Metagenome / Metatranscriptome Family F098363

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098363
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	47 residues
Representative Sequence	EKRGANTFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Number of Associated Samples	55
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	63.11 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.019 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (81.553 % of family members)
Environment Ontology (ENVO)	Unclassified (55.340 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 39.58% Coil/Unstructured: 60.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02518	HATPase_c	4.85
PF01180	DHO_dh	4.85
PF09723	Zn-ribbon_8	3.88
PF07963	N_methyl	3.88
PF00154	RecA	1.94
PF07679	I-set	1.94
PF00005	ABC_tran	1.94
PF16363	GDP_Man_Dehyd	1.94
PF00578	AhpC-TSA	1.94
PF00155	Aminotran_1_2	1.94
PF01292	Ni_hydr_CYTB	1.94
PF13616	Rotamase_3	1.94
PF01769	MgtE	0.97
PF08245	Mur_ligase_M	0.97
PF04305	DUF455	0.97
PF14720	NiFe_hyd_SSU_C	0.97
PF02517	Rce1-like	0.97
PF17147	PFOR_II	0.97
PF12969	DUF3857	0.97
PF07479	NAD_Gly3P_dh_C	0.97
PF09286	Pro-kuma_activ	0.97
PF13649	Methyltransf_25	0.97
PF14602	Hexapep_2	0.97
PF07244	POTRA	0.97
PF00202	Aminotran_3	0.97
PF01207	Dus	0.97
PF04892	VanZ	0.97
PF08447	PAS_3	0.97
PF01464	SLT	0.97
PF00543	P-II	0.97
PF13565	HTH_32	0.97
PF00873	ACR_tran	0.97
PF00293	NUDIX	0.97
PF05016	ParE_toxin	0.97
PF05593	RHS_repeat	0.97
PF00078	RVT_1	0.97
PF02049	FliE	0.97
PF00571	CBS	0.97
PF02540	NAD_synthase	0.97
PF08448	PAS_4	0.97
PF11127	DUF2892	0.97
PF01609	DDE_Tnp_1	0.97
PF00975	Thioesterase	0.97
PF00271	Helicase_C	0.97
PF13385	Laminin_G_3	0.97
PF00664	ABC_membrane	0.97
PF01312	Bac_export_2	0.97
PF03796	DnaB_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	5.83
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	4.85
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	4.85
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	4.85
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	4.85
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.94
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	1.94
COG1677	Flagellar hook-basal body complex protein FliE	Cell motility [N]	1.94
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	1.94
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	1.94
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	1.94
COG3038	Cytochrome b561	Energy production and conversion [C]	1.94
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.97
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.97
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.97
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.97
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.97
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.97
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.97
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.97
COG2833	Uncharacterized protein, contains ferritin-like DUF455 domain	Function unknown [S]	0.97
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.97
COG1824	Permease, similar to cation transporters	Inorganic ion transport and metabolism [P]	0.97
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.97
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.97
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.97
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.97
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.02 %
Unclassified	root	N/A	33.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.24 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25.24 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.91 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	10.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	10.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	9.71 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	7.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.94 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.94 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.91 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1.94 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.94 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300014167\|Ga0181528_10066139	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300014167\|Ga0181528_10585491	Not Available	617	Open in IMG/M
3300014167\|Ga0181528_10598493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300014167\|Ga0181528_10634496	Not Available	594	Open in IMG/M
3300014167\|Ga0181528_10730200	Not Available	554	Open in IMG/M
3300014167\|Ga0181528_10824610	Not Available	522	Open in IMG/M
3300014167\|Ga0181528_10825860	Not Available	522	Open in IMG/M
3300014168\|Ga0181534_10107116	Not Available	1404	Open in IMG/M
3300014655\|Ga0181516_10539021	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300014658\|Ga0181519_11023334	Not Available	513	Open in IMG/M
3300019256\|Ga0181508_1643930	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300019270\|Ga0181512_1602086	Not Available	644	Open in IMG/M
3300022872\|Ga0224526_1083654	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026456\|Ga0255351_1044002	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026456\|Ga0255351_1056966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300028552\|Ga0302149_1037181	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300028560\|Ga0302144_10021338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2092	Open in IMG/M
3300028560\|Ga0302144_10146229	Not Available	764	Open in IMG/M
3300028566\|Ga0302147_10103177	Not Available	977	Open in IMG/M
3300028566\|Ga0302147_10143887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	809	Open in IMG/M
3300028566\|Ga0302147_10220779	Not Available	635	Open in IMG/M
3300028745\|Ga0302267_10083305	Not Available	1621	Open in IMG/M
3300028748\|Ga0302156_10009195	All Organisms → cellular organisms → Bacteria	6461	Open in IMG/M
3300028748\|Ga0302156_10022274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3714	Open in IMG/M
3300028748\|Ga0302156_10071063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1823	Open in IMG/M
3300028748\|Ga0302156_10278672	Not Available	756	Open in IMG/M
3300028748\|Ga0302156_10355119	Not Available	646	Open in IMG/M
3300028762\|Ga0302202_10157393	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300028785\|Ga0302201_10201390	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300028785\|Ga0302201_10223349	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300028813\|Ga0302157_10100592	Not Available	1817	Open in IMG/M
3300028854\|Ga0302268_1017922	Not Available	1932	Open in IMG/M
3300028859\|Ga0302265_1072934	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300028859\|Ga0302265_1148319	Not Available	729	Open in IMG/M
3300028866\|Ga0302278_10026343	All Organisms → cellular organisms → Bacteria	4092	Open in IMG/M
3300028866\|Ga0302278_10135554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1305	Open in IMG/M
3300028873\|Ga0302197_10315790	Not Available	702	Open in IMG/M
3300028874\|Ga0302155_10029839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2604	Open in IMG/M
3300028874\|Ga0302155_10456903	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300028882\|Ga0302154_10054610	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300028882\|Ga0302154_10377616	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300029883\|Ga0311327_10026757	All Organisms → cellular organisms → Bacteria	4807	Open in IMG/M
3300029883\|Ga0311327_10028918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	4595	Open in IMG/M
3300029883\|Ga0311327_10276158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1104	Open in IMG/M
3300029907\|Ga0311329_10004418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	13351	Open in IMG/M
3300029907\|Ga0311329_10039402	All Organisms → cellular organisms → Bacteria	4192	Open in IMG/M
3300029907\|Ga0311329_10249874	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300029908\|Ga0311341_10115384	Not Available	1789	Open in IMG/M
3300029908\|Ga0311341_10383179	Not Available	817	Open in IMG/M
3300029908\|Ga0311341_10459868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300029911\|Ga0311361_10002828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	37249	Open in IMG/M
3300029911\|Ga0311361_10008021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	21379	Open in IMG/M
3300029914\|Ga0311359_10019185	All Organisms → cellular organisms → Bacteria	8405	Open in IMG/M
3300029914\|Ga0311359_10023356	All Organisms → cellular organisms → Bacteria	7372	Open in IMG/M
3300029914\|Ga0311359_10043913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4853	Open in IMG/M
3300029914\|Ga0311359_10054517	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4207	Open in IMG/M
3300029914\|Ga0311359_10223536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1629	Open in IMG/M
3300029916\|Ga0302148_1094900	Not Available	847	Open in IMG/M
3300029917\|Ga0311326_10135426	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300029918\|Ga0302143_1024880	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300029922\|Ga0311363_10267956	Not Available	1960	Open in IMG/M
3300029922\|Ga0311363_11184205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300029945\|Ga0311330_10001052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	34317	Open in IMG/M
3300029945\|Ga0311330_10012686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	10175	Open in IMG/M
3300029945\|Ga0311330_10024214	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7033	Open in IMG/M
3300029952\|Ga0311346_10035418	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7537	Open in IMG/M
3300029953\|Ga0311343_10086750	All Organisms → cellular organisms → Bacteria	3663	Open in IMG/M
3300029953\|Ga0311343_10117291	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300029954\|Ga0311331_10006614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	19210	Open in IMG/M
3300029954\|Ga0311331_10045296	All Organisms → cellular organisms → Bacteria	6257	Open in IMG/M
3300029955\|Ga0311342_10194338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1969	Open in IMG/M
3300029955\|Ga0311342_10238193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1713	Open in IMG/M
3300029956\|Ga0302150_10061979	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300029956\|Ga0302150_10129574	Not Available	965	Open in IMG/M
3300029982\|Ga0302277_1042718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2257	Open in IMG/M
3300029986\|Ga0302188_10109222	Not Available	1224	Open in IMG/M
3300029992\|Ga0302276_10011432	All Organisms → cellular organisms → Bacteria	6841	Open in IMG/M
3300029994\|Ga0302283_1089279	Not Available	1303	Open in IMG/M
3300030004\|Ga0302186_10324107	Not Available	512	Open in IMG/M
3300030011\|Ga0302270_10041005	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300030011\|Ga0302270_10077885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2165	Open in IMG/M
3300030011\|Ga0302270_10203204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1144	Open in IMG/M
3300030020\|Ga0311344_10072658	All Organisms → cellular organisms → Bacteria	4074	Open in IMG/M
3300030041\|Ga0302274_10007925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8582	Open in IMG/M
3300030041\|Ga0302274_10016829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5158	Open in IMG/M
3300030041\|Ga0302274_10021607	All Organisms → cellular organisms → Bacteria	4366	Open in IMG/M
3300030045\|Ga0302282_1015822	All Organisms → cellular organisms → Bacteria	4149	Open in IMG/M
3300030051\|Ga0302195_10045385	Not Available	2500	Open in IMG/M
3300030506\|Ga0302194_10077813	Not Available	1530	Open in IMG/M
3300030506\|Ga0302194_10329324	Not Available	602	Open in IMG/M
3300030506\|Ga0302194_10446478	Not Available	501	Open in IMG/M
3300030507\|Ga0302192_10094126	Not Available	1411	Open in IMG/M
3300030507\|Ga0302192_10100742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1350	Open in IMG/M
3300030507\|Ga0302192_10125557	Not Available	1167	Open in IMG/M
3300030518\|Ga0302275_10007300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	10295	Open in IMG/M
3300030519\|Ga0302193_10168688	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300030519\|Ga0302193_10274458	Not Available	900	Open in IMG/M
3300030519\|Ga0302193_10472341	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300030688\|Ga0311345_10005230	All Organisms → cellular organisms → Bacteria	20008	Open in IMG/M
3300031258\|Ga0302318_10167115	Not Available	1040	Open in IMG/M
3300031524\|Ga0302320_10873220	Not Available	979	Open in IMG/M
3300031788\|Ga0302319_10006656	All Organisms → cellular organisms → Bacteria	22882	Open in IMG/M
3300031788\|Ga0302319_10008121	All Organisms → cellular organisms → Bacteria	20513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.35%
Aquatic	Environmental → Aquatic	11.65%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	88.35%
Freshwater	Environmental → Aquatic → Freshwater	11.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	88.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	88.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.65%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	81.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0181528_100661391	3300014167	Bog	TRPAGLETCDTAGWEACATRVCHVFAGFTMKYPG*
Ga0181528_105854911	3300014167	Bog	RGANTFEGVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG*
Ga0181528_105984932	3300014167	Bog	YEKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG*
Ga0181528_106344961	3300014167	Bog	CECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG*
Ga0181528_107302001	3300014167	Bog	KRGANTFECVAEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG*
Ga0181528_108246102	3300014167	Bog	ECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG*
Ga0181528_108258602	3300014167	Bog	EKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG*
Ga0181534_101071161	3300014168	Bog	KSREKPYEKRGANTCEFVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG*
Ga0181516_105390211	3300014655	Bog	MFECAVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0181519_110233342	3300014658	Bog	REKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATMICHGFAGFTMKYPGKHVRMRG
Ga0181508_16439301	3300019256	Peatland	ANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0181512_16020861	3300019270	Peatland	QRGANMFECVVEKTRHAGLETYTAGWEACATRVCHGFAGFTMKYPS
Ga0224526_10836542	3300022872	Soil	HFGERREKPYEKRGANTFECAVETTRHAGLETCEPKLGLPTAGGEACATRVGHGFAGFTMKYPG
Ga0255351_10440021	3300026456	Soil	EKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0255351_10569662	3300026456	Soil	MGAKRFESFIEKTRRAGLETCDTAGWEACATRVGKVLADFIMKHPG
Ga0302149_10371811	3300028552	Bog	GKGREKPYEKRGANTFECVAEKTRHAGWETCDTAGWEACATMVGHGFAGFTMKLPN
Ga0302144_100213381	3300028560	Bog	TFECVAEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302144_101462291	3300028560	Bog	EKRGVNKFGCVVEKTRHAGLETCDTAGWEACATRVCVALGDFAMKYPGYVHGLERRL
Ga0302147_101031771	3300028566	Bog	EKPYEKRGANTFECVVEKTRHAGLETCGTAGWEACATRVCHGFAGFTMKYPG
Ga0302147_101438872	3300028566	Bog	QPTEKMGAKRFESFIEKTRRAGLETCDTAGWEACATRVGKVLADFIMKHPG
Ga0302147_102207791	3300028566	Bog	RREYPHEKRGVNKFGCVVEKTRHAGLETCDTAGWEACATRVCLALGDFAMKYPG
Ga0302267_100833051	3300028745	Bog	CVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302156_100091954	3300028748	Bog	SHLGKGREKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0302156_100222741	3300028748	Bog	EKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302156_100710631	3300028748	Bog	ANKSGCVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302156_102786721	3300028748	Bog	AVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302156_103551191	3300028748	Bog	ECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302202_101573931	3300028762	Bog	YFGESREKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302201_102013901	3300028785	Bog	TFECVAEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302201_102233491	3300028785	Bog	FECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0302157_101005923	3300028813	Bog	EQPTEKMGAKRFESFIEKTRRAGLETCDTAGWEACATRVGKVLADFIMKHPG
Ga0302268_10179221	3300028854	Bog	EKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302265_10729341	3300028859	Bog	VEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302265_11483191	3300028859	Bog	VAKSPMKKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302278_100263431	3300028866	Bog	VVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302278_101355542	3300028866	Bog	EKRYEKRGANTCECVVEKTRHAGLETCDTAGWEACATRVGHGFAGSTMKYPG
Ga0302197_103157903	3300028873	Bog	ANTFECVAEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302155_100298391	3300028874	Bog	VAEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302155_104569032	3300028874	Bog	EKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATMVCHGFAGIIMKYPG
Ga0302154_100546101	3300028882	Bog	VETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302154_103776161	3300028882	Bog	KSREKPHEKRGANTFECVAEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311327_100267571	3300029883	Bog	CVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311327_100289181	3300029883	Bog	ECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0311327_102761581	3300029883	Bog	KRGANTCEGVVEKPRHAGLETCDTAGWEACATMVCHGLAGFTMKYPG
Ga0311329_100044181	3300029907	Bog	GREKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0311329_100394021	3300029907	Bog	YEKRGANTFECVVETTRHAGLETCDTAGWEACATMVCHGFAGIIMKYPG
Ga0311329_102498741	3300029907	Bog	KSREKPYEKRGANTFECVAEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311341_101153841	3300029908	Bog	HFGKSREKPYEKRGANTFECAVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311341_103831791	3300029908	Bog	VAEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311341_104598682	3300029908	Bog	SFIEKTRRAGLETCDTAGWEACATRVGKVLADFIMKHPG
Ga0311361_100028281	3300029911	Bog	MKKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311361_100080211	3300029911	Bog	LGKSREKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311359_100191851	3300029914	Bog	YEKRGANTCECVVEKTRHAGLETCDTAGWEACATRVGHGFAGSTMKYPG
Ga0311359_100233564	3300029914	Bog	EKPYEKRGANTFECAVETTRHAGLETCEPKLGLPTAGGEACATRVGHGFAGFTMKYPG
Ga0311359_100439131	3300029914	Bog	FECVVETTRHAGLETCDTAGWEACATRVCHGFAAIY
Ga0311359_100545171	3300029914	Bog	NTCEYVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311359_102235361	3300029914	Bog	EKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0302148_10949001	3300029916	Bog	MGAKRFESFIEKTRRAGLETCDTAGWEACATRVGKVLADFIMNDPG
Ga0311326_101354261	3300029917	Bog	FVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302143_10248801	3300029918	Bog	KTRNAGLETCDTAGWEACATMICHGFAGFTMKYPG
Ga0311363_102679561	3300029922	Fen	EKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311363_111842051	3300029922	Fen	ECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311330_100010521	3300029945	Bog	PYEKRGANTCEFVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311330_100126861	3300029945	Bog	FHSHFGKSREKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATRVCHGFAAIY
Ga0311330_100242141	3300029945	Bog	VVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311346_100354181	3300029952	Bog	TFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311343_100867501	3300029953	Bog	YFIAILERVAKSPMKNRGANTFECVVEKTRHAGLETCATRGGHGFAGFTMKYPG
Ga0311343_101172912	3300029953	Bog	LGKSREKPYEKRGANTFECVAEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0311331_100066141	3300029954	Bog	SREKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0311331_100452961	3300029954	Bog	KRGANTFECVVETTRHAGLETCDTAGWEACATRVCHGFAGFALKYPG
Ga0311342_101943383	3300029955	Bog	EGVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTVKYPG
Ga0311342_102381931	3300029955	Bog	KGREKPYEKRGANTFECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFAMKYPG
Ga0302150_100619791	3300029956	Bog	CEYVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302150_101295741	3300029956	Bog	AEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302277_10427181	3300029982	Bog	FHSHLGKSREKPYEKRGANTCECVVEKTRHAGLETCDTAGWEACATRVRHGFAGFTMKYP
Ga0302188_101092223	3300029986	Bog	KRGANKSGCVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302276_100114321	3300029992	Bog	YEKRGANTFECAVEKTRHAGLETCDTAGWEACATWVCVILADFTMKHPG
Ga0302283_10892791	3300029994	Fen	KRGANTFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302186_103241071	3300030004	Bog	EPYEKRGANTFGCVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302270_100410051	3300030011	Bog	GKSREKPYEKRGANTCEFVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302270_100778851	3300030011	Bog	KPYEKRGANTFECAVETTRHAGLETCEPKLGLPTAGGEACATRVGHGFAGFTMKYPG
Ga0302270_102032041	3300030011	Bog	GKSREKPYEKRGANTCECVVEKTRHAGLETCDTAGWEACATRVGHGFAGSTMKYPG
Ga0311344_100726581	3300030020	Bog	EKRGANTFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302274_100079251	3300030041	Bog	ANTFECVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302274_100168291	3300030041	Bog	TFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302274_100216071	3300030041	Bog	FEGVVETTRHAGLETCDTAGWEACATRVCHGFGSTMKYPG
Ga0302282_10158221	3300030045	Fen	YEKRGANTFEGVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302195_100453851	3300030051	Bog	GHFGETREKAYEKRGANTFECVVEKPRHAGWETCDTAGWEACAARVCHGFDGFTMKYPG
Ga0302194_100778131	3300030506	Bog	SREKPYEKRGANTFECAVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302194_103293241	3300030506	Bog	ECVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302194_104464781	3300030506	Bog	IFHSHWGKSREKPYEKRGANKFECVVEKTRHAGLETCDTAGWEACATRVCHGFVGITMKYPG
Ga0302192_100941261	3300030507	Bog	NKSGCVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKFPG
Ga0302192_101007424	3300030507	Bog	YEKRGANTCEGVVEKPRHAGLETCDTAGWEACATMVCHGLAGFTMKYPG
Ga0302192_101255572	3300030507	Bog	REKPYEKWGANTCECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302275_100073001	3300030518	Bog	LGKSREKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATMVCHGFAGIIMKYPG
Ga0302193_101686881	3300030519	Bog	KPHEKRGANTFECVAEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302193_102744581	3300030519	Bog	CECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302193_104723411	3300030519	Bog	HFGKSREKPYEKRGANTFECVVEKTRHAGLETCDTAGLEACATMVCHGFAGFTMKYRG
Ga0311345_1000523017	3300030688	Bog	FECVVEKTRHAGLETCDTAGWEACATMVCHGFAGFTMKYPG
Ga0302318_101671152	3300031258	Bog	LERVAKKPHEKRGANTFECVVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302320_108732201	3300031524	Bog	TCECVVETTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302319_1000665615	3300031788	Bog	NTFEGAVEKTRHAGLETCDTAGWEACATRVCHGFAGFTMKYPG
Ga0302319_100081211	3300031788	Bog	GKSREKPYEKRGANTFECVVETTRHAGLETCDTAGWEACATMVCHGFAGIIMKYPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098363

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences