Metagenome / Metatranscriptome Family F099147

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099147
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	45 residues
Representative Sequence	MIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFKKK
Number of Associated Samples	75
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	28.16 %
% of genes from short scaffolds (< 2000 bps)	70.87 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.311 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (15.534 % of family members)
Environment Ontology (ENVO)	Unclassified (44.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.602 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.27% β-sheet: 0.00% Coil/Unstructured: 79.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF05521	Phage_H_T_join	28.16
PF05135	Phage_connect_1	26.21
PF01381	HTH_3	1.94
PF04765	DUF616	1.94
PF13489	Methyltransf_23	1.94
PF06199	Phage_tail_2	1.94
PF00149	Metallophos	0.97
PF04404	ERF	0.97
PF04586	Peptidase_S78	0.97
PF05065	Phage_capsid	0.97
PF13712	Glyco_tranf_2_5	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.97
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.19 %
Unclassified	root	N/A	39.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.31 %
Unclassified	root	N/A	39.81 %
Viruses	superkingdom	All Organisms → Viruses	3.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.31 %
Unclassified	root	N/A	39.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.94 %
unclassified bacterial viruses	clade	All Organisms → Viruses → unclassified bacterial viruses	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	43.69 %
Unclassified	root	N/A	39.81 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	43.69 %
Unclassified	root	N/A	39.81 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	43.69 %
Unclassified	root	N/A	39.81 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	14.56 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	13.59 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	14.56 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	13.59 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	14.56 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	13.59 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	8.74 %
Sphingobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium	5.83 %
Arachidicoccus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus	1.94 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	1.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.94 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	8.74 %
unclassified Sphingobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium	5.83 %
Arachidicoccus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus rhizosphaerae	1.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.94 %
Chitinophaga eiseniae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga eiseniae	0.97 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.81 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	8.74 %
Sphingobacterium sp. SGG-5	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	5.83 %
Arachidicoccus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus rhizosphaerae	1.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.94 %
Chitinophaga eiseniae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga eiseniae	0.97 %
Bacteriophage sp.	species	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	0.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000949\|BBAY94_10037180	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1360	Open in IMG/M
3300002408\|B570J29032_109269261	Not Available	663	Open in IMG/M
3300002408\|B570J29032_109857060	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga eiseniae	1698	Open in IMG/M
3300002835\|B570J40625_100003191	Not Available	30668	Open in IMG/M
3300002835\|B570J40625_100019992	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	11361	Open in IMG/M
3300002835\|B570J40625_101122655	Not Available	663	Open in IMG/M
3300003393\|JGI25909J50240_1124092	Not Available	508	Open in IMG/M
3300004481\|Ga0069718_14958325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1133	Open in IMG/M
3300005581\|Ga0049081_10247047	Not Available	627	Open in IMG/M
3300005805\|Ga0079957_1023427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4242	Open in IMG/M
3300005805\|Ga0079957_1211001	Not Available	928	Open in IMG/M
3300005826\|Ga0074477_1182083	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300006734\|Ga0098073_1006730	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	2201	Open in IMG/M
3300006802\|Ga0070749_10056453	Not Available	2377	Open in IMG/M
3300006802\|Ga0070749_10196710	Not Available	1156	Open in IMG/M
3300006920\|Ga0070748_1064038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1441	Open in IMG/M
3300006920\|Ga0070748_1193954	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300007538\|Ga0099851_1002367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7988	Open in IMG/M
3300007542\|Ga0099846_1019655	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2629	Open in IMG/M
3300007542\|Ga0099846_1330035	Not Available	519	Open in IMG/M
3300008108\|Ga0114341_10217972	Not Available	1052	Open in IMG/M
3300008448\|Ga0114876_1001477	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	17354	Open in IMG/M
3300008448\|Ga0114876_1157354	Not Available	821	Open in IMG/M
3300008450\|Ga0114880_1070129	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus rhizosphaerae	1426	Open in IMG/M
3300008450\|Ga0114880_1109625	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1053	Open in IMG/M
3300009009\|Ga0105105_10297844	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	870	Open in IMG/M
3300009009\|Ga0105105_10742271	Not Available	588	Open in IMG/M
3300009026\|Ga0102829_1037089	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300009082\|Ga0105099_10388747	Not Available	831	Open in IMG/M
3300009085\|Ga0105103_10547430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	653	Open in IMG/M
3300009085\|Ga0105103_10626627	Not Available	613	Open in IMG/M
3300009165\|Ga0105102_10003969	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5276	Open in IMG/M
3300009165\|Ga0105102_10049388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1843	Open in IMG/M
3300009165\|Ga0105102_10336635	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	790	Open in IMG/M
3300009165\|Ga0105102_10514885	Not Available	651	Open in IMG/M
3300009165\|Ga0105102_10609162	Not Available	604	Open in IMG/M
3300009169\|Ga0105097_10146772	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1297	Open in IMG/M
3300011334\|Ga0153697_1518	Not Available	11289	Open in IMG/M
3300011336\|Ga0153703_1308	Not Available	17990	Open in IMG/M
3300012722\|Ga0157630_1048635	Not Available	981	Open in IMG/M
3300012729\|Ga0157625_1032325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	537	Open in IMG/M
3300013004\|Ga0164293_10017146	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6063	Open in IMG/M
3300013004\|Ga0164293_10041474	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	3762	Open in IMG/M
3300013372\|Ga0177922_10548667	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300017736\|Ga0181365_1050626	Not Available	1038	Open in IMG/M
3300017754\|Ga0181344_1166689	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	625	Open in IMG/M
3300017754\|Ga0181344_1237013	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300017774\|Ga0181358_1072776	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	1266	Open in IMG/M
3300017780\|Ga0181346_1014791	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3309	Open in IMG/M
3300017780\|Ga0181346_1040563	Not Available	1906	Open in IMG/M
3300017971\|Ga0180438_11104991	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	573	Open in IMG/M
3300019784\|Ga0181359_1093339	Not Available	1113	Open in IMG/M
3300020159\|Ga0211734_10731234	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	954	Open in IMG/M
3300020162\|Ga0211735_10163661	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300020190\|Ga0194118_10176818	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300020498\|Ga0208050_1018229	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	738	Open in IMG/M
3300020527\|Ga0208232_1000810	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5989	Open in IMG/M
3300020529\|Ga0208233_1036921	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	595	Open in IMG/M
3300020535\|Ga0208228_1030640	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	871	Open in IMG/M
3300020539\|Ga0207941_1016073	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1153	Open in IMG/M
3300020549\|Ga0207942_1041718	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300021092\|Ga0194122_10318647	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus rhizosphaerae	796	Open in IMG/M
3300021961\|Ga0222714_10001389	All Organisms → cellular organisms → Bacteria	27290	Open in IMG/M
3300021961\|Ga0222714_10003189	Not Available	16891	Open in IMG/M
3300022200\|Ga0196901_1072543	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1242	Open in IMG/M
3300022407\|Ga0181351_1061533	Not Available	1542	Open in IMG/M
3300022407\|Ga0181351_1122526	Not Available	973	Open in IMG/M
3300024351\|Ga0255141_1022218	Not Available	971	Open in IMG/M
3300024853\|Ga0255252_1002202	Not Available	2811	Open in IMG/M
3300025057\|Ga0208018_117415	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. SGG-5	882	Open in IMG/M
3300025635\|Ga0208147_1101208	Not Available	698	Open in IMG/M
3300025646\|Ga0208161_1007387	All Organisms → cellular organisms → Bacteria	4838	Open in IMG/M
3300025655\|Ga0208795_1087476	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	853	Open in IMG/M
3300025655\|Ga0208795_1163035	Not Available	547	Open in IMG/M
3300025747\|Ga0255247_1020168	Not Available	818	Open in IMG/M
3300025889\|Ga0208644_1228504	Not Available	786	Open in IMG/M
3300026429\|Ga0255253_1016884	All Organisms → Viruses → Predicted Viral	1157	Open in IMG/M
3300027299\|Ga0255124_1073832	Not Available	581	Open in IMG/M
3300027693\|Ga0209704_1000142	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12965	Open in IMG/M
3300027693\|Ga0209704_1005423	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300027693\|Ga0209704_1014188	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1945	Open in IMG/M
3300027693\|Ga0209704_1044744	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300027693\|Ga0209704_1123965	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	742	Open in IMG/M
3300027785\|Ga0209246_10001239	All Organisms → cellular organisms → Bacteria	10182	Open in IMG/M
3300027798\|Ga0209353_10005313	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6565	Open in IMG/M
3300028105\|Ga0255254_1002303	Not Available	2932	Open in IMG/M
3300031539\|Ga0307380_10460046	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1130	Open in IMG/M
3300031758\|Ga0315907_10001453	Not Available	31968	Open in IMG/M
3300031999\|Ga0315274_11890215	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	542	Open in IMG/M
3300032116\|Ga0315903_10773337	Not Available	706	Open in IMG/M
3300032116\|Ga0315903_10937866	Not Available	614	Open in IMG/M
3300033980\|Ga0334981_0312067	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	694	Open in IMG/M
3300033981\|Ga0334982_0246841	Not Available	860	Open in IMG/M
3300033981\|Ga0334982_0429810	Not Available	595	Open in IMG/M
3300033993\|Ga0334994_0056971	All Organisms → Viruses → unclassified bacterial viruses → Bacteriophage sp.	2415	Open in IMG/M
3300033995\|Ga0335003_0106800	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1442	Open in IMG/M
3300033996\|Ga0334979_0025358	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3979	Open in IMG/M
3300033996\|Ga0334979_0483968	Not Available	672	Open in IMG/M
3300034019\|Ga0334998_0266588	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1031	Open in IMG/M
3300034062\|Ga0334995_0224498	Not Available	1286	Open in IMG/M
3300034104\|Ga0335031_0324943	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	992	Open in IMG/M
3300034109\|Ga0335051_0004055	Not Available	8028	Open in IMG/M
3300034121\|Ga0335058_0600322	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.06%
Terrestrial	Environmental → Terrestrial	0.97%
Algae	Host-Associated → Algae	0.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	78.64%
Marine	Environmental → Aquatic → Marine	17.48%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.97%
Sediment	Environmental → Aquatic → Sediment	0.97%
Soil	Environmental → Terrestrial → Soil	0.97%
Green Algae	Host-Associated → Algae → Green Algae	0.97%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	28.16%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.30%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.50%
Coastal	Environmental → Aquatic → Marine → Coastal	12.62%
River	Environmental → Aquatic → Freshwater → River	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.91%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.94%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.97%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Clay	Environmental → Terrestrial → Soil → Clay	0.97%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.50%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.62%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	8.74%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.94%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.97%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.97%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.97%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	15.53%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	15.53%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.62%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	5.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.94%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.97%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.97%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.97%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.97%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005826	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.186_BBA	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300011336	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Paldang	Environmental	Open in IMG/M
3300012722	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES163 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012729	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020529	Freshwater microbial communities from Lake Mendota, WI - 07SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020535	Freshwater microbial communities from Lake Mendota, WI - 25JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021092	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024853	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025057	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025747	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026429	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027299	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8d	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300028105	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY94_100371804	3300000949	Macroalgal Surface	IFMIKLLIDLAPFEKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK*
B570J29032_1092692613	3300002408	Freshwater	LAPVEKGEVLSVGKTYDTYLVEKGMAVWVKVDKEKIKTK*
B570J29032_1098570604	3300002408	Freshwater	MIKLLIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWVKVDKQDYKKK*
B570J40625_10000319118	3300002835	Freshwater	MIKLLVDLAPFHKDEVISVGKTYDTYLVNKGLAIWVKMDKQEIKTK*
B570J40625_10001999210	3300002835	Freshwater	MIKLLIDLAPFQKGEILTVGKTYDTYLVDKGLAVWIKVDKQDYKKK*
B570J40625_1011226551	3300002835	Freshwater	MIKLLIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWVKVDKEKIKTK*
JGI25909J50240_11240921	3300003393	Freshwater Lake	INSIFMIKLLVDLEPFKKDEILSVGKTYDTYLVDKGLAVWIKVDKQDYKKK*
Ga0069718_149583252	3300004481	Sediment	MIKLLVDLVPFEKGEILSVGKTYDTYLVDKGLAVWIKVDKQEIKKK*
Ga0049081_102470472	3300005581	Freshwater Lentic	MIKLLVDLVPFEKGEIICVGKTYNTYLVDKGLAVWIKVEKQDFKTK*
Ga0079957_10234274	3300005805	Lake	MIKLLVDLEPFRKGEILSVGKTYDAYLVDKGLAVWIKVDKQDFEKK*
Ga0079957_12110011	3300005805	Lake	PFQKGEILTVGKTYDTYLVDKGLAVWIKVDKQEIKTK*
Ga0074477_11820834	3300005826	Sediment (Intertidal)	MVKLLVDLVPFEKGEIITVGKIYDTYLVEKGLAVWIKVQKQDFKKK*
Ga0098073_10067304	3300006734	Marine	MIKLLIDLAPFEKGEVLSVGKTYDSYLVDKGLAVWVKVNKEKIKTK*
Ga0070749_100564532	3300006802	Aqueous	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDFKKK*
Ga0070749_101967101	3300006802	Aqueous	MIKLLVDLVPFEKGEVICVGKTYNTYLVDKGLAVWIKVDKKEFKTK*
Ga0070748_10640382	3300006920	Aqueous	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDYKKK*
Ga0070748_11939542	3300006920	Aqueous	MIKLLIDLAPFEKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK*
Ga0099851_10023678	3300007538	Aqueous	MIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFKKK*
Ga0099846_10196556	3300007542	Aqueous	MIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDIQDFKKK*
Ga0099846_13300351	3300007542	Aqueous	KAFNEINSIFMIKLLVDLEPFRKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFEKK*
Ga0114341_102179723	3300008108	Freshwater, Plankton	MIKLLVDLEPFRKGEILSVGKTYDTYLVDKGLAVWIKVDKKDFEKK*
Ga0114876_100147714	3300008448	Freshwater Lake	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKFKTK*
Ga0114876_11573542	3300008448	Freshwater Lake	MIKLLTDIEPFKEGEVLSVGKTIDSYLVRKGLAVWVKVSKPQYRTK*
Ga0114880_10701293	3300008450	Freshwater Lake	MIKLLVDLVPFEKGEIICVGKTYNTYLVNKGLAVWIKVEKQDFKTK*
Ga0114880_11096252	3300008450	Freshwater Lake	MIKLLIDYQPFTKGEVLTFGKEKDAQLVEKGLAVWVKISDLNFKKK*
Ga0105105_102978442	3300009009	Freshwater Sediment	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQEIKTK*
Ga0105105_107422712	3300009009	Freshwater Sediment	MIKLLIDLAPFEKGEVLSVGKTYDTYLVDKGMAVWVKMDKEKIKTK*
Ga0102829_10370892	3300009026	Estuarine	MIKLLVDLSPFQKGEVLTVGKTYDTYLVDKGLAVWVKMNKQEIKTK*
Ga0105099_103887473	3300009082	Freshwater Sediment	IFMIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQEIKTK*
Ga0105103_105474302	3300009085	Freshwater Sediment	DLAPFMKGEVLSVGKTYDTYLVDKGMAVWVKVDKQDYKKK*
Ga0105103_106266272	3300009085	Freshwater Sediment	MIKLLIDLVPFEKGEIITVGKTYDTYLVNKGMAVWVKVDKQEIKTK*
Ga0105102_100039695	3300009165	Freshwater Sediment	LESEKTFNEINTIFMIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKVDKEKFKTK
Ga0105102_100493882	3300009165	Freshwater Sediment	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKQDYKKK*
Ga0105102_103366352	3300009165	Freshwater Sediment	MIKLLIDLAPFMKGEVLSVGKTYDTYLVEKGMAVWVKVDKEKIKTK*
Ga0105102_105148851	3300009165	Freshwater Sediment	MIKLLIDLAPFQKGEILTVGKTYDTYLVDKGLAVWVKMDKQDFKTK*
Ga0105102_106091622	3300009165	Freshwater Sediment	MIKLLVDLAPFHKGEVISVGKTYDTYLVDKGLAVWVKIDKQEIKTK*
Ga0105097_101467721	3300009169	Freshwater Sediment	MIKLLVDLEPFRKGEILSVGKTYDTYLVDKGMAVWVKVDKQDYKKK*
Ga0153697_15185	3300011334	Freshwater	MIKLLVDLEPFRKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFEKK*
Ga0153703_130831	3300011336	Freshwater	DLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFKKK*
Ga0157630_10486351	3300012722	Freshwater	KGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK*
Ga0157625_10323252	3300012729	Freshwater	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK*
Ga0164293_100171464	3300013004	Freshwater	MIKLLVDLAPFQKGEVISVGKTYDTYLVNKGLAIWVKMDKQEIKTK*
Ga0164293_100414749	3300013004	Freshwater	MIKLLIDLEPFRKGEILTVGKTYDTYLVDKGLAIWIKVDKQEIKTK*
Ga0177922_105486673	3300013372	Freshwater	MIKLLVDLEPFKKDEILSVGKTYDTYLVNNGLAVWIKMDKQDYKKK*
Ga0181365_10506264	3300017736	Freshwater Lake	VDLEPFKKDEILSVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0181344_11666892	3300017754	Freshwater Lake	MIKLLIDLAPFQKGEILTVGKTYDTYLVDKGLAVWIKVD
Ga0181344_12370132	3300017754	Freshwater Lake	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDFK
Ga0181358_10727762	3300017774	Freshwater Lake	MIKLLVDLSPFEKGEVISVGKTYDTYLVDKGLAVWVKMDKQDYKKK
Ga0181346_10147911	3300017780	Freshwater Lake	SIFMIKLLVDLSPFQKGEVLTVGKTYDTYLVDKGLAVWVKMNKQEIKTK
Ga0181346_10405635	3300017780	Freshwater Lake	IFMIKLLVDLEPFKKDEILTVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0180438_111049911	3300017971	Hypersaline Lake Sediment	MIKLLIDLAPFEKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK
Ga0181359_10933392	3300019784	Freshwater Lake	MIKLLVDLEPFKKDEILSVGKTYDTYLVNNGLAVWIKMDKQDYKKK
Ga0211734_107312342	3300020159	Freshwater	MIKLLEDLIPFEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0211735_101636612	3300020162	Freshwater	MIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFKKK
Ga0194118_101768183	3300020190	Freshwater Lake	MIKLLVDLVPFQKGEIICVGKTYNTYLVNKGLAVWIKVEKQDFKTK
Ga0208050_10182292	3300020498	Freshwater	MIKLLVDLTPFHKGEVLSVGKTYDTYLVDKGLAVWVKMDKQEIKTK
Ga0208232_10008109	3300020527	Freshwater	MIKLLVDLAPFHKDEVISVGKTYDTYLVNKGLAIWVKMDKQEIKTK
Ga0208233_10369212	3300020529	Freshwater	MIKLLIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWVKVDKQDYKKK
Ga0208228_10306402	3300020535	Freshwater	MIKLLIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWVKVDKEKIKTK
Ga0207941_10160731	3300020539	Freshwater	GIFMIKLLIDLAPFEKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK
Ga0207942_10417181	3300020549	Freshwater	MIKLLIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWV
Ga0194122_103186472	3300021092	Freshwater Lake	MIKLLVDLVPFQKGEIICVGKTYNTYLVNKGLAVWIKVEKQ
Ga0222714_1000138926	3300021961	Estuarine Water	MIKLLVDLEPFQKGEILSVGKTYDAYLVDKGLAVWIKVDKQDFKKK
Ga0222714_100031894	3300021961	Estuarine Water	MIKLLVDLEPFRKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFEKK
Ga0196901_10725432	3300022200	Aqueous	MIKLLVDLEPFKKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFEKK
Ga0181351_10615332	3300022407	Freshwater Lake	MIKLLVDLAPFQKGEVISVGKTYDTYLVDKGLAVWVKMDKQEIKKK
Ga0181351_11225261	3300022407	Freshwater Lake	TFNEINSIFMIKLLVDLEPFKKDEILSVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0255141_10222183	3300024351	Freshwater	MIKLLVDLVPFEKGEIICVGKTYNTYLVNKGLAVWIKVEKQDFKTK
Ga0255252_10022028	3300024853	Freshwater	LIPFEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0208018_1174152	3300025057	Marine	MIKLLIDLAPFEKGEVLSVGKTYDSYLVDKGLAVWVKVNKEKIKTK
Ga0208147_11012082	3300025635	Aqueous	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDFKKK
Ga0208161_10073874	3300025646	Aqueous	MIKLLIDLAPFEKGEILSVGKTYDEYLVNKGMAVWVKVDKEKIKTK
Ga0208795_10874763	3300025655	Aqueous	MIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWI
Ga0208795_11630352	3300025655	Aqueous	TFNEINTIFMIKLLVDLEPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQDFKKK
Ga0255247_10201681	3300025747	Freshwater	DLIPFEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0208644_12285042	3300025889	Aqueous	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDFKKKXARLDL
Ga0255253_10168844	3300026429	Freshwater	FEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0255124_10738322	3300027299	Freshwater	IKLLEDLIPFEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0209704_10001426	3300027693	Freshwater Sediment	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKMDKQDYKKK
Ga0209704_10054232	3300027693	Freshwater Sediment	MIKLLIDLLPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK
Ga0209704_10141882	3300027693	Freshwater Sediment	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKQDYKKK
Ga0209704_10447442	3300027693	Freshwater Sediment	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGLAVWVKVDKEKFKTK
Ga0209704_11239652	3300027693	Freshwater Sediment	MIKLLIDLIPFEKGEIITVGKTYDTYLVNKGMAVWVKVDKQEIKTK
Ga0209246_100012391	3300027785	Freshwater Lake	MIKLLVDLEPFKKDEILSVGKTYDTYLVDKGLAVW
Ga0209353_1000531310	3300027798	Freshwater Lake	MIKLLVDLEPFKKDEILSVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0255254_10023031	3300028105	Freshwater	KTFDKINSIFMIKLLEDLIPFEKGEIICVGKTYNTYLVNKGLAVWIKVDKEEIKKK
Ga0307380_104600462	3300031539	Soil	MIKLLVDLAPFEKGEVICVGKTYNTYFVDKGLAVWIKLDKQEFKKK
Ga0315907_1000145344	3300031758	Freshwater	MIKLLVDLVPFEKGEVICVGKTYNTYLVDKGLAVWIKVDKKEFKTK
Ga0315274_118902152	3300031999	Sediment	MIKLLVDLEPFKKDEILSVGKTYDTYLVEKGLAVWIKVDKQDYKKKXA
Ga0315903_107733373	3300032116	Freshwater	APFQKGEILTVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0315903_109378661	3300032116	Freshwater	MIKLLVDLVPFQKGEILSVGKTYDTYLVDKGLAVWIKVDKQEIKKK
Ga0334981_0312067_4_132	3300033980	Freshwater	LIDLAPFEKGEVLSVGKTYDTYLVEKGMAVWVKVDKEKIKTK
Ga0334982_0246841_613_753	3300033981	Freshwater	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKIKTK
Ga0334982_0429810_161_301	3300033981	Freshwater	MIKLLVDLAPFQKGEVLTVGKTYDTYLVDKGLAVWVKMDKQEIETK
Ga0334994_0056971_963_1103	3300033993	Freshwater	MIKLLVDLAPFHKGEVISVGKTYDTYLVDKGLAVWVKMDKQEIETK
Ga0335003_0106800_1039_1179	3300033995	Freshwater	MIKLLIDLEPFRKGEILTVGKTYDTYLVDKGLAIWIKVDKQEIKTK
Ga0334979_0025358_1989_2129	3300033996	Freshwater	MIKLLVDLAPFQKGEVISVGKTYDTYLVNKGLAIWVKMDKQEIETK
Ga0334979_0483968_3_131	3300033996	Freshwater	LIDLAPFQKGEILTVGKTYDTYLVDKGLAVWIKVDKQDYKKK
Ga0334998_0266588_305_445	3300034019	Freshwater	MIKLLVDLAPFMKGEVLSVGKTYDTYLVDKGMAVWVKVDKQDYKKK
Ga0334995_0224498_417_557	3300034062	Freshwater	MIKLLVDIPPFKEGEVITVGKTYDSYLVRKNLAVWVKVPRQNYRTK
Ga0335031_0324943_272_412	3300034104	Freshwater	MIKLLIDLAPFQKGEVLSVGKTYDTYLVDKGMAVWVKVDKEKFKTK
Ga0335051_0004055_1317_1457	3300034109	Freshwater	MIKLLVDLAPFHKDEVISVGKTYDTYLVDKGLAVWVKMDKQEIKTK
Ga0335058_0600322_239_379	3300034121	Freshwater	MIKLLVDLAPFHKGEVISVGKTYDTYLVDKGLAIWVKMDKQEIKTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences