881\|Ga0068865_102177723	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300009012\|Ga0066710_101548852	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009038\|Ga0099829_10374626	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009090\|Ga0099827_11400723	Not Available	608	Open in IMG/M
3300009137\|Ga0066709_104660894	Not Available	501	Open in IMG/M
3300009143\|Ga0099792_10413693	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300009148\|Ga0105243_10165431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1911	Open in IMG/M
3300009176\|Ga0105242_12360595	Not Available	579	Open in IMG/M
3300010047\|Ga0126382_11378857	Not Available	642	Open in IMG/M
3300010048\|Ga0126373_11598663	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010321\|Ga0134067_10479758	Not Available	512	Open in IMG/M
3300010373\|Ga0134128_10357100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1633	Open in IMG/M
3300010373\|Ga0134128_13050381	Not Available	515	Open in IMG/M
3300010398\|Ga0126383_11962098	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010399\|Ga0134127_13206848	Not Available	534	Open in IMG/M
3300012189\|Ga0137388_10444781	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300012357\|Ga0137384_10533029	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012363\|Ga0137390_10914992	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300012469\|Ga0150984_113498165	Not Available	597	Open in IMG/M
3300012582\|Ga0137358_10296231	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300012683\|Ga0137398_11209726	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012917\|Ga0137395_10015035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4356	Open in IMG/M
3300012957\|Ga0164303_10206374	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012976\|Ga0134076_10318189	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012989\|Ga0164305_10412960	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300014969\|Ga0157376_12206426	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300015200\|Ga0173480_10924762	Not Available	568	Open in IMG/M
3300015357\|Ga0134072_10072985	Not Available	1003	Open in IMG/M
3300015358\|Ga0134089_10253922	Not Available	719	Open in IMG/M
3300016371\|Ga0182034_12075929	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300016387\|Ga0182040_11164033	Not Available	648	Open in IMG/M
3300016404\|Ga0182037_11492946	Not Available	599	Open in IMG/M
3300018000\|Ga0184604_10214148	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300018074\|Ga0184640_10336798	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300018077\|Ga0184633_10279375	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300018082\|Ga0184639_10106227	Not Available	1484	Open in IMG/M
3300020581\|Ga0210399_11606311	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300021171\|Ga0210405_11252156	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300021560\|Ga0126371_10166793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2276	Open in IMG/M
3300022726\|Ga0242654_10231574	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300022883\|Ga0247786_1135411	Not Available	548	Open in IMG/M
3300025899\|Ga0207642_10547693	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300025905\|Ga0207685_10004089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3653	Open in IMG/M
3300025944\|Ga0207661_11245446	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300026498\|Ga0257156_1120723	Not Available	545	Open in IMG/M
3300027727\|Ga0209328_10043950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1372	Open in IMG/M
3300027862\|Ga0209701_10521167	Not Available	643	Open in IMG/M
3300027882\|Ga0209590_10727634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	634	Open in IMG/M
3300028710\|Ga0307322_10241589	Not Available	500	Open in IMG/M
3300028755\|Ga0307316_10246725	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300028771\|Ga0307320_10305817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas supralitoralis	632	Open in IMG/M
3300028793\|Ga0307299_10149936	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300028811\|Ga0307292_10128849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1011	Open in IMG/M
3300028819\|Ga0307296_10138172	Not Available	1313	Open in IMG/M
3300028819\|Ga0307296_10282327	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300028875\|Ga0307289_10045317	Not Available	1753	Open in IMG/M
3300029636\|Ga0222749_10347423	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300031545\|Ga0318541_10445002	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031564\|Ga0318573_10388652	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031573\|Ga0310915_10374382	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300031668\|Ga0318542_10159826	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031682\|Ga0318560_10383093	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031724\|Ga0318500_10077076	Not Available	1476	Open in IMG/M
3300031764\|Ga0318535_10456930	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300031768\|Ga0318509_10012763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3701	Open in IMG/M
3300031859\|Ga0318527_10402516	Not Available	584	Open in IMG/M
3300031860\|Ga0318495_10353653	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031880\|Ga0318544_10237770	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031880\|Ga0318544_10391284	Not Available	540	Open in IMG/M
3300031894\|Ga0318522_10283502	Not Available	628	Open in IMG/M
3300031896\|Ga0318551_10484322	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031910\|Ga0306923_10006243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11730	Open in IMG/M
3300031946\|Ga0310910_10370179	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300031959\|Ga0318530_10226777	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300032010\|Ga0318569_10253690	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300032052\|Ga0318506_10054795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1620	Open in IMG/M
3300032059\|Ga0318533_10775108	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300032059\|Ga0318533_10995667	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300032060\|Ga0318505_10348683	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300032060\|Ga0318505_10357530	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300032063\|Ga0318504_10413246	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300032065\|Ga0318513_10015773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3062	Open in IMG/M
3300032180\|Ga0307471_100618451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1243	Open in IMG/M
3300032180\|Ga0307471_104000601	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300033290\|Ga0318519_10022498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2849	Open in IMG/M
3300033290\|Ga0318519_10437802	Not Available	782	Open in IMG/M
3300033475\|Ga0310811_10942151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	769	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.29%
Host-Associated	Host-Associated	9.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.41%
Plants	Host-Associated → Plants	9.71%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.85%
Sediment	Environmental → Aquatic → Sediment	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Roots	Host-Associated → Plants → Roots	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.73%
Loam	Environmental → Terrestrial → Soil → Loam	10.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.94%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10274312	3300000655	Forest Soil	MSTTLVADIGGSKSRFAIANSSGALEHLLVIHNDTAADLDGAVARYLEETGA
JGI12053J15887_101912442	3300001661	Forest Soil	MSHSLLADIGGSKSRFALANSAGRPERILVVENDTVPDLEA
Ga0066680_100310081	3300005174	Soil	MGTSLLADIGGSKSRFALAKSAGPPERVLVIENDTVADLDAAVARYLEETGA
Ga0070683_1013771941	3300005329	Corn Rhizosphere	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTVVDLDAAVSRY
Ga0066388_1017635401	3300005332	Tropical Forest Soil	MSQSLLADIGGSKSRFALANAAGRPERILVIDNDEVAGFEGAVARYLDET
Ga0066388_1058838432	3300005332	Tropical Forest Soil	MAGSLLADIGGSKSRFALANSAGRPERISVIDNDAVPHLRAALARYLEET
Ga0066698_103818282	3300005558	Soil	MGTSLLADIGGSKSRFALANSAGPPERVLVIENDTVADLDAAVARYLEETGA
Ga0070702_1015499221	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDGAV
Ga0066905_1019108872	3300005713	Tropical Forest Soil	MRTSLLADIGGSKSRFALAKSAGPPERVLVIENDTV
Ga0066903_1039880332	3300005764	Tropical Forest Soil	MSGALLADIGGSKSRFALAGVAGWPERILIIDNDTVADLDAAVVRY
Ga0068860_1005254982	3300005843	Switchgrass Rhizosphere	MMSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDGA
Ga0075368_105840111	3300006042	Populus Endosphere	MTESLLADIGGSKSRFALANSAGRPERTLVIDNDTVADFD
Ga0070712_1004469182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLTLLADIGGTKSRFALANSAGRPERILIMDNDTVADLDGA
Ga0075362_104666722	3300006177	Populus Endosphere	MTESLLADIGGSKSRFALANSAGRPERIAVVDNDTVADLDAAVASYLD
Ga0079222_123963102	3300006755	Agricultural Soil	MSTTLVADIGGSKSRFAIANSSGALEHLLVIHNDTAADLDAAVSRYLEE
Ga0075431_1012771521	3300006847	Populus Rhizosphere	VPVSATLLADIGGSKSRFALTSSAGRPERILVIENDTAASLE
Ga0068865_1021777231	3300006881	Miscanthus Rhizosphere	MSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDG
Ga0066710_1015488522	3300009012	Grasslands Soil	MGTTLLADIGGSKSRFALANSAGPPERMSVIENDTVAD
Ga0099829_103746263	3300009038	Vadose Zone Soil	MSAALVADIGGSKSRFGLANSAGWPQRILVIENDTVADLETAVARYLKE
Ga0099827_114007231	3300009090	Vadose Zone Soil	MGTSLLADIGGSKSRFALANSAGPPERVLVIENDTVADLDAAVARYLEETGARP
Ga0066709_1046608942	3300009137	Grasslands Soil	MSAALVADIGGSKSRFGLANSAGWPERIVVIENDSVP
Ga0099792_104136932	3300009143	Vadose Zone Soil	LSVMVQALLADIGGSNSRFAVCEPGGRPERVMVVD
Ga0105243_101654311	3300009148	Miscanthus Rhizosphere	MMSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDGAVSRYL
Ga0105242_123605952	3300009176	Miscanthus Rhizosphere	MMSLTLLADIGGSKSRFALANSVGRPERILIMDNDTVADLDGAISRYLD
Ga0126382_113788572	3300010047	Tropical Forest Soil	MRTSLLADIGGSKSRFALAKSAGPPERVLVIENDTVADLDAAVARYLEETGARPRAA
Ga0126373_115986632	3300010048	Tropical Forest Soil	MRTSLLADIGGRKSRFALAKSAGPPERVLVIENDTVADLDAAVARYLEE
Ga0134067_104797581	3300010321	Grasslands Soil	MSTTLVADIGGSKSRFAIANSSGALEHLLVIHNDTAADLDAAVSRYLE
Ga0134128_103571001	3300010373	Terrestrial Soil	MSTTLLADIGGSKGRFAIANSSGAVEHVLVIHNDTAADLDAAVS
Ga0134128_130503811	3300010373	Terrestrial Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMDNDT
Ga0126383_119620982	3300010398	Tropical Forest Soil	MSTTMSTTLLGDIGGSKSRFALANSTGAIERMLVMEN
Ga0134127_132068482	3300010399	Terrestrial Soil	MSLTLLADIGGTKSRFALANSAGRPERILIMDNDTVADLDG
Ga0137388_104447811	3300012189	Vadose Zone Soil	MSAALVADIGGSKSRFGLANSAGWPQRILVIENDTVADLETAVARYLKETG
Ga0137384_105330292	3300012357	Vadose Zone Soil	MGTTLLADIGGSKSRFALANSAGPPERMSVIENDTVADLDAAVARYLEETGAHP
Ga0137390_109149921	3300012363	Vadose Zone Soil	MSHILLGDIGGSKSRFALANSAGRPERILVVDNDT
Ga0150984_1134981652	3300012469	Avena Fatua Rhizosphere	MMSQTLLADIGGSKSRFALANSAGRPERILIMDNDTVADL
Ga0137358_102962312	3300012582	Vadose Zone Soil	MGTSLLADIGGSKSRFALANSAGAPERMLVIENDTVADLDAAVARYLEETGA
Ga0137398_112097261	3300012683	Vadose Zone Soil	MSHTLVGDIGGSKSRFALANSAGRPERILVIDNDTATDLE
Ga0137395_100150355	3300012917	Vadose Zone Soil	MVIVGVAVMSTTLLADIGGSKSRFALGDSSGALERVVVIHNDTV
Ga0164303_102063742	3300012957	Soil	MSLTLLADIGGSKSRFALANAAGRPERILVIENDTVVDLDAAVSRYLD
Ga0134076_103181892	3300012976	Grasslands Soil	MSAILLADIGGSNSRFALANSAGRPERIEVMDNDT
Ga0164305_104129601	3300012989	Soil	MSTTLLADIGGSKSRFAIANSSGAVEHVLVIHNDT
Ga0157376_122064261	3300014969	Miscanthus Rhizosphere	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTV
Ga0173480_109247622	3300015200	Soil	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTVVDLDAAVSRYLDETGA
Ga0134072_100729852	3300015357	Grasslands Soil	MSTTLVADIGGSKSRFALSNSSGELERVLVIDNDTVAGLDAAVAYYLEET
Ga0134089_102539221	3300015358	Grasslands Soil	MRTTLLADIGGSKSRFALASSAGTPARMSVIENDTVA
Ga0182034_120759292	3300016371	Soil	MSVLLADIGGSKSRFALTAASGVTPAVVIDNDTVAGFEGAIARFLDA
Ga0182040_111640331	3300016387	Soil	MGAALVADIGGSKSRFALASSAVWPEHIRVIENDGVSDLESAVARYLA
Ga0182037_114929461	3300016404	Soil	MRTSLLADIGGSKSRFALAKSAGPPERVLVIENDTVADLDAAVARYLEETGARP
Ga0184604_102141481	3300018000	Groundwater Sediment	MMSLTLLADIGGTKSRFALANSSGRPERILIMDNDTVADLDGAV
Ga0184640_103367982	3300018074	Groundwater Sediment	MMSLTLLADIGGSKSRFALASSAGRPERILIMENYTVADLDAAVCRYLD
Ga0184633_102793751	3300018077	Groundwater Sediment	MMSLTLLADIGGSKSRFALASSAGRPERILIMENYTVADLD
Ga0184639_101062272	3300018082	Groundwater Sediment	MMSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADL
Ga0210399_116063111	3300020581	Soil	MSAALLADVGGSKTRLALANATGPPGRILVIENDTVADLETAVTRYLEHTGEHPEAAIF
Ga0210405_112521561	3300021171	Soil	MSAALLADVGGSKTRLALANSTGPPGRILVIENDTVADLETAV
Ga0126371_101667933	3300021560	Tropical Forest Soil	MSTTLVADIGGSKSRFALSNSSGAFERMLVIDNDTVAGLDAAVARYLE
Ga0242654_102315742	3300022726	Soil	MSAALLADVGGSKTRLALANSTGPPGRILVIENDTVADLETAVTQYLEHTGEHP
Ga0247786_11354111	3300022883	Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMQNDTVADLEAAVHRYLD
Ga0207642_105476932	3300025899	Miscanthus Rhizosphere	MMSLTLLADIGGSKSRFALANSAGRPERILIMDND
Ga0207685_100040891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSTTLLADIGGSKSRFAIANSSGAVEHVLVIHNDTAA
Ga0207661_112454461	3300025944	Corn Rhizosphere	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTVVDLDAAVSRYLD
Ga0257156_11207231	3300026498	Soil	MSTTLLADIGGSKSRFALGNPSGALERVVLIHNDTVAGLDA
Ga0209328_100439502	3300027727	Forest Soil	MSALVADIGGSKSRFALANSAGWPEHILIIENDTVPDLEAA
Ga0209701_105211671	3300027862	Vadose Zone Soil	MSAALVAEIGGSKSRFGLANSAGWPQRILVIENDTVADLETAVARYLKETG
Ga0209590_107276341	3300027882	Vadose Zone Soil	MGTSLLADIGGSKSRFALAHSAGPPERVLVIENDTVADLDAAVARYLEETGARP
Ga0307322_102415892	3300028710	Soil	MSTTLLADIGGSKSRFAIANSSGAVEHVLVIHNDTAAD
Ga0307316_102467251	3300028755	Soil	MMSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDGAVSRYLDET
Ga0307320_103058172	3300028771	Soil	MSQTLLADIGGSKSRFALANSAGGPERILVIENDTAVDL
Ga0307299_101499361	3300028793	Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMENDTVADL
Ga0307292_101288492	3300028811	Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMENDTV
Ga0307296_101381721	3300028819	Soil	MVIDRVNMMSLTLLADIGGSKSRFALANSAGRPERILIMDNDT
Ga0307296_102823272	3300028819	Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMDNDTVADLDAAVCRYLDETGA
Ga0307289_100453172	3300028875	Soil	MSLTLLADIGGSKSRFALANSAGRPERILIMENDTVADLDAAVCRYL
Ga0222749_103474232	3300029636	Soil	MSAALLADVGGSKTRLALANSTGPPGRILVIENDTVADLETAVTQYLEHTGEHPE
Ga0318541_104450022	3300031545	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTRYLEETGAR
Ga0318573_103886521	3300031564	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTCYLEETGARP
Ga0310915_103743821	3300031573	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTRYLEET
Ga0318542_101598261	3300031668	Soil	MRTCLLADIGGSKSRFALAKSAGAPERVLVIENDTVAD
Ga0318560_103830931	3300031682	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTRYLEETGARPRAA
Ga0318500_100770762	3300031724	Soil	MRTSLLADIGGSKSRFALAKSAGAPERVLVIENDTVADLDAAVARYLEET
Ga0318535_104569302	3300031764	Soil	MSALVADIGGSKSRFALANSAGWPEHILIIENDTVPNLEGAVA
Ga0318509_100127635	3300031768	Soil	MRTSLLADIGGSKSRFALAKSAGAPERVLVIENDTVADLDAAVARYLEGTGAR
Ga0318527_104025162	3300031859	Soil	MRTSLLADIGGSKSRFALAKSAGLPERVLVIENDTVAGLDAAVARRSPRGSARP
Ga0318495_103536532	3300031860	Soil	MSTTLLGDIGGSKSRFALANSFGAIERMLVMENDTAADLDAAVARYLE
Ga0318544_102377701	3300031880	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTCY
Ga0318544_103912841	3300031880	Soil	MSTTLLGDIGGSKSRFALANSFGAIERMLVMENDTAADLDAAVARYLEE
Ga0318522_102835021	3300031894	Soil	MGAALVADIGGSKSRFALASSAVWPEHIRVIENDGVSDLESAVARYLAE
Ga0318551_104843221	3300031896	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTRYLEETG
Ga0306923_100062431	3300031910	Soil	MSTTLLGDIGGSKSRFALANSFGAIERMLVMENDTAAD
Ga0310910_103701791	3300031946	Soil	MRTSLLADIGGSKSRFALASSAGAPKRVSVIENDTVADL
Ga0318530_102267771	3300031959	Soil	MRTSLLADIGGSKSRFALASSAGAPKRVSVIENDTVADLDAAVA
Ga0318569_102536902	3300032010	Soil	MRTCLLADIGGSKSRFALAKSAGAPERVLVIENDTVADLDAAVAR
Ga0318506_100547951	3300032052	Soil	MSTTLLGDIGGSKSRFALANSFGAIERMLVMENDTAADLDAAVARYLEETGAH
Ga0318533_107751081	3300032059	Soil	MSALVADIGGSKSRFALANSEGWPERILIIENDTVPDLEGAVVRYLE
Ga0318533_109956671	3300032059	Soil	MSVLLADIGGSKSRFALTAASGVTPAVVIDNDTVAGFEGAIARFLDASAAR
Ga0318505_103486832	3300032060	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTRYLE
Ga0318505_103575301	3300032060	Soil	MSALVADIGGSKSRFALANSEGWPERILIIENDTVPDLEGAVVRYLDE
Ga0318504_104132461	3300032063	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDT
Ga0318513_100157734	3300032065	Soil	MRTSLLADIGGSKSRFALAKSAGAPERVLVIENDTVADLDA
Ga0307471_1006184511	3300032180	Hardwood Forest Soil	MGTSLLADIGGSKSRFALAHSAGAPKRVLVIENDTVADLDAAVARYLEET
Ga0307471_1040006011	3300032180	Hardwood Forest Soil	MSQTLLADIGGSKSRYALANAAGRPERILVIENDTVA
Ga0318519_100224981	3300033290	Soil	MRTTLVADIGGSKSRFALAHSAGAVERVLVIENDTVADLDAAVTCYLE
Ga0318519_104378021	3300033290	Soil	MVTALVADIGGSKSRFALASSAVWPEHIRVIENDGVSDLESAVARY
Ga0310811_109421511	3300033475	Soil	MSLTLLADIGGSKSRFALANSAGRPERILVIENDTVVDLD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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