Metagenome / Metatranscriptome Family F098637

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098637
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	103 residues
Representative Sequence	MNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSNPSHHKFNGKVMTSPPYCYWTQGDKKVLVTEVTHTSVPTQRQVANGDICVGQVDKYWGRSYSRL
Number of Associated Samples	64
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.85 %
% of genes near scaffold ends (potentially truncated)	33.01 %
% of genes from short scaffolds (< 2000 bps)	66.02 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.117 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (25.243 % of family members)
Environment Ontology (ENVO)	Unclassified (72.816 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (80.583 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.72% β-sheet: 28.91% Coil/Unstructured: 59.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01381	HTH_3	1.94
PF13639	zf-RING_2	0.97
PF05050	Methyltransf_21	0.97
PF00388	PI-PLC-X	0.97
PF03798	TRAM_LAG1_CLN8	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
All Organisms	root	All Organisms	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Viruses	superkingdom	All Organisms → Viruses	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003430\|JGI25921J50272_10025575	Not Available	1524	Open in IMG/M
3300003430\|JGI25921J50272_10030550	Not Available	1342	Open in IMG/M
3300003430\|JGI25921J50272_10126418	Not Available	536	Open in IMG/M
3300004112\|Ga0065166_10004743	Not Available	3318	Open in IMG/M
3300004112\|Ga0065166_10228002	Not Available	742	Open in IMG/M
3300004240\|Ga0007787_10302904	Not Available	790	Open in IMG/M
3300004240\|Ga0007787_10311539	Not Available	779	Open in IMG/M
3300004240\|Ga0007787_10715086	Not Available	500	Open in IMG/M
3300005517\|Ga0070374_10422515	Not Available	669	Open in IMG/M
3300005662\|Ga0078894_10002415	Not Available	14160	Open in IMG/M
3300005662\|Ga0078894_10054329	Not Available	3406	Open in IMG/M
3300005662\|Ga0078894_10134737	Not Available	2208	Open in IMG/M
3300005662\|Ga0078894_10203598	Not Available	1792	Open in IMG/M
3300005662\|Ga0078894_10204022	Not Available	1790	Open in IMG/M
3300005662\|Ga0078894_10286064	Not Available	1496	Open in IMG/M
3300005662\|Ga0078894_10372333	All Organisms → Viruses → Predicted Viral	1292	Open in IMG/M
3300008107\|Ga0114340_1059488	Not Available	1644	Open in IMG/M
3300008107\|Ga0114340_1210459	Not Available	640	Open in IMG/M
3300008113\|Ga0114346_1032655	Not Available	2715	Open in IMG/M
3300008113\|Ga0114346_1053698	Not Available	1998	Open in IMG/M
3300008117\|Ga0114351_1042352	Not Available	2895	Open in IMG/M
3300008261\|Ga0114336_1007683	Not Available	7811	Open in IMG/M
3300008261\|Ga0114336_1199645	Not Available	841	Open in IMG/M
3300008262\|Ga0114337_1074690	Not Available	2965	Open in IMG/M
3300008962\|Ga0104242_1090466	Not Available	507	Open in IMG/M
3300009160\|Ga0114981_10024957	Not Available	3430	Open in IMG/M
3300009160\|Ga0114981_10542602	Not Available	620	Open in IMG/M
3300009163\|Ga0114970_10136364	Not Available	1487	Open in IMG/M
3300009183\|Ga0114974_10007961	Not Available	7772	Open in IMG/M
3300009183\|Ga0114974_10536290	Not Available	652	Open in IMG/M
3300010354\|Ga0129333_10088255	Not Available	2869	Open in IMG/M
3300010354\|Ga0129333_10833516	Not Available	784	Open in IMG/M
3300010354\|Ga0129333_11092268	Not Available	667	Open in IMG/M
3300010354\|Ga0129333_11335611	Not Available	591	Open in IMG/M
3300010370\|Ga0129336_10068999	Not Available	2094	Open in IMG/M
3300010885\|Ga0133913_10014298	Not Available	21037	Open in IMG/M
3300010885\|Ga0133913_10745525	Not Available	2558	Open in IMG/M
3300010885\|Ga0133913_11189447	Not Available	1956	Open in IMG/M
3300012000\|Ga0119951_1002220	Not Available	10853	Open in IMG/M
3300012970\|Ga0129338_1232271	Not Available	662	Open in IMG/M
3300013004\|Ga0164293_10035345	Not Available	4123	Open in IMG/M
3300013087\|Ga0163212_1178628	Not Available	667	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10035991	Not Available	4608	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10009004	Not Available	13047	Open in IMG/M
3300020074\|Ga0194113_10358155	Not Available	1085	Open in IMG/M
3300020109\|Ga0194112_10294465	Not Available	1234	Open in IMG/M
3300020160\|Ga0211733_10768904	Not Available	782	Open in IMG/M
3300020179\|Ga0194134_10213049	Not Available	820	Open in IMG/M
3300020179\|Ga0194134_10266163	Not Available	694	Open in IMG/M
3300020190\|Ga0194118_10031050	Not Available	3790	Open in IMG/M
3300020190\|Ga0194118_10095234	Not Available	1838	Open in IMG/M
3300020190\|Ga0194118_10461967	Not Available	622	Open in IMG/M
3300020196\|Ga0194124_10021527	Not Available	4555	Open in IMG/M
3300020196\|Ga0194124_10422858	Not Available	603	Open in IMG/M
3300020196\|Ga0194124_10442446	Not Available	583	Open in IMG/M
3300020197\|Ga0194128_10173671	All Organisms → Viruses → Predicted Viral	1194	Open in IMG/M
3300020198\|Ga0194120_10176764	Not Available	1221	Open in IMG/M
3300020200\|Ga0194121_10404092	Not Available	676	Open in IMG/M
3300020204\|Ga0194116_10161101	Not Available	1330	Open in IMG/M
3300020204\|Ga0194116_10249016	Not Available	972	Open in IMG/M
3300020214\|Ga0194132_10028379	Not Available	5146	Open in IMG/M
3300020214\|Ga0194132_10072862	Not Available	2364	Open in IMG/M
3300020214\|Ga0194132_10155207	Not Available	1353	Open in IMG/M
3300020221\|Ga0194127_10224919	Not Available	1303	Open in IMG/M
3300020222\|Ga0194125_10238003	Not Available	1261	Open in IMG/M
3300020578\|Ga0194129_10087489	Not Available	2172	Open in IMG/M
3300020578\|Ga0194129_10089074	Not Available	2145	Open in IMG/M
3300021091\|Ga0194133_10040188	Not Available	4175	Open in IMG/M
3300021091\|Ga0194133_10162551	Not Available	1565	Open in IMG/M
3300021091\|Ga0194133_10385239	Not Available	788	Open in IMG/M
3300021091\|Ga0194133_10439931	Not Available	704	Open in IMG/M
3300023174\|Ga0214921_10029280	Not Available	5461	Open in IMG/M
3300024280\|Ga0255209_1000131	Not Available	33141	Open in IMG/M
3300024280\|Ga0255209_1011146	All Organisms → Viruses → Predicted Viral	1510	Open in IMG/M
3300024280\|Ga0255209_1031588	Not Available	824	Open in IMG/M
3300024311\|Ga0255211_1002296	Not Available	5123	Open in IMG/M
3300024311\|Ga0255211_1003900	Not Available	3557	Open in IMG/M
3300024358\|Ga0255173_1011298	All Organisms → Viruses → Predicted Viral	1621	Open in IMG/M
3300024551\|Ga0255302_1102130	Not Available	534	Open in IMG/M
3300024555\|Ga0255280_1036662	Not Available	1019	Open in IMG/M
3300027306\|Ga0255220_1005345	Not Available	3213	Open in IMG/M
3300027492\|Ga0255093_1098060	Not Available	539	Open in IMG/M
3300027769\|Ga0209770_10009265	Not Available	4515	Open in IMG/M
3300027769\|Ga0209770_10304055	Not Available	607	Open in IMG/M
3300027770\|Ga0209086_10058126	Not Available	2132	Open in IMG/M
3300027804\|Ga0209358_10102126	Not Available	1591	Open in IMG/M
3300027969\|Ga0209191_1211667	Not Available	757	Open in IMG/M
3300027974\|Ga0209299_1269439	Not Available	602	Open in IMG/M
3300028027\|Ga0247722_10000991	Not Available	16201	Open in IMG/M
3300028103\|Ga0255172_1080053	Not Available	586	Open in IMG/M
3300031951\|Ga0315904_11452541	Not Available	508	Open in IMG/M
3300032050\|Ga0315906_10965916	Not Available	645	Open in IMG/M
3300032050\|Ga0315906_11035760	Not Available	613	Open in IMG/M
3300034018\|Ga0334985_0407121	Not Available	813	Open in IMG/M
3300034021\|Ga0335004_0005472	Not Available	9425	Open in IMG/M
3300034021\|Ga0335004_0604642	Not Available	580	Open in IMG/M
3300034061\|Ga0334987_0325295	Not Available	1007	Open in IMG/M
3300034062\|Ga0334995_0568492	Not Available	666	Open in IMG/M
3300034066\|Ga0335019_0189876	Not Available	1334	Open in IMG/M
3300034102\|Ga0335029_0514722	Not Available	691	Open in IMG/M
3300034105\|Ga0335035_0332443	Not Available	885	Open in IMG/M
3300034116\|Ga0335068_0000074	Not Available	89766	Open in IMG/M
3300034284\|Ga0335013_0678531	Not Available	591	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.03%
Terrestrial	Environmental → Terrestrial	0.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	93.20%
Marine	Environmental → Aquatic → Marine	5.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.97%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	61.17%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.45%
River	Environmental → Aquatic → Freshwater → River	10.68%
Coastal	Environmental → Aquatic → Marine → Coastal	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	61.17%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	18.45%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	10.68%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.91%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	25.24%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.45%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.56%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	10.68%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.77%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.91%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.97%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020214	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m	Environmental	Open in IMG/M
3300020221	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024280	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8d	Environmental	Open in IMG/M
3300024311	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepB_8d	Environmental	Open in IMG/M
3300024358	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8d	Environmental	Open in IMG/M
3300024551	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024555	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027306	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8d	Environmental	Open in IMG/M
3300027492	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8d	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028103	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8d	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25921J50272_100255751	3300003430	Freshwater Lake	MTIIKRPTTERRMMTPTSTPIPEDTSEYYGWFSEALQQLRISHTSTHKFNGKILESPPYTYWTIYGGADGAKVLVTEVTHTSVPTQRQVANGDICVGRVDKYWGRSYTRLR*
JGI25921J50272_100305502	3300003430	Freshwater Lake	LIRIDNILYYYYQDNNKRIRTMTSYPLPHTPPSTPYPEDTTTFFGWYSEAAQQMRVSNPSHHKFNGKVMVSPPYCYWTQGEHKVLVTEVTHTSIPTARQVANGDICVGQLDKYWGRTYSRL*
JGI25921J50272_101264181	3300003430	Freshwater Lake	VILIKLIDNNTIILLSNERTTTTITMTSRTGSILPPTPPSTPFPENTSEYYGWFSEALQQLRVSNPTSHNYAGKIIQGPPYAYWTQGDKKVLITEVTHTSIPSARQVANGDICVGRVDKYWGRSYTRLD*
Ga0065166_100047433	3300004112	Freshwater Lake	MSRSLSSHGPLPSTPPSTPYPEDTSVFFGWYSEAAQQLMVNNPSHHKINGKVIMRPPYCYWLQGDKKVLITEVTHSSIPTPRQVANGDVCVGQVDKYIGRTYSRL*
Ga0065166_102280021	3300004112	Freshwater Lake	MTSRNGMITPPSTPYPEDTSEYHGWFSPAQQQLRISHPTEHVVAGKIITSPPYTYWIQGARKVLVTEITHTSIPTPRQVKNGDIYLGKLDKYWGRSYTQLGDTNLKTE*
Ga0007787_103029042	3300004240	Freshwater Lake	MNTSASASTRVCPPAPPSTPFPEDTTEYYGWFSEAAQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDRYVGREY
Ga0007787_103115391	3300004240	Freshwater Lake	NISIYYYQRINKESSNEGMSFPNCPPAPPSTPLPDQTELYFGWFSEAQQSMRVSHPSTHRYNGKTMTSPPYCYWIQGDKKILVTEITHSSLPTARQVKNGDIYLGQVDKYWGRSYTRLGVEVVTTTTGK*
Ga0007787_107150861	3300004240	Freshwater Lake	MSRSLSNHGLPATPPSTPYPEDTSVFFGWYSEAEQQLMVSNPSYHKFNGKVITRPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVCVGQLDKYIGRMYSRL*
Ga0070374_104225152	3300005517	Freshwater Lake	VYFGWYSEAAQQLRVAYPSQHKYNGKLVTSPPYCYWLQGDKKILVTEVTHTSIPTPRQLANGDICVGQVDKYFRRSEFRL*
Ga0078894_1000241510	3300005662	Freshwater Lake	MTTTPPSTPFPEDTNEYHGWYSEALQQLRVSNPSHHKFNGKIMVSPPYCYWTQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRHGVLNLKNE*
Ga0078894_100543291	3300005662	Freshwater Lake	MITPPSTPYPEDTSEYHGWFSPAQQQLRISHPTEHVVAGKIITSPPYTYWIQGARKVLVTEITHTSIPTPRQVKNGDIYLGKLDKY
Ga0078894_101347372	3300005662	Freshwater Lake	MNAPPSTPFPEDTSVFYGWYSEAAQQLRVLHPSEHLYNGKIITRPPYCYWIQGNKKVLVTEVTHTDIPTAAQKKNGDISLGKLDKYWGRAYSRL*
Ga0078894_102035981	3300005662	Freshwater Lake	MTSYPLPHTPPSTPYPEDTTTFFGWYSEAAQQMRVSNPSHHKFNGKVMVSPPYCYWTQGEHKVLVTEVTHTSIPTARQVANGDICVGQLDKYWGRTYSRL*
Ga0078894_102040222	3300005662	Freshwater Lake	MNTHVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSEPSHHKFNGKVMKSPPYCYWLQGDKKVLVTEVSHTSIPTPRQVANGDVCVGQVDKYWGRTYSRL*
Ga0078894_102860642	3300005662	Freshwater Lake	MSTSGIPITPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSQHQLHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL*
Ga0078894_103723333	3300005662	Freshwater Lake	MTNTPPSTPFPEDTSEYHGWYSEALQQLRLSYPSRHKFNGKLMVSPPYTYWTQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRLGVLNLKNE*
Ga0114340_10594882	3300008107	Freshwater, Plankton	MSTSGIPNTPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSEYRFHGKMLTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL*
Ga0114340_12104591	3300008107	Freshwater, Plankton	DMNTKCGVIAPPSTPFPEDTSEYHGWFSEAHQQLRVSNPSNHKFNGKIMKSPPYCYWMQGDRKVLVTEVTHTSIPTPRQVANGDIYVGRLDKYVGRSYNRM*
Ga0114346_10326551	3300008113	Freshwater, Plankton	MTTKFCPPAPPSTPFPEDTSEYHGWYSEAQQRLRVLHPSQHKFKGKNITGPPYSYWMQRDKKVLVTEVTHTSIPTPRQVANGDIY
Ga0114346_10536982	3300008113	Freshwater, Plankton	MNTDMNTKCGVIAPPSTPFPEDTSEYHGWFSEAHQQLRVSNPSNHKFNGKIMKSPPYCYWMQGDRKVLVTEVTHTSIPTPRQVANGDIYVGRLDKYVGRSYNRM*
Ga0114351_10423521	3300008117	Freshwater, Plankton	VNIIIKQTNKRLKTTMTTSCPPAPPSTPYPEDSTLFFGWYSEAAQQLRLANPSQHKFNGKIIISPPYCYWIQRDKKVLVTEVTHTSIPTPRQVKNGDICIGQLDKYFGRTYSRL*
Ga0114336_10076833	3300008261	Freshwater, Plankton	MTTVQPPAPPSTPVPDDSSMYFGWFSEAQQQLRVSHPTKHLLNGKIIQSPPYTYWTQGDRKVLVTEVTHSSLPTPRQIKNGDIYLGQIDKYCGRSYTRLPEIIEKKDKTKPKTE*
Ga0114336_11996452	3300008261	Freshwater, Plankton	MNTHVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSEPSHHKFNGKVITSPPYCYWLQGDKKVLVTEVSHTSIPTPRQVANGDVCVGQVDKYWGRTYSRL*
Ga0114337_10746902	3300008262	Freshwater, Plankton	MSTSGIPITPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSEYRFHGKMLTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL*
Ga0104242_10904662	3300008962	Freshwater	RPPSTPYPEDTNEYHGWYLHAQQVMRVSHPSSHKFNGKIMVSPPYCYWTQGDRKVLVTEVSHTSIPTPRQVANGDIYLGRVDKYWGRSYTRLAETS*
Ga0114981_100249572	3300009160	Freshwater Lake	MSRSLSNHGLPATPPSTPYPEDTSVFFGWYSEAEQQLMVSNPSYHKFNGKIITRPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVCVGQLDKYIGRMYSRL*
Ga0114981_105426022	3300009160	Freshwater Lake	PSTPFPEDTTEYYGWFSEATQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDKYVGREYTRLAEK*
Ga0114970_101363641	3300009163	Freshwater Lake	MNTRIGTNTRVCPPAPPSTPFPEDTSEYYGWFSEAAQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDSYVGREYVRSNYD*
Ga0114974_100079613	3300009183	Freshwater Lake	VFFGWYSEAAQQLRIAYPSHHKFNGKVMTSPPYCYWSQGDKNVIVTEVTHTSIPTPRQVKNGDICVGQLDKYIGRSYLRL*
Ga0114974_105362902	3300009183	Freshwater Lake	PTSTPCPEDTSEYYGWYSEALQQLRISHTSTHKFNGKIMESPPYTYWTRYGGGDGGADGAKVLITEVTHTSIPTPRQLANGDICVGRVDKYWGRSYTRLA*
Ga0129333_100882551	3300010354	Freshwater To Marine Saline Gradient	MSTSGIPITPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSEHLVHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL*
Ga0129333_108335162	3300010354	Freshwater To Marine Saline Gradient	MNTPPSTPFPEDTSVFYGWYSEAAQQLRVSHPSEHFYKGKIITRPPYCYWIQGDKKVLVTEVTHTDIPTPAQKKNGDISLGKLDKYWGRAYSRL*
Ga0129333_110922681	3300010354	Freshwater To Marine Saline Gradient	MNTPPSTPYPEDTTVFFGWYSEAAQAMRVSCPSHHKFNGKVMTSPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVFVGQLDKYFGRTYWRL*
Ga0129333_113356112	3300010354	Freshwater To Marine Saline Gradient	MSHSSSTGNIPPATPPSTPYPEDTSVFFGWYSEAAQQRRINYPSHHHLNGKEIVSPPYCYWTQGDKKVLVTEVTHTSIPTPRQLANGDVCIGQVDKYFGRMYYRLLGQLSCNK*
Ga0129336_100689992	3300010370	Freshwater To Marine Saline Gradient	MATSGIPITPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSEHLVHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL*
Ga0133913_1001429815	3300010885	Freshwater Lake	MPEQTDLYFGWFSQAQQQMRISYPTEHMHNGKTMKSPPYTYWTQGDRKVLVTEITHSGIPTPRQVKNGDIYLGQVDKYCCRSYTRLAEVNEVKNM*
Ga0133913_107455255	3300010885	Freshwater Lake	MNNRINCRIPVAPPSTPTPDQTSQYFGWYSPALQQLILSHPTTHLFKGKLITSPPYTYWYQGDKKVLVTEITLSSLPTPRQIKNGDIYMGLLDKYYGRSYTRLD*
Ga0133913_111894472	3300010885	Freshwater Lake	MTSRTGSILPPTPPSTPFPENTSEYYGWFSEALQQLRVSNPTIHTYAGKIIQGPQYAYWTQGDKKVLITEVTHTSIPSARQVANGDICVGRVDKYWGRSYTRLN*
Ga0119951_10022203	3300012000	Freshwater	MYTIINRLKFNRTMNTNNCPPAPPSTPYPEDTNEYHGWYSHAQQVMRVSHPSSHKFNGKIMVSPPYCYWTQGDRKVLVTEVSHTSIPTPRQVANGDIYLGRVDKYWGRSYTRLAETS*
Ga0129338_12322711	3300012970	Aqueous	PPSTPFPEDTSEYYGWFSEAAQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDKYVGREYTRLGALNLKT*
Ga0164293_100353458	3300013004	Freshwater	MNAPPSTPFPEDTSVFYGWYSEAAQQLRVLHPSEHLYNGKIITRPPYCYWIQGDKKVLVTEVTHTDIPTPAQKKNGDISLGKLDKYWGRAYSRL*
Ga0163212_11786282	3300013087	Freshwater	ILSMTKITMTITTNTTSYPPTPSSTPYPEDTAVYFGWYSEAAQRLRISHQTEHCYNNKHIKSPPYCYWLQGKKKVLVTEVTHTSIPTPRQKANGDICVGQLDKYFARSYSKLY*
(restricted) Ga0172373_100359911	3300013131	Freshwater	TNKRTNERMNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSNPSHHKFNGKVMTSPPYCYWTQGDKKVLVTEVTHTSVPTQRQVANGDICVGQVDKYWGRSYSRL*
(restricted) Ga0172372_100090049	3300013132	Freshwater	MNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSNPSHHKFNGKVMTSPPYCYWTQGDKKVLVTEVTHTSVPTQRQVANGDICVGQVDKYWGRSYSRL*
Ga0194113_103581552	3300020074	Freshwater Lake	MNERTNTHVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSDPSHHKFNGNMMTSPPYCYWTQGDKKVLVTEVTHTNIPTQRQVANGDICIGQVDKYWGRSYSRL
Ga0194112_102944652	3300020109	Freshwater Lake	MSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPSEHRFDGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRTYSRL
Ga0211733_107689042	3300020160	Freshwater	MTTSARTITRVYPPAPPSTPFPEDTTEYYGWFSEAAQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDRYVGREYVRR
Ga0194134_102130492	3300020179	Freshwater Lake	MNKRVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSNPSHHKFNRKVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194134_102661632	3300020179	Freshwater Lake	MNTHVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSDPSHHKFNGNMITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194118_100310501	3300020190	Freshwater Lake	YYQTNERTTMSTSRFPITPPSTPYPEDTSVFFGWYSEAAQSMRVSNPSHHKFNGNVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRTYSRL
Ga0194118_100952341	3300020190	Freshwater Lake	MNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSEPSHYKFNGKVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQIDKYWGRTYSRL
Ga0194118_104619672	3300020190	Freshwater Lake	MSTCPITPPSTPYPEDTSVFFGWYSEAAQQLRVSHPSEHRVHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRLYSRL
Ga0194124_100215278	3300020196	Freshwater Lake	MTFPTCPPTPCSTPCANQTELYFGWYSDAIQQLRIDHPTLHVYKGHTIPSPPFTYWLQGDRKVLVTEVTHTSIPTPRQIKNGDIYLGLLDKYWGRTYTSVK
Ga0194124_104228582	3300020196	Freshwater Lake	ERTTMSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPSEHLVRGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL
Ga0194124_104424461	3300020196	Freshwater Lake	MNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSEPSHHKFNGNVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194128_101736712	3300020197	Freshwater Lake	MTITTNTTSYPPTPSSTPYPEDTAVYFGWYSEAAQRLRISHQTEHCYNNKHIKSPPYCYWLQGKKKVLVTEVTHTSIPTPRQKANGDICVGQLDKYFARSYSKLY
Ga0194120_101767641	3300020198	Freshwater Lake	MNERTNTRVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSEPSHHKFNGNVMTSPPYCYWTQGDKKVLVTEVTHTNIPTQRQVANGDICIGQVDKYWGRSYSRL
Ga0194121_104040921	3300020200	Freshwater Lake	TPFPEDTNEYHGWYSEAAQQLRVSYPSRHKYNRQIMESPPYCYWMQGDRKVLVTEVTHTSIPTPRQVANGDIYLGRIDKYWGRSYTRLFS
Ga0194116_101611013	3300020204	Freshwater Lake	LIDNNNYAIIIHPSMNAPPSTPFPEDTSVFYGWYSEAAQQLRVLNPSEHLYNGKIIMRPPYCYWIQDDKKVLVTEVTHTDIPTPAQKKNGDISLGKLDKYWGRAYSRL
Ga0194116_102490162	3300020204	Freshwater Lake	MSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPSEHLVRGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL
Ga0194132_100283796	3300020214	Freshwater Lake	MSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPFEHLVRGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL
Ga0194132_100728622	3300020214	Freshwater Lake	MNARVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSEPSHHKFNGKVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVHKYWGRSYSRL
Ga0194132_101552072	3300020214	Freshwater Lake	MNERTNTRVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSEPSHHKFNGNVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194127_102249191	3300020221	Freshwater Lake	PPTPCSTPCANQTELYFGWYSDAIQQLRIDHPTLHVYKGHTIPSPPFTYWLQGDRKVLVTEVTHTSIPTPRQIKNGDIYLGLLDKYWGRTYTSVK
Ga0194125_102380032	3300020222	Freshwater Lake	MSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPSEHRFDGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDIC
Ga0194129_100874894	3300020578	Freshwater Lake	MNTRICPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSEPSHYKFNGKVMTSPPYCYWTQGDKKVLGTEVTHTSIPTQRQVANGDICVGQIDKYWGRTYSRL
Ga0194129_100890745	3300020578	Freshwater Lake	TTMSTSRFPITPPSTPYPEDTSVFFGWYSEAAQAMRVSYPSEHRFDGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRTYSRL
Ga0194133_100401881	3300021091	Freshwater Lake	MTTRVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSEPSHHNFNGNVMTSPPYCYWTQGDTKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194133_101625512	3300021091	Freshwater Lake	MNTHVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSNPSHHKFNGNVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVHKYWGRSYSRL
Ga0194133_103852392	3300021091	Freshwater Lake	TNERTNERMTTRVCPPAPPSTPYPEDTSVFFGWYSEAAQAMRVSNPSHHKFNRKVMTSPPYCYWTQGDKKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRSYSRL
Ga0194133_104399312	3300021091	Freshwater Lake	CPPAPPSTPYPEDTSVFFGWYSEAAQAMRLSEPSHHNFNGKVMTSPPYCYWTQGDTKVLVTEVTHTSIPTQRQVANGDICVGQVDKYWGRTYSRL
Ga0214921_100292803	3300023174	Freshwater	MTNTPPSTPFPEDTSEYHGWYSEAQQQLRVSYPSRHKFNGKLMVSPPYTYWTQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRLGVLNLKNE
Ga0255209_100013128	3300024280	Freshwater	MTTPRTPRTPTSTPFPEETSEYYGWFSEALQQLRISHISQHKFNGKILESPPYTYWTRYGGTDGEKVLITEVTHTSIPTPRQLANGDIFVGRVDKYWGRSYTRIDTRLP
Ga0255209_10111461	3300024280	Freshwater	MYTIINRLKFNRTMNAKICPPAPPSTPFPEDTNEYHGWYSEAQQVMRVSHPSSHIFNGKIMVSPPYCYWTQGERKVLVTEVTHTSIPTPRQVANGDIYLGQVDKYWGRSYTRIVANVLKTDGSADHTADTRTAT
Ga0255209_10315882	3300024280	Freshwater	MSTTPITPPSTPYPEDTSVFFGWYSEAAQQLRVSHPSEHRVHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL
Ga0255211_10022963	3300024311	Freshwater	MATSGIPITPPSTPYPEDTSVFFGWYSEAAQAMRVSHPSEHLVHGKIITSPPYCYWTQGDKKVLVTEVTHTSIPTQRQAANGDICVGQVDKYWGRSYSRL
Ga0255211_10039003	3300024311	Freshwater	MYTIINRLKFNRTMNAKICPPAPPSTPFPEDTNEYHGWYSEAQQVMRVSHPSSHIFNGKIMVSPPYCYWTQGERKVLVTEVTHTSIPTPRQVANGDIYLGRVDKYWGRSYTRIVANVLKTDGSADHTADTRTAT
Ga0255173_10112981	3300024358	Freshwater	MSSRTPPSTPYPENPAVFYGWYSEAAQQLRVYNPSYHYFKGKVLTNPPYCYWTQGDNKILVTEVTHSSIPTPRQVKNGDIFVGQVDKYWGRTYNKL
Ga0255302_11021301	3300024551	Freshwater	AKICPPAPPSTPFPEDTNEYHGWYSEAQQVMRVSHPSSHIFNGKIMVSPPYCYWTQGERKVLVTEVTHTSIPTPRQVANGDIYLGRVDKYWGRSYTRIVANVLKTDGSADHTADTRTAT
Ga0255280_10366621	3300024555	Freshwater	IMSSRTPPSTPYPENPAVFYGWYSEAAQQLRVYNPSYHYFKGKVLTNPPYCYWTQGDNKILVTEVTHSSIPTPRQVKNGDIFVGQVDKYWGRTYNKL
Ga0255220_10053452	3300027306	Freshwater	MNAKICPPAPPSTPFPEDTNEYHGWYSEAQQVMRVSHPSSHIFNGKIMVSPPYCYWTQGERKVLVTEVTHTSIPTPRQVANGDIYLGRVDKYWGRSYTRIVANVLKTDGSADHTADTRTA
Ga0255093_10980601	3300027492	Freshwater	TSTRVCPPAPPSTPFPEDTSEYYGWFSEAAQQLRVSYPTVHMHMRTKQIMMSPPYTYWMQGDKKVLVTEVTHTSIPTPRQVANGDICVGRVDKYVGREYTRLGALNLKIG
Ga0209770_100092651	3300027769	Freshwater Lake	NERTNERQAMPSQCPPTPPSTPFPEDTSEYYGWFSEALQQLRVSNPTSHNYAGKIIQGPAYTYWTQGDKKVLVTEITHTSIPTARQVANGDICVGRVDKYWGRSYTRLVG
Ga0209770_103040552	3300027769	Freshwater Lake	MTSRNGMITPPSTPYPEDTSEYHGWFSPAQQQLRISHPTEHVVAGKIITSPPYTYWIQGARKVLVTEITHTSIPTPRQVKNGDIYLGKLDKYWGRSYTQLG
Ga0209086_100581263	3300027770	Freshwater Lake	NKLIDNNCNYYYQTNELRMKTPTTPPPTPFPEDTSEYYGWFSEALQQLRVSYPSRHKFNGTILEGPPYMYWTQGDNKVLVTEITHTSIPTPRQVANGDICVGRVDKYWGRSYVRRCW
Ga0209358_101021261	3300027804	Freshwater Lake	LSNHGLPATPPSTPYPEDTSVFFGWYSEAEQQLMVSNPSYHKFNGKVITRPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVCVGQLDKYIGRMYSRL
Ga0209191_12116672	3300027969	Freshwater Lake	MPEQTDLYFGWFSQAQQQMRISYPTEHIHNGKTMKSPPYTYWTQGDRKVLVTEITHSGIPTPRQVKNGDIYLGQVDKYCCRSYTRLAE
Ga0209299_12694391	3300027974	Freshwater Lake	ILLYYYQIMSRSLSNHGLPATPPSTPYPEDTSVFFGWYSEAEQQLMVSNPSYHKFNGKIITRPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVCVGQLDKYIGRMYSRL
Ga0247722_100009913	3300028027	Deep Subsurface Sediment	MSVPPTPPSTPFPEDTSMYFGWFSQALQQLRISHPSRHIINGKILESPPYMYWTQGNRKVLVTEVTHSSIPTPRQVKNGDIYLGQIDKYWGRSYTRLAELNEKTP
Ga0255172_10800532	3300028103	Freshwater	MLLSTIVSLLMNAPPSTPYPEDTAMFYGWYSEAAQQLRVLHPSEHLYNGKIITRPPYCYWLQGDKKVLVTEVTHTDIPTPQQKTNGDICVGKVDKYWGRAYSKL
Ga0315904_114525411	3300031951	Freshwater	MQPSGLEPTTPPSTPYPEDTSEYHGWFSPAQQQLRISHPTEHVVAGKIIQSPPYTYWIQGCRKVLVTEITHTSIPTPRQVKNGDIYLGKLDKYWGRSYTQLGETNLKNE
Ga0315906_109659163	3300032050	Freshwater	TMTNTPPSTPFPEDTSEYHGWYSEALQQLRVSYPSRHKFNGKLMVSPPYTYWTQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRLGVLNLKNE
Ga0315906_110357602	3300032050	Freshwater	PSTPYPEDSTLFFGWYSEAAQQLRLANPSQHKFNGKIIISPPYCYWIQRDKKVLVTEVTHTSIPTPRQVKNGDICIGQLDKYFGRTYSRL
Ga0334985_0407121_3_344	3300034018	Freshwater	IVMTIIKRPTTERRMMTPTSTPIPEDTSEYYGWFSEALQQLRISHTSMHKFNGKILESPPYTYWTRYGGADGAKVLVTEVTHTSVPTQRQVANGDICVGRVDKYWGRSYTRLR
Ga0335004_0005472_1112_1441	3300034021	Freshwater	MSFPNCPPSTPLPDQTELYFGWFSEAQQQLRVSSPTEHRFNGKYIISPPYCYWTQGDKKVLVTEITHSSIPTERQVKNGDIYLGQVDKYWGRSYTRLRAEMATATEVGK
Ga0335004_0604642_153_437	3300034021	Freshwater	MNAPPSTPFPEDTSVFYGWYSEAAQQLRVLHPSEHLYNGKIITRPPYCYWIQGDKKVLVTEVTHTDIPTPAQKKNGDISLGKLDKYWGRAYSRL
Ga0334987_0325295_716_1006	3300034061	Freshwater	MTRTNTKCGVIAPPSTPFPEDTSEYHGWYSEAHQQLRVSNPSNHKFNEKLMKSPPYCYWTQGDRKVLVTEVTHTSIPTPRQVANGDIYVGRLDKYVG
Ga0334995_0568492_380_664	3300034062	Freshwater	PTPPSTPFPEDTSDYYGWFSEALQQLRVSNPTNHKYAGKIIQGPPYTYWTQGDKKVLITEITHTSIPTERQVANGDLCVGRVDKYWGRSYTRLG
Ga0335019_0189876_825_1109	3300034066	Freshwater	MNTPPSTPYPEDTTVFFGWYSEAAQAMRVSCPSHHKFNGKVMTSPPYCYWLQGDKKVLVTEVTHSSIPTPRQVANGDVFVGQLDKYFGRTYWRL
Ga0335029_0514722_84_395	3300034102	Freshwater	MTTTPPSTPFPEDTNEYHGWYSEALQQLRVSNPSHHKFNGKIMVSPPYCYWIQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRLGVLNLKNE
Ga0335035_0332443_359_646	3300034105	Freshwater	MPEQTDLYFGWFSQAQQQMRISYPTEHMHNGKTMKSPPYTYWTQGDRKVLVTEITHSGIPTPRQVKNGDIYLGQVDKYCCRSYTRLAEVNEVKNL
Ga0335068_0000074_83122_83430	3300034116	Freshwater	MSILPPTPPSTPFPEDTSLYFGWYSQASQQLRISNPTTHLHNGKIIMSPPYMYWTQGYRKVLVTEVTHSSIPTPRQVKNGDIYLGQVDNYWGRSYTRFAEDK
Ga0335013_0678531_125_436	3300034284	Freshwater	MTTTPPSTPFPEDTNEYHGWYSEALQQLRVSNPSHHKFNGKIMVSPPYCYWTQGDQKVLVTEVTHTSIPTPRQVANGDIYLGKIDKYWGRSYTRHGVLNLKNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters