Metagenome / Metatranscriptome Family F098298

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098298
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	46 residues
Representative Sequence	PVYAFSANNGANGCVDCQGGNNGKITGLEGGTTMRQLQFAIRFDF
Number of Associated Samples	94
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.74% Coil/Unstructured: 97.26%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14559	TPR_19	25.96
PF13432	TPR_16	24.04
PF00294	PfkB	5.77
PF04041	Glyco_hydro_130	4.81
PF01204	Trehalase	2.88
PF13414	TPR_11	1.92
PF13088	BNR_2	0.96
PF01229	Glyco_hydro_39	0.96
PF13444	Acetyltransf_5	0.96
PF07587	PSD1	0.96
PF03704	BTAD	0.96
PF13185	GAF_2	0.96
PF13435	Cytochrome_C554	0.96
PF00561	Abhydrolase_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	4.81
COG1626	Neutral trehalase	Carbohydrate transport and metabolism [G]	2.88
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.96
COG3664	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.96
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.77 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.15 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.23 %
Unclassified	root	N/A	2.88 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19.23 %
Unclassified	root	N/A	2.88 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.77 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.69 %
Unclassified	root	N/A	2.88 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.96 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.85 %
Unclassified	root	N/A	2.88 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.96 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10366027	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300001867\|JGI12627J18819_10004786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5108	Open in IMG/M
3300002917\|JGI25616J43925_10000650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12709	Open in IMG/M
3300004633\|Ga0066395_10870052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	544	Open in IMG/M
3300005171\|Ga0066677_10440420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	746	Open in IMG/M
3300005178\|Ga0066688_10140761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1505	Open in IMG/M
3300005187\|Ga0066675_10646931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	794	Open in IMG/M
3300005332\|Ga0066388_100454993	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005332\|Ga0066388_101229579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1284	Open in IMG/M
3300005338\|Ga0068868_101885504	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005345\|Ga0070692_11290999	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005518\|Ga0070699_100479018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1129	Open in IMG/M
3300005538\|Ga0070731_10328909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300005546\|Ga0070696_100877276	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005575\|Ga0066702_10304450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	972	Open in IMG/M
3300006028\|Ga0070717_10207129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1720	Open in IMG/M
3300006032\|Ga0066696_10339686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	978	Open in IMG/M
3300006354\|Ga0075021_10792169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300006800\|Ga0066660_10860798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	739	Open in IMG/M
3300007788\|Ga0099795_10359797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300009038\|Ga0099829_10857459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	754	Open in IMG/M
3300009038\|Ga0099829_11471057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300009090\|Ga0099827_10121377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2105	Open in IMG/M
3300009143\|Ga0099792_11056078	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300009521\|Ga0116222_1431046	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009522\|Ga0116218_1299759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300009792\|Ga0126374_10222777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300010048\|Ga0126373_10929964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300010359\|Ga0126376_12659036	Not Available	549	Open in IMG/M
3300010360\|Ga0126372_11523891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300010376\|Ga0126381_102965556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300010398\|Ga0126383_12379981	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010399\|Ga0134127_10262511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1643	Open in IMG/M
3300011077\|Ga0138572_1019981	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300011269\|Ga0137392_10455956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300011270\|Ga0137391_10991736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300012096\|Ga0137389_10050986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3127	Open in IMG/M
3300012096\|Ga0137389_10382349	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300012200\|Ga0137382_10562647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300012203\|Ga0137399_11558747	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012205\|Ga0137362_11046717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012205\|Ga0137362_11524532	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012208\|Ga0137376_10566223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300012354\|Ga0137366_10317227	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012582\|Ga0137358_10560320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012917\|Ga0137395_10622810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300012917\|Ga0137395_10920620	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300012923\|Ga0137359_10308923	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300012925\|Ga0137419_10796163	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012929\|Ga0137404_11119677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300012929\|Ga0137404_11523567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012930\|Ga0137407_11066373	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012944\|Ga0137410_11882302	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012971\|Ga0126369_10672038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300012989\|Ga0164305_11983603	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300013307\|Ga0157372_13043481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300014498\|Ga0182019_10369904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300014502\|Ga0182021_10013646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9646	Open in IMG/M
3300014969\|Ga0157376_13072488	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300015372\|Ga0132256_100077875	All Organisms → cellular organisms → Bacteria	3162	Open in IMG/M
3300015373\|Ga0132257_104031654	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300016357\|Ga0182032_12020310	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300016371\|Ga0182034_10069936	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300016371\|Ga0182034_11635042	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300017961\|Ga0187778_10006599	All Organisms → cellular organisms → Bacteria	7473	Open in IMG/M
3300017961\|Ga0187778_11154471	Not Available	541	Open in IMG/M
3300018058\|Ga0187766_11235934	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300018468\|Ga0066662_10219412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1523	Open in IMG/M
3300019870\|Ga0193746_1013778	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300020581\|Ga0210399_10919910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300021088\|Ga0210404_10033402	All Organisms → cellular organisms → Bacteria → Acidobacteria	2322	Open in IMG/M
3300021088\|Ga0210404_10778962	Not Available	546	Open in IMG/M
3300021170\|Ga0210400_10585526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300021178\|Ga0210408_11153072	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300021479\|Ga0210410_11669436	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300025930\|Ga0207701_10103293	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300026078\|Ga0207702_11429972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300026121\|Ga0207683_10003704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13268	Open in IMG/M
3300026330\|Ga0209473_1079125	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300026542\|Ga0209805_1157762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300026552\|Ga0209577_10332262	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300027174\|Ga0207948_1042778	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300027576\|Ga0209003_1002525	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300027604\|Ga0208324_1111991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300027706\|Ga0209581_1152874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300027854\|Ga0209517_10742976	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300027875\|Ga0209283_10123732	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300030294\|Ga0311349_10179608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1991	Open in IMG/M
3300030707\|Ga0310038_10371241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1158747	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031753\|Ga0307477_10169651	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300031753\|Ga0307477_10803038	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031754\|Ga0307475_11060193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300031795\|Ga0318557_10103786	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300031820\|Ga0307473_11512181	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031823\|Ga0307478_11219422	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031910\|Ga0306923_10798816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300031954\|Ga0306926_11157385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300031962\|Ga0307479_10354162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1451	Open in IMG/M
3300032089\|Ga0318525_10671183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300032180\|Ga0307471_103641696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032261\|Ga0306920_101328347	All Organisms → cellular organisms → Bacteria → Acidobacteria	1033	Open in IMG/M
3300032783\|Ga0335079_10579487	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300032892\|Ga0335081_10041446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7304	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Plants	Host-Associated → Plants	6.73%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Sediment	Environmental → Aquatic → Sediment	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.08%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Sand	Environmental → Terrestrial → Soil → Sand	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103660272	3300001356	Peatlands Soil	NGANGCIDCQGGTNGQITDIEAGTSMRALQFALRFDF*
JGI12627J18819_100047865	3300001867	Forest Soil	FSQNNGANGCVDCPGGNNGKITALEGGTHMRQLEFAVRLEF*
JGI25616J43925_100006501	3300002917	Grasslands Soil	VYAFSGNNGANPCIDCQGGNNGKITGLEGGTEMRALQFALRLSF*
Ga0066395_108700522	3300004633	Tropical Forest Soil	PVYAFSANNGANGCVDCQGGNNGKITGLEGGTNMRALQFAIRFDF*
Ga0066677_104404201	3300005171	Soil	YAFSANNGANGCVDCQGGNNGKITGLEGGTNMRQLQFALRFDF*
Ga0066688_101407612	3300005178	Soil	VFNHPVYAFSANNGGNTCVDCQGGNNGKITGLEGGTNMRQIQFALRFDF*
Ga0066675_106469312	3300005187	Soil	HPVYAFSQNNGANGCIDCQGGNNGKITSLESGTTMRQLQFAIRLDF*
Ga0066388_1004549931	3300005332	Tropical Forest Soil	LMNAFNIFNHPVYAFSQNNGANGCVDCQGGNNGKITGLEGGTHMRQLEFAVRFEF*
Ga0066388_1012295791	3300005332	Tropical Forest Soil	KFLMNAFNIFNHPVYAFSQNNGANGCVDCQGGNNGKITGLEGGTHMRQLEFALRFEF*
Ga0068868_1018855041	3300005338	Miscanthus Rhizosphere	FSANNGANGCVDCQGGNNGKITGLEGGTTMRQLQFAIRFDF*
Ga0070692_112909991	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PVYAFSANNGANGCVDCQGGNNGKITGLEGGTTMRQLQFAIRFDF*
Ga0070699_1004790181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FRTDFFNIFNHPVYAFGATNGAQTCIDCQGGNNGKITQLEYGSSMRQIQFALRFDF*
Ga0070731_103289091	3300005538	Surface Soil	PVYAFSQNNGANGCIDCQGGNNGKITALENGTTMRQLQFAIRFDF*
Ga0070696_1008772761	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VFNHPVYAFSQNNGANGCIDCQGGNNGKITALEGGTTMRQLQFAIRFDF*
Ga0066702_103044502	3300005575	Soil	FNHPVYAFSANNGANGCVDCQGGNNGKITGLEGGTNMRQLQFALRFDF*
Ga0070717_102071293	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ANNGAQTCIDCQGGNNGKITGLEGGTTMRELQFALRFDF*
Ga0066696_103396862	3300006032	Soil	FNHPVYAFSQNNGANGCIDCQGGNNGKITSLESGTTMRQLQFAIRLDF*
Ga0075021_107921691	3300006354	Watersheds	DAFNVFNHPVYNFSANSGANNCIDCQGGTNGKITDLEQGTRMRAIQWAVRFDF*
Ga0066660_108607981	3300006800	Soil	GANGCVDCQGGNNGKITGLEGGTSMRQLQFALRFDF*
Ga0099795_103597972	3300007788	Vadose Zone Soil	HPVYAFSQNNGANGCIDCQGGNNGKITALEGGTTMRQLQFAIRFDF*
Ga0099829_108574591	3300009038	Vadose Zone Soil	NGANGCIDCQGGNNGKITALEGGTTMRQLQFAIRFDF*
Ga0099829_114710571	3300009038	Vadose Zone Soil	PVYAFSANNGANNCINCLGGNNGKITSLEGGTSMRALQFAVRFDF*
Ga0099827_101213773	3300009090	Vadose Zone Soil	GGGRCIDCGGNNGKITDIEADTTMRQLQFALRFTF*
Ga0099792_110560781	3300009143	Vadose Zone Soil	RLSAQFRTDFFNIFNHPVYAFSANNGAQTCIDCSGGNNGKITGLEFGTTMRQIQFAVRLDF*
Ga0116222_14310462	3300009521	Peatlands Soil	NGCIDCQGGTNGQITDIEAGTSMRALQFALRFDF*
Ga0116218_12997591	3300009522	Peatlands Soil	ANGCIDCQGGTNGQITDIEAGTSMRALQFALRFDF*
Ga0126374_102227772	3300009792	Tropical Forest Soil	AKFLMNAFNIFNHPVYAFSQNNGANGCVDCQGGNNGKITGLEGGTHMRQLEFAVRFEF*
Ga0126373_109299641	3300010048	Tropical Forest Soil	HPVYAFSQNNGGNTCVDCQGGNNGKITNIEDGTSMRQLQFAIRFDF*
Ga0126376_126590362	3300010359	Tropical Forest Soil	VYAFSGNNGAQTCIDCQGGNNGKITNIEDTTSMRQLQFAIRLDF*
Ga0126372_115238911	3300010360	Tropical Forest Soil	GANTCIDCQGGNNGKITNIEDGTSMRQLQFAIRFDF*
Ga0126381_1029655561	3300010376	Tropical Forest Soil	FRMDAFNIFNHGVYAFSANNGAQTCIDCSGGNNGKITNLEDGTNMRQLQFAIRFDF*
Ga0126383_123799811	3300010398	Tropical Forest Soil	FNVFNHPVYAFSQNNGANGCIDCQGGTNGQITNLEYGSSMRQIQFSLRFDF*
Ga0134127_102625111	3300010399	Terrestrial Soil	FSANNGATTCIDCSGGNNGKITGLEGGTSMRQLQFAVRFDF*
Ga0138572_10199811	3300011077	Peatlands Soil	MDAFNVFNHPVFAFSGNNGANGCIDCQGGTNGQITDIEAGTSMR
Ga0137392_104559562	3300011269	Vadose Zone Soil	FNHPVYAFSANNGANNCIDCQGGNNGKITGLEGGTSMRGLQWALRFDF*
Ga0137391_109917362	3300011270	Vadose Zone Soil	AKFVFDAFNVFNHPVYAFSANNGANNCIDCQGGNNGKITGLEGGTSMRGLQWALRFDF*
Ga0137389_100509861	3300012096	Vadose Zone Soil	QNNGANGCIDCQGGNNGKITALEGGTTMRELQFAIRLDF*
Ga0137389_103823492	3300012096	Vadose Zone Soil	ANGCIDCQGGNNGKITALEGGTTMRELQFAIRLDF*
Ga0137382_105626471	3300012200	Vadose Zone Soil	HPVYAFSANNGANTCVDCPNATPDKNNGKITGLEGGTSMRQLQFGLRFDF*
Ga0137399_115587471	3300012203	Vadose Zone Soil	YAFSGNNGANPCIDCQGGNNGKITGLEGGTSMRALQFALRLTF*
Ga0137362_110467171	3300012205	Vadose Zone Soil	ANGCVDCPGGNNGKITALEGGTHMRQLEFAVRFEF*
Ga0137362_115245321	3300012205	Vadose Zone Soil	NHPVYAFSQNNGANGCIDCQGGNNGKITALESGSTMRQLQFAIRFDF*
Ga0137376_105662232	3300012208	Vadose Zone Soil	CNHRVYAFSGKNGANVCVDCQGGNNGKITDIEGGTTMRELQFALRLTF*
Ga0137366_103172272	3300012354	Vadose Zone Soil	FNHPVYAFSGNNGANGCVDCQGGNNGKITDIEGGTTMRELQFALRLNF*
Ga0137358_105603202	3300012582	Vadose Zone Soil	FNIFNHPVYAFSANNGANNCVDCQGGNNGKITQLEGGTTMRELQFALRLEF*
Ga0137395_106228102	3300012917	Vadose Zone Soil	ANGCIDCQGGNNGKITALESGSTMRQLQFAIRFDF*
Ga0137395_109206201	3300012917	Vadose Zone Soil	NGAQTCIDCSGGNNGKITQLEYGSSMRQVQFALRFDF*
Ga0137359_103089232	3300012923	Vadose Zone Soil	VFDAFNVFNHGVYAFSANNGANNCVDCGGDAGKIKGLEGGTSMRALQFAVRFDF*
Ga0137419_107961631	3300012925	Vadose Zone Soil	PVLAFSANNGANGCVDCQGGNNGKITGLEGGTNMRQLQFALRLEF*
Ga0137404_111196771	3300012929	Vadose Zone Soil	HPVYAFGATNGAQTCIDCQGGNNGKITQLEYGSSMRQIQFALRFDF*
Ga0137404_115235672	3300012929	Vadose Zone Soil	PVYAFGATNGAQTCIDCQGGNNGKITQLEYGSSMRQIQFALRFDF*
Ga0137407_110663732	3300012930	Vadose Zone Soil	NNGANTCVDCPNATPDKNNGKITGLEGGTTMRELQFGLRFDF*
Ga0137410_118823021	3300012944	Vadose Zone Soil	FNVFNHPVYAFSQNNGANGCIDCQGGNNGKITALESGTTMRQLQFAIRFDF*
Ga0126369_106720381	3300012971	Tropical Forest Soil	SQNNGANGCVDCQGGNNGKITGLEGGTHMRQIEFAVRFEF*
Ga0164305_119836031	3300012989	Soil	NAFNIFNHPVYAFSQNNGANGCVDCPGGNNGKITGLEGGTHMRQLEFAVRFEF*
Ga0157372_130434811	3300013307	Corn Rhizosphere	AFSANNGAQTCIDCQNVNGIGNNGRITGLEGGTNMRELQFALRFDF*
Ga0182019_103699042	3300014498	Fen	VFNHPVYAFSSNNNAGNSWNCIDCSSNNAGQIRGLEAGTSIRGLQWALRVDF*
Ga0182021_100136461	3300014502	Fen	NNGANNCVDCQGGNNGKITGLENGTSMRGLQFALRFNF*
Ga0157376_130724881	3300014969	Miscanthus Rhizosphere	GASTCIDCQGGNNGKITSLEGGTTMRQLQFAVRFDF*
Ga0132256_1000778754	3300015372	Arabidopsis Rhizosphere	GAQTCIDCQGGDNGKIKGLEGGTSMRQLQFAVRFDF*
Ga0132257_1040316541	3300015373	Arabidopsis Rhizosphere	RAEFVTDFFNIFNHPVYAFSANNGANGCVDCQGGTNGKITGLEGGTNMRQIQFALRFEF*
Ga0182032_120203102	3300016357	Soil	NVPVYAFSGNNGANPCIDCQGGNNGKITGLETPGAMRQLQFAIRVDF
Ga0182034_100699364	3300016371	Soil	AFNVFNHPVFAFSSNNGANPCVDCGGGNNGKITGLEGGSHMRQLEFAVRFEF
Ga0182034_116350422	3300016371	Soil	DAFNIFNHPVYAFSANNGAQTCIDCAVGSTGKISNIEDGTNMRELQFALRFDF
Ga0187778_100065991	3300017961	Tropical Peatland	SANNGANTCVDCPGGNNGKITGLEFGTTMRQLEFAVRFEF
Ga0187778_111544711	3300017961	Tropical Peatland	NGAGGCVDSCGGNNGKITGLEGGTHMRQLEFAVRFEF
Ga0187766_112359341	3300018058	Tropical Peatland	MNAYNIFNHPVYAFSQNNGANSCVDCPGGNNGKITGLEGGTHMRQLEFAVRFEF
Ga0066662_102194121	3300018468	Grasslands Soil	AFSANNGANGCVDCQGGNNGKITGLEGGTNMRQLQFALRFDF
Ga0193746_10137782	3300019870	Soil	MDAFNIFNPCLCVFSANNGAKQCIDCTGGTNGDITNLEYGTTMRELQFALRFDF
Ga0210399_109199101	3300020581	Soil	FGATNGAQTCIDCSGGNNGKITQLEYGSSMRQVQFALRFDF
Ga0210404_100334023	3300021088	Soil	FIVNAFNVFNHGVYAFSQNNGANGCVDCPGGNNGKITALEGGTHMRQIEFAVRFEF
Ga0210404_107789621	3300021088	Soil	NGANGCVDCQGGTNGKITALEGGTGMRQLQFALRFEF
Ga0210400_105855262	3300021170	Soil	RMDAFNVFNHPVYAFSGNNGANPCVDCQGGNNGRITDIEGGTTMRELQFALRLNF
Ga0210408_111530721	3300021178	Soil	NHPVYAFSANNGASTCIDCAAFDNKGNPTTIGKITNIEDGSSMRQLQFAIRLDF
Ga0210410_116694361	3300021479	Soil	FNHPVYAFSQNNGANGCIDCQGGNNGKITALESGSTMRQLQFAIRFDF
Ga0207701_101032934	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	YAFSANNGAQTCIDCQGGNNGKITGLEGGTSMRQLQFAVRFDF
Ga0207702_114299721	3300026078	Corn Rhizosphere	PVYAFSANNGAQTCIDCQGGDNGKIKGLEGGTSMRHFAFNAL
Ga0207683_1000370412	3300026121	Miscanthus Rhizosphere	SANNGAQTCIDCQGGNNGKITGLEGGTSMRQLQFAVRFDF
Ga0209473_10791251	3300026330	Soil	HPVYAFSQNNGANGCIDCQGGNNGKITSLESGTTMRQLQFAIRLDF
Ga0209805_11577622	3300026542	Soil	QNNGANGCVDCPGGNNGKITALEGGTHMRQLEFAVRFEF
Ga0209577_103322621	3300026552	Soil	ANNGAQTCIDCSGGNNGKITGLEFGTTMRQIQFAVRLDF
Ga0207948_10427781	3300027174	Forest Soil	FRAKFLMNAYNIFNHPVYAFSQNNGANGCVDCPGGNNGKITALEGGTHMRQLEFAVRLEF
Ga0209003_10025253	3300027576	Forest Soil	AFNIFNHPVYAFSQNNGANGCVDCQGGNNGKITALEGGTHMRQLEFAVRFEF
Ga0208324_11119911	3300027604	Peatlands Soil	FAFSGNNGANGCIDCQGGTNGQITDIEAGTSMRALQFALRFDF
Ga0209581_11528742	3300027706	Surface Soil	RMDAFNVFNHPVYAFSQNNGASTCIDCTNGTNGTNGFITGLEQGTNMRELQFALRFDF
Ga0209517_107429762	3300027854	Peatlands Soil	VFNHPVYAFSGNNGANPCIDCQGGTNGKITDIEGGTTMRELQFAIRFDF
Ga0209283_101237321	3300027875	Vadose Zone Soil	FNHPVYAFSGNNGANPCIDCQGGNNGKITGLEGGTEMRALQFALRLSF
Ga0311349_101796081	3300030294	Fen	ANNCIDCQGGNNGKITGLEGGTSMRALQFAVRFDF
Ga0310038_103712411	3300030707	Peatlands Soil	NGANGCIDCQGGTNGQITDIEAGTSMRALQFALRFDF
(restricted) Ga0255311_11587471	3300031150	Sandy Soil	YAFSQNNGANGCIDCQGGNNGKITSLEGGTTMRQLQFAIRFDF
Ga0307477_101696511	3300031753	Hardwood Forest Soil	VYAFSQNNGANGCVDCPGGNNGKITALEGGTHMRQLEFAVRLEF
Ga0307477_108030382	3300031753	Hardwood Forest Soil	YAFSANNGANNCVDCQGGNNGKITGLEGGTHMRQIEFAVRLEF
Ga0307475_110601931	3300031754	Hardwood Forest Soil	NGANGCVDCQGGTNGQITDIEAGTSMRALQFAIRFNF
Ga0318557_101037861	3300031795	Soil	FLMNAFNVFNHPVFAFSSNNGANPCVDCGGGNNGKITGLEGGSHMRQLEFAVRFEF
Ga0307473_115121812	3300031820	Hardwood Forest Soil	NLFNHPVYAFSANNGANNCVDCQNATADGNNGKITGLEGGTNMRQIQFALRLDF
Ga0307478_112194221	3300031823	Hardwood Forest Soil	TERFKAKFLVNAFNIFNHPVYAFSANNGANNCVDCQGGNNGKITGLEGGTHMRQIEFAVRLEF
Ga0306923_107988161	3300031910	Soil	FRMDAFNIFNHPVYAFSANNGAQTCIDCAVGSTGKISNIEDGTNMRELQFALRFDF
Ga0306926_111573851	3300031954	Soil	NNGANPCIDCQGGNNGKITGLETPGAMRQLQFAIRVDF
Ga0307479_103541623	3300031962	Hardwood Forest Soil	NHPVYAFSQNNGANGCIDCQGGNNGKITALEGGTTMRELQFAIRLDF
Ga0318525_106711832	3300032089	Soil	SSNNGANPCVDCGGGNNGKITGLEGGSHMRQLEFAVRFEF
Ga0307471_1036416962	3300032180	Hardwood Forest Soil	NHPVFAFSANNGANGCVDCQGGNNGKITALEGGTSMRQLQFALRFDF
Ga0306920_1013283471	3300032261	Soil	FSANNGAQTCIDCAVGSTGKISNIEDGTNMRELQFALRFDF
Ga0335079_105794872	3300032783	Soil	ANSANNGAQTCIDCSGGNNGKITNLEDGTSMRQLQFAIRFDF
Ga0335081_100414461	3300032892	Soil	FNHPVYAFSANNGAQTCIDCSGGNNGKITNLEDGTTMRQLQFAIRFDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters