NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F099145

Metagenome / Metatranscriptome Family F099145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F099145
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 52 residues
Representative Sequence MDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDWFRKKDK
Number of Associated Samples 79
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 59.80 %
% of genes near scaffold ends (potentially truncated) 33.01 %
% of genes from short scaffolds (< 2000 bps) 76.70 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (53.398 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(43.689 % of family members)
Environment Ontology (ENVO) Unclassified
(64.078 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(74.757 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.25%    β-sheet: 0.00%    Coil/Unstructured: 38.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF13385Laminin_G_3 14.56
PF05658YadA_head 14.56
PF03237Terminase_6N 1.94
PF04860Phage_portal 1.94
PF00801PKD 0.97



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A53.40 %
All OrganismsrootAll Organisms46.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10032376All Organisms → Viruses → Predicted Viral2527Open in IMG/M
3300003216|JGI26079J46598_1032041All Organisms → Viruses → Predicted Viral1191Open in IMG/M
3300004097|Ga0055584_100040165All Organisms → Viruses → Predicted Viral4605Open in IMG/M
3300004097|Ga0055584_100309235All Organisms → Viruses → Predicted Viral1623Open in IMG/M
3300005346|Ga0074242_10880391All Organisms → Viruses → Predicted Viral1829Open in IMG/M
3300005512|Ga0074648_1001939All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.19823Open in IMG/M
3300005613|Ga0074649_1045305All Organisms → Viruses → Predicted Viral1972Open in IMG/M
3300005735|Ga0076923_135579Not Available563Open in IMG/M
3300006027|Ga0075462_10000723All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.10298Open in IMG/M
3300006027|Ga0075462_10025303All Organisms → Viruses → Predicted Viral1917Open in IMG/M
3300006734|Ga0098073_1035812Not Available687Open in IMG/M
3300006752|Ga0098048_1004944Not Available5169Open in IMG/M
3300006802|Ga0070749_10190996Not Available1176Open in IMG/M
3300006802|Ga0070749_10327290Not Available855Open in IMG/M
3300006802|Ga0070749_10546296Not Available628Open in IMG/M
3300006810|Ga0070754_10098261All Organisms → Viruses → Predicted Viral1450Open in IMG/M
3300006810|Ga0070754_10120979All Organisms → Viruses → Predicted Viral1275Open in IMG/M
3300006916|Ga0070750_10140094All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300006919|Ga0070746_10027971All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3054Open in IMG/M
3300006919|Ga0070746_10320868Not Available707Open in IMG/M
3300007344|Ga0070745_1178251Not Available794Open in IMG/M
3300007346|Ga0070753_1092440All Organisms → Viruses → Predicted Viral1189Open in IMG/M
3300007346|Ga0070753_1102092All Organisms → Viruses → Predicted Viral1119Open in IMG/M
3300007538|Ga0099851_1040018All Organisms → Viruses → Predicted Viral1859Open in IMG/M
3300007540|Ga0099847_1017227Not Available2366Open in IMG/M
3300007541|Ga0099848_1006779Not Available5196Open in IMG/M
3300007541|Ga0099848_1164279Not Available815Open in IMG/M
3300007541|Ga0099848_1207362Not Available701Open in IMG/M
3300007542|Ga0099846_1022692All Organisms → Viruses → Predicted Viral2434Open in IMG/M
3300007542|Ga0099846_1191654Not Available724Open in IMG/M
3300007640|Ga0070751_1145168Not Available952Open in IMG/M
3300007640|Ga0070751_1302202Not Available596Open in IMG/M
3300009001|Ga0102963_1202474Not Available791Open in IMG/M
3300009149|Ga0114918_10106650All Organisms → Viruses → Predicted Viral1732Open in IMG/M
3300009433|Ga0115545_1083559All Organisms → Viruses → Predicted Viral1174Open in IMG/M
3300009495|Ga0115571_1179836Not Available873Open in IMG/M
3300010368|Ga0129324_10398062Not Available532Open in IMG/M
3300011118|Ga0114922_11101531Not Available643Open in IMG/M
3300016737|Ga0182047_1337513Not Available784Open in IMG/M
3300017824|Ga0181552_10053167All Organisms → Viruses → Predicted Viral2371Open in IMG/M
3300017950|Ga0181607_10106298All Organisms → Viruses → Predicted Viral1765Open in IMG/M
3300017963|Ga0180437_10127844All Organisms → Viruses → Predicted Viral2092Open in IMG/M
3300017971|Ga0180438_10332192All Organisms → Viruses → Predicted Viral1164Open in IMG/M
3300018080|Ga0180433_10967456Not Available622Open in IMG/M
3300018416|Ga0181553_10212993All Organisms → Viruses → Predicted Viral1111Open in IMG/M
3300018416|Ga0181553_10216287All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300018420|Ga0181563_10820447Not Available508Open in IMG/M
3300019459|Ga0181562_10281651All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.834Open in IMG/M
3300019937|Ga0194022_1030908Not Available705Open in IMG/M
3300020051|Ga0181555_1077195All Organisms → Viruses → Predicted Viral1554Open in IMG/M
3300021958|Ga0222718_10040104All Organisms → Viruses → Predicted Viral3051Open in IMG/M
3300021958|Ga0222718_10048196All Organisms → Viruses → Predicted Viral2725Open in IMG/M
3300021959|Ga0222716_10063989All Organisms → Viruses → Predicted Viral2571Open in IMG/M
3300021960|Ga0222715_10464445Not Available678Open in IMG/M
3300021961|Ga0222714_10001152All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.29947Open in IMG/M
3300022050|Ga0196883_1034430Not Available616Open in IMG/M
3300022057|Ga0212025_1027685Not Available945Open in IMG/M
3300022065|Ga0212024_1016986All Organisms → Viruses → Predicted Viral1157Open in IMG/M
3300022065|Ga0212024_1023287All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300022068|Ga0212021_1017023All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300022167|Ga0212020_1081436Not Available543Open in IMG/M
3300022183|Ga0196891_1075257Not Available600Open in IMG/M
3300022187|Ga0196899_1112502Not Available793Open in IMG/M
3300022198|Ga0196905_1021713All Organisms → Viruses → Predicted Viral2002Open in IMG/M
3300022198|Ga0196905_1035092Not Available1487Open in IMG/M
(restricted) 3300023210|Ga0233412_10337797Not Available669Open in IMG/M
3300024262|Ga0210003_1307608Not Available605Open in IMG/M
3300025057|Ga0208018_134467Not Available515Open in IMG/M
3300025070|Ga0208667_1001016All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.10913Open in IMG/M
3300025636|Ga0209136_1039991All Organisms → Viruses → Predicted Viral1662Open in IMG/M
3300025646|Ga0208161_1132177Not Available645Open in IMG/M
3300025646|Ga0208161_1144923Not Available599Open in IMG/M
3300025671|Ga0208898_1187069Not Available516Open in IMG/M
3300025687|Ga0208019_1086141Not Available992Open in IMG/M
3300025701|Ga0209771_1006205All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.6133Open in IMG/M
3300025769|Ga0208767_1109779All Organisms → Viruses → Predicted Viral1083Open in IMG/M
3300025769|Ga0208767_1197324Not Available680Open in IMG/M
3300025803|Ga0208425_1078767Not Available789Open in IMG/M
3300025853|Ga0208645_1096588All Organisms → Viruses → Predicted Viral1235Open in IMG/M
3300025889|Ga0208644_1070421All Organisms → Viruses → Predicted Viral1833Open in IMG/M
3300025889|Ga0208644_1352004Not Available561Open in IMG/M
3300025889|Ga0208644_1396700Not Available509Open in IMG/M
(restricted) 3300027861|Ga0233415_10007749All Organisms → Viruses → Predicted Viral4277Open in IMG/M
(restricted) 3300027861|Ga0233415_10060882All Organisms → Viruses → Predicted Viral1598Open in IMG/M
3300027917|Ga0209536_100059385All Organisms → Viruses → Predicted Viral4972Open in IMG/M
3300029293|Ga0135211_1024623Not Available695Open in IMG/M
3300029301|Ga0135222_1020071Not Available556Open in IMG/M
3300029302|Ga0135227_1003335Not Available948Open in IMG/M
3300029306|Ga0135212_1015545Not Available731Open in IMG/M
3300029308|Ga0135226_1007982Not Available771Open in IMG/M
3300029753|Ga0135224_1008645Not Available799Open in IMG/M
3300031539|Ga0307380_10225693Not Available1789Open in IMG/M
3300031565|Ga0307379_10082192All Organisms → Viruses → Predicted Viral3554Open in IMG/M
3300031565|Ga0307379_10549478All Organisms → Viruses → Predicted Viral1069Open in IMG/M
3300031578|Ga0307376_10067209Not Available2571Open in IMG/M
3300031578|Ga0307376_10457449Not Available831Open in IMG/M
3300031669|Ga0307375_10462291Not Available773Open in IMG/M
3300031673|Ga0307377_10019561Not Available6249Open in IMG/M
3300031673|Ga0307377_11148033All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage512Open in IMG/M
3300033981|Ga0334982_0162385Not Available1130Open in IMG/M
3300034122|Ga0335060_0573787Not Available571Open in IMG/M
3300034418|Ga0348337_055078All Organisms → Viruses → Predicted Viral1562Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous43.69%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.77%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil7.77%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor5.83%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.85%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.88%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface2.91%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.91%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment2.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.94%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment1.94%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.97%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.97%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.97%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.97%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.97%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.97%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.97%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300003216Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005346Saline sediment microbial community from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300005735Seawater microbial communities from Vineyard Sound, MA, USA - control T0EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006734Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300016737Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019937Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW29Aug16_MGEnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025057Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029301Marine harbor viral communities from the Indian Ocean - SRH1EnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300029308Marine harbor viral communities from the Indian Ocean - SRB2EnvironmentalOpen in IMG/M
3300029753Marine harbor viral communities from the Indian Ocean - SRH3EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300034122Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1003237623300000117MarineMDVKDTVANATTMGGIFAYLMQFQAELTLLLLITGLTLNVTRLYDWFKNKKDK*
JGI26079J46598_103204123300003216MarineMTDHKVDIANTITIGGVFSYLMQIQGELTVLLLLTGLLLNVTRLVDWFRKKKG*
Ga0055584_10004016533300004097Pelagic MarineMTDHKVDIANTITIGGVFSYLMEIQGELTVLLLLTGLLLNITRLVDWFRKKKG*
Ga0055584_10030923523300004097Pelagic MarineMDIKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK*
Ga0074242_1088039133300005346Saline Water And SedimentMEIKDTVANATTMGGIFAYLMQIQGELTVLLLLTGLLLNLTRLVDWFRKKKG*
Ga0074648_1001939113300005512Saline Water And SedimentMEIKDTVANATTMGGIFAYLMNFQGELTVLLLLTGLLLNLTRLIDWFRNKDK*
Ga0074649_104530523300005613Saline Water And SedimentMTDHKVDIANTITIGGVFSYLMEIQGELTVLLLLTGLLLNVTRLVDWFRKKKG*
Ga0076923_13557913300005735MarineMDIKDSVANTTTMTGIGMYLMNYQTELTLLLLLTGVLLNVMRIWDWFKKK*
Ga0075462_1000072333300006027AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK*
Ga0075462_1002530343300006027AqueousTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK*
Ga0098073_103581223300006734MarineLNMDTKDTIANATTMGGVFAYLMQIQGELTVLLLITGLALNITRLVDWFRKKDK*
Ga0098048_100494443300006752MarineMDSKDTIANATTMGGVFAYLMEIQGELTVLLLITGLVLNVTRIYDWFRKRKG*
Ga0070749_1019099623300006802AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDWFRKKDK*
Ga0070749_1032729013300006802AqueousDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK*
Ga0070749_1054629623300006802AqueousMMDHNVKDTIANGTTITGVAAYIMQFQAELTVLLLLTGLLLNITRLYDWFRTKK*
Ga0070754_1009826133300006810AqueousMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRNK
Ga0070754_1012097913300006810AqueousHKEYKMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKEK*
Ga0070750_1014009423300006916AqueousVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK*
Ga0070746_1002797113300006919AqueousMDTGVKDTIANTATIGGVAAYIMQFQAELTVLLLLTGLLLNITRLYDWFKGKKNG*
Ga0070746_1032086823300006919AqueousMTDHKVDLANTITIGGVFSYLMQFQGEMTMLLLLTGLALNITRLIDWFRNKKG*
Ga0070745_117825123300007344AqueousMYKMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK*
Ga0070753_109244013300007346AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDW
Ga0070753_110209213300007346AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK*
Ga0099851_104001823300007538AqueousMDVKDSVANATTLGGVFAYLMQMQGELTVLLLVTGLLLNITRLIDWFRTKKKD*
Ga0099847_101722733300007540AqueousMDTGIKDTVANTATIGGLAAYIMQFQTELTVLFLLTGLLLNITRLYDWFKGKRNG*
Ga0099848_100677933300007541AqueousMDVKDSVANATTLGGVFAYLMQMQGELTVLLLITGLLLNITRLIDWFRGKKKE*
Ga0099848_116427913300007541AqueousMTMDVKDSVANTTTITGVFAYLMNFQSELTVLLLLTGLLLNVTRLVDWFRKKDK*
Ga0099848_120736223300007541AqueousMNMSEKDIVANTTTLGGVLAYLMKFQGELTLLLLLTGLLLNLTRLYDWLKKKKTED*
Ga0099846_102269223300007542AqueousMDTGIKDTVANIATIGGLAAYIMQLQAELTVLLLLTGLILNITRLYDWFKGKK*
Ga0099846_119165413300007542AqueousMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK*
Ga0070751_109887423300007640AqueousMDIKDTTANTATIGGIFMYLMQWQAEITILVLLTGLFLNITRLYDWFKKRNDG*
Ga0070751_114516823300007640AqueousMYKMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWF
Ga0070751_130220213300007640AqueousVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK*
Ga0102963_120247423300009001Pond WaterMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDWFRKKEK*
Ga0114918_1010665023300009149Deep SubsurfaceMDNKYTIANMTTLGGVFAYLMQFQGELTVLLLLTGLILNITRLYDWFKRKKKG*
Ga0115545_108355913300009433Pelagic MarineMTDHKVDIANTITIGGVFSYLMEFQGEITVLVLLTGLTLNLLRLYDRFRKKRK*
Ga0115571_117983623300009495Pelagic MarineDHKVDIANTITIGGVFSYLMEFQGEITVLVLLTGLTLNLLRLYDRFRKKRK*
Ga0129324_1039806223300010368Freshwater To Marine Saline GradientMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLKGLLLNVTRLVDWFRKKNK*
Ga0114922_1110153123300011118Deep SubsurfaceMDVKDTVANATTMGGIFAYLMQIQGELTVLLLLTGLLLNTTRLIDWFRNKDK*
Ga0182047_133751323300016737Salt MarshDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRGKKKG
Ga0181552_1005316733300017824Salt MarshMIDHKHDIANAVTMGGVFSYLMQFQGELTVLLLLTGLLLNITRLIDWFRGKKKG
Ga0181607_1010629823300017950Salt MarshMTMDVKDSVANTATIGGVFAYLMEFQAELTVLLLLTGLLLNVTRLVDWFRKKDK
Ga0180437_1012784433300017963Hypersaline Lake SedimentMDVKDSVANATTLGGVFAYLMQMQGELTVLLLITGLLLNVTRLIDWFRGKKKE
Ga0180438_1033219213300017971Hypersaline Lake SedimentKMDVKDSVANATTLGGVFAYLMQMQGELTVLLLITGLLLNVTRLIDWFRGKKKE
Ga0180433_1096745623300018080Hypersaline Lake SedimentMTDHKVDIANTITIGGVFSYLMQFQGEMTMLLLLTGLALNITRLI
Ga0181553_1021299313300018416Salt MarshMIDHKHDIANAVTMGGVFSYLMQFQGELTVLLLLTGLLLNITRLID
Ga0181553_1021628713300018416Salt MarshMMADHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRNKKG
Ga0181563_1082044723300018420Salt MarshMMADHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLLLNITRLIDWFRNKKG
Ga0181562_1028165123300019459Salt MarshMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRNKKG
Ga0194022_103090823300019937FreshwaterMDVKDSVANTATMGGIFAYLMNFQGELTILLLMTGLLLNITRLIDWFRKKDK
Ga0181555_107719533300020051Salt MarshMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLLLNITRLIDWFRGKKKG
Ga0222718_1004010433300021958Estuarine WaterMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDW
Ga0222718_1004819633300021958Estuarine WaterMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDW
Ga0222716_1006398923300021959Estuarine WaterMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0222715_1046444513300021960Estuarine WaterNGIMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDWFRKKEK
Ga0222714_10001152303300021961Estuarine WaterMDVKDTIANTTTMGGIFAYLMNFQGELTVLLLVTGLLLNITRLVDWFRGKKKD
Ga0196883_103443023300022050AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK
Ga0212025_102768523300022057AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK
Ga0212024_101698623300022065AqueousMDVKDTVANATTMGGIFAYLMQFQAELTLLLLITGLTLNVTRLYDWFKNKKDK
Ga0212024_102328723300022065AqueousNTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0212021_101702323300022068AqueousMYKMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0212020_108143613300022167AqueousDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK
Ga0196891_107525713300022183AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0196899_111250213300022187AqueousVHNMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRNKKG
Ga0196905_102171323300022198AqueousMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFRKKDK
Ga0196905_103509223300022198AqueousMDVKDSVANATTLGGVFAYLMQMQGELTVLLLITGLLLNITRLIDWFRGKKKE
(restricted) Ga0233412_1033779713300023210SeawaterMDSKDTIANATTMGGVFAYLMEIQGELTVLLLITGLVLNFTRIYDWFRKRKG
Ga0210003_130760823300024262Deep SubsurfaceMDNKYTIANMTTLGGVFAYLMQFQGELTVLLLLTGLILNITRLYDWFKTKKKG
Ga0208018_13446723300025057MarineETKDTIANATTMGGVFAYIMQFQGELTVLLLITGLALNITRLVDWFRKKDK
Ga0208667_100101683300025070MarineMDSKDTIANATTMGGVFAYLMEIQGELTVLLLITGLVLNVTRIYDWFRKRKG
Ga0209136_103999123300025636MarineMGYNMTDHKVDLANTITIGGVFSYLMEIQGELTVLLLLTGLLLNVTRLVDWFRKKKG
Ga0208161_113217723300025646AqueousMSEKDIVANTTTLGGVLAYLMKFQGELTLLLLLTGLLLNLTRLYDWLKKKKTED
Ga0208161_114492323300025646AqueousMDTGVKDTIANTATISGVAAYIMQFQAELTVLLLLTGLILNITRIYDWFKNKK
Ga0208898_118706923300025671AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWF
Ga0208019_108614123300025687AqueousMTMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLVDWFR
Ga0209771_100620553300025701MarineMTDHKVDIANTITIGGVFSYLMQIQGELTVLLLLTGLLLNVTRLVDWFRKKKG
Ga0208767_110977923300025769AqueousTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK
Ga0208767_119732423300025769AqueousMDTGVKDTIANTATIGGLAAYIMQFQAELTVLLLLTGLILNITRIYDWFKSKK
Ga0208425_107876713300025803AqueousKRMYKMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0208645_109658813300025853AqueousMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWF
Ga0208644_107042123300025889AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLIDWFRKK
Ga0208644_135200423300025889AqueousMDVKDSVANTTTITGVFAYLMNFQAELTVLLLLTGLLLNVTRLIDWFRKKEK
Ga0208644_139670023300025889AqueousMEKDTIANATTLGAVFAYLMQFQGEITILLLLTGLALNIFRIYDRLKKGKDGEENQ
(restricted) Ga0233415_1000774933300027861SeawaterMTDHKVDIANTITIGGVFSYLMQFQGELTVLLLLTGLALNITRLIDWFRGKKKG
(restricted) Ga0233415_1006088223300027861SeawaterMTDHKVDIANTITIGGVFSYLMEIQGELTVLLLLTGLLLNVTRLVDWFRKKKG
Ga0209536_10005938583300027917Marine SedimentMEIKDTVANATTMGGIFAYLMNFQGELTVLLLLTGLLLNLTRLIDWFRKKDK
Ga0135211_102462313300029293Marine HarborMDTKDTIANATTMGGVFAYLMQIQGELTVLLLITGLALNITRLVD
Ga0135222_102007123300029301Marine HarborDTIANATTMGGVFAYLMQIQGELTVLLLITGLALNITRLVDWFRKKDK
Ga0135227_100333523300029302Marine HarborMDTKDTIANATTMGGVFAYIMQFQGELTVLLLITGLALNLTRLIDWFRKKDK
Ga0135212_101554523300029306Marine HarborMDTKDTIANATTMGGVFAYLMQIQGELTVLLLITGLALNITRLVDWFRKKDK
Ga0135226_100798213300029308Marine HarborFPVTITRGGVFAYIMQFQGELTVLLLITGLALNLTRLIDWFRKKDK
Ga0135224_100864513300029753Marine HarborNILFILVSQSRSMEVKDTVANATTMGGIFAYLMNFQGELTVLLLLTGLLLNVTRLIDWFRNKDK
Ga0307380_1022569333300031539SoilMDVKDSVANTATMGGIFAYLMNMQGELTVLLLLTGLFLNITRLIDWFRKKDK
Ga0307379_1008219243300031565SoilMDIKDSVANTTTITGVFAYLMNFQGELTVLLLLTGILLNVTRLVDWFRKKEK
Ga0307379_1054947823300031565SoilMDVKYSVANATTMGGIFAYLMQIQGELTVLLLLTGLLLNTTRLIDWFRNKDK
Ga0307376_1006720923300031578SoilMDIKDTVANTATFSGIFAYIMQFQGELTLLLLVTGLALNILRINDWFRNRKSK
Ga0307376_1045744923300031578SoilMDVKYSVANTATMGGIFAYLMHMQGELTVLLLLTGLLLNVTRLIDWFRKKDK
Ga0307375_1046229123300031669SoilMDVKYSVANTATMGGIFAYLMHMQGELTILLLITGLLLNVTRLIDWFRKKDK
Ga0307377_1001956143300031673SoilMNDHKVDIANTITIGGVFSYLMEIQGELTVLLLLTGLLLNVTRLVDWFRNKKG
Ga0307377_1114803323300031673SoilMEIKDTVANTTTFTGVGMYVMHFQTELTVLLLLTGVILNLTRIYDWYKYKKQNNE
Ga0334982_0162385_522_6803300033981FreshwaterMEVKDSVANITTMGGIMASLMSFQSELTILLILTGLLLNVTRLVDWFKKKKD
Ga0335060_0573787_425_5713300034122FreshwaterDSVANITTMGGIMASLMSFQSELTILLILTGLLLNVTRLVDWFKKKKD
Ga0348337_055078_2_1483300034418AqueousDSVANTTTITGVFAYLMNFQAELTVLLLLTGLFLNITRLVDWFRKKDK


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