Metagenome Family F098243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098243
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	82 residues
Representative Sequence	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAA
Number of Associated Samples	42
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.54 %
% of genes near scaffold ends (potentially truncated)	16.35 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.308 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (39.423 % of family members)
Environment Ontology (ENVO)	Unclassified (69.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.077 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120 1INPgaii200_08708061 2INPgaii200_08720671 3AF_2010_repII_A1DRAFT_100034013 4JGI1027J12803_1023651001 5F14TB_1028216481 6Ga0066398_100424392 7Ga0066395_103161402 8Ga0066395_104217571 9Ga0065707_110081611 10Ga0066388_1004686823 11Ga0066388_1004957161 12Ga0066388_1017755091 13Ga0066388_1018267222 14Ga0066388_1023207132 15Ga0066388_1028199041 16Ga0066388_1049457042 17Ga0066388_1056413221 18Ga0066388_1068592581 19Ga0066905_1000777674 20Ga0066905_1001221983 21Ga0066905_1008674151 22Ga0066903_1007411642 23Ga0066903_1007578682 24Ga0066903_1011642803 25Ga0066903_1012594892 26Ga0066903_1018774862 27Ga0066903_1024669311 28Ga0066903_1031939522 29Ga0066903_1035153792 30Ga0066903_1038814903 31Ga0066903_1045149292 32Ga0066903_1054523281 33Ga0066903_1081792182 34Ga0066903_1084439012 35Ga0075417_100272282 36Ga0075428_1000218347 37Ga0075428_1005093903 38Ga0075428_1008441722 39Ga0075421_1004650903 40Ga0075421_1014140061 41Ga0075421_1020670661 42Ga0075431_1016708611 43Ga0075429_1010089872 44Ga0075436_1008610071 45Ga0075419_107084461 46Ga0075419_107789151 47Ga0111539_114828901 48Ga0075418_117840551 49Ga0075418_118151571 50Ga0114129_102959973 51Ga0114129_121266711 52Ga0126380_101487841 53Ga0126380_105691681 54Ga0126380_107915842 55Ga0126384_104883432 56Ga0126384_106664842 57Ga0126384_109814292 58Ga0126384_118029791 59Ga0126384_121120651 60Ga0126382_103598702 61Ga0126382_105892912 62Ga0126382_106296902 63Ga0126382_106541551 64Ga0126382_119042622 65Ga0126370_109540422 66Ga0126370_112066751 67Ga0126376_116496062 68Ga0126376_125255001 69Ga0126372_104049102 70Ga0126372_114161061 71Ga0126372_117433901 72Ga0126372_127098842 73Ga0126378_106992492 74Ga0126377_100453212 75Ga0126377_122162311 76Ga0126379_121576232 77Ga0126379_128066811 78Ga0126379_134993361 79Ga0126381_1007580032 80Ga0126381_1013803481 81Ga0126383_109477452 82Ga0126383_111329151 83Ga0126383_113672391 84Ga0126383_118905182 85Ga0126383_120233661 86Ga0126383_132174641 87Ga0126383_132496131 88Ga0137367_105758841 89Ga0137366_104170782 90Ga0126375_106590261 91Ga0126375_112877302 92Ga0126375_119470821 93Ga0126369_133221672 94Ga0132258_128601352 95Ga0132258_133062412 96Ga0132255_1030921602 97Ga0126371_120327001 98Ga0209814_101253342 99Ga0209465_100111002 100Ga0209465_100124805 101Ga0209481_107451391 102Ga0209382_109092352 103Ga0209382_111502051 104Ga0209382_115762721
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120 1INPgaii200_08708061 2AF_2010_repII_A1DRAFT_100034013 3F14TB_1028216481 4Ga0066398_100424392 5Ga0066395_103161402 6Ga0066388_1004686823 7Ga0066388_1018267222 8Ga0066388_1023207132 9Ga0066388_1056413221 10Ga0066905_1001221983 11Ga0066903_1007411642 12Ga0066903_1081792182 13Ga0075421_1020670661 14Ga0126370_109540422 15Ga0126383_132174641
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1Ga0075421_1014140061 2Ga0066398_100424392 3Ga0066388_1004686823 4Ga0066388_1028199041 5Ga0066388_1049457042 6Ga0066388_1056413221 7Ga0066903_1007411642 8Ga0066903_1007578682 9Ga0066903_1018774862 10Ga0066903_1038814903 11Ga0075421_1020670661 12Ga0075419_107789151 13Ga0126380_105691681 14Ga0126380_107915842 15Ga0126382_103598702 16Ga0126372_127098842 17Ga0126379_121576232 18Ga0126379_128066811 19Ga0126383_132174641 20Ga0126383_132496131 21Ga0137366_104170782 22Ga0126375_106590261 23Ga0126375_119470821 24Ga0126369_133221672 25Ga0132255_1030921602 26Ga0209481_107451391 27Ga0209382_111502051
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.15% Coil/Unstructured: 78.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02687	FtsX	5.77
PF04239	DUF421	2.88
PF03928	HbpS-like	1.92
PF12833	HTH_18	1.92
PF00072	Response_reg	0.96
PF12852	Cupin_6	0.96
PF02563	Poly_export	0.96
PF04366	Ysc84	0.96
PF03551	PadR	0.96
PF12728	HTH_17	0.96

Showing 1 to 10 of 15 entries

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COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	2.88
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.96
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.69 %
Unclassified	root	N/A	67.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	32.69 %
Unclassified	root	N/A	67.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.69 %
Unclassified	root	N/A	67.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Unclassified	root	N/A	67.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Unclassified	root	N/A	67.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.46 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Unclassified	root	N/A	67.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.46 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Unclassified	root	N/A	67.31 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0870806	Not Available	625	Open in IMG/M
2228664022\|INPgaii200_c0872067	Not Available	508	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10003401	All Organisms → cellular organisms → Bacteria → Acidobacteria	4315	Open in IMG/M
3300000955\|JGI1027J12803_102365100	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300001431\|F14TB_102821648	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300004268\|Ga0066398_10042439	Not Available	887	Open in IMG/M
3300004633\|Ga0066395_10316140	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300004633\|Ga0066395_10421757	Not Available	756	Open in IMG/M
3300005295\|Ga0065707_11008161	Not Available	527	Open in IMG/M
3300005332\|Ga0066388_100468682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1899	Open in IMG/M

Showing 1 to 10 of 104 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.96%
Host-Associated	Host-Associated	24.04%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	24.04%
Terrestrial	Environmental → Terrestrial	75.96%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.15%
Soil	Environmental → Terrestrial → Soil	75.96%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	29.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	28.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	39.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	28.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 42 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08708061	2228664022	Soil	MPHFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT
INPgaii200_08720671	2228664022	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT
AF_2010_repII_A1DRAFT_100034013	3300000597	Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
JGI1027J12803_1023651001	3300000955	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDT*
F14TB_1028216481	3300001431	Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEEXXXXXXXXXXXTHVVLTDTETHEKAASLGSQGETDLKRKP*
Ga0066398_100424392	3300004268	Tropical Forest Soil	MPCFAIGERVALKGLLGELHGGEAIGTVVFIAPDRHGMEEFDEYEIAFEDSRQLLVSSFQLTHVVLTDDGRYEKAANRGSQFVADPRKKVLTPTR*
Ga0066395_103161402	3300004633	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETRP*
Ga0066395_104217571	3300004633	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0065707_110081611	3300005295	Switchgrass Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHQEAASLDSQGETDLRREH*
Ga0066388_1004686823	3300005332	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTIVLVAPDRHGMDVFDEYEIAFEDSRRLRVRSFQLTHIGPTDDKHEEAPNLLSQSETDLGRKPT*
Ga0066388_1004957161	3300005332	Tropical Forest Soil	IGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRIRSFQLTHVVLTDDRKPERAASLGSQCETDLGC*
Ga0066388_1017755091	3300005332	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSKGEKTLG*
Ga0066388_1018267222	3300005332	Tropical Forest Soil	MRRFAIGDLVALNGLLGEINGEAIGTVVSIAPNEHGITALDEYEIAFEDSRQLRFCRFQLTHVRLNDDACSCRAVSSFSNKGM*
Ga0066388_1023207132	3300005332	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAMGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCETDLGC*
Ga0066388_1028199041	3300005332	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDSIGTVVSIEPDRHGMDAFDEYEIAFEDSRLLRVRSFQLTHVGQTDDKNHEKARK*
Ga0066388_1049457042	3300005332	Tropical Forest Soil	MPRFKIGERVALKGLLGELHGGEAIGTVVSIAPDRHGMDAFDEYEIAFEESRLLRFRSFQLTHVGLTDDKKHEKAESRSSQGRDRP*
Ga0066388_1056413221	3300005332	Tropical Forest Soil	MPRFKIGERVALKGLLREVHTGEAIGMVVSITPDRHGMDEFDEYEIAFEDSRQLRFRSFQLNPPSADRR*
Ga0066388_1068592581	3300005332	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMEEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFVADPRKKVLTPTR*
Ga0066905_1000777674	3300005713	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGEAIGTVVFIAPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVVLNDDERPETQASLGSQ
Ga0066905_1001221983	3300005713	Tropical Forest Soil	MDIRTAFDLECSYRFEVLSQMPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRVRSFQLTHVGLTDDKKHEEAPSLGSQGETDLGREPT*
Ga0066905_1008674151	3300005713	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRTLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0066903_1007411642	3300005764	Tropical Forest Soil	MPRFKIGERVALNGILGELHGEDAIGTVVSIEADVHGMDAFDEYEIAFEDSRQLRVRSFQLTHVALTNDKNHEKATSLGSQGESDVRRKPT*
Ga0066903_1007578682	3300005764	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRIRSFQLTHVVLTDDRKPERAASLGSQCETDLGC*
Ga0066903_1011642803	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRIRSFQLTHIVLTDDESHEKVSLGS*
Ga0066903_1012594892	3300005764	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHIVMTDTETHDEAASLDSQPETDLGRKH*
Ga0066903_1018774862	3300005764	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAVGTVISIEPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVWADRG*
Ga0066903_1024669311	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0066903_1031939522	3300005764	Tropical Forest Soil	MPRFAIGERVALKGLLGERHGGEAIAAVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFEADPRKKVLTPTR*
Ga0066903_1035153792	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAMGKVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0066903_1038814903	3300005764	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGKTIGTVVSIVPDRHGMDAFDEYDIAVEDSRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCETDLGC*
Ga0066903_1045149292	3300005764	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIAFENSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0066903_1054523281	3300005764	Tropical Forest Soil	MPRFKVGERVALNGLLGELHGPEAIGTVVFVAPDRHGMEAFDKYEIAFEDSRQLQVCSFQLTHVVIDRR*
Ga0066903_1081792182	3300005764	Tropical Forest Soil	MPRFKIGERVALKGLFREVLGEAIGTVVSIAPDSHGMDEFDEYEIAFGDSRQLRFRSFRLTHVVLTDNREARESGKPRFAK*
Ga0066903_1084439012	3300005764	Tropical Forest Soil	RVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0075417_100272282	3300006049	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGTRRSE*
Ga0075428_1000218347	3300006844	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE*
Ga0075428_1005093903	3300006844	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETDLRIKQ*
Ga0075428_1008441722	3300006844	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRRFQLTHIVLTEDESHEKASLGS*
Ga0075421_1004650903	3300006845	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0075421_1014140061	3300006845	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAA
Ga0075421_1020670661	3300006845	Populus Rhizosphere	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAQDRHGMDEFDEYEIAFEDSRRLRVRSFQLTHVVLTRWEVRESSEPRFAI*
Ga0075431_1016708611	3300006847	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHEEAASLDSQGETDLRREH*
Ga0075429_1010089872	3300006880	Populus Rhizosphere	PRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH*
Ga0075436_1008610071	3300006914	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGT
Ga0075419_107084461	3300006969	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE*
Ga0075419_107789151	3300006969	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0111539_114828901	3300009094	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGIDAFDKYEIAFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0075418_117840551	3300009100	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH*
Ga0075418_118151571	3300009100	Populus Rhizosphere	MPRFRIGERVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0114129_102959973	3300009147	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHIVLTDAETHEEAASLDSQGETDLRREH*
Ga0114129_121266711	3300009147	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0126380_101487841	3300010043	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGAAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRRFQLTHIVLTEESHEKASLSS*
Ga0126380_105691681	3300010043	Tropical Forest Soil	MPRFKIGERVALTGHLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRRFRLTQVGLTDHRKHERAASLGSPCETDLGC*
Ga0126380_107915842	3300010043	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVRLADDEKEEKAPSPGSQGEADPGRKPT*
Ga0126384_104883432	3300010046	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFADSRKLRVRRFQLTHIVLTDDESHEKASLGS*
Ga0126384_106664842	3300010046	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETTLG*
Ga0126384_109814292	3300010046	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRRFQLTHLGLTDDRKPERAAGLGSQCKTDLDC*
Ga0126384_118029791	3300010046	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDLRQLLRFRSFQLTHVGLIDD
Ga0126384_121120651	3300010046	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0126382_103598702	3300010047	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGEAIGTVVFIAPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVVLNDDERPETQASLGSQGDTDLRKKH*
Ga0126382_105892912	3300010047	Tropical Forest Soil	MPRFKIGERVALKGLLREVHSGEAIGMVVSITPDRHGMDEFDEYEIAFEDSRQLRFRSFQLNPPSADRR*
Ga0126382_106296902	3300010047	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRHLRVRSFQLTHVGLTDDKKHEEAPSLGSQGETDLGREPT*
Ga0126382_106541551	3300010047	Tropical Forest Soil	MPRFKIGERVALKGLLGELHGGEAIGTVVSIAPDRHGMDAFDEYEIAFKESRLLRFRSFQLNPPSADRR*
Ga0126382_119042622	3300010047	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGAAIGTVVFITPDRHGMDAFDEYEIAFEDSRQLRVRSFQLTHVGQTDDKNHEKARK*
Ga0126370_109540422	3300010358	Tropical Forest Soil	MFVEVRRFKSMPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHIVMTDTETHDEAASL
Ga0126370_112066751	3300010358	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRASQFEADPRKKVLTPTR*
Ga0126376_116496062	3300010359	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLAEDESHEKASLVFVGETHLGRKPT*
Ga0126376_125255001	3300010359	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGDSIGTVISIEPDRHGMDAFDKYGIAFEDSRQLRVRSFQLTHV
Ga0126372_104049102	3300010360	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLTHVVLTDDGRYEKAANRGSQFEADPRKKVLTPTR*
Ga0126372_114161061	3300010360	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAMGTVVSIVPDRHGMDAFDEYEIAFEDLRQLLRFRSFQLTHVGLTDDRKPERAASLGSQCNSDLGC*
Ga0126372_117433901	3300010360	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0126372_127098842	3300010360	Tropical Forest Soil	MPRFKLGERVALNGLLGELHGGEAIGTVVFVVPDRHGMDVFDEYGIAFEDSRQLRVRSFQLTHVVLTSMARS*
Ga0126378_106992492	3300010361	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGRVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS*
Ga0126377_100453212	3300010362	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVRLADDKKEEKAPSLGSQGETDLGIKPT*
Ga0126377_122162311	3300010362	Tropical Forest Soil	MPRFKIGERVALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERAASLGSQCETDLGC*
Ga0126379_121576232	3300010366	Tropical Forest Soil	MPRFKIGERVALNGVLGELHGGEAIGTVVLVAPDRHGMDVFDEYEIAFEDSRLLRFRGFQLTHVGLRDDKKHEKTGSLGSQGEIDL
Ga0126379_128066811	3300010366	Tropical Forest Soil	MPRFKIGERVALTGLLREVHEGATIGTVISIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERAASLGSHCETDLDC*
Ga0126379_134993361	3300010366	Tropical Forest Soil	MARFKIGERVALNGILGELHGEDAIGTVVSIEADVHGMDAFDEYEIAFEDSRQLRVRSFQLTHVALTN
Ga0126381_1007580032	3300010376	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVMLTDAETQKAASLASQSETDLGRKH*
Ga0126381_1013803481	3300010376	Tropical Forest Soil	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDESHEKVSLGS*
Ga0126383_109477452	3300010398	Tropical Forest Soil	GERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIAFEDSRKLRVRRFQLTHIVLTEDESHEKASLGS*
Ga0126383_111329151	3300010398	Tropical Forest Soil	MPRFAIGERVALKGLLGELHGGEAIATVVFIAPDRHGMDEFDEYEIAFEDSRQLRVRSFQLNHVVLTD
Ga0126383_113672391	3300010398	Tropical Forest Soil	MPRFKIGERVALTGLLREVLGGEAIGTVVSIVPDRHGMDAFDEYEIAFEGSRQLLRFRRFRLTHVGLTNDRKPERAASLGSQCETDLGC*
Ga0126383_118905182	3300010398	Tropical Forest Soil	MPRFKIGERVALKGLLREVHTGEAIGMVVSITPDRHGMDEFDEYDIAFEDSRQLRFRSFQLNPPSADRR*
Ga0126383_120233661	3300010398	Tropical Forest Soil	VALTGLLREVHGGETIGTVVSIVPDRHGMDAFDEYEIAFEDSRQLLRFRSFRLTHGGLTDDRQPERATSLGSHCETDLDC*
Ga0126383_132174641	3300010398	Tropical Forest Soil	MFGERRRSKSIPRFKLGERVALNGLLGELHGGEAIGTVVLIVPDRHGMDVFDEYGIAFADSRQLRVRSFQLTHVMLTTAETHEKTGSLGSQCVTDLRRKH*
Ga0126383_132496131	3300010398	Tropical Forest Soil	MPRFKVGERVALNGLLGELHGPEAIGTVVLVAPDRHGMEAFDKYEIAFEDSRQLQVCSFQLTHVVIDRR*
Ga0137367_105758841	3300012353	Vadose Zone Soil	MPRFKIGERVALNGLLGELHGGEAMGTVVFIAPDRHGMDVFDEYEIAFEDSRQLRVRSFQLTHVVLTDSETNEKATSLGSQGETELKRKP*
Ga0137366_104170782	3300012354	Vadose Zone Soil	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAPDRHGMDEFDEYEIAFEDSRQLRLCRFQLTHVGLTNNKERG*
Ga0126375_106590261	3300012948	Tropical Forest Soil	MRRFAIGDLVALNGLLGEINGEAIGTVVSIAPNEHGITALDEYEIAFEDSRQLRFCRFQLTHVGLNDDACNWLGVLE*
Ga0126375_112877302	3300012948	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARP
Ga0126375_119470821	3300012948	Tropical Forest Soil	MPRFAIGERVALKGLLRELHGGEAIATVVFIAPDRHGMDEFGEYEIAFEDSRQLRVRGFQLTHVAPTDDGRYEKAANRGSQFEA
Ga0126369_133221672	3300012971	Tropical Forest Soil	MPRFKIGERVALKGLFREVHSGEAIGTVVSIAPDSHGMDEFDEYEIAFGDSRQLRFRSFRLTHVVLTDNREARESGKPRFAK*
Ga0132258_128601352	3300015371	Arabidopsis Rhizosphere	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTDDESHEKASLGS*
Ga0132258_133062412	3300015371	Arabidopsis Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAPDRHGMDVFDEYEVAFEDSRQLRVRSFQLTHVVLTDTETHDEAASFDSQPETDLGRKH*
Ga0132255_1030921602	3300015374	Arabidopsis Rhizosphere	MPRFRIGERVGLNGLLREMHGGEAIGTVVSITPDRHGMDGFDEYDIVFEDSRKLRVRSFQLTHVVLTADSRH*
Ga0126371_120327001	3300021560	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHGGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRIRSFQLTHIVLTDDESHEKVSLGS
Ga0209814_101253342	3300027873	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVLIAPDRHGMDVMDEYEIAFEDSRQLRVRSFQLTHVVLTDAETHDEAASFDSQGGTRRSE
Ga0209465_100111002	3300027874	Tropical Forest Soil	MPRFRIGERVGLNGLLREVHRGEAIGTVVSITPDRHGMDGFDEYEIAFENSRKLRVRRFQLTHIVLTDDESHEKASLGS
Ga0209465_100124805	3300027874	Tropical Forest Soil	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVQTDAETHEEAARPDSQGETRP
Ga0209481_107451391	3300027880	Populus Rhizosphere	MPRFKIGERVALNGLLGELHGGDAIGTVVFIAQDKHGMDVFDEYDIAFEDSRQLRVRSFQLTHVVLTDAQTHDEAASFDSQGGTRRSE
Ga0209382_109092352	3300027909	Populus Rhizosphere	MPRFAIGERVALKGLLGELHGGEAIGTVVFIAQDRHGMDEFDEYEIAFEDSRRLRVRSFQLTHVVLTRWEVRESSEPRFAI
Ga0209382_111502051	3300027909	Populus Rhizosphere	MPRFRIGEHVGLNGLLREVHEGEAIGTVVSITPDRHGMDGFDEYEIVFEDSRKLRVRSFQLTHIVLTEDESHEKASLGS
Ga0209382_115762721	3300027909	Populus Rhizosphere	MPRFTIGERVALNGLLGELHGGEAIGTVLFIAPDRHGMDAFDEYEIAFEDSRKLRVRSFQLTHVVLTADKRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters