Metagenome Family F098263

Basic Information
Family ID	F098263
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	59 residues
Representative Sequence	MIAIMMCDDCDMQMEEVFTAQENFRLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQEGRG
Number of Associated Samples	67
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.54 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	79.81 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (41.346 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (44.231 % of family members)
Environment Ontology (ENVO)	Unclassified (54.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (56.731 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1QL_na_1219620 2BBAY94_100185616 3BBAY93_101323052 4JGI11705J14877_100612605 5JGI11772J19994_10076564 6JGI11772J19994_10346551 7GOS2229_10119781 8Ga0068514_10055113 9Ga0068514_10140552 10Ga0068514_10501051 11Ga0074242_1044461216 12Ga0074242_107410752 13Ga0074648_100493222 14Ga0070729_103135181 15Ga0074647_10043201 16Ga0074647_10095171 17Ga0074649_10097932 18Ga0074649_10244357 19Ga0074649_10250926 20Ga0074649_10410501 21Ga0070749_100866143 22Ga0070749_101023101 23Ga0070749_101872561 24Ga0070749_102455131 25Ga0070749_105829142 26Ga0070749_106753262 27Ga0070754_104910641 28Ga0075477_100221137 29Ga0070750_100153712 30Ga0070746_101290152 31Ga0070746_103605613 32Ga0075460_102570161 33Ga0075460_103023301 34Ga0070745_11756952 35Ga0070752_13495331 36Ga0099847_10098802 37Ga0099847_10567442 38Ga0099848_10207946 39Ga0099848_11362452 40Ga0099850_11356122 41Ga0075480_105122801 42Ga0102960_12997192 43Ga0102963_10684492 44Ga0102963_12589132 45Ga0118657_125560092 46Ga0123573_102311075 47Ga0123573_104165042 48Ga0123573_109683011 49Ga0123573_112921472 50Ga0129345_10052448 51Ga0136655_10349501 52Ga0136655_11870321 53Ga0129324_102953782 54Ga0136851_118123671 55Ga0118733_10003599624 56Ga0118733_1047456483 57Ga0151677_11244672 58Ga0180437_102153363 59Ga0180437_106006593 60Ga0180431_106651432 61Ga0180431_107052041 62Ga0180436_111139511 63Ga0180434_105959163 64Ga0180433_107804721 65Ga0180433_108296282 66Ga0181559_106363162 67Ga0181563_104071422 68Ga0222719_1000071213 69Ga0212030_10145112 70Ga0212027_10540191 71Ga0196903_10394023 72Ga0212031_10418162 73Ga0196899_10553512 74Ga0196905_100402712 75Ga0196905_10301203 76Ga0196905_11636841 77Ga0196901_11061551 78Ga0196901_12255173 79Ga0210003_12962412 80Ga0208161_10912511 81Ga0208160_10266264 82Ga0208795_10934952 83Ga0208898_10169402 84Ga0208898_10395714 85Ga0208019_11829991 86Ga0208767_10360514 87Ga0208542_11685302 88Ga0208644_10219549 89Ga0208644_10955591 90Ga0208644_11175464 91Ga0208644_13347442 92Ga0208644_13908032 93Ga0209953_10264794 94Ga0209692_1000145720 95Ga0209692_102965312 96Ga0209536_1008109212 97Ga0135227_10439551 98Ga0135266_1000332 99Ga0135266_1095883 100Ga0307376_108338002 101Ga0307375_103256123 102Ga0307377_102167251 103Ga0348335_007022_1827_2000 104Ga0348335_078842_920_1090
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1QL_na_1219620 2BBAY94_100185616 3BBAY93_101323052 4JGI11705J14877_100612605 5Ga0074242_1044461216 6Ga0070729_103135181 7Ga0070749_101872561 8Ga0070749_102455131 9Ga0070749_106753262 10Ga0070746_103605613 11Ga0075460_102570161 12Ga0070745_11756952 13Ga0102960_12997192 14Ga0136655_11870321 15Ga0118733_1047456483 16Ga0180436_111139511 17Ga0222719_1000071213 18Ga0196901_12255173 19Ga0209953_10264794
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0102963_10684492 2QL_na_1219620 3BBAY94_100185616 4BBAY93_101323052 5JGI11772J19994_10076564 6Ga0068514_10055113 7Ga0074242_1044461216 8Ga0070729_103135181 9Ga0070749_101023101 10Ga0075460_103023301 11Ga0075480_105122801 12Ga0102960_12997192 13Ga0118657_125560092 14Ga0123573_102311075 15Ga0136655_11870321 16Ga0129324_102953782 17Ga0180431_106651432 18Ga0181559_106363162 19Ga0222719_1000071213 20Ga0196905_100402712 21Ga0196905_10301203 22Ga0208161_10912511 23Ga0208767_10360514 24Ga0209953_10264794 25Ga0209692_102965312 26Ga0135266_1095883 27Ga0307376_108338002 28Ga0307375_103256123
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 15.91% Coil/Unstructured: 84.09%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11753	DUF3310	43.27
PF05766	NinG	11.54
PF14090	HTH_39	4.81
PF12850	Metallophos_2	3.85
PF00959	Phage_lysozyme	1.92
PF04851	ResIII	0.96
PF13479	AAA_24	0.96
PF13385	Laminin_G_3	0.96
PF09588	YqaJ	0.96
PF13936	HTH_38	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	36.54 %
Unclassified	root	N/A	41.35 %
Viruses	superkingdom	All Organisms → Viruses	22.12 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	8.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	8.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.27 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Unclassified	root	N/A	41.35 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	8.65 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	2.88 %
Unclassified	root	N/A	41.35 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	2.88 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.88 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.88 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.88 %
Unclassified	root	N/A	41.35 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.88 %
Unclassified	root	N/A	41.35 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2022920000\|QLn_FQAYR3Y02TN7MB	Not Available	515	Open in IMG/M
3300000949\|BBAY94_10018561	Not Available	1942	Open in IMG/M
3300000973\|BBAY93_10132305	Not Available	630	Open in IMG/M
3300001419\|JGI11705J14877_10061260	All Organisms → Viruses → Predicted Viral	1233	Open in IMG/M
3300001748\|JGI11772J19994_1007656	All Organisms → Viruses → Predicted Viral	1957	Open in IMG/M
3300001748\|JGI11772J19994_1034655	Not Available	646	Open in IMG/M
3300001963\|GOS2229_1011978	All Organisms → Viruses → Predicted Viral	1782	Open in IMG/M
3300004941\|Ga0068514_1005511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1294	Open in IMG/M
3300004941\|Ga0068514_1014055	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300004941\|Ga0068514_1050105	Not Available	512	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	1.92%
Aquatic	Environmental → Aquatic	95.19%
Terrestrial	Environmental → Terrestrial	2.88%

Habitat	Taxonomy	Distribution
Green Algae	Host-Associated → Algae → Green Algae	1.92%
Marine	Environmental → Aquatic → Marine	66.35%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	24.04%
Sediment	Environmental → Aquatic → Sediment	4.81%
Soil	Environmental → Terrestrial → Soil	2.88%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	2.88%
Coastal	Environmental → Aquatic → Marine → Coastal	53.85%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.92%
Harbor	Environmental → Aquatic → Marine → Harbor	2.88%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	7.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.88%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.88%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.92%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	16.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.88%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.92%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	7.69%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	6.73%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	4.81%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.92%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	49.04%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.88%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	44.23%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.96%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.85%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	7.69%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.92%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	4.81%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.96%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.96%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	2.88%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	4.81%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.96%
Marine Water	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water	2.88%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	3.85%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	6.73%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.88%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	1.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.88%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2022920000	Saline water microbial communities from Qinghai Lake, Tibetan Plateau - High mountain lake (unassembled)	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300004941	Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2um	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005589	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
QL_na_1219620	2022920000	Saline Water	DCDTQMQEALRIGNFKLKGWVCPSCLHFAKAIGRERQLTIEXKKMXKERRVTSGSQT
BBAY94_100185616	3300000949	Macroalgal Surface	MIAIMICDDCNQQMTEIFTASENFKLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQVVQ*
BBAY93_101323052	3300000973	Macroalgal Surface	MVCDDCDQQMTEIFTASENFRLKGWMCEACFQFAPAIGREKKLTLDDKDETNGHTPRCS*
JGI11705J14877_100612605	3300001419	Saline Water And Sediment	VIAIMMCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
JGI11772J19994_10076564	3300001748	Saline Water And Sediment	VIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
JGI11772J19994_10346551	3300001748	Saline Water And Sediment	MCDDCDVQMQEVFTASENFRLKGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
GOS2229_10119781	3300001963	Marine	VIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV*
Ga0068514_10055113	3300004941	Marine Water	MIAIMICDDCNQQMTEIFTATENFRLKGWMCEGCLTFAPAIGREKKWTMEDKDGDTKGCSGQMVQ*
Ga0068514_10140552	3300004941	Marine Water	MIAIMICDDCDQQMTEIFTASENFRLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQTLQ*
Ga0068514_10501051	3300004941	Marine Water	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGCSGQMVQ*
Ga0074242_1044461216	3300005346	Saline Water And Sediment	VIAIMICDDCDEQMQEVFTASENFKTQGLECVSPVYTSSPAIGRERGYTKNDFEEKDKNDSRAC*
Ga0074242_107410752	3300005346	Saline Water And Sediment	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLIFAPAVGREKKWTMEDKDGDQEGCVRQTLQ*
Ga0074648_100493222	3300005512	Saline Water And Sediment	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLIFAPAIGREKKWTMEDKDGDTQGRSGQMVQ*
Ga0070729_103135181	3300005589	Marine Sediment	MIAIMVCDDCDQQMTEVFNASENRLKGWMCESCLEFVPAIGRERNYKMD
Ga0074647_10043201	3300005611	Saline Water And Sediment	VIAIMMCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERLFTIE
Ga0074647_10095171	3300005611	Saline Water And Sediment	VIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERLFTIE
Ga0074649_10097932	3300005613	Saline Water And Sediment	MIAIMVCDDCNQQMTEIFTATENFRLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQVVQ*
Ga0074649_10244357	3300005613	Saline Water And Sediment	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQMVQ*
Ga0074649_10250926	3300005613	Saline Water And Sediment	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGCSGQVVQ*
Ga0074649_10410501	3300005613	Saline Water And Sediment	VIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIKDKKDDKKRSV
Ga0070749_100866143	3300006802	Aqueous	MIALMICDDCNQQMTEVFTAQENFKLKGWMCESCFHFAPAIGRENKWTLEDKDGDQEGRSGQVV*
Ga0070749_101023101	3300006802	Aqueous	VIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPICLHFAKAIGRERQLTIEDKKDDKKRGV
Ga0070749_101872561	3300006802	Aqueous	ICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRG*
Ga0070749_102455131	3300006802	Aqueous	MIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTED
Ga0070749_105829142	3300006802	Aqueous	VIAIMMCDDCDVQMQEVFTASENFRLKGWMCESCLHFAKAIGRERQLTIEDKKDDKKRSV
Ga0070749_106753262	3300006802	Aqueous	MIAIMMCDECDMQMEEVFTAQENFKLKGWMCPTCLHFAPAIGREKQWTMEDKDGDQKGRC
Ga0070754_104910641	3300006810	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0075477_100221137	3300006869	Aqueous	VIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV*
Ga0070750_100153712	3300006916	Aqueous	MIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPR
Ga0070746_101290152	3300006919	Aqueous	MIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRP
Ga0070746_103605613	3300006919	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREK
Ga0075460_102570161	3300007234	Aqueous	MICDECNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV*
Ga0075460_103023301	3300007234	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFTPAIGREKKWTMEDKDGDSKIDSGQMV*
Ga0070745_11756952	3300007344	Aqueous	MIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCLHFAPAIGRERGFTIEDKAKTEDDRRAS*
Ga0070752_13495331	3300007345	Aqueous	RKGDSKMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0099847_10098802	3300007540	Aqueous	MIAIMMCDDCDMQMEEVFTAQENFKLKGWICPSCLHFAPAIGRERGFTIEDKAKTEDDRRVG*
Ga0099847_10567442	3300007540	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDRDG
Ga0099848_10207946	3300007541	Aqueous	MICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV*
Ga0099848_11362452	3300007541	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVVQ*
Ga0099850_11356122	3300007960	Aqueous	MCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV*
Ga0075480_105122801	3300008012	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0102960_12997192	3300009000	Pond Water	MIAIMMCDDCDVQMEEVFSAEHNFHLKGWLCPQCRHFAPTIGREKWFTMDDKDDRNQTDDSR*
Ga0102963_10684492	3300009001	Pond Water	MIAIMMCDDCDMQMEEVFTAQENFRLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQEGRG
Ga0102963_12589132	3300009001	Pond Water	MIALMICDDCNQQMTEVFTAQENFKLKGWMCESCFHFAPAIGREKKWTMEDRDGDQEGRS
Ga0118657_125560092	3300009506	Mangrove Sediment	GMIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCMHFAPAIGREKGWTINDQTQTENDSRAS*
Ga0123573_102311075	3300009509	Mangrove Sediment	MIALMICDDCNQQMTEIFTASENFKLKGWMCESCFHFAPAIGRENKFTMEDKDGDSKGRSGQVV*
Ga0123573_104165042	3300009509	Mangrove Sediment	MIALMICDDCNQQMTEIFTAQNDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQKGRSGQVVQ*
Ga0123573_109683011	3300009509	Mangrove Sediment	MICDDCDQQMTEIFTASENFRLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQTLQ*
Ga0123573_112921472	3300009509	Mangrove Sediment	MIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCMHFAPAIGREKGWTINDQTQTENDSRAS*
Ga0129345_10052448	3300010297	Freshwater To Marine Saline Gradient	MICDDCNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV*
Ga0136655_10349501	3300010316	Freshwater To Marine Saline Gradient	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTME
Ga0136655_11870321	3300010316	Freshwater To Marine Saline Gradient	NVIAIMMCDDCDTQMQEVFTAQENFRLKGWLCPSCLHFAPAIGRERGFTKDDFEEKED*
Ga0129324_102953782	3300010368	Freshwater To Marine Saline Gradient	MIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCLHFAPAIGRERGFTIEDKAKTEDDRRVG*
Ga0136851_118123671	3300010413	Mangrove Sediment	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDK
Ga0118733_10003599624	3300010430	Marine Sediment	MIAIMVCDDCDQQMTEVFNASENRLKGWMCESCLEFVPAIGRER
Ga0118733_1047456483	3300010430	Marine Sediment	MVCDDCDTQMEEIFTAQENFKLKGWMCPSCLNFAPAIGREKKWQLDDKERRDGDKA
Ga0151677_11244672	3300011258	Marine	MCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIKDKKDDKKRSV*
Ga0180437_102153363	3300017963	Hypersaline Lake Sediment	VIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENDK
Ga0180437_106006593	3300017963	Hypersaline Lake Sediment	VIAIMMCDDCDTQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGN
Ga0180431_106651432	3300017987	Hypersaline Lake Sediment	VIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENDKKRSV
Ga0180431_107052041	3300017987	Hypersaline Lake Sediment	AIMMCDDCDVQMQEVFTASENFKLKGWLCESCLHFAPAIGRERGLTKDDFEEKNKDDSRA
Ga0180436_111139511	3300017990	Hypersaline Lake Sediment	RSGNVIAIMMCDDCDVQMQEVFTASENFKLKGWMCESCLHFSPAIGRERGFTKDDFEEKNKDDSRAG
Ga0180434_105959163	3300017991	Hypersaline Lake Sediment	MIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERQFTIEDKESDKKRSV
Ga0180433_107804721	3300018080	Hypersaline Lake Sediment	VIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTI
Ga0180433_108296282	3300018080	Hypersaline Lake Sediment	VIAIMMCDDCDVQMQEVFTASENFKLKGWMCESCLHFSPAIGRERGFTKDDFEEKNKDDSRAG
Ga0181559_106363162	3300018415	Salt Marsh	MIAIMMCDDCDMQMEEVFTAQENMRLKGWMCPTCLHFAPAIGRERGWTVDDKAKDDSRSG
Ga0181563_104071422	3300018420	Salt Marsh	MIAIMMCDDCDMQMEEVFTAQENFKLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQKGRG
Ga0222719_1000071213	3300021964	Estuarine Water	MIALMICEECNNQMTEIFTAQEDMKLKGWMCESCLTFVPAIGREKKFTIEDQAPQRSE
Ga0212030_10145112	3300022053	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDRDGDQEGRS
Ga0212027_10540191	3300022168	Aqueous	VIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGIYLFL
Ga0196903_10394023	3300022169	Aqueous	VIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDK
Ga0212031_10418162	3300022176	Aqueous	MIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDV
Ga0196899_10553512	3300022187	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRC
Ga0196905_100402712	3300022198	Aqueous	MIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPC
Ga0196905_10301203	3300022198	Aqueous	MIALMICDDCNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV
Ga0196905_11636841	3300022198	Aqueous	MIALMICDDCNQQMTEVFTAQENFKLKGWMCEGCFHFAPAIGRENKWTLEDK
Ga0196901_11061551	3300022200	Aqueous	VIAIMMCDDCDTQMQEVFTAQENFRLKGWVCPSCLHFAKAIGRERQLTIEDKADD
Ga0196901_12255173	3300022200	Aqueous	VIAIMICDDCDTQMQEVFTAQENFRLKGWVCPSCLHFAKAIGRERQLTIK
Ga0210003_12962412	3300024262	Deep Subsurface	VIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRAG
Ga0208161_10912511	3300025646	Aqueous	MIALMICDDCNQQMTEVFTAQENFKLKGWMCEGCFHFAPAIGRENKWTLEDKDGDQEGRG
Ga0208160_10266264	3300025647	Aqueous	VIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV
Ga0208795_10934952	3300025655	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRSGQVVQ
Ga0208898_10169402	3300025671	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV
Ga0208898_10395714	3300025671	Aqueous	MIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFTPAIGRERLFTQNDKKEDDSRPC
Ga0208019_11829991	3300025687	Aqueous	RNPQNDSEAEMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPC
Ga0208767_10360514	3300025769	Aqueous	VIAIMMCDDCDTQMQEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKEDDDGDQTGSV
Ga0208542_11685302	3300025818	Aqueous	MIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLHFTPAIGRERLFTQNDKTEDDSRSS
Ga0208644_10219549	3300025889	Aqueous	MIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLNFTPAIGRERLFTQNDKTEDDSRPR
Ga0208644_10955591	3300025889	Aqueous	MIALMICDDCNQQMTEIFTAQDNFKLKGWMCESCFHFAPAIGRENKWTLEDK
Ga0208644_11175464	3300025889	Aqueous	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRG
Ga0208644_13347442	3300025889	Aqueous	VIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRAS
Ga0208644_13908032	3300025889	Aqueous	MIAIMMCDECDTQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDIRPR
Ga0209953_10264794	3300026097	Pond Water	VIATMTCDDCNEPMQTVFTAQENFRLKGWMCPSCLCFTPAIGREHKFTIEDEENGDQK
Ga0209692_1000145720	3300027828	Marine Sediment	MIAIMVCDDCDTQMEEIFTAQENFKLKGWMCPVCLNFAPAIGREKKWQLDDKERRDGDKA
Ga0209692_102965312	3300027828	Marine Sediment	VIAIMVCDDCDTQMEEIFTAQENFKLKGWMCPSCLNFAPAIGREKKWQLDDKEKRDGDKA
Ga0209536_1008109212	3300027917	Marine Sediment	MIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRG
Ga0135227_10439551	3300029302	Marine Harbor	MIAIMICDDCNQQMTEIFTASENFRLKGWMCEACFNFAPAIGREKTWTMEDKDGDQEGCSRQVVQ
Ga0135266_1000332	3300029632	Marine Harbor	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQMVQ
Ga0135266_1095883	3300029632	Marine Harbor	MIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDQEGCVRQALQ
Ga0307376_108338002	3300031578	Soil	VIAIMICDDCDVQMQEIFTASQNFRLKGWMCESCLHFAPAIGRERGYSKDDFEEKDKDDSWAS
Ga0307375_103256123	3300031669	Soil	VIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRVG
Ga0307377_102167251	3300031673	Soil	VIAIMICDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKQDD
Ga0348335_007022_1827_2000	3300034374	Aqueous	MMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV
Ga0348335_078842_920_1090	3300034374	Aqueous	MICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098263

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences