Basic Information | |
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Family ID | F099165 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 103 |
Average Sequence Length | 43 residues |
Representative Sequence | MGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHGQRLN |
Number of Associated Samples | 70 |
Number of Associated Scaffolds | 103 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 16.50 % |
% of genes near scaffold ends (potentially truncated) | 38.83 % |
% of genes from short scaffolds (< 2000 bps) | 85.44 % |
Associated GOLD sequencing projects | 66 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (58.252 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (26.214 % of family members) |
Environment Ontology (ENVO) | Unclassified (30.097 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (48.544 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 41.86% β-sheet: 0.00% Coil/Unstructured: 58.14% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Freshwater Freshwater, Plankton Freshwater Lake Freshwater Freshwater And Marine Aquatic Freshwater Freshwater Aqueous Freshwater To Marine Saline Gradient Estuarine Estuary |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
FwDRAFT_102330442 | 3300000882 | Freshwater And Marine | LDIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGHRLN* |
Ga0068877_106861062 | 3300005525 | Freshwater Lake | LSSWIFLNQQLRKTELTSETAEINHASLCEELGLDAEHGKR |
Ga0068872_100882182 | 3300005528 | Freshwater Lake | MVEDQQLRTTELTSETAEINYTPLCEELGLDTKHGPRLS* |
Ga0068872_106794052 | 3300005528 | Freshwater Lake | LSSWIFLNQQLRKTELTSETAEINHASLCEELGLDAEHG |
Ga0068885_11549682 | 3300005565 | Freshwater Lake | LGSWILLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN* |
Ga0075470_100539923 | 3300006030 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHG* |
Ga0075470_101435782 | 3300006030 | Aqueous | MGSWTVKNQQLRKTELASETAEINHAPLCEEPGLNAKHGQRLN* |
Ga0075470_101864961 | 3300006030 | Aqueous | MGSSIVKNQQLRKTELASKAAEINHTPLCEELGLDAKHEQRLN* |
Ga0075470_101900742 | 3300006030 | Aqueous | GSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHGQRLN* |
Ga0075470_102232801 | 3300006030 | Aqueous | KSLMGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHGERLN* |
Ga0075471_103176172 | 3300006641 | Aqueous | MVEDQQLRTTELTSETAEINYTPLCEVLGLDTKHGPRLS* |
Ga0075471_106127801 | 3300006641 | Aqueous | KNQQLRKTELASKAAEINHTPLCEELGLDAKHEQRLN* |
Ga0075459_10167473 | 3300006863 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN* |
Ga0075473_102747611 | 3300006875 | Aqueous | SVALNFKTLVIDIYFLLSKFLMGSWTVKNQQLRKTELASKAAEINHTPLCEELGLDAKHEQRLN* |
Ga0075473_103712902 | 3300006875 | Aqueous | SVALNFKTLVIDIYFLLSKFLMGSWTVKNQQLRKTELASKTAEINHAPLCEELGLNAKHGQRLN* |
Ga0075473_104072902 | 3300006875 | Aqueous | MGSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHGQRLN* |
Ga0075472_104353502 | 3300006917 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLNAEHGHRLN* |
Ga0075472_104908132 | 3300006917 | Aqueous | LDSKNQQLRKTELASEAAEINHAPLCEELGLDAKHGQRLN* |
Ga0075472_105157992 | 3300006917 | Aqueous | MGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHEQRLN* |
Ga0102532_10423166 | 3300007094 | Freshwater Lake | LGSWIFLNQQLRQTELTSETAEINHTPLCEELGLDAEHGHRLN* |
Ga0102978_10583473 | 3300007177 | Freshwater Lake | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLDAEHGHRLN* |
Ga0103274_11323607 | 3300007202 | Freshwater Lake | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLDAEHGQRLN* |
Ga0103959_12184272 | 3300007214 | Freshwater Lake | LGSWIFLNQQLRQTELTSETAEINHAPLCEELGLDAEHDQRLN* |
Ga0075458_100127905 | 3300007363 | Aqueous | MVEDQQLRTTELTSETAEINDTPLCEELGLDAKHDPRLS* |
Ga0075458_101066872 | 3300007363 | Aqueous | MGSWTVKNQQLRKTELASKTAEINHAPLCEELGLNAKHGQRLN* |
Ga0102877_12061832 | 3300007548 | Estuarine | LGSWIFLNQQLRKTELTGETAEINHAPLCEELGLDAEHGHRLN* |
Ga0102869_11592172 | 3300007627 | Estuarine | MVKDQQLRTTELTSETAEINYTPLCEELGLDTKHGPRLS* |
Ga0108970_107072801 | 3300008055 | Estuary | MGSWTVKNQQLRKTELASETAEINYAPLCEELGLDAKHGQRLN* |
Ga0114340_10423216 | 3300008107 | Freshwater, Plankton | MVEDQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN* |
Ga0114341_101939452 | 3300008108 | Freshwater, Plankton | MGSWTVKNQQLRKTELASKTAEINHAPLCEELGLDAKHGQRLN* |
Ga0114341_102158302 | 3300008108 | Freshwater, Plankton | MGSWTVKNQQLRKTELAREATEINHTSLCEELGLDAKHGQRLN* |
Ga0114341_103874782 | 3300008108 | Freshwater, Plankton | MGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHGQRLN* |
Ga0114341_105107411 | 3300008108 | Freshwater, Plankton | SWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN* |
Ga0114341_105139002 | 3300008108 | Freshwater, Plankton | GSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN* |
Ga0114341_105169251 | 3300008108 | Freshwater, Plankton | SWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGHRLN* |
Ga0114344_10159023 | 3300008111 | Freshwater, Plankton | MVEDQQLRTTELTSETAEINYTPLCEELGLDAKHGPRLS* |
Ga0114344_12293421 | 3300008111 | Freshwater, Plankton | GSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGHRLN* |
Ga0114347_10209708 | 3300008114 | Freshwater, Plankton | LGSWIFLNQQLRKTELTSETAEINHTPLCEEMGLDAEHGQRLN* |
Ga0114337_10976715 | 3300008262 | Freshwater, Plankton | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGLN* |
Ga0114337_11870212 | 3300008262 | Freshwater, Plankton | MGSWTVKNQQLRKTELASKAAEINHTPLCEELGLDAKHGQRLN* |
Ga0104242_10610652 | 3300008962 | Freshwater | MEINQQLRKTELASETAEINHTPLCEELGLDAKHRQRLN* |
Ga0129333_101527844 | 3300010354 | Freshwater To Marine Saline Gradient | MVKDQQLRTTELTSETAEINYTPLCEELGLDAKHGPRLS* |
Ga0129333_103213633 | 3300010354 | Freshwater To Marine Saline Gradient | WGCSNQQLRKTELASKTAEINHTPLGKELGLDEEHGLRID* |
Ga0129333_108709322 | 3300010354 | Freshwater To Marine Saline Gradient | LDSNNQQLRKTELASEAAEINYAPLCEKLGLNAKHGQRLN* |
Ga0129333_114914881 | 3300010354 | Freshwater To Marine Saline Gradient | FSRKLGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDTEHGYRLN* |
Ga0129336_105948262 | 3300010370 | Freshwater To Marine Saline Gradient | LLSKFLMGSWTVKNQQLRKTELASETAEINHTPLCEELGLDTKHEQRLN* |
Ga0129336_107443702 | 3300010370 | Freshwater To Marine Saline Gradient | MVEDQQLRTTELTSETAEINDTPLCEELGLDAKHGPRLS* |
Ga0119951_11162862 | 3300012000 | Freshwater | MEINQQLRKTELASETAEINHAPLCEELGLYAEHGE |
Ga0119955_11087482 | 3300012006 | Freshwater | LELLDQQLRTTELASETAEINHAPFCEELEPDAKHGRKNKRNPVM |
Ga0129337_13868113 | 3300012968 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGHRLN* |
Ga0129338_10042932 | 3300012970 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLNAKHGQRLN* |
Ga0119946_10049633 | 3300014801 | Aquatic | LELLDQQLRTTELASETAEINHTPLCEELEPDAKHG* |
Ga0208084_10011668 | 3300020499 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHTPLCEEMGLDAEHGQRLN |
Ga0207935_100051513 | 3300020516 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN |
Ga0208360_10375432 | 3300020551 | Freshwater | MVEDQQLRTTELTSETAEINYTPLCEELGLDAEHGQRLN |
Ga0214917_101067112 | 3300022752 | Freshwater | LDLKNQQLRTTELASETAEINHTPLCEELEPDAKHGVKSKRIKSL |
Ga0214917_101794813 | 3300022752 | Freshwater | MGSWTVKNQQLRKTELASETAEINHTSLCEELGLDAKHWQRLN |
Ga0255147_10538302 | 3300024289 | Freshwater | MVEDQQLRTTELTSETAEINDTPLCEELGLDAKHGPRLS |
Ga0255148_10604782 | 3300024306 | Freshwater | MVEDQQLRTTELTSETAEINDTPLCEELGLDAKHGPR |
Ga0255141_10319462 | 3300024351 | Freshwater | MDIYFLPSRFLMGSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHEQRLN |
Ga0256330_11394411 | 3300024481 | Freshwater | LDLKNQQLRTTELASETAEINHTPLCEELEPDAKHG |
Ga0255203_10504842 | 3300024491 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLDAEHG |
Ga0255189_10183501 | 3300024492 | Freshwater | LGSWTVKNQQLRKTELASKTAEINHAPLCEELGLDAKH |
Ga0255194_10459472 | 3300024494 | Freshwater | DIYFLPSRFLMGSWTVKNQQLRKTELASKTAEINHAPLCEELGLDAKHGQRLN |
Ga0255152_10487321 | 3300024503 | Freshwater | KILVIDIYFLLSKFLMGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHGQRLN |
Ga0255144_10215963 | 3300024513 | Freshwater | IDIYYLLSKFLMGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHGQRLN |
Ga0255144_10619541 | 3300024513 | Freshwater | MGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKH |
Ga0256339_10199841 | 3300024857 | Freshwater | MDIYFLPSRFLMGSWTVKNQQLRKTELASETAEINHAPLC |
Ga0255271_10622362 | 3300024864 | Freshwater | MVEDQQLRTTELTSETAEINDTPLCEELGLDAEHGHRLN |
Ga0256340_11236771 | 3300024865 | Freshwater | MDIYFLPSRFLMGSWTVKNQQLRKTELASETAEINHAPLCEELG |
Ga0256340_11463532 | 3300024865 | Freshwater | GSWTVKNQQLRKTELASETAEINHASLCEELGFDAKHRQRLN |
Ga0208546_10429713 | 3300025585 | Aqueous | NFKTLVIDIYFLPSRFLMGSWTGKNQQLRKTELASKTAEINHAPLCEELGLDAKHGHRLN |
Ga0208546_10862952 | 3300025585 | Aqueous | LDSKNQQLRKTELASKAAEINHTPLCEELGLDAKHEQRLN |
Ga0208546_11236532 | 3300025585 | Aqueous | MDIYFLPSRFLMGSWTVKNQQLRKTELASKTAEINHAPLCEELGLNAKHEQRLN |
Ga0208147_10219192 | 3300025635 | Aqueous | MVEDQQLRTTELTSETAEINDTPLCEELGLDAKHDPRLS |
Ga0208147_10486911 | 3300025635 | Aqueous | LEENQQLCTTELASETAEINHTPLCEELEPDTKHER |
Ga0208147_11045012 | 3300025635 | Aqueous | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHG |
Ga0208784_10385874 | 3300025732 | Aqueous | MGSWTVKNQQLRKTELASETAEINHAPLCEEPGLNAKHGQRLN |
Ga0208784_10493352 | 3300025732 | Aqueous | MGSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHGQRLN |
Ga0208005_10154052 | 3300025848 | Aqueous | MVEDQQLRTTELTSETAEINYTPLCEVLGLDTKHGPRLS |
Ga0255155_10165732 | 3300026455 | Freshwater | MVENQQLRTTELTSETAEINHAPLCEELGLDAKHGQRLN |
Ga0255156_10048723 | 3300026478 | Freshwater | MGSWTVKNQQLRKTELASKAAEINHTPLCEELALDAKHEQRLN |
Ga0255188_10293441 | 3300027079 | Freshwater | MGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAKHEQRLN |
Ga0255073_10544392 | 3300027135 | Freshwater | SVGSWIVEDQQLRTTELTSETAEINYTPLCEELGLDAKHGPRLS |
Ga0209358_102685373 | 3300027804 | Freshwater Lake | DIYFLLSKFLMGSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHGQRLN |
Ga0209990_100380205 | 3300027816 | Freshwater Lake | FLNQQLRKTELTSETAEINHTPLCEELGLDAEHGYRLN |
Ga0255200_10300312 | 3300028066 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDTEHG |
Ga0255192_10267231 | 3300028067 | Freshwater | SRKLGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHG |
Ga0255190_10316331 | 3300028083 | Freshwater | LLSKFLMGSWTVKNQQLRKTELASKTAEINYAPLCEELGLNSKHGQRLN |
Ga0255201_10158921 | 3300028086 | Freshwater | FKTLVIDIYYLLSKFLMGSWTVKNQQLRKTELASETAEINHTPLCEELGLDAEHG |
Ga0119945_10010134 | 3300029933 | Aquatic | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLDAEHGHRLN |
Ga0315907_106084991 | 3300031758 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGKRLS |
Ga0315900_107459142 | 3300031787 | Freshwater | LSSWIFLNQQLRKTELTSETAEINHASLCEELGLDAEHGKRLS |
Ga0315900_110841182 | 3300031787 | Freshwater | LGSWIFLIQQLRKTELTSETAEINHTPLCEELGIDAEHGQRLN |
Ga0315904_114002192 | 3300031951 | Freshwater | KNQQLRKTELASKTAEINHAPLCEELGLNAKHGQRLN |
Ga0315904_114344761 | 3300031951 | Freshwater | MGSWTVKNQQLRKTELASKTAEINHAPLCEELGLNAKHGQRLN |
Ga0315906_110083281 | 3300032050 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHASLCEELGLDAEHGKRLS |
Ga0315905_106229081 | 3300032092 | Freshwater | IFLNQQLRKTELTSETAEINHTPLCEELGLDAEHGQRLN |
Ga0315905_116227792 | 3300032092 | Freshwater | IYFLLSKNLMGSWTVKNQQLRKTELASETAEINHAPLCEELGLDAKHGQRLN |
Ga0315902_110470322 | 3300032093 | Freshwater | LGSWTVKNQQLRKTELASKTAEINHAPLCEELGLDAKHGQRLN |
Ga0315903_111140142 | 3300032116 | Freshwater | LGSWIFLNQQLRKTELTSETAEINHAPLCEELGLDAEHGQRLN |
Ga0334996_0074819_363_479 | 3300033994 | Freshwater | VEDQQLRTTELTSETAEINYTPLCEELGLDTKHGPRLS |
Ga0335066_0396728_641_754 | 3300034112 | Freshwater | LNQQLRKTELTSETAEINHTPLCEELGLDAEHGKRLS |
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