NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098907

Metagenome Family F098907

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098907
Family Type Metagenome
Number of Sequences 103
Average Sequence Length 46 residues
Representative Sequence MHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF
Number of Associated Samples 50
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.47 %
% of genes near scaffold ends (potentially truncated) 18.45 %
% of genes from short scaffolds (< 2000 bps) 66.02 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (40.777 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(67.961 % of family members)
Environment Ontology (ENVO) Unclassified
(77.670 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(90.291 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.35%    β-sheet: 0.00%    Coil/Unstructured: 48.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF08774VRR_NUC 11.65
PF08401ArdcN 10.68
PF03237Terminase_6N 3.88
PF04851ResIII 2.91
PF06114Peptidase_M78 2.91
PF12708Pectate_lyase_3 1.94
PF00271Helicase_C 1.94
PF00166Cpn10 1.94
PF01844HNH 1.94
PF01555N6_N4_Mtase 0.97
PF13392HNH_3 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 10.68
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.94
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.97
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.97
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.97


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.22 %
UnclassifiedrootN/A40.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000439|TBL_comb48_EPIDRAFT_1003687Not Available10132Open in IMG/M
3300002930|Water_102015Not Available3614Open in IMG/M
3300003852|Ga0031655_10265726Not Available643Open in IMG/M
3300004448|Ga0065861_1193237Not Available646Open in IMG/M
3300004807|Ga0007809_10025633All Organisms → cellular organisms → Bacteria → Proteobacteria2038Open in IMG/M
3300004807|Ga0007809_10036942Not Available1638Open in IMG/M
3300006106|Ga0007833_1102380Not Available505Open in IMG/M
3300006108|Ga0007862_1037097Not Available1031Open in IMG/M
3300006805|Ga0075464_10013201Not Available4122Open in IMG/M
3300009068|Ga0114973_10002334Not Available13823Open in IMG/M
3300009068|Ga0114973_10024812All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3683Open in IMG/M
3300009068|Ga0114973_10620949All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage553Open in IMG/M
3300009151|Ga0114962_10026385Not Available4036Open in IMG/M
3300009151|Ga0114962_10027048All Organisms → cellular organisms → Bacteria → Proteobacteria3976Open in IMG/M
3300009151|Ga0114962_10029060All Organisms → cellular organisms → Bacteria3810Open in IMG/M
3300009151|Ga0114962_10035459All Organisms → cellular organisms → Bacteria → Proteobacteria3389Open in IMG/M
3300009151|Ga0114962_10106930Not Available1734Open in IMG/M
3300009151|Ga0114962_10120598Not Available1609Open in IMG/M
3300009151|Ga0114962_10130417All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1531Open in IMG/M
3300009151|Ga0114962_10181717All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300009151|Ga0114962_10713487All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage512Open in IMG/M
3300009154|Ga0114963_10059769All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2408Open in IMG/M
3300009154|Ga0114963_10324014Not Available852Open in IMG/M
3300009155|Ga0114968_10099342All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1781Open in IMG/M
3300009155|Ga0114968_10139551Not Available1447Open in IMG/M
3300009155|Ga0114968_10411297Not Available737Open in IMG/M
3300009155|Ga0114968_10428714All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage718Open in IMG/M
3300009158|Ga0114977_10316463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales886Open in IMG/M
3300009159|Ga0114978_10092820All Organisms → cellular organisms → Bacteria2002Open in IMG/M
3300009161|Ga0114966_10027247All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4253Open in IMG/M
3300009164|Ga0114975_10579680All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage600Open in IMG/M
3300009181|Ga0114969_10146175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1489Open in IMG/M
3300009181|Ga0114969_10782728Not Available507Open in IMG/M
3300009182|Ga0114959_10101194All Organisms → cellular organisms → Bacteria1580Open in IMG/M
3300009182|Ga0114959_10280199All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas thiooxydans837Open in IMG/M
3300009182|Ga0114959_10369976All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage705Open in IMG/M
3300009684|Ga0114958_10258933All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales858Open in IMG/M
3300010157|Ga0114964_10488293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33579Open in IMG/M
3300010157|Ga0114964_10617641All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage508Open in IMG/M
3300010158|Ga0114960_10011256Not Available6095Open in IMG/M
3300010158|Ga0114960_10154862All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1229Open in IMG/M
3300010158|Ga0114960_10370431All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage705Open in IMG/M
3300010160|Ga0114967_10176313All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1167Open in IMG/M
3300010160|Ga0114967_10190649All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1109Open in IMG/M
3300010160|Ga0114967_10267099Not Available890Open in IMG/M
3300010233|Ga0136235_1004026Not Available5008Open in IMG/M
3300010885|Ga0133913_10236643All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4853Open in IMG/M
3300010885|Ga0133913_10381393All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3727Open in IMG/M
3300010885|Ga0133913_10557520Not Available3013Open in IMG/M
3300010885|Ga0133913_10643967Not Available2779Open in IMG/M
3300010885|Ga0133913_11197334All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1948Open in IMG/M
3300010885|Ga0133913_11328261All Organisms → cellular organisms → Bacteria1834Open in IMG/M
3300010885|Ga0133913_11336036All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1828Open in IMG/M
3300010885|Ga0133913_11447489All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1744Open in IMG/M
3300010885|Ga0133913_13065690Not Available1111Open in IMG/M
3300010885|Ga0133913_13313808All Organisms → Viruses → Predicted Viral1059Open in IMG/M
3300010885|Ga0133913_13511631All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1022Open in IMG/M
3300013285|Ga0136642_1004860All Organisms → Viruses4664Open in IMG/M
3300013285|Ga0136642_1007508All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3546Open in IMG/M
3300013285|Ga0136642_1011420Not Available2743Open in IMG/M
3300013285|Ga0136642_1032502All Organisms → cellular organisms → Bacteria1480Open in IMG/M
3300013285|Ga0136642_1051792Not Available1121Open in IMG/M
3300013286|Ga0136641_1095877All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage828Open in IMG/M
3300015050|Ga0181338_1004903All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2274Open in IMG/M
3300020686|Ga0214194_110051Not Available846Open in IMG/M
3300020716|Ga0214207_1010829All Organisms → Viruses → Predicted Viral1208Open in IMG/M
3300025382|Ga0208256_1007867Not Available1755Open in IMG/M
3300025382|Ga0208256_1010632All Organisms → cellular organisms → Bacteria → Proteobacteria1469Open in IMG/M
3300025387|Ga0207959_1000577Not Available9085Open in IMG/M
3300025387|Ga0207959_1010436Not Available1657Open in IMG/M
3300025595|Ga0208248_1037979Not Available1113Open in IMG/M
3300025896|Ga0208916_10181315All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage909Open in IMG/M
3300027708|Ga0209188_1004612Not Available9051Open in IMG/M
3300027708|Ga0209188_1010778Not Available5192Open in IMG/M
3300027708|Ga0209188_1021340All Organisms → cellular organisms → Bacteria → Proteobacteria3302Open in IMG/M
3300027708|Ga0209188_1070637Not Available1479Open in IMG/M
3300027712|Ga0209499_1000293Not Available37168Open in IMG/M
3300027712|Ga0209499_1050197All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1720Open in IMG/M
3300027712|Ga0209499_1147991All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales859Open in IMG/M
3300027733|Ga0209297_1268900All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales647Open in IMG/M
3300027741|Ga0209085_1000205All Organisms → cellular organisms → Bacteria45850Open in IMG/M
3300027741|Ga0209085_1003957Not Available8020Open in IMG/M
3300027741|Ga0209085_1053517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS331862Open in IMG/M
3300027741|Ga0209085_1059025All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1759Open in IMG/M
3300027746|Ga0209597_1000272Not Available34293Open in IMG/M
3300027749|Ga0209084_1006144Not Available7961Open in IMG/M
3300027749|Ga0209084_1197565All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales811Open in IMG/M
3300027754|Ga0209596_1106331All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300027763|Ga0209088_10276006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage689Open in IMG/M
3300027764|Ga0209134_10345296All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage502Open in IMG/M
3300027770|Ga0209086_10154319All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1106Open in IMG/M
3300027777|Ga0209829_10003001Not Available12509Open in IMG/M
3300027777|Ga0209829_10274142All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales699Open in IMG/M
3300027777|Ga0209829_10328834Not Available614Open in IMG/M
3300027785|Ga0209246_10026347All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2196Open in IMG/M
3300027808|Ga0209354_10008051Not Available4223Open in IMG/M
3300027896|Ga0209777_10160772All Organisms → cellular organisms → Bacteria1842Open in IMG/M
3300027896|Ga0209777_10197297All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1621Open in IMG/M
3300027896|Ga0209777_10257571Not Available1369Open in IMG/M
3300027896|Ga0209777_10991801Not Available575Open in IMG/M
3300027963|Ga0209400_1075750All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1638Open in IMG/M
3300027969|Ga0209191_1365881All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage517Open in IMG/M
3300031999|Ga0315274_11782260Not Available566Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake67.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater8.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.83%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment4.85%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake3.88%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.91%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.94%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.97%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.97%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.97%
Estuary WaterEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water0.97%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000439Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)EnvironmentalOpen in IMG/M
3300002930Estuary water microbial communities from Pearl Estuary, Zhujiang, ChinaEnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004807Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07EnvironmentalOpen in IMG/M
3300006106Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07EnvironmentalOpen in IMG/M
3300006108Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009684Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaGEnvironmentalOpen in IMG/M
3300010157Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010233Filterable freshwater microbial communities from Conwy River, North Wales, UK. Fraction, filtered through 0.2 um filter. After WGA.EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300013285Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31YEnvironmentalOpen in IMG/M
3300013286Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23YEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300020686Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnionEnvironmentalOpen in IMG/M
3300020716Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnionEnvironmentalOpen in IMG/M
3300025382Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)EnvironmentalOpen in IMG/M
3300025387Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300025595Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027746Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027777Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027963Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
TBL_comb48_EPIDRAFT_1003687123300000439FreshwaterMHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALAYFDILTF*
Water_10201543300002930Estuary WaterMKYTYSPSREAIEKRRAAVMDLLTVLAIAGALTVLALAYFDILTF*
Ga0031655_1026572623300003852Freshwater Lake SedimentLTYKENIMHKYTYSPSREQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF*
Ga0065861_119323723300004448MarineMPDYTYSPSQEAFEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF*
Ga0007809_1002563353300004807FreshwaterMHRYTYSPSQEQVERRRAAMMDFLAVLIYSAALTLLALDYFDILTF*
Ga0007809_1003694243300004807FreshwaterMHRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF*
Ga0007833_110238023300006106FreshwaterMHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALDYFDILTF*
Ga0007862_103709723300006108FreshwaterMHRYTYSPSQEQIERRRAAMMDFFAVLVYSAALTLLALDYFNILTF*
Ga0075464_1001320113300006805AqueousMHRYTYKPTQEALEKRRQAAMDFFAVLIYAAGLTLCALAYFDILTF*
Ga0114973_10002334103300009068Freshwater LakeMKYTYSPSREAIEKRRAAAMDLLTVLAIAGALTVLALAYFDILTF*
Ga0114973_1002481253300009068Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAGLTLLGLAYFDILTF*
Ga0114973_1062094913300009068Freshwater LakeMHHHYTYSPSQEALEKRRAVAMDMLAVLAIAAGLTLLGLAYFDILTF*
Ga0114962_1002638583300009151Freshwater LakeMHRYTYSPSQEALEKRRAAAMDLLAVLAYSIGLTLLLLAWFDVLTF*
Ga0114962_1002704843300009151Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF*
Ga0114962_1002906023300009151Freshwater LakeMHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF*
Ga0114962_1003545943300009151Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLVIAAGLTLLGLAYFDILTF*
Ga0114962_1010693023300009151Freshwater LakeMHRYTYKPSQEALEKRRAAAMDFFAVLVYAAALTALALAYFDILTF*
Ga0114962_1012059823300009151Freshwater LakeMHRYTYKPTQEALEKRRAAAMDILAVLAYAAALTVCALAYFDILTF*
Ga0114962_1013041753300009151Freshwater LakeMKYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF*
Ga0114962_1018171733300009151Freshwater LakeMKYTYSPSQEKMEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF*
Ga0114962_1071348713300009151Freshwater LakeLEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF*
Ga0114963_1005976943300009154Freshwater LakeMQVLIMHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF*
Ga0114963_1032401413300009154Freshwater LakeMHRYTYKPTQEALEKRRQAAMDMLAVLVYAAALTALALAYFDILTF*
Ga0114968_1009934233300009155Freshwater LakeMHRYTYKPTQEALEKRRAAAMDMLAVLAYSVALTVCALAYFDILTF*
Ga0114968_1013955153300009155Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF*
Ga0114968_1041129723300009155Freshwater LakeMKYTYSPSREAIEKRRAAAVDFLTVLAIAGALTVLALAYFDILL*
Ga0114968_1042871433300009155Freshwater LakeMHHHYTYKPTQEALEKRRAAAMDMLAVLAIAAAITLLGLAYFDILTF*
Ga0114977_1031646323300009158Freshwater LakeMRHHYTYSPSQEALEKRRAAAMDLLAVLAIAGALTVLALAYFDILF*
Ga0114978_1009282013300009159Freshwater LakeMKYTYSPSQEKIEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF*
Ga0114966_1002724773300009161Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF*
Ga0114975_1057968023300009164Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLTVLAIAAGLTLLGLAYFDILTF*
Ga0114969_1014617533300009181Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGL
Ga0114969_1078272813300009181Freshwater LakeREAIEKRRAAAMDFLTVLAISGALTVLALAYFDILTF*
Ga0114959_1010119433300009182Freshwater LakeMHRYTYSPSQEALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF*
Ga0114959_1028019913300009182Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGL
Ga0114959_1036997623300009182Freshwater LakeMHRYTYKPTQEALEKRRAAAMDMLAVLAIAAALTVLALAYFDILTF*
Ga0114958_1025893323300009684Freshwater LakeMHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF*
Ga0114964_1048829313300010157Freshwater LakeLLQGVNIMHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF*
Ga0114964_1061764113300010157Freshwater LakeLTGEPTMHRYTYKPTQEALEKRRAAAMDVLAILAYAAGLTVCALAYFDILTF*
Ga0114960_1001125613300010158Freshwater LakeEALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF*
Ga0114960_1015486233300010158Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF*
Ga0114960_1037043113300010158Freshwater LakeYKPTQEALEKRRAAAMDMLAVLAIAAALTVLALAYFDILTF*
Ga0114967_1017631353300010160Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAAFTLLGLAYFDILTF*
Ga0114967_1019064933300010160Freshwater LakeMKYTYSPSREAIEKRRAAAMDFLTVLAISGALTVLALAYFDILTF*
Ga0114967_1026709933300010160Freshwater LakeHHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF*
Ga0136235_100402643300010233FreshwaterMKYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF*
Ga0133913_1023664363300010885Freshwater LakeMKYTYSPSREAIEKRRAAAMDFLAVLVIAAGLTLLGLAYFDILTF*
Ga0133913_1038139323300010885Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF*
Ga0133913_1055752053300010885Freshwater LakeMHRYTYSPSQEALEKRRAAAMDILAVLAYSISLTLLLLAWFDVLTF*
Ga0133913_1064396743300010885Freshwater LakeMHHHYTYSPSREAIEKRRAAAMDLLTILAIAAGLTLLGLAYFDILTF*
Ga0133913_1119733423300010885Freshwater LakeMHRYTYKPTQEALEKRRQAAMDFFAVLVYAAALTALALAYFDILTF*
Ga0133913_1132826113300010885Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGLA
Ga0133913_1133603613300010885Freshwater LakeKEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF*
Ga0133913_1144748933300010885Freshwater LakeMHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF*
Ga0133913_1306569023300010885Freshwater LakeMHRYTYSPSQEALEKRRAAAMDMLAVLFIAAGLTLLGLAYFDILTF*
Ga0133913_1331380853300010885Freshwater LakeMHRYTYKPTQEALEKRRAAAMDMLAVLVYAAALTALALAYFDILTF*
Ga0133913_1351163143300010885Freshwater LakeMHRYTYSPSQEAIEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF*
Ga0136642_100486043300013285FreshwaterMRHHYTYSPSQEALEKRRAAAMDMLAVLAYSVALTLLLLAWFDIITF*
Ga0136642_100750883300013285FreshwaterQEALEKRRAAAMDILAVLAYSVALTLLLLAYFDILTF*
Ga0136642_101142063300013285FreshwaterMRHHYTYSPSQEALEKRRAAAMDMLAVLACSIGLTLLLLAYFDILTF*
Ga0136642_103250243300013285FreshwaterMRHHYTYSPSQEALEKRRAAAMDILAVLAYSVALTLLLLAYFDILTF*
Ga0136642_105179253300013285FreshwaterRHHYTYSPSQEALEKRRAAAMDILAVLACSIGLTLLLLAYFDILTF*
Ga0136641_109587723300013286FreshwaterMKYTYSPSQEKMEKRRAAAMDFLAVLAYSAGLTLLGLAYFDILTF*
Ga0181338_100490353300015050Freshwater LakeMHRYTYKPTQEALERRRAAAMDFFAVLVYAAGLTLCALAYFDILTF*
Ga0214194_11005113300020686FreshwaterMHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALAYFDILTF
Ga0214207_101082923300020716FreshwaterMHRYTYSPSQEQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF
Ga0208256_100786723300025382FreshwaterMHRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF
Ga0208256_101063223300025382FreshwaterMHRYTYSPSQEQVERRRAAMMDFLAVLIYSAALTVCALAYFDILTF
Ga0207959_100057723300025387FreshwaterMHRYTYKPSQEALEKRRAAAMDMIAVLIYSVALTVCALDYFDILTF
Ga0207959_101043653300025387FreshwaterHRYTYSPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF
Ga0208248_103797943300025595FreshwaterMKYTYSPSREAIEKRRAAAMDFLTVLAIAGALTVLALAYFDILTF
Ga0208916_1018131513300025896AqueousMHRYTYKPTQEALEKRRQAAMDFFAVLIYAAGLTLCALAYFDILTF
Ga0209188_100461243300027708Freshwater LakeMHRYTYSPSQEALEKRRAAAMDLLAVLAYSIGLTLLLLAWFDVLTF
Ga0209188_1010778103300027708Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLA
Ga0209188_102134053300027708Freshwater LakeMHRYTYSPSQEALEKRRAAAMDILAVLAYSVALTVLALAYFDILTF
Ga0209188_107063753300027708Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF
Ga0209499_1000293323300027712Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDMLAVLAIAAGLTLLGLAYFDILTF
Ga0209499_105019743300027712Freshwater LakeMKYTYSPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF
Ga0209499_114799133300027712Freshwater LakeMHRYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLALAYFDILTF
Ga0209297_126890023300027733Freshwater LakeMRHHYTYSPSQEALEKRRAAAMDLLAVLAIAGALTVLALAYFDILF
Ga0209085_1000205323300027741Freshwater LakeMKYTYSPSREAIEKRRAAAMDLLTVLAIAGALTVLALAYFDILTF
Ga0209085_100395783300027741Freshwater LakeMHRYTYKPTQEALEKRRAAAMDILAVLAYAAALTVCALAYFDILTF
Ga0209085_105351723300027741Freshwater LakeMHRYTYKPSQEALEKRRAAAMDFFAVLVYAAALTALALAYFDILTF
Ga0209085_105902543300027741Freshwater LakeMHRYTYSPSQEALEKRRAAAMDMLAVLAYSVALTVLALAYFDILTF
Ga0209597_1000272433300027746Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLAVLAIAAGLTLLGLAYFDILTF
Ga0209084_100614493300027749Freshwater LakeMHRYTYSPSQEALEKRRAAAMDLLAVLAYSISLTLLLLAWFDVLTF
Ga0209084_119756533300027749Freshwater LakeMKYTYSPSQEKMEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF
Ga0209596_110633143300027754Freshwater LakeMHHHYTYKPSQEALEKRRAAAMDILAVLAIAAGLTLLGLAYFDILTF
Ga0209088_1027600633300027763Freshwater LakeMRYTYSPSREAIEKRRAAAMDFLTVVAIAGALTVLALAYFDILTF
Ga0209134_1034529613300027764Freshwater LakeMHRYTYKPTQEALERRRAAAMDFFAVLVYAAGLTLCALAYFDILTF
Ga0209086_1015431923300027770Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDFLAVLAYSAVLTVCALAYFDILTF
Ga0209829_10003001143300027777Freshwater LakeMHRYTYSPSQEALEKRRAAAMDILAVLAYSISLTLLLLAWFDVLTF
Ga0209829_1027414233300027777Freshwater LakeMKYTYSPSQEALEKRRAAAMDMLAVLAIAAALTLLGLAYFDILTF
Ga0209829_1032883423300027777Freshwater LakeMHRYTYKPTQEALEKRRQAAMDFFAVLVYAAALTALALAYFDILTF
Ga0209246_1002634743300027785Freshwater LakeMHRYTYKPTQESLEKRRQAAMDFFAVLVYAAGLTLCALAYFDILTF
Ga0209354_1000805183300027808Freshwater LakeMHRYTYKPTQEALEKRRQAAMDFFAVLVYAAGLTLCALAYF
Ga0209777_1016077233300027896Freshwater Lake SedimentMHRYTYKPSQEALEKRRAAAMDMIAVLIYSAALTLLALDYFDILTF
Ga0209777_1019729713300027896Freshwater Lake SedimentPSQEQVERRRAAAMDMIAVLIYSVALTVCALAYFDILTF
Ga0209777_1025757113300027896Freshwater Lake SedimentSLNILAYKENIMHKYTYSPSQEQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF
Ga0209777_1099180123300027896Freshwater Lake SedimentMHKYTYSPSREQVERRRAAMMDFFAVLVYSAALTLLALDYFDILTF
Ga0209400_107575063300027963Freshwater LakeMHRYTYKPTQEALEKRRAAAMDMLAVLAYSVALTVCALAYFDILTF
Ga0209191_136588123300027969Freshwater LakeMHHHYTYSPSQEALEKRRAAAMDLLTVLAIAAGLTLLGLAYFDILTF
Ga0315274_1178226023300031999SedimentMHHHYTYKPSQEALEKRRAAAMDLLAVLAIAAALTLLGLAYFDILTF


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