Metagenome Family F099293

Overview

Basic Information

• Family ID: F099293
• Family Type: Metagenome
• Number of Sequences: 103
• Average Sequence Length: 46 residues
• Representative Sequence: MLDYKQRLDSIMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV
• Number of Associated Samples: 64
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 83.33 %
• % of genes near scaffold ends (potentially truncated): 18.45 %
• % of genes from short scaffolds (< 2000 bps): 77.67 %
• Associated GOLD sequencing projects: 56
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (69.903 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (17.476 % of family members)
• Environment Ontology (ENVO): Unclassified (37.864 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (52.427 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 47.95%
  β-sheet: 0.00%
  Coil/Unstructured: 52.05%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01541	GIY-YIG	2.91
PF00004	AAA	0.97
PF00565	SNase	0.97
PF04983	RNA_pol_Rpb1_3	0.97
PF00768	Peptidase_S11	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0086	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	Transcription [K]	0.97
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
All Organisms	root	All Organisms	30.10 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Viruses	superkingdom	All Organisms → Viruses	28.16 %
cellular organisms	root	All Organisms → cellular organisms	1.94 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.94 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.97 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.65 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002835|B570J40625_100734675	Not Available	878
3300004112|Ga0065166_10133174	Not Available	935
3300005582|Ga0049080_10008825	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3496
3300005662|Ga0078894_10071559	Not Available	2996
3300005662|Ga0078894_10127898	Not Available	2266
3300005662|Ga0078894_10162465	Not Available	2012
3300005662|Ga0078894_10166177	All Organisms → Viruses → Predicted Viral	1989
3300005662|Ga0078894_10250694	Not Available	1605
3300005662|Ga0078894_10297997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1462
3300005662|Ga0078894_10462760	Not Available	1141
3300005662|Ga0078894_10898355	Not Available	768
3300005662|Ga0078894_11027467	Not Available	708
3300005662|Ga0078894_11342444	Not Available	600
3300005941|Ga0070743_10111132	Not Available	919
3300006484|Ga0070744_10039164	Not Available	1397
3300006484|Ga0070744_10056382	Not Available	1148
3300006484|Ga0070744_10060060	All Organisms → Viruses → Predicted Viral	1109
3300006484|Ga0070744_10157397	Not Available	651
3300006484|Ga0070744_10205126	Not Available	560
3300006484|Ga0070744_10214475	Not Available	546
3300006641|Ga0075471_10379824	Not Available	711
3300006641|Ga0075471_10546074	Not Available	572
3300006875|Ga0075473_10136904	Not Available	981
3300007559|Ga0102828_1031947	All Organisms → Viruses → Predicted Viral	1184
3300007559|Ga0102828_1035515	Not Available	1130
3300007560|Ga0102913_1056713	Not Available	1277
3300007562|Ga0102915_1236212	Not Available	592
3300007590|Ga0102917_1249192	Not Available	616
3300007606|Ga0102923_1106577	Not Available	879
3300007644|Ga0102902_1225711	Not Available	551
3300007653|Ga0102868_1120362	Not Available	610
3300007667|Ga0102910_1128033	Not Available	594
3300008950|Ga0102891_1235845	Not Available	526
3300009024|Ga0102811_1360576	Not Available	548
3300009026|Ga0102829_1323756	Not Available	516
3300009059|Ga0102830_1192553	Not Available	597
3300009159|Ga0114978_10030308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3873
3300009161|Ga0114966_10366280	Not Available	852
3300009164|Ga0114975_10020774	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3985
3300009419|Ga0114982_1011057	All Organisms → Viruses → Predicted Viral	3183
3300009419|Ga0114982_1076138	Not Available	1043
3300009419|Ga0114982_1117791	Not Available	820
3300010160|Ga0114967_10020628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4620
3300010160|Ga0114967_10477704	Not Available	612
3300010354|Ga0129333_10135927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	2260
3300012352|Ga0157138_1012589	All Organisms → Viruses → Predicted Viral	1385
3300012352|Ga0157138_1035323	Not Available	792
3300012352|Ga0157138_1079537	Not Available	514
3300012663|Ga0157203_1000144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	25161
3300012663|Ga0157203_1007592	All Organisms → Viruses → Predicted Viral	1924
3300012665|Ga0157210_1003944	All Organisms → Viruses → Predicted Viral	3271
3300012665|Ga0157210_1009202	All Organisms → Viruses → Predicted Viral	1787
3300012665|Ga0157210_1035937	Not Available	770
3300013005|Ga0164292_10541499	Not Available	758
3300020141|Ga0211732_1537394	Not Available	787
3300020141|Ga0211732_1557836	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1431
3300020151|Ga0211736_10850256	Not Available	584
3300020151|Ga0211736_10936927	Not Available	1645
3300020151|Ga0211736_11033641	Not Available	711
3300020159|Ga0211734_10154025	Not Available	535
3300020159|Ga0211734_11104112	Not Available	1110
3300020160|Ga0211733_10568818	Not Available	583
3300020172|Ga0211729_10691238	Not Available	1194
3300020205|Ga0211731_10506870	Not Available	863
3300020480|Ga0208201_103836	All Organisms → cellular organisms → Bacteria	1280
3300021952|Ga0213921_1049708	Not Available	620
3300021956|Ga0213922_1002555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6169
3300021956|Ga0213922_1008251	Not Available	2991
3300021956|Ga0213922_1011324	All Organisms → Viruses → Predicted Viral	2462
3300021961|Ga0222714_10011662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7444
3300021963|Ga0222712_10463572	Not Available	757
3300021963|Ga0222712_10619494	Not Available	622
3300021963|Ga0222712_10745168	Not Available	546
3300022747|Ga0228703_1009852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3629
3300024343|Ga0244777_10060593	All Organisms → Viruses → Predicted Viral	2426
3300024343|Ga0244777_10572929	Not Available	687
3300024346|Ga0244775_10090421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2609
3300024346|Ga0244775_10270179	All Organisms → Viruses → Predicted Viral	1414
3300024346|Ga0244775_10372112	Not Available	1177
3300024346|Ga0244775_11122856	Not Available	615
3300024348|Ga0244776_10266758	Not Available	1184
3300025872|Ga0208783_10231390	Not Available	754
3300027193|Ga0208800_1061518	Not Available	512
3300027286|Ga0255129_1052695	Not Available	627
3300027292|Ga0255134_1018248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1233
3300027320|Ga0208923_1084619	Not Available	561
3300027593|Ga0255118_1022421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1164
3300027631|Ga0208133_1053858	Not Available	970
3300027631|Ga0208133_1115333	Not Available	625
3300027710|Ga0209599_10020031	Not Available	1893
3300027710|Ga0209599_10087057	Not Available	820
3300027732|Ga0209442_1153003	Not Available	887
3300027759|Ga0209296_1062835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1889
3300027763|Ga0209088_10019859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3490
3300027769|Ga0209770_10290593	Not Available	625
3300027769|Ga0209770_10366018	Not Available	538
3300027770|Ga0209086_10355287	Not Available	605
3300028394|Ga0304730_1031260	All Organisms → Viruses → Predicted Viral	2752
3300032092|Ga0315905_10145712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2363
3300033994|Ga0334996_0007644	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7273
3300034082|Ga0335020_0236047	Not Available	907
3300034102|Ga0335029_0214436	Not Available	1268

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.15%
Terrestrial	Environmental → Terrestrial	4.85%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.31%
Marine	Environmental → Aquatic → Marine	38.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.85%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	22.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.50%
Lotic	Environmental → Aquatic → Freshwater → Lotic	7.77%
Creek	Environmental → Aquatic → Freshwater → Creek	4.85%
Coastal	Environmental → Aquatic → Marine → Coastal	4.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.85%
River	Environmental → Aquatic → Freshwater → River	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.97%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	22.33%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	17.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.56%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	7.77%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.88%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.97%

Habitat

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	17.48%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.59%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	12.62%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.74%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	7.77%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	4.85%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.88%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.88%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.94%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300020480	Freshwater microbial communities from Lake Mendota, WI - 16JUL2010 deep hole epilimnion (SPAdes)	Environmental
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental
3300024346	Whole water sample coassembly	Environmental
3300024348	0.2um to 3um size fraction coassembly	Environmental
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental
3300027286	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8d	Environmental
3300027292	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d	Environmental
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental
3300027593	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h	Environmental
3300027598	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8h	Environmental
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1007346752	3300002835	Freshwater	MSDYKQRLDSIMLQLQTIIDEEYEDNANIQDAFNALACALDEEIIS*
Ga0065166_101331742	3300004112	Freshwater Lake	MLTYKQRLDSIMLQLQDIIDEEYEENDNVQTAFNNLAVVLDDNPVDNQ*
Ga0049080_100088255	3300005582	Freshwater Lentic	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0078894_100715594	3300005662	Freshwater Lake	MSEYKKRLDNALIQLQAIIDEHYEDNDNVQDAFNMLAVVLDEESE*
Ga0078894_101278986	3300005662	Freshwater Lake	MSDYKQRLDNALVQLQYILDEQFEDNEDIQNAFNALACALDYYVEEE*
Ga0078894_101624653	3300005662	Freshwater Lake	MLTYKQRLDSIMLQLQDIIEEEYEDNDYVQTAFNNLAVVLDDNPVDNQ*
Ga0078894_101661776	3300005662	Freshwater Lake	MSDYKQRLDNIMLQLQAIIDEEYEENDCIQTAFNALACALDDVVE*
Ga0078894_102506945	3300005662	Freshwater Lake	MLDYKQRLDSIMLQLQSIIDEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0078894_102979974	3300005662	Freshwater Lake	MLTYKQKLDQAMLALQTLIDERLEEDDAVQTAFNDLACALDDVVN*
Ga0078894_104627605	3300005662	Freshwater Lake	RLDNIMLQLQAIIDEEYEENDVIQTAFNNLAIALDEEIIS*
Ga0078894_108983553	3300005662	Freshwater Lake	MQDYKQRLDNIMLQLQSIIEEEFEEHNAIQTAFNNLACALDEELYE*
Ga0078894_110274672	3300005662	Freshwater Lake	MQDYKQRLDNIMLQLQSIIEEEYEEHNAIQTAFNALACALDEEHYKA*
Ga0078894_113424442	3300005662	Freshwater Lake	MLTYKQRLDNIMLQLQTIIDEEYEENDYVQTAFNNLAIILDDNPPDNT*
Ga0070743_101111321	3300005941	Estuarine	RLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0070744_100391642	3300006484	Estuarine	MLDYKQRLDNVMLQLQSIIDEEYEDNDNVQDAFNMLAVVLDEETARSVNR*
Ga0070744_100563821	3300006484	Estuarine	QRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV*
Ga0070744_100600604	3300006484	Estuarine	MLEYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLA
Ga0070744_101573973	3300006484	Estuarine	MLDYKQRLDNAMLQLQFIIDEDYEDNDNVQDAFNMLAVVLDEETARSINR*
Ga0070744_102051262	3300006484	Estuarine	QRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPA*
Ga0070744_102144753	3300006484	Estuarine	MLDYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNP
Ga0075471_103798241	3300006641	Aqueous	MSDYKQRLDNIMLQLQIIIDEEYEDNDSVQDAFNNLAIVLDGESE*
Ga0075471_105460741	3300006641	Aqueous	MLDYKQRLDNAMLQLQMIIDEEYEDNDNIQTAFNNLAEALDNPDNQ*
Ga0075473_101369043	3300006875	Aqueous	MLTYKQRLDNALLQLQYIIDEEYEENDRVQTAFNNLAIILDDNPPDNQ*
Ga0102828_10319472	3300007559	Estuarine	MLEYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0102828_10355151	3300007559	Estuarine	MLDYKQRLDSIMLQLQALIDEEYEDNDYVQTAFNNLACTLDDNPV*
Ga0102913_10567132	3300007560	Estuarine	MLDYRQRLDSIMLQLQEIIEEEYEDNDNVQDAFNMLAVVLDEETARSINR*
Ga0102915_12362121	3300007562	Estuarine	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIISDDNPV*
Ga0102917_12491921	3300007590	Estuarine	MLDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0102923_11065772	3300007606	Estuarine	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLACTLDDNPV*
Ga0102902_12257111	3300007644	Estuarine	DYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV*
Ga0102868_11203621	3300007653	Estuarine	LFNKKELIMQNYKQRLDNAMLQLQYIIDEEYEENDYVQTAFNNLAII
Ga0102910_11280331	3300007667	Estuarine	MLDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDD
Ga0102891_12358452	3300008950	Estuarine	RLDSIMLQLQSIIDEEYEDNDVIQDAFNNLACILDGESE*
Ga0102811_13605762	3300009024	Estuarine	MLDYKQRLDSIMLQLQALIDEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0102829_13237562	3300009026	Estuarine	MLDYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV*
Ga0102830_11925531	3300009059	Estuarine	MLDYKQRLDSIMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0114978_100303083	3300009159	Freshwater Lake	LLNRKQKGDINMLDYKQRLDNAMLQLQMIIDEEYEDNDNVQTAFNNLAVALDEETARSINS*
Ga0114966_103662801	3300009161	Freshwater Lake	MQDYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPA*
Ga0114975_100207746	3300009164	Freshwater Lake	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLACILDDNPV*
Ga0114982_10110571	3300009419	Deep Subsurface	MQDYKQRLDSIMLQLQMIIDEEFEDNDLVQDAFNNLAVVLDDNPV*
Ga0114982_10761382	3300009419	Deep Subsurface	MSDYKQRLDSIMLQLQDIIEEEYEDNDYVQTAFNNLACILDDNPV*
Ga0114982_11177911	3300009419	Deep Subsurface	MSEYKQRLDSLMLQLQTLIDEDYEDNVTIQDAFNNLAIALDAEII*
Ga0114967_100206282	3300010160	Freshwater Lake	MSDYKQRLDNALIQLQYIIDEEFEDNQTVQDAFNNLAIILDGESE*
Ga0114967_104777041	3300010160	Freshwater Lake	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLA
Ga0129333_101359273	3300010354	Freshwater To Marine Saline Gradient	MLEYKQRLDNIMLQLQTIIDEEYEENDRVQTAFNNLAVVLDEEYARNII*
Ga0157138_10125892	3300012352	Freshwater	MSDYKQRLDNIMLQLQAIIEEEYEEHNAIQTAFNNLACALDEELYANN*
Ga0157138_10353232	3300012352	Freshwater	MLTYKQRLDNIMLQLQTIIDEEYEENDCIQTAFNALACALDDVVE*
Ga0157138_10795372	3300012352	Freshwater	MSDYKHRLDNALVQLQYIIDEQFEDNQTVQDAFNNLAIILDGEYEE*
Ga0157203_100014455	3300012663	Freshwater	MQDYTQRLDNIMLQLQSILDEEYEDNDKIQTAFNNLAIALDEELGV*
Ga0157203_10075923	3300012663	Freshwater	MSDYTQRLDSIMLQLQEIIDEEYEDNNKIQTAFNNLAIALDEELGV*
Ga0157210_10039443	3300012665	Freshwater	MLTYKQKLDQAMLALQTVIDERLEEDDTVQTAFNDLACALDDVVE*
Ga0157210_10092022	3300012665	Freshwater	MSDYRQRLDNALVQLQYILDEQFEDNEDIQNAFNALACALDYHVEEE*
Ga0157210_10359373	3300012665	Freshwater	MSDYKQRLDSIMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV*
Ga0164292_105414991	3300013005	Freshwater	LDYKQRLDNAMLQLQFIIEEEYEDNDRVQTAFNNLAVALDEETARSNS*
Ga0211732_15373942	3300020141	Freshwater	MLDYKQRLDNAMLQLQYIIDEEYEDNDNVQDAFNMLAVVLDEETARSINS
Ga0211732_15578361	3300020141	Freshwater	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQDAFNNLAIILDDNPV
Ga0211736_108502562	3300020151	Freshwater	MLDYKQRLDNAMLQLQYIIDEEYEDNDNVQDAFNMLAVVLDEETARSIKE
Ga0211736_109369273	3300020151	Freshwater	MSDYKQRLDNALVQLQYIIDEEFEDNQTVQDAFNNLAIILDGESE
Ga0211736_110336412	3300020151	Freshwater	MLDYKQKMDSIMLQLQSLIDEEYEDNDYVQTAFNNLAIALDNPDNE
Ga0211734_101540251	3300020159	Freshwater	MSDYKQRLDSIMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV
Ga0211734_111041121	3300020159	Freshwater	MLDYKQRLDNAMLQLQYIIDEEYEDNDNVQDAFNMLAVVIDEETARSNS
Ga0211733_105688181	3300020160	Freshwater	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV
Ga0211729_106912381	3300020172	Freshwater	MSDYQKRLDSIMLQLQTIIDEEYEDNDNVQTAFNNLAIALDDEYNECYNINNTR
Ga0211731_105068701	3300020205	Freshwater	MLDYKQRLDNAMLQLQYIIDEDYEDNDNVQDAFNMLAVVLDEETARSINS
Ga0208201_1038362	3300020480	Freshwater	MSEYKKRLDNALIQLQAIIDEQYEDNDNVQDAFNMLAVVLDEESE
Ga0213921_10497082	3300021952	Freshwater	MSDYKQRLDNALIQLQYIIDEEYEDNEAIQTAFNNLAIVLDGEYDE
Ga0213922_10025554	3300021956	Freshwater	MSDYKHRLDNALIQLQYIIDEEFEDNQTVQDAFNNLACALDGEYDEE
Ga0213922_10082514	3300021956	Freshwater	MQDYKQRLDNAMLQLQAIIDEEYEENDNIQTAFNDLACALDEELE
Ga0213922_10113244	3300021956	Freshwater	MPDYKQRLDNALIQLQYIIDEQYEDNDAIQTAFNNLALALDEEDNT
Ga0222714_1001166221	3300021961	Estuarine Water	MSDYKQRLDNIMLQLQIIIDEEYEENDVIQTAFNNLACALDEEIIS
Ga0222712_104635723	3300021963	Estuarine Water	MSDNKSKLDNLMLQIQEIIDEDYEDNDYLQTAFNNLAIALDDIIA
Ga0222712_106194941	3300021963	Estuarine Water	MSEYKQRLDNAMLQLQAIIDEEYEENDYVQTAFNNLAIILDDNPPDNQ
Ga0222712_107451681	3300021963	Estuarine Water	MQDYRQRLDNIMLQLQIIIDEEYEDNDRVQTAFNNLAIVLDGESE
Ga0228703_100985212	3300022747	Freshwater	MSDYKQRLDNALIQLQYIIDEQYEDNDAVQTAFNNLAIVLDGEYDE
Ga0244777_100605935	3300024343	Estuarine	MLDYKQRLDNAMLQLQFIIDEDYEDNDNVQDAFNMLAVVLDEETARSINR
Ga0244777_105729291	3300024343	Estuarine	MLDYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV
Ga0244775_100904213	3300024346	Estuarine	MLDYKQRLDSIMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV
Ga0244775_102701793	3300024346	Estuarine	MQDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV
Ga0244775_103721122	3300024346	Estuarine	MLDYKQRLDNVMLQLQSIIDEEYEDNDNVQDAFNMLAVVLDEETARSVNR
Ga0244775_111228561	3300024346	Estuarine	EYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPA
Ga0244776_102667582	3300024348	Estuarine	MLEYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV
Ga0208783_102313901	3300025872	Aqueous	MQNYKQRLDNAMLQLQMIIDEEYEDNDNIQTAFNNLAEALDNPDNQ
Ga0208800_10615181	3300027193	Estuarine	MLDYKQRLDSIMLQLQALIDEEYEDNDYVQTAFNNLACTLDDNPV
Ga0255129_10526953	3300027286	Freshwater	TQRLDNIMLQLQSILDEEYEDNNKIQTAFNNLAIALDEELGV
Ga0255134_10182481	3300027292	Freshwater	NSLLSSKRIIMLEYTQRLDNIMLQLQSILDEEYEDNNKIQTAFNNLAIALDEELGV
Ga0208923_10846191	3300027320	Estuarine	YKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV
Ga0255118_10224214	3300027593	Freshwater	YTQRLDNIMLQLQSILDEEYEDNNKIQTAFNNLAIALDEELGV
Ga0255121_10125487	3300027598	Freshwater	MLQLQSILDEEYEDNNKIQTAFNNLAIALDEELGV
Ga0208133_10538583	3300027631	Estuarine	IMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPV
Ga0208133_11153332	3300027631	Estuarine	MLEYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPA
Ga0209599_100200314	3300027710	Deep Subsurface	MQDYKQRLDSIMLQLQMIIDEEFEDNDLVQDAFNNLAVVLDDNPV
Ga0209599_100870573	3300027710	Deep Subsurface	MSEYKQRLDSLMLQLQTLIDEDYEDNVTIQDAFNNLAIALDAEII
Ga0209442_11530032	3300027732	Freshwater Lake	MSDYKQRLDNIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPV
Ga0209296_10628356	3300027759	Freshwater Lake	MLDYKQRLDNAMLQLQMIIDEEYEDNDNVQTAFNNLAVALDEETARSINS
Ga0209088_100198593	3300027763	Freshwater Lake	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLACILDDNPV
Ga0209770_102905932	3300027769	Freshwater Lake	MSDYKQRLDSIMLQLQEIIEEEYEDNDYVQTAFNNLAVVLDDNPVDNQ
Ga0209770_103660182	3300027769	Freshwater Lake	MSDYKQRLDNAFVQLQYIIDEQFEDNEDIQNAFNALACALDYYVEEE
Ga0209086_103552872	3300027770	Freshwater Lake	MQDYKQRLDSIMLQLQAIIDEEYEDNDYVQTAFNNLACTLDDNPA
Ga0304730_10312601	3300028394	Freshwater Lake	MSDYKQRLDNALIQLQYIIDEEFEDNQTVQDAFNNLAIILDGESE
Ga0315905_101457126	3300032092	Freshwater	MLTYKQKLDQAMLALQTLIDERLEEDDAVQTAFNDLACALDDVVN
Ga0334996_0007644_6598_6738	3300033994	Freshwater	MSDYKQRLDSIMLQLQTIIDEEYEDNANIQDAFNALACALDEEIIS
Ga0335020_0236047_599_736	3300034082	Freshwater	MLTYKQRLDNIMLQLQEIIEEEYEDNDYVQTAFNNLAIILDDNPA
Ga0335029_0214436_718_855	3300034102	Freshwater	MLTYKQKLDSLMLQLQEIIDEEYEDNDYVQTAFNNLAIILDDNPV