NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F099375

Metagenome Family F099375

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099375
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 107 residues
Representative Sequence ASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Number of Associated Samples 89
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 50.49 %
% of genes from short scaffolds (< 2000 bps) 74.76 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.019 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(11.650 % of family members)
Environment Ontology (ENVO) Unclassified
(51.456 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(75.728 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.
1JGI24752J21851_10362301
2JGI24743J22301_100867011
3JGI24748J21848_10469751
4JGI24036J26619_100219441
5Ga0063356_1005281363
6Ga0065696_14504251
7Ga0065712_101398871
8Ga0070658_100369694
9Ga0070658_104506461
10Ga0070676_104297732
11Ga0070676_108946541
12Ga0070683_1000622951
13Ga0070683_1001919932
14Ga0070683_1021827182
15Ga0070670_1017009351
16Ga0070677_101230852
17Ga0070666_113732991
18Ga0070682_1014477222
19Ga0068868_1006334142
20Ga0068868_1013527772
21Ga0070689_1000032272
22Ga0070668_1009298921
23Ga0070675_1000248131
24Ga0070671_1001454812
25Ga0070688_1015302462
26Ga0070659_1000455673
27Ga0070667_1012940011
28Ga0070705_1010749071
29Ga0070694_1014844471
30Ga0070662_1014698992
31Ga0070665_1001049951
32Ga0070665_1007774861
33Ga0068855_1007590752
34Ga0070664_1000450844
35Ga0070664_1014876852
36Ga0068852_1003637892
37Ga0068871_1006885152
38Ga0079222_100306093
39Ga0075435_1009625461
40Ga0111539_100456184
41Ga0105245_117220731
42Ga0105245_118169512
43Ga0111538_101002882
44Ga0105238_111275092
45Ga0134122_100693493
46Ga0150985_1048241821
47Ga0150985_1189951342
48Ga0157345_10364231
49Ga0157301_100608132
50Ga0157306_101208232
51Ga0164300_100260593
52Ga0164298_103270432
53Ga0164303_100874723
54Ga0164301_118730942
55Ga0164307_106026272
56Ga0164307_110026341
57Ga0163162_107382842
58Ga0157372_100609876
59Ga0157372_121606942
60Ga0163163_100799953
61Ga0182008_101898952
62Ga0157377_110190042
63Ga0132255_1001084541
64Ga0190274_103420692
65Ga0207672_10066681
66Ga0207673_10007693
67Ga0207697_1000015218
68Ga0207656_100165552
69Ga0207642_101313942
70Ga0207705_100882881
71Ga0207705_113928451
72Ga0207671_103172741
73Ga0207652_117939431
74Ga0207694_110902831
75Ga0207650_100263794
76Ga0207659_100203923
77Ga0207659_118375651
78Ga0207690_101129493
79Ga0207711_114663752
80Ga0207679_111378662
81Ga0207640_114773031
82Ga0207703_123207111
83Ga0207678_103169221
84Ga0207678_117224201
85Ga0207702_101426073
86Ga0207641_111156402
87Ga0207674_1000171419
88Ga0209074_100236352
89Ga0268266_119005611
90Ga0247828_100679022
91Ga0247825_105690182
92Ga0307496_101289722
93Ga0307497_101835901
94Ga0310907_105349681
95Ga0308176_127452031
96Ga0310902_100938483
97Ga0310906_110668011
98Ga0310899_105530602
99Ga0310890_100787472
100Ga0310895_102619482
101Ga0310889_100090601
102Ga0310810_100598203
103Ga0247829_114960172
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.83%    β-sheet: 0.00%    Coil/Unstructured: 47.17%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100ASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPKSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
34.0%66.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Terrestrial Soil
Agricultural Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere Bulk Soil
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
11.7%10.7%4.9%5.8%2.9%5.8%2.9%2.9%8.7%5.8%11.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24752J21851_103623013300001976Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGN
JGI24743J22301_1008670113300001991Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFA
JGI24748J21848_104697513300002074Corn, Switchgrass And Miscanthus RhizosphereVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
JGI24036J26619_1002194413300002128Corn, Switchgrass And Miscanthus RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFAD
Ga0063356_10052813633300004463Arabidopsis Thaliana RhizosphereMSAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRVLALTPHEVHDLAVAGRLSAMLPPDPPGSAAPVRFADIPGWREPK*
Ga0065696_145042513300005280Switchgrass Rhizosphere Bulk SoilMRRSRWTLRVASITFDNAMAAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAA
Ga0065712_1013988713300005290Miscanthus RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIA
Ga0070658_1003696943300005327Corn RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDAPGAAEPIRFADLAGWRDPK*
Ga0070658_1045064613300005327Corn RhizosphereTSISMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0070676_1042977323300005328Miscanthus RhizosphereQASAAATTAATSISMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070676_1089465413300005328Miscanthus RhizosphereTSISMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDAPGAAEPIRFADLAGWRDPK
Ga0070683_10006229513300005329Corn RhizosphereQHAALTPGSGDDLGERLAALAADLFSADAATCAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070683_10019199323300005329Corn RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0070683_10218271823300005329Corn RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLAGMLPPDAPGVAEAIRFADLTGWRDPK*
Ga0070670_10170093513300005331Switchgrass RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070677_1012308523300005333Miscanthus RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAESIRFADLAGWRDPK*
Ga0070666_1137329913300005335Switchgrass RhizosphereRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0070682_10144772223300005337Corn RhizosphereTSISMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0068868_10063341423300005338Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0068868_10135277723300005338Miscanthus RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0070689_10000322723300005340Switchgrass RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070668_10092989213300005347Switchgrass RhizosphereQASAAATTAATSISMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070675_10002481313300005354Miscanthus RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070671_10014548123300005355Switchgrass RhizosphereMAAVTHLRNQHAALTPMPGDDLGERLATLAAELFSAAAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGLLGSLLPPDPPASSGAPVRFDDITVWRQS*
Ga0070688_10153024623300005365Switchgrass RhizosphereITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0070659_10004556733300005366Corn RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAESIRFADLAGWRDPK*
Ga0070667_10129400113300005367Switchgrass RhizosphereMAAITHLRNQHAALTPMAGDDLGERLAALAAALFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSGAVRFDDIARWRP*
Ga0070705_10107490713300005440Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAAPVRFADIAGWREPK
Ga0070694_10148444713300005444Corn, Switchgrass And Miscanthus RhizosphereTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070662_10146989923300005457Corn RhizosphereFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070665_10010499513300005548Switchgrass RhizosphereRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070665_10077748613300005548Switchgrass RhizosphereRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0068855_10075907523300005563Corn RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0070664_10004508443300005564Corn RhizosphereMAAIAHLRNQHAALTPMPGDDLGERLAALAAQLFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSEAVRFDDIPGWRRR*
Ga0070664_10148768523300005564Corn RhizosphereAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLAGMLPPDAPGVAEAIRFADLTGWRDPK*
Ga0068852_10036378923300005616Corn RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRTVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0068871_10068851523300006358Miscanthus RhizosphereMAAVTHLRNQHAALTPMPGDDLGERLATLAAELFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGSLLPPDPPASSGAPVRFDDITVWRQS*
Ga0079222_1003060933300006755Agricultural SoilMRRSRWTLRDGSITFDNAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATLAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0075435_10096254613300007076Populus RhizosphereMRCSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIA
Ga0111539_1004561843300009094Populus RhizosphereMTAITHVRNQHAALTPGSGDDLGGRLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0105245_1172207313300009098Miscanthus RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRTVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDLVALGTLRAFSWQLGATALAAL
Ga0105245_1181695123300009098Miscanthus RhizosphereWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0111538_1010028823300009156Populus RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAGTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0105238_1112750923300009551Corn RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRTVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0134122_1006934933300010400Terrestrial SoilMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAAMHAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0150985_10482418213300012212Avena Fatua RhizosphereMAAVTHLRNQHAALTPMPGDDLGERLAALAAELFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGSLLPPDPPAGSGAPLRFDDIAVWRQS*
Ga0150985_11899513423300012212Avena Fatua RhizosphereMAAITHLRNQHAALTPMPGDDLGERLAALAAELFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGSVLPPDPPAGSSGPVRFDDIAGWRAS*
Ga0157345_103642313300012498Arabidopsis RhizosphereMTAITHVRNQHAALTPGFGDDLGERLAALAADLFSADAGTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0157301_1006081323300012911SoilMTAITHVRNQHPALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0157306_1012082323300012912SoilASKVASGCTQREVGGTLRRTAISITDTGTSGSRRYQAACGQASAAATTAATSISMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0164300_1002605933300012951SoilMSAITQVRNQHAAFTPGSVDDLGDRLAALAADLFSADAATRTVERAFLERLLRILALTPHDVHDLAVAGRLAGMLPPDAPGDATPVRFADIGGWREPK*
Ga0164298_1032704323300012955SoilMAAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLSGMLPPDPAGNATPVRFSDIPGWREPK*
Ga0164303_1008747233300012957SoilMTAITHVRNQHAALTPGSGDDLGGRRAVQKTDLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAAPVRFADIAGWREPK*
Ga0164301_1187309423300012960SoilMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWRE
Ga0164307_1060262723300012987SoilMAAITHLRNQHAVLTPMPGDDLGERLVALAAELFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAASSGPVRFDDIAGWRRP*
Ga0164307_1100263413300012987SoilMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREP
Ga0163162_1073828423300013306Switchgrass RhizosphereMAAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0157372_1006098763300013307Corn RhizosphereHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK*
Ga0157372_1216069423300013307Corn RhizosphereASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0163163_1007999533300014325Switchgrass RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK*
Ga0182008_1018989523300014497RhizosphereMAAITHLRNQHAALTPMPGDELGDRLATLAADLFSADAATRAVERAFLARLLRVLSLTPHEIHDLAVAGRLGGVLPPDPSPGSSGPVRFDDIAGWRR*
Ga0157377_1101900423300014745Miscanthus RhizosphereRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTTHEVHDLAVAGRLTGMLPPDAPGAAEPIRFADLAGWRDPK*
Ga0132255_10010845413300015374Arabidopsis RhizosphereMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAAPVRFADIAGWREPK*
Ga0190274_1034206923300018476SoilMRHSRWTLRVASITFDNAMAAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAAMHAVERAFLERLLRILALTPHEVHDLAVAGRLAGVLPPDAPGNATPVRFADIAGWREPK
Ga0207672_100666813300025223Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVR
Ga0207673_100076933300025290Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADTATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207697_10000152183300025315Corn, Switchgrass And Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207656_1001655523300025321Corn RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0207642_1013139423300025899Miscanthus RhizosphereCEQASAGATTAATSISMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207705_1008828813300025909Corn RhizosphereTDTGISGWHRCPADCAPASEGATTVGTSISMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDAPGAAEPIRFADLAGWRDPK
Ga0207705_1139284513300025909Corn RhizosphereSITFDNAMTAITQVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207671_1031727413300025914Corn RhizosphereMAAIAHLRNQHAALTPMPGDDLGERLAALAAQLFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSEAVRFDDIPGWRRR
Ga0207652_1179394313300025921Corn RhizosphereTSGWHRCPADCAPASEGATTVGTSISMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0207694_1109028313300025924Corn RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRTVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0207650_1002637943300025925Switchgrass RhizosphereMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLAGMLPPDAPGVAEAIRFADLTGWRDPK
Ga0207659_1002039233300025926Miscanthus RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207659_1183756513300025926Miscanthus RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDAPGAAEP
Ga0207690_1011294933300025932Corn RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAESIRFADLAGWRDPK
Ga0207711_1146637523300025941Switchgrass RhizosphereMAAITHLRNQHAALTPMAGDDLGERLAALAAALFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSGAVRFDDIA
Ga0207679_1113786623300025945Corn RhizosphereMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAESIRFADL
Ga0207640_1147730313300025981Corn RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWR
Ga0207703_1232071113300026035Switchgrass RhizosphereISIRRSRWTLRTASITFANAMAAITHLRNQHAALTPMAGDDLGERLAALAAALFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSGAVRFDDIARWRP
Ga0207678_1031692213300026067Corn RhizosphereRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0207678_1172242013300026067Corn RhizosphereSIPRWRWTLRTASITFDNVMAAITHLRNQHAALTPMPGDDLGERLAALAAQLFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSEAVRFDDIPGWRRR
Ga0207702_1014260733300026078Corn RhizosphereMAAIAHLRNQHAALTPTPGDDLGERLAALAAQLFSADAATRAVERAFLDRLLRMLSLTPHEIHDLAVAGRLGDLLPPDPPAGSSEAVRFDDIPGWRRR
Ga0207641_1111564023300026088Switchgrass RhizosphereSMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0207674_10001714193300026116Corn RhizosphereMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSVDATTRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0209074_1002363523300027787Agricultural SoilMRRSRWTLRDGSITFDNAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATLAVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0268266_1190056113300028379Switchgrass RhizosphereRCPADCAPASEGATTVGTSISMRRSRWTLRDGSITFVDAMAAITHVRNQHAVLTPESGDDLGERLAALAADLFSADAATRTVERAFLDRLLRILALTPHEVHDLAVAGRLTGMLPPDTPGAAEPIRFADLAGWRDPK
Ga0247828_1006790223300028587SoilMTAITHVRNQHAALTPGSGDDLGGRLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0247825_1056901823300028812SoilMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDTPG
Ga0307496_1012897223300031200SoilNQHAALTPGSGDDLGERLAVLAADLFSADSATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0307497_1018359013300031226SoilHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0310907_1053496813300031847SoilMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAT
Ga0308176_1274520313300031996SoilMAAITHLRNQHAALTPVAGDDLGERLAALAADLFSADAATRAVERAFLDRLLRILTLTPHEIHDLAVAGRLTSVLPSDPPAAGAPV
Ga0310902_1009384833300032012SoilMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAAPVRFADIAGWREPK
Ga0310906_1106680113300032013SoilSMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALPPHEVHDLAVTGRLAGMLPPDAPGSATPVRFADIAGWREPK
Ga0310899_1055306023300032017SoilMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGGRLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNAAPVRFADIAGWREPK
Ga0310890_1007874723300032075SoilMRRSRWTLRVASITFDNAMTAITHVRNQHPALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0310895_1026194823300032122SoilTFDNAMTAITHVRNQHPALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0310889_1000906013300032179SoilFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIAGWREPK
Ga0310810_1005982033300033412SoilMSAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRVLALTPHEVHDLAVAGRLSAMLPPDPPGSAAPVRFADIPGWREPK
Ga0247829_1149601723300033550SoilMRRSRWTLRVASITFDNAMTAITHVRNQHAALTPGSGDDLGERLAALAADLFSADAATRAVERAFLERLLRILALTPHEVHDLAVAGRLAGMLPPDAPGNATPVRFADIVGW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.