Metagenome / Metatranscriptome Family F098911

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098911
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	77 residues
Representative Sequence	QYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Number of Associated Samples	82
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	92.23 %
% of genes from short scaffolds (< 2000 bps)	91.26 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.019 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.194 % of family members)
Environment Ontology (ENVO)	Unclassified (67.961 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.282 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.73% β-sheet: 2.15% Coil/Unstructured: 73.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00145	DNA_methylase	40.78
PF08401	ArdcN	1.94
PF01609	DDE_Tnp_1	0.97
PF02867	Ribonuc_red_lgC	0.97
PF02738	MoCoBD_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	40.78
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.94
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.97
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.97
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.97
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.97
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.97
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.97
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.63 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.07 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	16.50 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	16.50 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Azospirillum tabaci	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	16.50 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Azospirillum tabaci	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	16.50 %
unclassified Desulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Azospirillum tabaci	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	16.50 %
Desulfovibrio sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100338114	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005175\|Ga0066673_10785220	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005178\|Ga0066688_10805364	Not Available	587	Open in IMG/M
3300005332\|Ga0066388_104908740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	680	Open in IMG/M
3300005363\|Ga0008090_15029833	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005363\|Ga0008090_15604808	Not Available	590	Open in IMG/M
3300005518\|Ga0070699_100844814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	838	Open in IMG/M
3300005610\|Ga0070763_10057852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1861	Open in IMG/M
3300006804\|Ga0079221_11515963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	539	Open in IMG/M
3300009012\|Ga0066710_103404581	Not Available	604	Open in IMG/M
3300009143\|Ga0099792_11169478	Not Available	521	Open in IMG/M
3300010360\|Ga0126372_10474930	Not Available	1166	Open in IMG/M
3300010361\|Ga0126378_13005803	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_101863045	Not Available	868	Open in IMG/M
3300010398\|Ga0126383_13541042	Not Available	510	Open in IMG/M
3300012362\|Ga0137361_11171878	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012918\|Ga0137396_11280029	Not Available	511	Open in IMG/M
3300012923\|Ga0137359_10600199	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300016294\|Ga0182041_11305414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	664	Open in IMG/M
3300016404\|Ga0182037_10509535	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300016404\|Ga0182037_11700350	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300016422\|Ga0182039_10073076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2434	Open in IMG/M
3300016422\|Ga0182039_10799225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	837	Open in IMG/M
3300016445\|Ga0182038_10841330	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300017822\|Ga0187802_10450097	Not Available	511	Open in IMG/M
3300017928\|Ga0187806_1372749	Not Available	513	Open in IMG/M
3300018468\|Ga0066662_11333848	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300020579\|Ga0210407_11314782	Not Available	539	Open in IMG/M
3300020580\|Ga0210403_11458007	Not Available	516	Open in IMG/M
3300021170\|Ga0210400_11128979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300021441\|Ga0213871_10060278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300021476\|Ga0187846_10143126	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300021476\|Ga0187846_10262638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	716	Open in IMG/M
3300021476\|Ga0187846_10495042	Not Available	500	Open in IMG/M
3300026356\|Ga0257150_1013392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300026551\|Ga0209648_10834237	Not Available	504	Open in IMG/M
3300027824\|Ga0209040_10292818	Not Available	796	Open in IMG/M
3300031543\|Ga0318516_10272968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	977	Open in IMG/M
3300031544\|Ga0318534_10553607	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300031546\|Ga0318538_10155503	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031546\|Ga0318538_10281752	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300031679\|Ga0318561_10068670	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300031681\|Ga0318572_10710958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	598	Open in IMG/M
3300031713\|Ga0318496_10415755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	743	Open in IMG/M
3300031723\|Ga0318493_10034189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2331	Open in IMG/M
3300031723\|Ga0318493_10380966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	770	Open in IMG/M
3300031723\|Ga0318493_10452881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	706	Open in IMG/M
3300031724\|Ga0318500_10653312	Not Available	535	Open in IMG/M
3300031736\|Ga0318501_10519811	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031736\|Ga0318501_10643015	Not Available	583	Open in IMG/M
3300031744\|Ga0306918_10227967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1414	Open in IMG/M
3300031744\|Ga0306918_11038645	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031748\|Ga0318492_10210023	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300031763\|Ga0318537_10061051	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300031763\|Ga0318537_10173801	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300031765\|Ga0318554_10876490	Not Available	501	Open in IMG/M
3300031768\|Ga0318509_10573378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	629	Open in IMG/M
3300031768\|Ga0318509_10633060	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031771\|Ga0318546_10109036	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300031771\|Ga0318546_10129640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1684	Open in IMG/M
3300031771\|Ga0318546_11062550	Not Available	569	Open in IMG/M
3300031780\|Ga0318508_1149472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	662	Open in IMG/M
3300031781\|Ga0318547_10249761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	1069	Open in IMG/M
3300031781\|Ga0318547_10551453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300031792\|Ga0318529_10096348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300031793\|Ga0318548_10623653	Not Available	524	Open in IMG/M
3300031794\|Ga0318503_10219834	Not Available	616	Open in IMG/M
3300031796\|Ga0318576_10302629	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300031805\|Ga0318497_10636399	Not Available	598	Open in IMG/M
3300031832\|Ga0318499_10191185	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300031835\|Ga0318517_10355719	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031845\|Ga0318511_10383974	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300031845\|Ga0318511_10515243	Not Available	554	Open in IMG/M
3300031894\|Ga0318522_10281480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	630	Open in IMG/M
3300031896\|Ga0318551_10097078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1564	Open in IMG/M
3300031910\|Ga0306923_10737633	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300031941\|Ga0310912_10509909	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300031942\|Ga0310916_10884520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	749	Open in IMG/M
3300031946\|Ga0310910_11179568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	594	Open in IMG/M
3300031981\|Ga0318531_10567292	Not Available	514	Open in IMG/M
3300032001\|Ga0306922_10148580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2504	Open in IMG/M
3300032001\|Ga0306922_10354950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1572	Open in IMG/M
3300032025\|Ga0318507_10474094	Not Available	545	Open in IMG/M
3300032035\|Ga0310911_10848363	Not Available	527	Open in IMG/M
3300032039\|Ga0318559_10463045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	591	Open in IMG/M
3300032043\|Ga0318556_10343594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	780	Open in IMG/M
3300032043\|Ga0318556_10402557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	716	Open in IMG/M
3300032052\|Ga0318506_10020318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2420	Open in IMG/M
3300032054\|Ga0318570_10034901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2019	Open in IMG/M
3300032054\|Ga0318570_10545248	Not Available	529	Open in IMG/M
3300032059\|Ga0318533_11300625	Not Available	531	Open in IMG/M
3300032063\|Ga0318504_10348430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum tabaci	703	Open in IMG/M
3300032064\|Ga0318510_10517188	Not Available	518	Open in IMG/M
3300032066\|Ga0318514_10001801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7670	Open in IMG/M
3300032067\|Ga0318524_10544346	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032090\|Ga0318518_10018152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3059	Open in IMG/M
3300032090\|Ga0318518_10061510	Not Available	1811	Open in IMG/M
3300032180\|Ga0307471_100765962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → unclassified Desulfovibrio → Desulfovibrio sp.	1132	Open in IMG/M
3300032261\|Ga0306920_103271886	Not Available	605	Open in IMG/M
3300033289\|Ga0310914_10707240	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300033290\|Ga0318519_10750957	Not Available	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.17%
Aquatic	Environmental → Aquatic	4.85%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.26%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Cave	Environmental → Terrestrial → Cave	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_101583063	3300003368	Bog Forest Soil	IPRQFTEADPAAELRDIIERNDCGKGRALIDGDDLKRLKLMAGMRVEL*
Ga0062386_1003381141	3300004152	Bog Forest Soil	GKHDWEHSQEDPEGSRPTTIVCAVAIVSDGEWAQAVKSQYERSGLMYDGRHEFIEIPGEFTEADRAAELAEILERNDCGNGRVLIDGEDLKRLKVMAGMRVNP*
Ga0066673_107852203	3300005175	Soil	QYERSGLMYDGRHELIEIPREFTERDRLAELAEILERNDCVEGRLLIDGDDLERLKSMAGMRVDR*
Ga0066688_108053641	3300005178	Soil	DGEHDWEDAQEDYESSRPTTIISAVEIASEEEWVIATKSQYERSGLMYDGSHERIEIPREFTERDRLAELAEILERNHCGTARVLIDGDDLERLISMAGMQVDR*
Ga0066388_1049087401	3300005332	Tropical Forest Soil	LMYDGSRELIEVPPEFSEKDHPAELTGILDRNDCGQDRVLIDGDDLKRLKSIAGMGIN*
Ga0008090_150298332	3300005363	Tropical Rainforest Soil	QYERSGLMYDGSHELIEIPLEFTESNPLAELAEILERNDCGKGRVLIDGDDLERLKSMAGMGIDR*
Ga0008090_156048081	3300005363	Tropical Rainforest Soil	VSAIAIPRQEEWVFANESQYERSGLMYDGSHELIEIPREFTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN*
Ga0070699_1008448141	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IVFAIEIATEAEWATATKSQYERSRLMYDGRHELIEIPRKFTEADRTAELSEILERNDCGKGRVLIDGDDLKRLKLMAGMRVDR*
Ga0070763_100578521	3300005610	Soil	ESSRSATIVSAIEIAGEEQWAIANESQYERSGLMYDGSHELIEIPREFTERDPLAELAEILERNDCGKARVLIDGDDLTRLKSMAGMRVDR*
Ga0079221_115159631	3300006804	Agricultural Soil	RELIEIPREFTERDCLAELAEILERNDCGTARVLIDGDDLERLKSMAGMRVDR*
Ga0066710_1034045811	3300009012	Grasslands Soil	LDDGEHDWEDAQEDYESSRPTTIISAVEIASEEEWVIATKSQYERSGLMYDGRHELIEIPREFTERDRLAELAEILERNDCGKGRVLIDGDDLERFKLMAGMRVDR
Ga0099792_111694783	3300009143	Vadose Zone Soil	YDGRHEFIEIPRKITEADRAAELAEILERNDCGKGRVLIDGDDLKRLKLMAGMRVDP*
Ga0126372_104749303	3300010360	Tropical Forest Soil	MYDGRHELIEIPCEFTERDRQAELAEILERNDCGKARVLIDGDDLKRLKSMAGMRVDR*
Ga0126378_130058031	3300010361	Tropical Forest Soil	ESSRRTTIVCAIEIASEEEWVIATKSQYERSGLMYDGSRELIEIPREFSEGDHLAELAGILNRNDCGEDRVLIDGDDLERPKSMAGMRVDR*
Ga0126381_1018630452	3300010376	Tropical Forest Soil	MYDGHRELIEIPREFTEKDRLVELAEILERNDCGKGRALINGDDLKRLKSIAGMGVE*
Ga0126383_135410423	3300010398	Tropical Forest Soil	MYDGSHELIEIPREFTEKDRLADLAEILERSDCGKDRVLNDADDLKHLKS
Ga0137361_111718781	3300012362	Vadose Zone Soil	DYEGSRPTTIVFAIEIATEAEWATATKSQYERSRPMYDGRHEFIEIPRKFTEADRAAELAEILERNDCGKGRVLIDGDDLKRLKLMAGMGVDR*
Ga0137396_112800292	3300012918	Vadose Zone Soil	MYDGRHEFIDIPRKFTEADRVAELAEILERNDCGKGRVLIDGDDLKRLKLMAGVRVDP*
Ga0137359_106001993	3300012923	Vadose Zone Soil	ASEAEWATVTKSQHERSSLMYDGRHEFIEIPRTFTEADRAAELAEILERNDCGKGRVLIDGDDLKRLKLMAGTGVDR*
Ga0182041_113054143	3300016294	Soil	NESQYERSGLMYDGSHELIEIPRELTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN
Ga0182037_105095351	3300016404	Soil	TIVSAVEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0182037_117003503	3300016404	Soil	GLMYDGRHELIEIPREFTERDPLVELAEILERNDCGKARVLIDADDLKRLKSMAGMGVDR
Ga0182039_100730761	3300016422	Soil	TVSKSQHERSGLMYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0182039_107992251	3300016422	Soil	SEEEWIIANESQYERSGLMHDGRHELIEIPREFTERDPQAGLAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0182038_108413303	3300016445	Soil	SGLMYDGSHELIEIPREFTERDPLAELAEIFETNDCGTARVLIDGDDLERLKSMAGMGID
Ga0187802_104500973	3300017822	Freshwater Sediment	QWAIANESQYERSGLMYDGSHELIEIPREFTEINPLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMGIDR
Ga0187806_13727491	3300017928	Freshwater Sediment	VSAIEIVSEEEWVIATKSQYEPSGLIYNGRHELIEIPREFTERERLAELAEILERNDCGTARVLIDGDDLERLKSMAGIRVDR
Ga0066662_113338481	3300018468	Grasslands Soil	SRPTTIVSAIEIASEAEWTTAIKSQYERSGLMYDGRHEFIEIPRKFTAADRAAVLAEILERNDCGKGRVLIDGDDLKRLKLMAGKRIDR
Ga0210407_113147821	3300020579	Soil	GEHDWEDAQEDYEDSRPTTIVSAIEIANEAEWATATKSQYERSRLMYDGRHEFIEIPRKFTEADREAELAEILERNDCGKGRVLIDGDDLKRLKLMAGKRIDR
Ga0210403_114580071	3300020580	Soil	IAGEEQWAIANESQYERSGLMYDGSHELIEIPREFTESNPLAELAEILERNDCGKDRVLIDGDDLKRLKSMAGMRVDR
Ga0210400_111289793	3300021170	Soil	QYERSGLMYDGSHELIEIPREFTESNPLAELAEILERNDCGKARVLIDGDDLERLKSMAGMRVDR
Ga0213871_100602783	3300021441	Rhizosphere	DYDSSRSTKIMAAIEIASEEEWVIANESQYERCGLMYDGSHELIEIPREFSEGDRLAELAEILEHNDCGRDRVLLDGDDLKRLKSIAGMRVDR
Ga0187846_101431261	3300021476	Biofilm	DWQDAQEDYESSRPTTIVSAVEIASEEEWVIATKSQYERSGLMYDGRHELIEIPREFTESNRLAELSEILERNDCDKTRVLIDGADLKRLKSIAGMRVDR
Ga0187846_102626381	3300021476	Biofilm	ERSGLMYDGRHELIEIPREFTGRDHLAELAEILERNDCGKGRVLIDGADLKRLKSIAGMRVDR
Ga0187846_104950422	3300021476	Biofilm	CREALDDGEHDWENAREDYESSRPTTIVSAVEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGTARVLIDGDDLERLKSIAGMRVDR
Ga0257150_10133923	3300026356	Soil	EFIDIPRKFSEADRVAELAEILERNDCGKGRVLIDGDDLKRLKLMAGVRVDP
Ga0209648_108342372	3300026551	Grasslands Soil	ALDDGEHDWEDDQEDYESSRPTTIVSAIEIAGEAEWATAAKLQYERSGLMYDGRHEFIEIPRKFTEADRAAELAEILERNDCGKGRVLIDGDDLKRLKLMAGKRVDP
Ga0209040_102928182	3300027824	Bog Forest Soil	DWEDSQEDPEGSRPTTIVSAVAIVSDEEWAQAVKSQYERSGLMYDGRHEFIEIPGEFTEADRAAELAEILERNDCGNGRVLIDGEDLKRLKVMAGMRVNP
Ga0318516_102729683	3300031543	Soil	TATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318534_105536073	3300031544	Soil	QYERSSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR
Ga0318538_101555034	3300031546	Soil	SSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVD
Ga0318538_102817521	3300031546	Soil	IANESQYERSGLMYDGSHELIEIPREFTQKDPLAELAEILERSDCGKGRVLIDGDDLKRLKSIAGMGIDR
Ga0318561_100686701	3300031679	Soil	QYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318572_107109581	3300031681	Soil	GSRELIEIPREFSEKDHPAELAGILDRNDCDEDRVPIDGDDLKRLKSIAGMRVDR
Ga0318496_104157553	3300031713	Soil	HELIEIPREFTERDPLAELAEIFETNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318493_100341893	3300031723	Soil	RELIEIPREFTERDPLAELAEVLERSDCGKGRVLIDGDDLKRLKSMAGMGIDQ
Ga0318493_103809662	3300031723	Soil	SPVEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0318493_104528813	3300031723	Soil	GSQYERSGLMYDGSHELIEIPREFTERDPLAELAEIFETNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318500_106533122	3300031724	Soil	EWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0318501_105198112	3300031736	Soil	KSQHERSGLMYDGSRELIEIPREFSEKDHPAELAGILDRNDCDEDRVPIDGDDLKRLKSIAGMRVDR
Ga0318501_106430153	3300031736	Soil	GEHDWKDAQEDYESSRPTTIISAVEIASEEEWVIATKSQYERSSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR
Ga0306918_102279673	3300031744	Soil	EYDWKDAQEDYESTRPTTIVSAVEIASEEEWATATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0306918_110386452	3300031744	Soil	ATIISAVEIAGEEQWAIATKSQYERSGLMYDGRHELIEIPREFTERDPLVELAEILERNDCGKARVLIDGDDLKRLKSMAGMGIDR
Ga0318492_102100231	3300031748	Soil	SQYERSGLMYDGSHELIEIPREFTERDPLAELAEIFERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318537_100610511	3300031763	Soil	GKHDWEDAQEDYESSRPATIVSAIEIAGEEQWAIANESQYERSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318537_101738013	3300031763	Soil	EERVIATKSQYERSSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR
Ga0318554_108764901	3300031765	Soil	REALDDGEHDWENAQEDYESSRPATIISAVEIAGEEQWAIATKSQYERSGLMYDGRHELIEIPREFTERDPLVELAEILERNDCGKARVLIDGDDLKRLKSMAGMGIDR
Ga0318509_105733783	3300031768	Soil	SQYERSGLMYDGSHELIEIPCEFTERDPLAELAEILERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318509_106330601	3300031768	Soil	SGLMYDGSHELIEIPREFTQKDPLAELAEILERSDCGKGRVLIDGDDLKRLKSIAGMGID
Ga0318546_101090361	3300031771	Soil	QEDYESSRPTTIVCAIEIVSKEEWVIANESQYERSGLMYDGSHELIEIPRELTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN
Ga0318546_101296403	3300031771	Soil	ATIASAIEIAGEEEWVIANGSQYERSGLMYDGSHELIEIPREFTERDPLAELAEIFERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318546_110625502	3300031771	Soil	LDDGEHDWEDAQEDYESSRPTTIVCAIEIASEEEWVIATKSQHERSGLMYDGSRELIEIPREFSEKDHPAELVGILDRNDCGEDRVPIDGDDLKRLKSIAGMRVDR
Ga0318508_11494723	3300031780	Soil	RSGLMYDGRHGLIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318547_102497611	3300031781	Soil	QEDYESTRPTTIVSAVEIASEEEWATATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318547_105514532	3300031781	Soil	ATIVSAIEIASEEEWVIANESQYERSGLMYDGSHELIEIPREFTQKDPLAELAEILERSDCGKGRVLIDGDDLKRLKSIAGMGIDR
Ga0318529_100963482	3300031792	Soil	QYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0318548_106236531	3300031793	Soil	ANMTGAQEDYESSRPATIASAIEIAGEEEWVIANGSQYERSGLMYDGSHELIEIPREFTERDPLAELAEIFERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318503_102198343	3300031794	Soil	GEHDWEGAQEDYESSRPTTIVSAIEIASEAEWATVSKSQHERSGLMYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318576_103026293	3300031796	Soil	MTCHELIEIPRKFTERDRLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMGIDR
Ga0318497_106363991	3300031805	Soil	EALDDGQHDWEDAQEDYESSRRTTIVSAIEITSEEEWVIANESQYERSGLMYDGSHELIEIPRELTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN
Ga0318499_101564532	3300031832	Soil	IPREFTERDPLAELAEVLERSDCGKGRVLIDGDDLKRLKSMAGMGIDQ
Ga0318499_101911851	3300031832	Soil	YDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318517_103557193	3300031835	Soil	QYERSGLMYDGSHELIEIPREFTERDPLAELAEIFETNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0318511_103839743	3300031845	Soil	ERSSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR
Ga0318511_105152433	3300031845	Soil	QYERSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGKGRVLFDGDDLKRLKSMAGMGIDR
Ga0318522_102814801	3300031894	Soil	MYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318551_100970782	3300031896	Soil	MYDCRHELIEIPREFTERNRLAELAEILVRNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0306923_107376333	3300031910	Soil	RSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMGIDR
Ga0310912_105099092	3300031941	Soil	SQYERSGLMYDGSHELIEIPREFTQKDPLAELAEILERSDCGKGRVLIDGDDLKRLKSIAGMGIDR
Ga0310916_108845203	3300031942	Soil	TIVCAIEIASEEEWVIATKSQYERSTLMYDGSRELIKIPPEFSEKDHPAELAGILDRNDCGQDRVLIDGDDLKRLKSIAGMRIN
Ga0310910_111795681	3300031946	Soil	SGLMYDGSHELIEIPRELTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN
Ga0318531_105672921	3300031981	Soil	WENAQEDYESSRPATIVAAIEIAGEEQWAIANESQYERSGLMYDGSHELIEIPCEFTERDPLAELAEILERNDCGTARVLIDGDDLERLKSMAGMGIDR
Ga0306922_101485803	3300032001	Soil	RPTTIVSAVEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0306922_103549505	3300032001	Soil	SAVEIASEEEWATATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318507_104740941	3300032025	Soil	DYESTRPTTIVSAIEIASEEEWATATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0310911_108483632	3300032035	Soil	VEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0318559_104630451	3300032039	Soil	KSQHERSGLMYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318556_103435941	3300032043	Soil	TIVSAIEIASEAEWATVSKSQHERSGLMYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318556_104025572	3300032043	Soil	GRPRRLRKLATGHNRLRNRVAGEEQWAIANESQYERSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMRVDR
Ga0318506_100203181	3300032052	Soil	GKHDWEDAQEDYESSRPATIVSAIEIAGEEQWAIANESQYERSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMGIDR
Ga0318570_100349011	3300032054	Soil	HELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVDR
Ga0318570_105452481	3300032054	Soil	EWVIATKSQYERSTLMYDGSRELIEIRPAFSEKDHPAELAGILDRNDCGEDRVPIDGDDLKRLKSIAGMRVDR
Ga0318533_113006251	3300032059	Soil	SAVKIASEEEWVIATKSQYERSGLMYDGRHELIEIPREFTERDPLVELAEILERNDCGKARVLIDGDDLKRLKSMAGMGIDR
Ga0318504_103484303	3300032063	Soil	IEITSEEEWVIANESQYERSGLMYDGSHELIEIPRELTEKDRLADLAEILERSDCGKDRVLIDGDDLKHLKSIAGMGIN
Ga0318510_105171881	3300032064	Soil	TIVSAVEIASEEEWAIATKSQYERSGLMYDGRHELIEIPREFTERNRLAELAEILVRNDCGKARVLIDGDDLKRLKSIAEMGVDR
Ga0318514_100018016	3300032066	Soil	MARELIEIPREFTERDPLAELAEVLERSDCGKGRVLIDGDDLKRLKSMAGMGIDQ
Ga0318524_105443463	3300032067	Soil	SEAEWATVSKSQHERSGLMYDGRHEFIEIPRKFTEADQVGELAEILERNDCGKGRVLIDGDDLERLKSVAGMRVDR
Ga0318518_100181521	3300032090	Soil	SGLMYDGRHELIEIPREFTERNRLAELAEILERNDCGKARVLIDGDDLKRLKSIAGMGVD
Ga0318518_100615104	3300032090	Soil	MYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR
Ga0307471_1007659621	3300032180	Hardwood Forest Soil	HDWEDAQEDYESSRPTTIISAVEIASEEEWVIATKSQYERSGLMYDGSHERIEIPREFTERDRLAELDEILERNDCGKGRVLIDGDDLERLKSIAGMRVDR
Ga0306920_1032718862	3300032261	Soil	TEISSDDESATAVKSQRERSGLMYNDHHQFLEIPRQFIEADHAAELAEIIERNDCGKGRALIDGDDLRRLKLLAGMRVEP
Ga0310914_107072401	3300033289	Soil	EIAGEEQWAIANESQYERSGLMYEGSHELIEIPREFTERDPLAELAEILERNDCGKGRVLIDGDDLKRLKSMAGMGIDR
Ga0318519_107509573	3300033290	Soil	REALDDGEHDWKDAQEDYESSRPTTIISAVEIASEEEWVIATKSQYERSSLMYDGRHELIKIPREFTERDRLAELAEILERNDCAKGRVLIDGDDLKRLKSIAGMGVDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098911

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences