NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098881

Metagenome / Metatranscriptome Family F098881

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098881
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 105 residues
Representative Sequence SGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTVDDVIAPGKRDAWVARCLSTELTRVNAKR
Number of Associated Samples 97
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.71 %
% of genes near scaffold ends (potentially truncated) 79.61 %
% of genes from short scaffolds (< 2000 bps) 89.32 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.029 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.709 % of family members)
Environment Ontology (ENVO) Unclassified
(26.214 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.864 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130
1GPICI_01557410
2JGI11643J12802_101908061
3JGI10220J13317_122399802
4Ga0055439_100251993
5Ga0063356_1055597212
6Ga0058862_123278652
7Ga0068993_100037451
8Ga0065712_101296342
9Ga0065705_100708912
10Ga0070683_1012585722
11Ga0070666_110240272
12Ga0070708_1011587581
13Ga0070708_1017058891
14Ga0070662_1014534542
15Ga0070681_110306081
16Ga0070707_1005785401
17Ga0070697_1017840721
18Ga0070697_1021334571
19Ga0070696_1010276851
20Ga0070704_1001285311
21Ga0068854_1013809992
22Ga0066905_1000200381
23Ga0075298_10005503
24Ga0075298_10219191
25Ga0075024_1001598743
26Ga0079220_120160722
27Ga0079219_107315471
28Ga0105106_101652363
29Ga0114129_101967752
30Ga0105243_115973152
31Ga0075423_115348492
32Ga0126374_107190832
33Ga0105065_10276962
34Ga0105067_11063992
35Ga0105064_10327422
36Ga0126377_100625093
37Ga0126377_109476873
38Ga0136847_129694422
39Ga0134124_102410473
40Ga0105246_105494961
41Ga0137458_11935101
42Ga0137434_10105921
43Ga0137375_111646432
44Ga0137360_117730622
45Ga0137361_118217691
46Ga0157295_100387632
47Ga0137395_101050783
48Ga0137419_103492403
49Ga0153915_104929193
50Ga0164300_100382683
51Ga0164302_102411142
52Ga0164304_105667502
53Ga0157371_102331013
54Ga0180066_10059973
55Ga0180063_10188872
56Ga0180063_11270322
57Ga0157379_106721312
58Ga0132258_100203374
59Ga0132255_1041283022
60Ga0184634_103367873
61Ga0187788_100831843
62Ga0184638_10605781
63Ga0184621_102134262
64Ga0193722_11237811
65Ga0193734_10392942
66Ga0180118_10195701
67Ga0210378_104039802
68Ga0224452_10322733
69Ga0224452_12848182
70Ga0222623_100712121
71Ga0210094_10602871
72Ga0210139_10620061
73Ga0207680_101140512
74Ga0207707_110013632
75Ga0207660_107064292
76Ga0207652_104153401
77Ga0207701_112390481
78Ga0207711_102374341
79Ga0207661_101147502
80Ga0208775_10221242
81Ga0208285_10132452
82Ga0207639_121549851
83Ga0207674_116023421
84Ga0209438_10401153
85Ga0257180_10165601
86Ga0257178_10025293
87Ga0256867_100230871
88Ga0207467_10238901
89Ga0207538_10063931
90Ga0209984_10715951
91Ga0209843_10784602
92Ga0209726_104536722
93Ga0209705_105601571
94Ga0209526_100489003
95Ga0307287_102482982
96Ga0307312_112062031
97Ga0299907_101144752
98Ga0307469_124728351
99Ga0307478_115317722
100Ga0307470_100111491
101Ga0364930_0272731_165_524
102Ga0326723_0065567_238_597
103Ga0370498_018668_548_907
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 80.77%    β-sheet: 0.00%    Coil/Unstructured: 19.23%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100SGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTVDDVIAPGKRDAWVARCLSTELTRVNAKRExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Freshwater Sediment
Freshwater Wetlands
Groundwater
Natural And Restored Wetlands
Soil
Groundwater Sediment
Watersheds
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Hardwood Forest Soil
Untreated Peat Soil
Rice Paddy Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Groundwater Sand
Peat Soil
Sediment
Host-Associated
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Thaliana Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
3.9%4.9%2.9%2.9%9.7%4.9%2.9%2.9%2.9%3.9%6.8%5.8%3.9%2.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICI_015574102088090015SoilVEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR
JGI11643J12802_1019080613300000890SoilERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
JGI10220J13317_1223998023300001139SoilERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR*
Ga0055439_1002519933300004019Natural And Restored WetlandsFLIMVVGAALSVVVVAVRWDVERGRTVRMLQTDLQMAQARERCWEALARFTPRTADDVIAPAKRDAWVARCLSTELTRVNATR*
Ga0063356_10555972123300004463Arabidopsis Thaliana RhizosphereGLVARPAPGGAVEIVRHVNGPVEVKVSGLVDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR*
Ga0058862_1232786523300004803Host-AssociatedVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0068993_1000374513300005183Natural And Restored WetlandsRQWQGVAAVLFLIMVVGAALSVVVVAVRWDVERGRTVRMLQTDLQMAQARERCWEALARFTPRTADDVIAPAKRDAWVARCLSTELTRVNATR*
Ga0065712_1012963423300005290Miscanthus RhizosphereSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0065705_1007089123300005294Switchgrass RhizosphereGVAAVLFLIMVVGAALAVVVVAVRWDIERGRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLSTELTRVNAKR*
Ga0070683_10125857223300005329Corn RhizosphereNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0070666_1102402723300005335Switchgrass RhizosphereFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0070708_10115875813300005445Corn, Switchgrass And Miscanthus RhizosphereDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEVARARERCWEALVRYTPRGPEDVVTPARRDGWIGRCLATELGRVNARK*
Ga0070708_10170588913300005445Corn, Switchgrass And Miscanthus RhizosphereVDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYAPRGPEDVVTPARRDGWIGRCLATELGRVNARK*
Ga0070662_10145345423300005457Corn RhizosphereQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR*
Ga0070681_1103060813300005458Corn RhizosphereRHAGGPVEVKISGLVDAAERRIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR*
Ga0070707_10057854013300005468Corn, Switchgrass And Miscanthus RhizosphereMLFIIMVVGAALAVVVVALRWDYERGRAVAVLQADLDIARARERCWEALARYTPRAADDVIIPARRDGWIARCLTAELGRVNAKK*
Ga0070697_10178407213300005536Corn, Switchgrass And Miscanthus RhizosphereLVDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYAPRGPEDVVTPARRDGWIGRCLATELGRVNARK*
Ga0070697_10213345713300005536Corn, Switchgrass And Miscanthus RhizosphereLFIVMVVGAALAVVVVALRWDYERGRAVRVLQADLEIARARERCWEALARYTPRGADDVITPARRDGWIARCLTTELGRVNTRK*
Ga0070696_10102768513300005546Corn, Switchgrass And Miscanthus RhizosphereQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR*
Ga0070704_10012853113300005549Corn, Switchgrass And Miscanthus RhizosphereVEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0068854_10138099923300005578Corn RhizosphereAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR*
Ga0066905_10002003813300005713Tropical Forest SoilAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVITPAKRDGWVARCTSAELDRVNAKR*
Ga0075298_100055033300005880Rice Paddy SoilSGLIDTAERQIRQWQGVAAALFLIMVVGAALAVVVVAMRWDYERGRTLQILRADLQMAQAREHCWEALAQFTPRGSDDVVTPDRRDAWVARCLSTELQRVNARR*
Ga0075298_102191913300005880Rice Paddy SoilMVVGAALAVVVVALRWDYERGRAVRVLQADLEIARARERCWEALARYTPRGTDDVITSARRDGWIARCLTAELGRVNTRK*
Ga0075024_10015987433300006047WatershedsLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEIARARERCWEALVRYTPRGAEDIVTPARRDGWIGRCLATELGRVNARK*
Ga0079220_1201607223300006806Agricultural SoilRRLRQWQGVAALLFIIMVVGAALAVVVVALRWDFARARSVRVLQADLEMARARERCWEALARYTPRGADDVITPARRDGWIARCLSAELGRVSVRR*
Ga0079219_1073154713300006954Agricultural SoilVEIVRHPNGPLEVKVCGLVDSAERRLRQWQGVAALLFIIMVVGAALAVVVVALRWDFARARSVRVLQADLEMARARERCWEALARYTPRGADDVITPARRDGWIARCLSAELGRVSVRR*
Ga0105106_1016523633300009078Freshwater SedimentVEVIRHAGGPVEVKISGLVDAAERRIRQWQGVAAMLFLIMVVGAALAVVVVAVRWDAARSRTVRVLRADLQMAQARERCWEALARFTPRTTDDVVAPGKRDAWVARCLSTELTRVNAKR*
Ga0114129_1019677523300009147Populus RhizosphereVEIVRHANGPLEVRVSGLVDSAERRIRQWQGVAMMLFIIMVVGAALAVVVVALRWDYERGRAVAVLQADLDIARARERCWEALARYTPRAADDVIIPARRDGWIARCLTAELGRVNAKK*
Ga0105243_1159731523300009148Miscanthus RhizosphereVEVKVSGLIDSAERRIRQWQGVAAILFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEIARARERCWEALVRYTPRGPEDVVTPARRDGWIGRCLATE
Ga0075423_1153484923300009162Populus RhizosphereVEIVRHANGPLEVKVSGLVDRAERRIRQWQGVAAMLFIIMVVGAALAVVVVALRWDYERGRAVAVLQADLDIARARERCWEALARYTPRAADDVIIPARRDGWIARCLTAELGRVNAKK*
Ga0126374_1071908323300009792Tropical Forest SoilRRIRQWQGVAAMLFLIMVVGAALAVVVVALRWDAARGRAVQVLQADLETARAREKCWEALARYSPRGPDDVIIPARRDAWVARCLSTELARVNGKR*
Ga0105065_102769623300009803Groundwater SandKVSGLVDTAERRIRQWQSVAAALFLIMVVGAALAVVVVALRWDYERGRSVRVLQADLQMARAREKCWEALARYTPRGPEDVITPAKRDGWVARCLSTEFGRLNGK*
Ga0105067_110639923300009812Groundwater SandSGLVDAAERRIRQWQGVAAFLFLIMVVGAALAVVVVAVRWDAERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLTTELSRANTKR*
Ga0105064_103274223300009821Groundwater SandVEIVRHPNGPVEVKVSGLVDTAERRIRQWQGVAASLFLIMVVGAALAVVVVALRWDYERGRSVQVLQADLQMARAREKCWEALARYTPRAAEDVITPAKRDGWVARCLSIELGRVNGK*
Ga0126377_1006250933300010362Tropical Forest SoilVEILRHVNGPVEVKVSGLIDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALVRFSPRNSDDVITPAKRDGWIARCTSAELDRVNAKR*
Ga0126377_1094768733300010362Tropical Forest SoilVEIVRHINGPVEVKVSGLIDGAERRIRQWQGVAASLFLIMVLGAALAIVVVALRWDYERGRALQVLQADLQMARARERCWEALARFSPRSAEDVITPAKRDGWVARCTSAELERLNAKR*
Ga0136847_1296944223300010391Freshwater SedimentLVDAAERRIRQWQGVAAFLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQTDLQMAQARERCWEALARYTPRTADDVIAPGKRDAWVARCLSTELTRVNAKR*
Ga0134124_1024104733300010397Terrestrial SoilAERRIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR*
Ga0105246_1054949613300011119Miscanthus RhizosphereVEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRLNARR*
Ga0137458_119351013300011436SoilRRAVEIIRHAGGPIEVKISGLVDAAERRIRQWQGVAAFLFILMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVVTPGKRDAWVARCLNTELTRVNAKR*
Ga0137434_101059213300012225SoilRGAVEVVRHAGGQVEVKISGLVDAAERRIRQWQGVAAFLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQAREHCWEALARFTPRTNDDVIAPAKRDAWVARCLTTELSRVNAKR*
Ga0137375_1116464323300012360Vadose Zone SoilSGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTVDDVIAPGKRDAWVARCLSTELTRVNAKR*
Ga0137360_1177306223300012361Vadose Zone SoilHADGPLEVKVSGLIDSAERRIRRWQGVAAMLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEVARARERCWEALVRYTPRGAEDVVTPARRDGWIGRCLATELGRVNARK*
Ga0137361_1182176913300012362Vadose Zone SoilKLSGLIDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYTPRGAEDVVTPARRDGWIGRCLATELGRVNARK*
Ga0157295_1003876323300012906SoilVEIVRHVNGPVEVKVSGLVDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR*
Ga0137395_1010507833300012917Vadose Zone SoilGVAAMLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEIARARERCWEALVRYTPRGPEDVVMPARRDGWIGRCLATELGRVNARK*
Ga0137419_1034924033300012925Vadose Zone SoilAEHRIRQWHGVAAVLFLIMVVGAALAVVVVAVRWDIERGRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLSTELTRVNAKR*
Ga0153915_1049291933300012931Freshwater WetlandsVEIVRHANGPVEVKVSGLIDSAERRIRQWQGVAAILFILMVVGAALAVVVVALRWDYERGRAVRVLQADLEIARARERCWEALARYTPRGADDVITPVRRDGWIARCLTTELGRVSPRK*
Ga0164300_1003826833300012951SoilVEIVRHPNGPLEVKLSRLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR*
Ga0164302_1024111423300012961SoilVEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTQRGPEDVITPARRDGWIARCLTAQLSRVHARR*
Ga0164304_1056675023300012986SoilGPVEVKVSGLIDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYERGRSVAVLQADLEIARARERCWEALVRYTPRGPEDVVTPARRDGWIGRCLATELGRVNARQ*
Ga0157371_1023310133300013102Corn RhizosphereEVKVSGLVDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR*
Ga0180066_100599733300014873SoilVEVVRHAGGSVEVKLSGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQAREHCWEALARFTPRTTDDMIAPAKRDAWVARCLTTELSRVNARR*
Ga0180063_101888723300014885SoilVEVVRHAGGSVEVKLSGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALASFTPRTIDDVIAPAKREAWVARCLTTELSRVNARR*
Ga0180063_112703223300014885SoilVEIIRHAGGPIEVKISGLVDAAERRIRQWQGVAAFLFILMVVGAALAVVVVAVRWDAERSRTVRVLRTDLQMAQARERCWEALARFTPRSADDVITPGKRDAWVARCLNTELSRVNAKR*
Ga0157379_1067213123300014968Switchgrass RhizosphereVEIIRHAGGPVEVKISGLVDAAERRIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTEL
Ga0132258_1002033743300015371Arabidopsis RhizosphereVEIVRHLNGPVEVKVSGLIDAAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALVRFSPRNSDDVITPAKRDGWIARCTSAELDRVNAKR*
Ga0132255_10412830223300015374Arabidopsis RhizosphereVMVVGAALAVVVVALRWDYERGRAVRVLQADLEIARARERCWGALARYTPRGADDVITPARRDGWIARCLTTELGRVSVRR*
Ga0184634_1033678733300018031Groundwater SedimentVDTAERRIRQWQGVAAALFLIMVVGAALAVVVVALRWDYERGRSLQVLQADLQMARAREKCWEALARYTPRAAEDVITPAKRDAWVARCLSTELGRVNGKR
Ga0187788_1008318433300018032Tropical PeatlandVRPARSAVEIVRHPDGPVEVKVSGLVDGAERRIRQWQGVAAALFLIMVVGAALSFVVIALRWDYERARTMQMLQADLQMARARERCWETLARFIPRSAEDVIPPGKRDGWVARCTSAELERVNAKR
Ga0184638_106057813300018052Groundwater SedimentVRHAGGQVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQTDLQMAQARERCWEALARFTPRSADDVIAPAKREAWVARCLTTELSRVNAKR
Ga0184621_1021342623300018054Groundwater SedimentPRRGAVEVVRHAGGSVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDIERSRTVRVLQADLQMAQAREHCWEALARFTPRTAEDVIAPAKRDAWVARCLSTELTRVNAKR
Ga0193722_112378113300019877SoilDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEIARARERCWEALVRYTPRGPEDVVTPARRDGWIGRCLATELGRVNARK
Ga0193734_103929423300020015SoilKVSGLVDSAERRIRQWQGVAAMLFIVMVVGAALAVVVVALRWDYERGRAVAVLQADLEIARARERCWEALVRYTPRGPEDVVTPARRDGWIGRCLATELGRVNARK
Ga0180118_101957013300020063Groundwater SedimentEVVRHAGGQVEVKISGLVDAAERRIRQWQGVAAFLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALASFTPRTIDDVIAPAKREAWVARCLTTELSRVNARR
Ga0210378_1040398023300021073Groundwater SedimentRRGAVEVVRHAGGQVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQAREHCWEALARFTPRTAEDVIAPAKREAWVARCLTTELSRVNAKR
Ga0224452_103227333300022534Groundwater SedimentVLFLIMVVGAALAVVVVAVRWDIERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLSTELTRVNAKR
Ga0224452_128481823300022534Groundwater SedimentVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQAREHCWEALARFTPRTADDVIAPAKREAWVARCLTTELSRVNVKR
Ga0222623_1007121213300022694Groundwater SedimentDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQTDLQMAQAREHCWEALARFTPRTADDVIAPAKREAWVARCLTTELSRVNAKR
Ga0210094_106028713300025549Natural And Restored WetlandsMVVGAALSVVVVAVRWDVERGRTVRMLQTDLQMAQARERCWEALARFTPRTADDVIAPAKRDAWVARCLSTELTRVNATR
Ga0210139_106200613300025558Natural And Restored WetlandsLFLIMVVGAALSVVVVAVRWDVERGRTVRMLQTDLQMAQARERCWEALARFTPRTADDVIAPAKRDAWVARCLSTELTRVNATR
Ga0207680_1011405123300025903Switchgrass RhizosphereAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR
Ga0207707_1100136323300025912Corn RhizosphereAVEVVRHEGGPVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR
Ga0207660_1070642923300025917Corn RhizosphereGAVEVVRHEGGPVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRSVRVLQADLQMAQARERCWEALARFTPRTVDDVIVPAKRDAWVARCLTTELSRVNTK
Ga0207652_1041534013300025921Corn RhizosphereLFLLMVVGAALAVVVVAVRWDVERSRSVRVLQADLQMAQARERCWEALARFTPRTVDDVIVPAKRDAWVARCLTTELSRVNTKR
Ga0207701_1123904813300025930Corn, Switchgrass And Miscanthus RhizospherePSAVEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR
Ga0207711_1023743413300025941Switchgrass RhizosphereEIVRHPNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR
Ga0207661_1011475023300025944Corn RhizosphereNGPLEVKLSGLVDSAERRLRQWQGVAAILFIIMVVGAALAVVVVALRWDFERGRSVQVLKADLEMARARERCWEALVRYTPRGPEDVITPARRDGWIARCLTAELSRVNARR
Ga0208775_102212423300025992Rice Paddy SoilIVRHADGPVEVKVSGLIDSAERRIRQWQGVAAILFIVMVVGAALAVVVVALRWDYERGRAVRVLQADLEIARARERCWEALARYTPRGSDDVITPARRDGWIARCLTAELGRVNTRK
Ga0208285_101324523300026005Rice Paddy SoilVEVKVSGLIDSAERRIRQWQGVAAILFIVMVVGAALAVVVVALRWDYERGRAARVLQADLEIARARERCWEALARYTPRGADDVITPARRDGWIARCLTTELGRVNTRK
Ga0207639_1215498513300026041Corn RhizosphereGLVDAAERRIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR
Ga0207674_1160234213300026116Corn RhizosphereEVKISGLVDAAERRIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARYTPRTADDVIAPGKRDAWIGRCLNTELSRVNAKR
Ga0209438_104011533300026285Grasslands SoilVMVVGAALAVVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYTPRGAEDVVTPARRDGWIGRCLATEIGRVNARK
Ga0257180_101656013300026354SoilANGPVEVKLSGLIDSAERRIRQWQGVAAMLFIVMVVGAALAAVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYTPRGAEDVVTPARRDGWIGRCLATELGRVNARK
Ga0257178_100252933300026446SoilLFIVMVVGAALAVVVVALRWDYARGRAVAVLQADLEIARARERCWEALVRYTPRGAEDVVTPARRDGWIGRCLATELGRVNARK
Ga0256867_1002308713300026535SoilAALLFLIMVVGAALAVVVVAVRWDAERSRTLRVLQADLQMAQARERCWEALALFSPRTIDDVIAPAKREAWVARCLSTELSRVNGKR
Ga0207467_102389013300027036SoilAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR
Ga0207538_100639313300027122SoilRPAPGGAVEIVRHVNGPVEVKVSGLVDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR
Ga0209984_107159513300027424Arabidopsis Thaliana RhizosphereVNGPVEVKVSGLVDGAERRIRQWQGVAASLFLIMVVGAALAIVVVALRWDYERGRAMQVLQTDLQMARARERCWEALARFTPRTADDVVTPARRDGWVARCTSTELDRVNAKR
Ga0209843_107846023300027511Groundwater SandARPGRAAVEIVRHPNGPVEVKVSGLVDTAERRIRQWQGVAASLFLIMVVGAALAVVVVALRWDYERGRSVQVLQADLQMARAREKCWEALARYTPRAAEDVITPAKRDGWVARCLSIELGRVNGK
Ga0209726_1045367223300027815GroundwaterHAGGQVEVKISGLVDAAERRIRQWQGVAAVLFLIMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALASFTPRTTDDVIAPAKRDAWVARCLTTELSRVNAKR
Ga0209705_1056015713300027979Freshwater SedimentILMVVGAALAVVVVAVRWDAARSRTVRVLRADLQMAQARERCWEALARFTPRTTDDVVAPGKRDAWVARCLSTELTRVNAKR
Ga0209526_1004890033300028047Forest SoilRQWQGVAAMLFIIMVVGAALAVVVVALRWDYERGRAVAVLQADLDIARARERCWEALARYTPRAADDVIIPARRDGWIARCLTAELGRVNAKK
Ga0307287_1024829823300028796SoilIMVVGAALAVVVVAVRWDIERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLSTELTRVNAKR
Ga0307312_1120620313300028828SoilAERRIRQWQGVAAVLFLIMVVGAALAVVAVAVRWDIERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVIAPGKRDAWVARCLSTELTRVNAKR
Ga0299907_1011447523300030006SoilDAAERRIRQWQGVAALLFLIMVVGAALAVVVVAVRWDAERSRTLRVLQADLQMAQARERCWEALALFSPRTIDDVIAPAKREAWVARCLSTELSRVNGKR
Ga0307469_1247283513300031720Hardwood Forest SoilIRQWQGVAAMLFIIMVVGAALAVVVVALRWDYERGRAVAVLRADLDIARARERCWEALALYTPRAVDDVITPARRDGWIARCLTAELGRVNAKK
Ga0307478_1153177223300031823Hardwood Forest SoilIRQWQGVAAVLFLLMVVGAALAVVVVAVRWDYERGRSVQMLQADLQTARARERCWEALARYTPRGADDVIAPGRRDAWVARCLTTELGRVNAKR
Ga0307470_1001114913300032174Hardwood Forest SoilRHAGGPVEVKISGLVDAAERRIRQWQGVAAFLFLIMVVGAALAVVVVAVRWDIERSRTVRVLQADLQMAQARERCWEALARFTPRSADDVVTPAKRDAWVARCLTTELTRVNAKR
Ga0364930_0272731_165_5243300033814SedimentVEIVRHADGPVEVKVSGLVDTAERRIRQWQGVAAALFLIMVVGAALAVVVVALRWDYERGRSVQVLQADLQMARVRERCWEALARYTPRAAEDVITPAKRDAWVARCLSAELGRVNGKR
Ga0326723_0065567_238_5973300034090Peat SoilVEIVRHANGPVEVKVSGLIDSAERRIRQWQGVAAILFIVMVVGAALAVVVVALRWDFERGRAVRVLQADLEIARARERCWEALVRYTPRGADDVITPARRDGWIARCLTTELGRVSTRK
Ga0370498_018668_548_9073300034155Untreated Peat SoilVEIIRHAGGPVEVKISGLVDAAERRIRQWQGVAAFLFILMVVGAALAVVVVAVRWDVERSRTVRVLQADLQMAQARERCWEALARFTPRTTDDVVTPGKRDAWVARCLNTELTRVNAKR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.