Metagenome / Metatranscriptome Family F099328

Basic Information
Family ID	F099328
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	41 residues
Representative Sequence	RIIQAGTADACFVFFNRRIFLGEDLRAAIVVQARRALFK
Number of Associated Samples	91
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	6.80 %
% of genes from short scaffolds (< 2000 bps)	2.91 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (93.204 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine (15.534 % of family members)
Environment Ontology (ENVO)	Unclassified (63.107 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (62.136 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1GB_4MN_00534160 2SI54feb11_120mDRAFT_100002624 3JGI24925J35515_10027223 4JGI26060J43896_100532061 5JGI26061J44794_10582061 6JGI26244J51143_10375383 7JGI26239J51126_10120931 8JGI26243J51142_10065906 9JGI26243J51142_10635402 10Ga0055439_102384621 11Ga0068996_101570531 12Ga0066644_101065571 13Ga0074476_10897632 14Ga0066375_100899993 15Ga0081601_12535492 16Ga0082250_100029002 17Ga0082251_100416054 18Ga0105011_10355144 19Ga0105012_10486844 20Ga0105012_11861011 21Ga0102904_10278773 22Ga0105351_11866922 23Ga0115660_11857561 24Ga0102887_11041011 25Ga0117915_10722781 26Ga0117928_10946413 27Ga0117756_10993061 28Ga0114997_103725942 29Ga0115007_101564761 30Ga0114932_108048041 31Ga0115568_104502261 32Ga0115002_106277382 33Ga0114999_113101832 34Ga0118733_1044296762 35Ga0139247_10211261 36Ga0139246_11237841 37Ga0134293_10103951 38Ga0211694_103123761 39Ga0206686_10000237 40Ga0206684_12388492 41Ga0206678_102577891 42Ga0206683_103338102 43Ga0224503_103268971 44Ga0224498_100125691 45Ga0224513_100049091 46Ga0224506_100793301 47Ga0224508_101458471 48Ga0224508_108528832 49Ga0233429_10160655 50Ga0233430_11740453 51Ga0233431_11371083 52Ga0233431_12949631 53Ga0233435_10348224 54Ga0233435_10879091 55Ga0233442_10201374 56Ga0233442_10526001 57Ga0233441_11440161 58Ga0233439_100963543 59Ga0233434_10539024 60Ga0255056_102327893 61Ga0255056_105533261 62Ga0210019_10586541 63Ga0209449_10845091 64Ga0209685_10228733 65Ga0209142_10459363 66Ga0209658_10172484 67Ga0209041_10181514 68Ga0209054_10125381 69Ga0209664_11170111 70Ga0209494_11607332 71Ga0209044_10036641 72Ga0209305_10072866 73Ga0209047_10258641 74Ga0209558_10250481 75Ga0210124_11238831 76Ga0208308_10458242 77Ga0208950_11208162 78Ga0208971_11363651 79Ga0209302_102197903 80Ga0209090_105559421 81Ga0209035_101044613 82Ga0209501_100588301 83Ga0209272_102754651 84Ga0257123_10874973 85Ga0257123_11084731 86Ga0257117_10080315 87Ga0257121_12605551 88Ga0257115_11429021 89Ga0308010_10635693 90Ga0302137_12316161 91Ga0315332_105148462 92Ga0315326_109137602 93Ga0310120_102950433 94Ga0310120_103292471 95Ga0315318_101001544 96Ga0315278_120875562 97Ga0315315_111164872 98Ga0315315_115076111 99Ga0315333_100681411 100Ga0316202_100170671 101Ga0315334_107102333 102Ga0315334_111387721 103Ga0315334_112428681
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1GB_4MN_00534160 2JGI24925J35515_10027223 3JGI26060J43896_100532061 4Ga0055439_102384621 5Ga0066644_101065571 6Ga0082251_100416054 7Ga0105011_10355144 8Ga0114997_103725942 9Ga0139246_11237841
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38. 1Ga0117928_10946413 2JGI26060J43896_100532061 3JGI26244J51143_10375383 4Ga0068996_101570531 5Ga0074476_10897632 6Ga0066375_100899993 7Ga0082250_100029002 8Ga0082251_100416054 9Ga0105012_10486844 10Ga0115568_104502261 11Ga0115002_106277382 12Ga0206686_10000237 13Ga0206684_12388492 14Ga0224503_103268971 15Ga0224506_100793301 16Ga0233442_10201374 17Ga0233434_10539024 18Ga0255056_102327893 19Ga0209494_11607332 20Ga0209302_102197903 21Ga0315334_111387721
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00293	NUDIX	62.14
PF02965	Met_synt_B12	14.56
PF01198	Ribosomal_L31e	9.71
PF02219	MTHFR	6.80
PF02574	S-methyl_trans	1.94
PF13404	HTH_AsnC-type	0.97
PF02607	B12-binding_2	0.97
PF00589	Phage_integrase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	14.56
COG2097	Ribosomal protein L31E	Translation, ribosomal structure and biogenesis [J]	9.71
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	6.80
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	1.94
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	1.94

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	6.80 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	6.80 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.80 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	5.83 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5.83 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	5.83 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	5.83 %
Unclassified	root	N/A	93.20 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	5.83 %
Unclassified	root	N/A	93.20 %

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300024252\|Ga0233435_1034822	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2138	Open in IMG/M
3300003498\|JGI26239J51126_1012093	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2280	Open in IMG/M
3300007508\|Ga0105011_1035514	Not Available	2508	Open in IMG/M
3300007509\|Ga0105012_1048684	Not Available	2083	Open in IMG/M
3300007509\|Ga0105012_1186101	Not Available	681	Open in IMG/M
3300014973\|Ga0134293_1010395	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1391	Open in IMG/M
3300025623\|Ga0209041_1018151	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2646	Open in IMG/M
3300027844\|Ga0209501_10058830	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	2759	Open in IMG/M
3300028175\|Ga0257117_1008031	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	4208	Open in IMG/M
3300028706\|Ga0257115_1142902	All Organisms → cellular organisms → Archaea	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.91%
Marine	Environmental → Aquatic → Marine	96.12%
Sediment	Environmental → Aquatic → Sediment	0.97%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	9.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.94%
Gulf	Environmental → Aquatic → Marine → Gulf	1.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.85%
Inlet	Environmental → Aquatic → Marine → Inlet	15.53%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	31.07%
Lake	Environmental → Aquatic → Freshwater → Lake	0.97%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.53%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.94%
Sediment	Environmental → Aquatic → Marine → Sediment	5.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.91%

Habitat	Taxonomy	Distribution
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.97%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.91%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	2.91%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.91%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	28.16%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	15.53%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	13.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Gulf → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.97%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	0.97%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.94%
Hydrothermal Chimney Microbial Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Chimney Microbial Mat	1.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vents	0.97%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	15.53%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.65%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	5.83%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	4.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.97%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.97%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	0.97%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	1.94%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.94%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.97%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.91%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.94%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	12.62%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	10.68%
Seawater	Environmental → Aquatic → Marine → Gulf → Unclassified → Seawater	1.94%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	5.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2049941003	Hydrothermal vent microbial communities from Guaymas and Carmen Basins, Gulf of California, Sample 420	Environmental	Open in IMG/M
3300000146	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 120m	Environmental	Open in IMG/M
3300002533	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_80	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300002919	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental	Open in IMG/M
3300003498	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA	Environmental	Open in IMG/M
3300003501	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GB_4MN_00534160	2049941003	Hydrothermal Vents	MIQAGTGDVCLVFLSRRIFLGEDLRAAIDFQARRALFK
SI54feb11_120mDRAFT_100002624	3300000146	Marine	MIQAGTAEVCFVFLSRRIFRGEDLRAAIISQARRALFK*
JGI24925J35515_10027223	3300002533	Marine	LVLTXLLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK*
JGI26060J43896_100532061	3300002913	Marine	LFVFRIIQAGTAEVCFVFFNRRIFLGDDLRAAIVSQARRALFK*
JGI26061J44794_10582061	3300002919	Marine	VLTARFVLRIIQAGTGTACLVFFNRRIFLGEDLRAAIEFQARRALFK*
JGI26244J51143_10375383	3300003495	Marine	PLLVLRIIQAGTADVCFVFFNKRIFRGEDLRAAIDFQARRALFK*
JGI26239J51126_10120931	3300003498	Marine	GLVLTALFVLRIIQAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK*
JGI26243J51142_10065906	3300003501	Marine	LVLTALLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK*
JGI26243J51142_10635402	3300003501	Marine	VLTLLLVFRIIQAGTAEACFVFFSRRIFLGEDLRAAIDVQARKALFK*
Ga0055439_102384621	3300004019	Natural And Restored Wetlands	FDLTVLFVFKIIQAGTGDVCLVFFSRRIFRGDDLRAAINVQAR*
Ga0068996_101570531	3300005218	Natural And Restored Wetlands	TVLFVFKIIQAGTGDVCLVFFSRRIFRGDDLRAAINVQAR*
Ga0066644_101065571	3300005237	Groundwater	TAEVCLVFFNRRIFLGEDLRAAIDFQARRALFKSCVRIGRTQ*
Ga0074476_10897632	3300005825	Sediment (Intertidal)	RIIQAGTAEVCLVFFNRRIFLGEDLRAAIDFQARKALFK*
Ga0066375_100899993	3300006019	Marine	RFVLRIIQAGTGTACFVFFSRRIFLGEDLRAAIEFQARRALFK*
Ga0081601_12535492	3300006079	Diffuse Hydrothermal Fluid	AGTAEVCFVFLSRRIFLGEDLRAAIVCQARRALFK*
Ga0082250_100029002	3300006465	Sediment	LRMIQAGTGDVCLVFLRRRIFRGEDLRAAIDCQARRALFK*
Ga0082251_100416054	3300006468	Sediment	LGLVRTVLLVLIITQAGTGLVCLVFFNRRIFLGDDLRAAID*
Ga0105011_10355144	3300007508	Marine	LGLVLTDLFVLRIIHAGTGDVSFVFFNKRIFLPERLRAAIKSQA*
Ga0105012_10486844	3300007509	Marine	LGLVLTDLFVLRIIHAGTGDVSFVFFNKRIFLPERLRAAMKSQA*
Ga0105012_11861011	3300007509	Marine	RLGLVLTDLFVLRIIHAGTGDVSFVFFNKRIFLPERLRAAMKSQA*
Ga0102904_10278773	3300007981	Estuarine	LVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK*
Ga0105351_11866922	3300008254	Methane Seep Mesocosm	QAGTAEACFVFLSRRIFLGEDLRAAIVCQARRALFK*
Ga0115660_11857561	3300008738	Marine	TDLFVLRIIHAGTGDVSFVFFNKRIFLPERLRAAMKSQA*
Ga0102887_11041011	3300008961	Estuarine	TLLLVFRIIQAGTAEACFVFFSRRIFLGEDLRAAIDVQARKALFK*
Ga0117915_10722781	3300009332	Marine	TPLFVLRIIQAGTAEVCFVFFNKRIFRGEDLRAAISFQARRALFK*
Ga0117928_10946413	3300009339	Marine	RIIQAGTADACFVFFNRRIFLGEDLRAAIVVQARRALFK*
Ga0117756_10993061	3300009408	Marine	VLTLLLVLRIIQAGTADVCFVFFNRRIFRGEDLRAAIEFQARRALFK*
Ga0114997_103725942	3300009425	Marine	GTADVCFVFFNKRIFLGEDFRAAIDCQARRALFK*
Ga0115007_101564761	3300009441	Marine	VLRMIQAGTADVCFVFFNRRIFLGEDFRAAIDCQARRALFK*
Ga0114932_108048041	3300009481	Deep Subsurface	AGTAVACFVFFNRRIFRGEDLRAAIEFQARRALFK*
Ga0115568_104502261	3300009498	Pelagic Marine	TVLLVLRMIQAGTADVCFVFFNKRIFLGEDFRAAIDCQARRALFK*
Ga0115002_106277382	3300009706	Marine	LRIIQAGTADVCFVFFNRRIFLGEDLREAIDCQARRALFK*
Ga0114999_113101832	3300009786	Marine	LVLRIIQAGTADVCFVFFNRRIFLGEDLRAAIVCQARKALFK*
Ga0118733_1044296762	3300010430	Marine Sediment	LFVLRIIHAGTAEVCLVFFNRRIFLGEDLRAAIDFQARRALFK*
Ga0139247_10211261	3300010967	Hydrothermal Chimney Microbial Mat	VLRIIHAGTAEVCLVFFRRRIFLGEDLRAAIDFQARGALFK*
Ga0139246_11237841	3300010969	Hydrothermal Chimney Microbial Mat	TPRLVLRIIHAGTAEVCLVFFRRRIFLGEDLRAAIDFQARGALFK*
Ga0134293_10103951	3300014973	Marine	LVLTALLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK*
Ga0211694_103123761	3300020464	Marine	IQAGTAVACFVFFSRRIFLGEDLRAAIVFQARRALFK
Ga0206686_10000237	3300021065	Seawater	MIQAGTAEVCFVFLSRRIFRGEDLRAAIISQARRALFK
Ga0206684_12388492	3300021068	Seawater	LVLRIIQAGTADVCFIFFNKRIFLGDDLRAAIVCQARKALFK
Ga0206678_102577891	3300021084	Seawater	LLVLRIIQAGTADVCFVFFNKRIFLGEDLRAAIDCQARKALFK
Ga0206683_103338102	3300021087	Seawater	AGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK
Ga0224503_103268971	3300022201	Sediment	FVLRIIHAGTAEVCLVFLSKRIFLGEDLRAAIDFQARGALFK
Ga0224498_100125691	3300022202	Sediment	HAGTAEVCLVFFNRRIFLGEDLRAAIDFQARRALFK
Ga0224513_100049091	3300022220	Sediment	LVLRIIQAGTGEACFVFFSRRIFLGEDLRAAIDFQARRALFK
Ga0224506_100793301	3300022221	Sediment	LFVLRIIQAGTGDACLVFFRRRIFLGDDLRAAIVFQARRALFK
Ga0224508_101458471	3300022413	Sediment	IIQAGTGEACFVFFSRRIFLGEDLRAAIDFQARRALFK
Ga0224508_108528832	3300022413	Sediment	TAEVCLVFFNRRIFLGEDLRAAIDFQARRALFKPCVQICGA
(restricted) Ga0233429_10160655	3300022902	Seawater	QAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK
(restricted) Ga0233430_11740453	3300022912	Seawater	IIQAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
(restricted) Ga0233431_11371083	3300022916	Seawater	AGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
(restricted) Ga0233431_12949631	3300022916	Seawater	LVLTALLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQ
(restricted) Ga0233435_10348224	3300024252	Seawater	LVLTALLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK
(restricted) Ga0233435_10879091	3300024252	Seawater	QAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
(restricted) Ga0233442_10201374	3300024257	Seawater	ALFVLRIIQAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
(restricted) Ga0233442_10526001	3300024257	Seawater	RIIHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
(restricted) Ga0233441_11440161	3300024260	Seawater	VFKIIHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
(restricted) Ga0233439_100963543	3300024261	Seawater	IHAGTAEACFVFFNKRIFLGEDLRAAIDVQARRALFK
(restricted) Ga0233434_10539024	3300024327	Seawater	VLTLLLVFRIIQAGTAEACFVFFSRRIFLGEDLRAAIDVQARKALFK
(restricted) Ga0255056_102327893	3300024521	Seawater	LVLRITQAGTAEVCLVFFNRRIFLGEDLRAAIDFEPRRALFK
(restricted) Ga0255056_105533261	3300024521	Seawater	IQAGTGDVCLVFLRRRIFRGEDLRAAIDCQARRALFK
Ga0210019_10586541	3300025142	Groundwater	IHAGTAEVCLVFFNRRIFLGEDLRAAIDFQARRALFKSCVRIGRTQ
Ga0209449_10845091	3300025431	Marine	LVLTALLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQ
Ga0209685_10228733	3300025468	Marine	AGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0209142_10459363	3300025545	Marine	MIQAGTADVCFVFFNKRIFLGDDFRAAIDCQARRALFK
Ga0209658_10172484	3300025592	Marine	QAGTADVCFVFFNKRIFRGEDLRAAIDFQARRALFK
Ga0209041_10181514	3300025623	Marine	LVLTALFVLRIIHAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0209054_10125381	3300025656	Marine	KIIHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
Ga0209664_11170111	3300025662	Marine	FVFRIIHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
Ga0209494_11607332	3300025673	Methane Seep Mesocosm	LLVLSIIQAGTAVACFVFFSRRIFLGEDLRAAIVFQARRALFK
Ga0209044_10036641	3300025709	Marine	IIHAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0209305_10072866	3300025712	Pelagic Marine	SIIQAGTAVACFVFFSRRIFLGEDLRAAIVFQARRALFK
Ga0209047_10258641	3300025727	Marine	RIIHAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0209558_10250481	3300025729	Marine	VLTALFVLRIIHAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0210124_11238831	3300026007	Natural And Restored Wetlands	TQAGTGEVCFVFFNRRIFLGDDLRAAIDFEPRRALFK
Ga0208308_10458242	3300027228	Estuarine	RIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK
Ga0208950_11208162	3300027413	Marine	LVLTALLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK
Ga0208971_11363651	3300027582	Marine	LVLTLLLVFRIIQAGTAEACFVFFSRRIFLGEDLRAAIDVQARKALFK
Ga0209302_102197903	3300027810	Marine	LVLRIIQAGTAVACFVFFNKRIFLGEDLRAAIVCQARKALFK
Ga0209090_105559421	3300027813	Marine	LLVLRIIQAGTADVCFVFFNKRIFLGEDLRAAIVCQARKALFK
Ga0209035_101044613	3300027827	Marine	AGTAEVCFVFFNRRIFRGDDLRAAIVSQARRALFK
Ga0209501_100588301	3300027844	Marine	LVLTALLVLRIIQAGTADVCFVFFNKRIFRGEDLRAAIDCQARKALFK
Ga0209272_102754651	3300027967	Marine Sediment	HAGTAEVCLVFLSRRIFLGEDLRAAIDFQARRALFK
Ga0257123_10874973	3300028174	Marine	MIQAGTADVCFVFFNKRIFLGDDFRAAIDCQARRAL
Ga0257123_11084731	3300028174	Marine	FVLRIIQAGTAEVCFVFFNKRIFRGEDLRAAISFQARRALFK
Ga0257117_10080315	3300028175	Marine	GLVLTALFVLRIIQAGTGDACLVFFNRRIFRGEDLRAAIEFQARRALFK
Ga0257121_12605551	3300028198	Marine	IHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
Ga0257115_11429021	3300028706	Marine	LVLTDLLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK
Ga0308010_10635693	3300031510	Marine	MIQAGTADVCFVFFNKRIFLGEDFRAAIDCQARRALFK
Ga0302137_12316161	3300031588	Marine	LVLTDLLVLRIIQAGTAVVCFVFFNKRIFLGEDLRAAIVCQARKA
Ga0315332_105148462	3300031773	Seawater	AGTADACFVFFNKRIFLGEDLRAAIDVQARRALFK
Ga0315326_109137602	3300031775	Seawater	AGTADVCFVFFNKRIFRGEDLRAAIDCQARKALFK
Ga0310120_102950433	3300031803	Marine	TVLLVLRIIQAGTADVCFVFFNKRIFLGVDLRAAIVCQARKALFK
Ga0310120_103292471	3300031803	Marine	LLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK
Ga0315318_101001544	3300031886	Seawater	LTLLFVFRIIQAGTADACFVFFNKRIFLGEDLRAAIDVQARRALFK
Ga0315278_120875562	3300031997	Sediment	DLTVLFVFRIIQAGTGDACLVFFNRRIFLGDDLRAAINIQAR
Ga0315315_111164872	3300032073	Seawater	LLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALFK
Ga0315315_115076111	3300032073	Seawater	LVLTALLVLRIIQAGTADACFVFFNNRIFLGEDLRAAIVCQARKALF
Ga0315333_100681411	3300032130	Seawater	IIHAGTAEACFVFFNRRIFLGEDLRAAIDVQARRALFK
Ga0316202_100170671	3300032277	Microbial Mat	IHAGTADVCLVFLSRRIFLGEDLRAAIDFQARRALFK
Ga0315334_107102333	3300032360	Seawater	TALLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALFK
Ga0315334_111387721	3300032360	Seawater	RIIHAGTAEACFVFFNKRIFLGDDLRAAIDVQARRALFK
Ga0315334_112428681	3300032360	Seawater	LVLTDLLVLRIIQAGTADACFVFFNKRIFLGEDLRAAIVCQARKALF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters