Metagenome / Metatranscriptome Family F098122

Overview

Basic Information

• Family ID: F098122
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 104
• Average Sequence Length: 38 residues
• Representative Sequence: MATDTLASPATLSRTQTKVFKNFIDGEWVESSTGETFE
• Number of Associated Samples: 97
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 96.15 %
• % of genes from short scaffolds (< 2000 bps): 85.58 %
• Associated GOLD sequencing projects: 95
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (79.808 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.539 % of family members)
• Environment Ontology (ENVO): Unclassified (26.923 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 4.55%
  β-sheet: 21.21%
  Coil/Unstructured: 74.24%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01432	Peptidase_M3	6.73
PF04773	FecR	5.77
PF00857	Isochorismatase	5.77
PF00557	Peptidase_M24	2.88
PF00005	ABC_tran	2.88
PF12704	MacB_PCD	2.88
PF05960	DUF885	2.88
PF13231	PMT_2	2.88
PF05016	ParE_toxin	1.92
PF13411	MerR_1	1.92

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	6.73
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	6.73
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	5.77
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.77
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	2.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.96
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.96
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.77 %
Unclassified	root	N/A	19.23 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.77 %
Unclassified	root	N/A	19.23 %

Level 3

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.81 %
Unclassified	root	N/A	19.23 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.81 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
Unclassified	root	N/A	19.23 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.50 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.96 %
Unclassified	root	N/A	19.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.42 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.96 %
Unclassified	root	N/A	19.23 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.96 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.96 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.54 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.96 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	0.96 %
Unclassified	root	N/A	19.23 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.42 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	0.96 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	0.96 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.96 %
Unclassified	root	N/A	19.23 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.42 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Rhodothermus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus	0.96 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.96 %
Unclassified	root	N/A	19.23 %
unclassified Methanoregulaceae	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae	0.96 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.42 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.92 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	0.96 %
Rhodothermus marinus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus → Rhodothermus marinus	0.96 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.96 %
Unclassified	root	N/A	19.23 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000579|AP72_2010_repI_A01DRAFT_1005351	All Organisms → cellular organisms → Bacteria	2303
3300000955|JGI1027J12803_100904258	All Organisms → cellular organisms → Bacteria	1546
3300005468|Ga0070707_100404398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1325
3300005538|Ga0070731_11123914	All Organisms → cellular organisms → Bacteria	519
3300005542|Ga0070732_10859981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	554
3300005557|Ga0066704_10110301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1815
3300005559|Ga0066700_11129929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	512
3300005575|Ga0066702_10327110	All Organisms → cellular organisms → Bacteria → Acidobacteria	933
3300005614|Ga0068856_102134353	All Organisms → cellular organisms → Bacteria → Acidobacteria	570
3300005712|Ga0070764_10141604	All Organisms → cellular organisms → Bacteria	1316

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.42%
Host-Associated	Host-Associated	10.58%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	10.58%
Plants	Host-Associated → Plants	10.58%
Terrestrial	Environmental → Terrestrial	78.85%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	9.62%
Peat	Environmental → Terrestrial → Peat	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Roots	Host-Associated → Plants → Roots	0.96%
Soil	Environmental → Terrestrial → Soil	71.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.77%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.92%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.92%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10053513	3300000579	Forest Soil	MATDTLATPAGLSTSQTRVFKNFIDGQWVDSVTGDTFENR
JGI1027J12803_1009042581	3300000955	Soil	MATDTVTSPEMMASGTTKVLKNFIDGEWVASSTGETFEDR
Ga0070707_1004043981	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MATETMTGPTILGSTTKTRVFKNFIDGEWVESSTGETFENCN
Ga0070731_111239142	3300005538	Surface Soil	MATDTLASPATLGYNPTKVFKNFIDGEWVESSTGETFE
Ga0070732_108599812	3300005542	Surface Soil	MATDTLASPASLSESQTRVFNNYIDGEWVESSTGATFEN
Ga0066704_101103013	3300005557	Soil	MATETMTGPTILGSTTKTRVFKNFIDGEWVESSTGETF
Ga0066700_111299292	3300005559	Soil	MATETMTGPTILGSTTKTKVFKNFIDGEWVESSTGETFE
Ga0066702_103271103	3300005575	Soil	MATDTLASPASLSESQTRVFKNYIDGEWVESSTGE
Ga0068856_1021343531	3300005614	Corn Rhizosphere	MATDTLATPASLSESQTRVFKNYIDGEWVESSTGET
Ga0070764_101416042	3300005712	Soil	MATDTLASPTILGNSQPTKVYKNFIDGEWVESSSGQ
Ga0070764_102013731	3300005712	Soil	MATDTLATPATLSDAKTRVFKNFIDGEWVESSTGETF
Ga0066903_1068021861	3300005764	Tropical Forest Soil	MATDTLASPPSALSYGPTRVFKNFIDGEWVDDSTGETFEN
Ga0068863_1000485301	3300005841	Switchgrass Rhizosphere	MATTTLTDPPAFSSASKTKVFKNFINGEWAESSSGQTFENISPAD
Ga0075270_10021142	3300005894	Rice Paddy Soil	MATDTLAASIGTGSSARVYKNFIDGEWVESRTGETF*
Ga0075277_10777342	3300005895	Rice Paddy Soil	MATDTLATPASLSASQTRVFKNYIDGEWVESSTGE
Ga0070766_102178883	3300005921	Soil	MATDTLASPATLSYGKTKVFKNFIDGEWIEASTGE
Ga0066790_101940331	3300005995	Soil	MATDTLATPAITGSGKTKVYKNLIDGEWVESKNGET
Ga0070717_111354662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATDTLATPASLSESQTRVFKNYIDGEWVESSTGE
Ga0066656_104759192	3300006034	Soil	MATETMTGPTILGSATKTKVFKNFIDGEWVESSTGETFENC
Ga0070715_103908722	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MATDTVTSAPMLGSSTPTRVFKNFIDGEWVESRTGETFED
Ga0070712_1019339061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATDTVTSPELMASGNTKVLKNFIDGEWVASSTGETFEDRNP
Ga0070765_1004565063	3300006176	Soil	MATDTLTSPATLSYGKTQVFKNFIDGEWVEASTGETFENR
Ga0068871_1006220631	3300006358	Miscanthus Rhizosphere	MATDTMAAATISGGTGTKVYKNLIDGEWVESSTGE
Ga0075425_10000275613	3300006854	Populus Rhizosphere	MATDTLTASIGTSSSARVYKNFIDGEWVESRTGDMFEDRNP
Ga0075436_1011858023	3300006914	Populus Rhizosphere	MATDTLTSPPALGSSTAPKVYKNFIDGEWVESSTGE
Ga0099828_101766341	3300009089	Vadose Zone Soil	MATDTLAAPAIIGSRTTTKVYKNFMDGEWVESSTGET
Ga0116101_12049212	3300009759	Peatland	MATDTLASPAHLSHTSTKVLKNFIDGEWVESSTGETF
Ga0074044_109746692	3300010343	Bog Forest Soil	MATDTLASPATLSHKPTKIMKNFIDGEWVDSSTGE
Ga0126379_114717682	3300010366	Tropical Forest Soil	MATETVAHPAITSTGNTRVFKNFIDGEWVASTTGE
Ga0126381_1024389032	3300010376	Tropical Forest Soil	MATDTLATPAGLSDSQARVFKNFIDGEWVDSSTGDTFE
Ga0126383_111765841	3300010398	Tropical Forest Soil	MATETVTSPELMASGKTRVFQNFIDGEWVASSTGETFEN
Ga0137776_16573671	3300010937	Sediment	MATDTVTSPATLSYGTTKVFKNFIDGEWVESSTGET
Ga0137391_114461192	3300011270	Vadose Zone Soil	MATDTLATPAIIGSRTTTKVYKNFIDGEWVESSTGETFE
Ga0137363_107788302	3300012202	Vadose Zone Soil	MATDTMTSPAVMSSGNTRVYKNYIAGEWVESSTGETF
Ga0137361_107600361	3300012362	Vadose Zone Soil	MATDTVTSPAVLSSGNTKVYKNYIAGEWVESSTGETF
Ga0137395_112096641	3300012917	Vadose Zone Soil	MATHTLATPPVIGSSNPTKVYLNFIDGEWVESSTGETFEN
Ga0137419_105104061	3300012925	Vadose Zone Soil	MATDILTGPTILGSTTRTKIFKNFIDGEWVESSTGETFEN
Ga0137419_107173992	3300012925	Vadose Zone Soil	MATETLPTPATIGNTNPTKVYKNFIDGEWVESSTGETFE
Ga0157373_101707873	3300013100	Corn Rhizosphere	MATDTLTSPPALGSSTAPKVYKNFIDGEWVESSTGETFE
Ga0157372_102556573	3300013307	Corn Rhizosphere	MSMATDTLTASIGTGSSARVYKNFIDGEWVQSRTGEMFED
Ga0182015_102412151	3300014495	Palsa	MATDTLTSPPVLGTGSKTKVYRNFIDGDWVESSTG
Ga0132258_108035651	3300015371	Arabidopsis Rhizosphere	MATDTLASPATLNYGQTKVFKNLIDGEWVDASTGATF
Ga0132258_109547434	3300015371	Arabidopsis Rhizosphere	MATDILAAPAGLSSTQTRVFKNFIDGEWVEASTGE
Ga0187776_108709462	3300017966	Tropical Peatland	MATDTLASPATIGSSTKAKVYKNFIDGEWVEASTGETFE
Ga0187782_114081761	3300017975	Tropical Peatland	VATDTFATPAQLSTSQTRVFKNFIDGEWVEASTGETFENR
Ga0187863_106207902	3300018034	Peatland	MATDTLAAPATLSSSQAKVYKNFIDGEWVESSTGETF
Ga0187855_106197801	3300018038	Peatland	MAIETLASPTTLGVSNPTRIIKNFIDGEWVESSTGETF
Ga0187871_103102172	3300018042	Peatland	MATDTLPTPATLSHQPTKIFKNFIDGEWVDSSTGETFE
Ga0187890_102142521	3300018044	Peatland	MATDTLAAPATLSSSQAKVYKNFIDGEWVESSTGETFE
Ga0187772_107936181	3300018085	Tropical Peatland	MATDTLATPAAQNYGGTKVFKNFIDGEWVEASTGETFEN
Ga0182025_12292552	3300019786	Permafrost	MATDTVITPATPAYGKTKVFKNFIDGEWVEASHGGDI
Ga0193753_100695581	3300020034	Soil	MATDTLATPAIAGSGNTKVYKNFIDGEWVDSESGETFEN
Ga0210395_104605501	3300020582	Soil	MATDTLAAPAILSDSKTKVFKNFIDGEWVESSTGQTFEN
Ga0210401_108454712	3300020583	Soil	MATETVGSPAIMASGNTKVYKNFINGEWVESSTGETF
Ga0210408_104712491	3300021178	Soil	MATETVGSPAIMASGNTKVYKNFINGEWVESSTGETFEDR
Ga0210396_103840071	3300021180	Soil	MATDTLATPATLSDAKTRVFKNFIDGEWVESSTGETFENR
Ga0210389_115012272	3300021404	Soil	MATDTLASPTILGNSQPTKVYKNFIDGEWVKSSSGQTFED
Ga0210387_104938491	3300021405	Soil	MATDTLTSPAALSYGKTKVFKNFIDGEWVEASTGETFEN
Ga0210387_110229221	3300021405	Soil	MATNTLPTPAAVNYGGTKVFKNFIDGEWVESSTGQT
Ga0210383_116647432	3300021407	Soil	MATDTLAAPATLSNSQTKVFKNFIDGEWVESSTGE
Ga0210390_100379491	3300021474	Soil	MATDTVAKVAVASAGNTKIYKNFIDGEWVESTTGETF
Ga0210390_101269413	3300021474	Soil	MATDTLTTPPTLSYGKTKVFKNFIDGEWVEASTGQTFEN
Ga0210392_101832633	3300021475	Soil	MATDTLTSPVALNYGKTKVFKNFIDGEWVESSTGETF
Ga0126371_111154812	3300021560	Tropical Forest Soil	MATDTFRTPAQLSESQVRVFKNFIDGEWVEASTGETF
Ga0213852_10411152	3300021858	Watersheds	MATDTLATPADLSSTQARVFKNFIDGEWVESSTGE
Ga0213853_101037731	3300021861	Watersheds	MATDTLATPATLSNSQTRVFKNFIDGEWVESSTGETF
Ga0224561_10233622	3300023030	Soil	MATDTLTSPAILGYNPTKVTKNFIDGEWVESVTGETFEDRNP
Ga0208691_10483941	3300025612	Peatland	MATDTLTSPVTLSYGKTKVFKNFIDGEWVEASTGE
Ga0207680_111279962	3300025903	Switchgrass Rhizosphere	MATDTMAAATISGGTGTKVYKNLIDGEWVESSTGETFE
Ga0207647_100716342	3300025904	Corn Rhizosphere	MATDTMAAATISGGTGTKVYKNLIDGEWVESSTGETFEN
Ga0207700_107875951	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MATDTLATPASLSESQTRVFKNYIDGEWVESSTGETFENRN
Ga0207664_108386662	3300025929	Agricultural Soil	MATETFATPASLSESQARVFKNFIDGDWVDSSTGET
Ga0209222_10770181	3300027559	Forest Soil	MATDTLASPATLGYNPTKVYKNFIDGEWVESTTGETF
Ga0209447_100243722	3300027701	Bog Forest Soil	MATKTLASPAIVGYNPTKVFKNFIDGEWVESSTGETFEDR
Ga0209655_102037721	3300027767	Bog Forest Soil	MATDTLTSPAALSHTPTKILKNFIDGEWVESSTGETFEDR
Ga0209580_102555162	3300027842	Surface Soil	MATETMTTPPPALGYGQTRVFKNFIDGEWVESSTGLTFENRN
Ga0209701_105823111	3300027862	Vadose Zone Soil	MATDTLATPAIIGSRTTTKVYKNFIDGEWVESSTGETFENL
Ga0209167_101627441	3300027867	Surface Soil	MATDTLATPATLSDAKTRVFKNFIDGEWVEFSTGETFE
Ga0209465_100594983	3300027874	Tropical Forest Soil	MATDTLATPAGLSTSQTRVFKNFIDGQWVDSVTGDTF
Ga0209275_100608212	3300027884	Soil	MATDTLAAPATLSNSQTKVFKNFIDGEWVESSTGETFE
Ga0209624_107238771	3300027895	Forest Soil	MATDTFIAPSALSPTQTKVFKNFIDGEWVASSTGETFEN
Ga0307305_104571342	3300028807	Soil	MATDTLASPAVIGSNTKTKTYKNFIDGEWVESSTGQT
Ga0308309_109902352	3300028906	Soil	MATDTLTSPAMLGTSTAPKVYKNFIDGEWVESSTGESF
Ga0311340_113647651	3300029943	Palsa	MATDTLASPAILGYSPTKVFKNFIDGEWVEASTRETF
Ga0311371_103773871	3300029951	Palsa	MATDTLASPATLSHTPTKVLKNFIDGEWVESSTGETF
Ga0311342_105051102	3300029955	Bog	MATLTSPATLGSTHPTKVYKNFIDGEWVESSTGETF
Ga0302176_102891971	3300030057	Palsa	MATDTFTAPTPATLSDTQTKVFKNFIDGEWVDSVTGETFEN
Ga0302275_101131354	3300030518	Bog	MAADTLASPATLGYNKTKVLKNFVDGEWVESSTGET
Ga0311356_101974141	3300030617	Palsa	MATDTLATPAAINYGGTKVFKNFIDGEWVESSTGETFENR
Ga0311354_100725654	3300030618	Palsa	MATDTFTAPTPATLSDTQTKVFKNFIDGEWVDSVTGET
Ga0073994_122988501	3300030991	Soil	MATHTLATPPVIGSSSPTKVYQNFIDGEWVESSTGET
Ga0170824_1258808272	3300031231	Forest Soil	MATDTLASPATLSHSQTKVFKNFIDGEWVESTTGETFENR
Ga0170824_1266586552	3300031231	Forest Soil	MATDTLSSPVLDGSSSHPIVYKNFIDGEWVESSTGQTF
Ga0302325_126870761	3300031234	Palsa	MATDTLAAPATLSNSQAKVYKNFIDGEWVESSTGETFE
Ga0307474_101688271	3300031718	Hardwood Forest Soil	MATDTLASPATLSNTQTKVFKNFIDGEWVESSTGE
Ga0307473_106266542	3300031820	Hardwood Forest Soil	MATDTLAGPAMLGTSTKARVYKNFIDGEWVESSTGETFENR
Ga0307470_109612542	3300032174	Hardwood Forest Soil	MATDAMPTPATLSDTQARVGENFIDGEWVDSRTPMLFSVN
Ga0307471_1016360952	3300032180	Hardwood Forest Soil	MATDAMPTPATLSDTQARVGENFIDGEWMDSRTPMLFSVN
Ga0307471_1027523932	3300032180	Hardwood Forest Soil	MATDTLASPATLSRTQTKVFKNFIDGEWVESSTGETFE
Ga0335085_108977461	3300032770	Soil	MATDTLASPATLNYGKTKVFKNFIDGEWVEASTGETF
Ga0335079_1000293715	3300032783	Soil	MATDTLASPAMLGSSSKSKVYKNFIDGEWVEASTG
Ga0335071_100392931	3300032897	Soil	MATDTLATPATLSTSQTRVFKNFINGEWVESSTGDTFEN
Ga0335076_100712101	3300032955	Soil	MATDTLAAPATLSSGNTKVFKNFIDGEWVEASTGET
Ga0335077_109984441	3300033158	Soil	MATDTLATPAKLSNSQTRVFKNFIDGEWVESSTGQT