Metagenome / Metatranscriptome Family F098097

Basic Information
Family ID	F098097
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	39 residues
Representative Sequence	MIKTGFFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.87 %
% of genes near scaffold ends (potentially truncated)	12.50 %
% of genes from short scaffolds (< 2000 bps)	64.42 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Unclassified (52.885 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (26.923 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	28.85
PF06123	CreD	27.88
PF00486	Trans_reg_C	18.27
PF13417	GST_N_3	5.77
PF01266	DAO	1.92
PF08282	Hydrolase_3	1.92
PF16901	DAO_C	1.92
PF01546	Peptidase_M20	0.96
PF05137	PilN	0.96
PF00672	HAMP	0.96
PF02874	ATP-synt_ab_N	0.96
PF00528	BPD_transp_1	0.96
PF00119	ATP-synt_A	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	27.88
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	1.92
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	1.92
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	1.92
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.92
COG3166	Type IV pilus assembly protein PilN	Cell motility [N]	1.92
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	1.92
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
All Organisms	root	All Organisms	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
cellular organisms	root	All Organisms → cellular organisms	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	10.58 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.88 %
Betaproteobacteria bacterium SG8_39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	6.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.88 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.92 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005468\|Ga0070707_100159448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2198	Open in IMG/M
3300005538\|Ga0070731_10000193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	106091	Open in IMG/M
3300005617\|Ga0068859_100030880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5377	Open in IMG/M
3300005829\|Ga0074479_10553221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1433	Open in IMG/M
3300005830\|Ga0074473_10760633	Not Available	1273	Open in IMG/M
3300005836\|Ga0074470_11162907	All Organisms → cellular organisms → Bacteria → Proteobacteria	10725	Open in IMG/M
3300005836\|Ga0074470_11581404	Not Available	766	Open in IMG/M
3300006041\|Ga0075023_100559887	Not Available	525	Open in IMG/M
3300006050\|Ga0075028_100621985	Not Available	643	Open in IMG/M
3300006059\|Ga0075017_100647646	Not Available	810	Open in IMG/M
3300006102\|Ga0075015_100327442	Not Available	849	Open in IMG/M
3300006163\|Ga0070715_10813514	Not Available	568	Open in IMG/M
3300006195\|Ga0075366_10181905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1277	Open in IMG/M
3300006854\|Ga0075425_100210640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	2234	Open in IMG/M
3300007004\|Ga0079218_12995396	Not Available	569	Open in IMG/M
3300009098\|Ga0105245_10032191	All Organisms → cellular organisms → Bacteria → Proteobacteria	4642	Open in IMG/M
3300009148\|Ga0105243_12784853	Not Available	529	Open in IMG/M
3300009444\|Ga0114945_10434038	Not Available	786	Open in IMG/M
3300009649\|Ga0105855_1134317	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300009662\|Ga0105856_1100894	Not Available	842	Open in IMG/M
3300009678\|Ga0105252_10049980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	1580	Open in IMG/M
3300010391\|Ga0136847_12013391	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010391\|Ga0136847_12918503	Not Available	568	Open in IMG/M
3300010397\|Ga0134124_11081408	Not Available	818	Open in IMG/M
3300010401\|Ga0134121_10014167	All Organisms → cellular organisms → Bacteria → Proteobacteria	6338	Open in IMG/M
3300010880\|Ga0126350_10664412	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300011399\|Ga0137466_1085414	Not Available	517	Open in IMG/M
3300011408\|Ga0137460_1067907	Not Available	681	Open in IMG/M
3300011414\|Ga0137442_1141920	Not Available	533	Open in IMG/M
3300011419\|Ga0137446_1146403	Not Available	569	Open in IMG/M
3300011421\|Ga0137462_1027332	Not Available	1153	Open in IMG/M
3300011430\|Ga0137423_1228551	Not Available	553	Open in IMG/M
3300011436\|Ga0137458_1270575	Not Available	518	Open in IMG/M
3300012041\|Ga0137430_1104202	Not Available	803	Open in IMG/M
3300012671\|Ga0137318_1009145	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300014324\|Ga0075352_1114823	Not Available	722	Open in IMG/M
3300014870\|Ga0180080_1060771	Not Available	640	Open in IMG/M
3300014872\|Ga0180087_1082427	Not Available	618	Open in IMG/M
3300015084\|Ga0167654_1014401	Not Available	1322	Open in IMG/M
3300015192\|Ga0167646_1064587	Not Available	816	Open in IMG/M
3300015195\|Ga0167658_1004565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4865	Open in IMG/M
3300015201\|Ga0173478_10225578	Not Available	803	Open in IMG/M
3300015203\|Ga0167650_1058906	Not Available	947	Open in IMG/M
3300015248\|Ga0180079_1031569	Not Available	717	Open in IMG/M
3300015256\|Ga0180073_1130006	Not Available	544	Open in IMG/M
3300017965\|Ga0190266_10568612	Not Available	678	Open in IMG/M
3300018084\|Ga0184629_10038598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2115	Open in IMG/M
3300018084\|Ga0184629_10375075	Not Available	748	Open in IMG/M
3300018481\|Ga0190271_11225551	Not Available	872	Open in IMG/M
3300018481\|Ga0190271_11776311	Not Available	729	Open in IMG/M
3300018481\|Ga0190271_12406655	Not Available	630	Open in IMG/M
3300019458\|Ga0187892_10003017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	31805	Open in IMG/M
3300021859\|Ga0210334_10033483	Not Available	981	Open in IMG/M
3300022309\|Ga0224510_10071310	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10063600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1672	Open in IMG/M
3300025311\|Ga0209343_10129636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	2033	Open in IMG/M
3300025324\|Ga0209640_10021805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5592	Open in IMG/M
3300025324\|Ga0209640_10096575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2548	Open in IMG/M
3300025324\|Ga0209640_10227324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300025505\|Ga0207929_1000184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17596	Open in IMG/M
3300025922\|Ga0207646_10123348	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300025927\|Ga0207687_10052396	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300025934\|Ga0207686_10213330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	1389	Open in IMG/M
3300025942\|Ga0207689_10988956	Not Available	710	Open in IMG/M
3300026075\|Ga0207708_10386619	Not Available	1155	Open in IMG/M
3300026075\|Ga0207708_10884898	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300026102\|Ga0208914_1048391	Not Available	526	Open in IMG/M
3300027829\|Ga0209773_10187142	Not Available	865	Open in IMG/M
3300027843\|Ga0209798_10576152	Not Available	504	Open in IMG/M
3300027869\|Ga0209579_10009138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	6210	Open in IMG/M
3300027894\|Ga0209068_10058727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	1966	Open in IMG/M
3300027894\|Ga0209068_10115645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	1428	Open in IMG/M
3300027911\|Ga0209698_10049465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3695	Open in IMG/M
3300027915\|Ga0209069_11038329	Not Available	505	Open in IMG/M
3300029987\|Ga0311334_10904996	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031576\|Ga0247727_10064222	All Organisms → cellular organisms → Bacteria → Proteobacteria	4252	Open in IMG/M
3300031576\|Ga0247727_10353173	Not Available	1214	Open in IMG/M
3300031720\|Ga0307469_11116132	Not Available	742	Open in IMG/M
3300031726\|Ga0302321_102971342	Not Available	553	Open in IMG/M
3300031965\|Ga0326597_10126389	All Organisms → cellular organisms → Bacteria → Proteobacteria	3083	Open in IMG/M
3300032018\|Ga0315272_10220237	Not Available	908	Open in IMG/M
3300032157\|Ga0315912_10000292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	103094	Open in IMG/M
3300032157\|Ga0315912_10056214	All Organisms → cellular organisms → Bacteria → Proteobacteria	3111	Open in IMG/M
3300032163\|Ga0315281_10060763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4536	Open in IMG/M
3300032163\|Ga0315281_10115718	All Organisms → cellular organisms → Bacteria → Proteobacteria	3085	Open in IMG/M
3300032163\|Ga0315281_10140728	All Organisms → cellular organisms → Bacteria → Proteobacteria	2747	Open in IMG/M
3300032163\|Ga0315281_11703665	Not Available	611	Open in IMG/M
3300032205\|Ga0307472_102484982	Not Available	527	Open in IMG/M
3300032256\|Ga0315271_10395874	Not Available	1156	Open in IMG/M
3300032275\|Ga0315270_10201956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	1219	Open in IMG/M
3300032770\|Ga0335085_10053340	All Organisms → cellular organisms → Bacteria → Proteobacteria	5448	Open in IMG/M
3300032770\|Ga0335085_10228158	All Organisms → cellular organisms → Bacteria → Proteobacteria	2257	Open in IMG/M
3300032782\|Ga0335082_11066094	Not Available	673	Open in IMG/M
3300032828\|Ga0335080_10124143	All Organisms → cellular organisms → Bacteria → Proteobacteria	2864	Open in IMG/M
3300032829\|Ga0335070_10584349	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300032893\|Ga0335069_10032334	All Organisms → cellular organisms → Bacteria → Proteobacteria	7065	Open in IMG/M
3300032893\|Ga0335069_10036744	All Organisms → cellular organisms → Bacteria → Proteobacteria	6575	Open in IMG/M
3300032955\|Ga0335076_10004462	All Organisms → cellular organisms → Bacteria → Proteobacteria	14155	Open in IMG/M
3300032955\|Ga0335076_10039872	All Organisms → cellular organisms → Bacteria → Proteobacteria	4694	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.35%
Host-Associated	Host-Associated	8.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.04%
Aquatic	Environmental → Aquatic	42.31%
Plants	Host-Associated → Plants	8.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.31%
Sediment	Environmental → Aquatic → Sediment	26.92%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%
Cave	Environmental → Terrestrial → Cave	4.81%
Marine	Environmental → Aquatic → Marine	1.92%
Peat	Environmental → Terrestrial → Peat	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.46%
Lake	Environmental → Aquatic → Freshwater → Lake	9.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.96%
Sediment	Environmental → Aquatic → Marine → Sediment	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.96%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	13.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.88%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.96%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.96%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.96%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011408	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT723_2	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012671	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT300_2	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300015084	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5a, rocky medial moraine)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026102	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070707_1001594483	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAQPTRRLSMIKTGFFAVEVAAQILLAAAIGLFVSVVLAGAVLLLAA*
Ga0070731_1000019369	3300005538	Surface Soil	MVKTRMFAVELAAQIVLAAAIGTFVAIVLAGATMLLAA*
Ga0068859_1000308803	3300005617	Switchgrass Rhizosphere	MIKTGFFAVELAAQILLAAAIGLSVSIVLAGAVLLLAA*
Ga0074479_105532211	3300005829	Sediment (Intertidal)	MIKTGFFAVELAAQILLAAGIGLSVSVVLAGAVLLLAA*
Ga0074473_107606332	3300005830	Sediment (Intertidal)	MTRSTMFAVELAAQCLLAGAVGLLVSIVLAFVVLLLAA*
Ga0074470_111629077	3300005836	Sediment (Intertidal)	MLKTGYFAVEIAAQILLAAAIGLFVSIVLAGVVLLLAA*
Ga0074470_115814042	3300005836	Sediment (Intertidal)	MFKTGFFAVELAAQILLASAIGLFVSLVLSGAVLLLAAA*
Ga0075023_1005598872	3300006041	Watersheds	MIKTGFFAVELAAQILLAASIGLFVSIVLAGAVLLLAA*
Ga0075028_1006219852	3300006050	Watersheds	MVKTRMFAVELAAQIVLAAAIGVFVAVVLAGVTMLLAA*
Ga0075017_1006476462	3300006059	Watersheds	MVKNRMIAVELAAQVALACAIGIFVALVLAGATMLLAAGPSG*
Ga0075015_1003274421	3300006102	Watersheds	MNRQTTTVFAIELATQIALAAAVGLLVSLALAAAA
Ga0070715_108135143	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQDIEREMSMTKTLHYAVELSAQIVLAAAVGLFVSIALAGAVLLLAA*
Ga0075366_101819053	3300006195	Populus Endosphere	MTKQPPFIVEIAAQITLALAIGLFVSIVLAGITLLLAA*
Ga0075425_1002106402	3300006854	Populus Rhizosphere	MIKTGFFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA*
Ga0079218_129953962	3300007004	Agricultural Soil	MIKTGYFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA*
Ga0111539_110205871	3300009094	Populus Rhizosphere	AAEIVAQVALASAIGVCVSIVLAGAALLLAGGPA*
Ga0105245_100321912	3300009098	Miscanthus Rhizosphere	MIKTGFFAVELAAQVLLAAAIGLSVSIVLAGAVLLLAA*
Ga0105243_127848532	3300009148	Miscanthus Rhizosphere	MIKTGFFAVELAAQILLAAAVGLFVSIVLAGAVLLLAA*
Ga0114945_104340381	3300009444	Thermal Springs	RRRARMSKSKLFALELAAQVVLAAAVGLFVSVVLAGAAMLLAA*
Ga0105855_11343173	3300009649	Permafrost Soil	SPNMVKTRMFAVELAAQIVLAAAVGTFVAIVLAGAAMLLAA*
Ga0105856_11008942	3300009662	Permafrost Soil	MVKTRMFAVELAAQIVLAAAIGTFVAIVLAGAAMLLAA*
Ga0105252_100499803	3300009678	Soil	MSMTRSTLFAVELASQIALAAAVGLFVSIVLAGAVLLLAA*
Ga0136847_120133911	3300010391	Freshwater Sediment	IMVKTSIFAVELAAQIVLAAAIGLFASIVLASITLLLAA*
Ga0136847_129185032	3300010391	Freshwater Sediment	MRIVDKEKRMTKTSTFAVELATQIVLAAAIGLVASIVLAGGALLLAA*
Ga0134124_110814082	3300010397	Terrestrial Soil	MSMTKSLHQAVEISAQIALAAAVGLFVSIALGSAV
Ga0134121_100141675	3300010401	Terrestrial Soil	MSMTKSLHQAVEISAQIALAAAVGLFVSIALGSAVLLLAA*
Ga0126350_106644122	3300010880	Boreal Forest Soil	MVKTRMFAVELAAQIVLAAAIGIFVAVVLAGAAMLLAA*
Ga0137466_10854142	3300011399	Soil	MLKPGFFAIELSTQILLAGAIGLFASIVLAGAVLLLAA*
Ga0137460_10679071	3300011408	Soil	MVKSREFVVELAAQILLAAAIGVSVSIMLAGAALLLAA*
Ga0137442_11419202	3300011414	Soil	MTKSTLFAAELAEQIVLAAAIGLFVSIVLAGVAMLLAA*
Ga0137446_11464033	3300011419	Soil	MTGSTLFAMELATQIVLAGAVGLFVSIVLAGAALLLAA*
Ga0137462_10273322	3300011421	Soil	MIKTGFFAVEVAAQILLAAAIGLFVSIVLAGAVLLLAA*
Ga0137423_12285512	3300011430	Soil	MSMTRSTLFAVELATQIALAAAVGLFVSIALAGAVLLLAA*
Ga0137458_12705751	3300011436	Soil	TMTGSTLFAMELATQIVLAGAVGLFVSIVLAGAALLLAA*
Ga0137430_11042023	3300012041	Soil	LIKTGFFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA*
Ga0137318_10091452	3300012671	Soil	MVKTRMFAVELATQIVLATAIGLLASIVLAGGALLLAA*
Ga0075352_11148232	3300014324	Natural And Restored Wetlands	MTRSALFAVELAAQIVLAAAVGLFVSIVLAGVAMLLAA*
Ga0180080_10607712	3300014870	Soil	MSRSTSFAAELATQFVLASTVGLLVSIVLAGAALLLAA*
Ga0180087_10824271	3300014872	Soil	MRIVNKEKRMTKTSTFAVELATQFVLAAAVGLLASIVLAGGALLLAA*
Ga0167654_10144012	3300015084	Glacier Forefield Soil	MFKTGFFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA*
Ga0167646_10645871	3300015192	Glacier Forefield Soil	MIKTGFFAVELATQILLAASIGLFVSVVLAGAVLLLAA*
Ga0167658_10045651	3300015195	Glacier Forefield Soil	MIKTGFFAVGLATQILLAASIGLSVSVVLAGAVLLLAA*
Ga0173478_102255781	3300015201	Soil	MIKTGFFAVELAAQILLAAAIGLFVSIVLACVVLLLAA*
Ga0167650_10589062	3300015203	Glacier Forefield Soil	MIKSGFFAVELAAQILLAASIGLFVSIVLAGAVLLLAA*
Ga0180079_10315691	3300015248	Soil	MIKTGFFAVELAAQILLAVAIGFSVSIVLAGAVLLLAA*
Ga0180073_11300062	3300015256	Soil	MNKTAFFAVELAAQIVLAAAIGLFVSIVLAGVALLLAA*
Ga0190266_105686121	3300017965	Soil	RHPTRRTPMIKSGFFAVELAAQILLAAAIGLFVSIVLACFVLLLAA
Ga0184629_100385983	3300018084	Groundwater Sediment	MNKPSTAVFAVELAAQIALAAAVGLFVSIVLAGAALLLAA
Ga0184629_103750752	3300018084	Groundwater Sediment	MTKTSTFAVELATQFVLAAAVGLLASIVLAGGALLLAA
Ga0190271_112255512	3300018481	Soil	MIKSGFFAVELAAQILLAAAIGLFVSVVLACFVLLLAA
Ga0190271_117763112	3300018481	Soil	MIKTGFFAVELAAQILLAAAIGLFVSIVLACFVLLLAA
Ga0190271_124066553	3300018481	Soil	MIKSGFFAVELAAQVLLAAAIGLFVSVVLACFVLLLAA
Ga0187892_1000301719	3300019458	Bio-Ooze	MPKPGAYAVELAAQLALAAAIGFFVSIVLAGATLLLA
Ga0187893_100584713	3300019487	Microbial Mat On Rocks	MPRPGTYAAELAAQIALAAAVGLCVSFLLAGATLLLA
Ga0210334_100334832	3300021859	Estuarine	MTRSTMFAVELAAQCLLAGAVGLLVSIVLAFVVLLLAA
Ga0224510_100713103	3300022309	Sediment	MIKTGLFAVELAAQILLAVAIGLCVSIVLAGTVLLLAA
(restricted) Ga0233424_100636003	3300023208	Freshwater	MNSTRNFAVEIAAQVVLALAVGLFVSVLLAGATLLLAA
Ga0209343_101296364	3300025311	Groundwater	MVKSREFAVELAAQIVLAAAIGASVSIVLASAVLLLAA
Ga0209520_100474324	3300025319	Soil	MTITYKGTSMTRIRLFAAELATQIVLAAAIGLFASIALAGAALLLAA
Ga0209640_100218057	3300025324	Soil	MTITYKGTSMTRIRLFAAELATQIVLAAAIGLFASIVLAGAALLLAA
Ga0209640_100965753	3300025324	Soil	MTRSTIFAVELATQFVLAGVVGLLVSIALAAVTLLLAA
Ga0209640_102273243	3300025324	Soil	MTRPTTYAIEIAAQLGLAAAIGLFVSIVLAGATLLLAA
Ga0207929_10001848	3300025505	Arctic Peat Soil	MVKTRMFAVELAAQIVLAAAIGIFVAVVLAGAAMLLAA
Ga0207646_101233483	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIKTGFFAVEVAAQILLAAAIGLFVSVVLAGAVLLLAA
Ga0207687_100523964	3300025927	Miscanthus Rhizosphere	MIKTGFFAVELAAQILLAAAIGLFVSIVLAGAVLLLAA
Ga0207686_102133303	3300025934	Miscanthus Rhizosphere	MIKTGFFAVELAAQVLLAAAIGLSVSIVLAGAVLLLAA
Ga0207689_109889561	3300025942	Miscanthus Rhizosphere	MIKTGFFAVELAAQILLAAAIGLSVSIVLAGAVLLLAA
Ga0207708_103866193	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIKTGFFAVELAAQILLAAAVGLFVSIVLAGAVLLLAA
Ga0207708_108848982	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTKQPPFIVEIAAQVTLALAIGLFVSIVLAGITLLLAA
Ga0208914_10483911	3300026102	Natural And Restored Wetlands	MTRSALFAVELAAQIVLAAAVGLFVSIVLAGVAMLLAA
Ga0209773_101871422	3300027829	Bog Forest Soil	MVKTKMFAVELAAQIVLAAAIGTFVAIVLAGATMLLA
Ga0209798_105761521	3300027843	Wetland Sediment	MIKTGLFAVELAAQVVLAAAIGLFVSIVLAGITMLLAA
Ga0209579_100091385	3300027869	Surface Soil	MVKTRMFAVELAAQIVLAAAIGTFVAIVLAGATMLLAA
Ga0209068_100587271	3300027894	Watersheds	MIKTGFFAVELAAQILLAASIGLFVSIVLAGAVLLLAA
Ga0209068_101156453	3300027894	Watersheds	MVKTRMFAVELAAQIVLAAAIGVFVAVVLAGVTMLLAA
Ga0209698_100494655	3300027911	Watersheds	MVKNRMIAVELAAQVALACAIGIFVALVLAGATMLLAAGPSG
Ga0209069_110383292	3300027915	Watersheds	MIKTGFFAVELAAQVLLAAAIGFFVSIVLASAVLLL
Ga0311334_109049961	3300029987	Fen	FTFFAVEVAAQVLLALAIGLFVSIVLVGAVLLLAAGPSA
Ga0247727_100642224	3300031576	Biofilm	MIKTGIFAVELAAQIVLAASIGLFASLVLAGITLLLAA
Ga0247727_101013062	3300031576	Biofilm	MTKPTPYVVEIAAQVALAAAVGMSVSIVLASATLLLAA
Ga0247727_103531732	3300031576	Biofilm	MQATGKGTAMTSSKLFAVELLAQIVLAAAIGIFVSMVLVGATLLLAA
Ga0307469_111161322	3300031720	Hardwood Forest Soil	MIKTGFFAVELAAQVLLAAAIGLSVCIVLAGAVLLLAA
Ga0302321_1029713422	3300031726	Fen	MIKTGFLAVEIATQVLLAASIGLFVSVVLAGAVLLIAA
Ga0326597_101263891	3300031965	Soil	MTRSTMFAVELATQFVLAGVVGLLVSIALAAVALLLAA
Ga0315272_102202371	3300032018	Sediment	MIKTGFFAAELATQILLAAAIGLCVSIVLAGAVLLLAA
Ga0315912_1000029214	3300032157	Soil	MTRSTSFAAELAAQIVLAAGIGLSVSIVLAGVAMLLAA
Ga0315912_100562145	3300032157	Soil	MTRPEMFAVELATQIALAAGIGLCVSVVLACIAMLLAA
Ga0315281_100607635	3300032163	Sediment	MTKITLFAVELATQTVLATAVGLFVSIVLAGFALLLAA
Ga0315281_101157185	3300032163	Sediment	MTRTGYLAVELATQILLAAAIGLSVSIVLAGAVLLLAA
Ga0315281_101407284	3300032163	Sediment	MVKSKEVALELTLQIVLAAAIGISVSIVLAGATLLLAA
Ga0315281_117036652	3300032163	Sediment	MVKTSMFAVELAAQIVLATAIGIFVSIVLAGAVLLLAA
Ga0307472_1024849821	3300032205	Hardwood Forest Soil	MMKTGFFAVELAAQILLAAAIGLSVSIVLAGAVLLLAA
Ga0315271_103958742	3300032256	Sediment	MTRTRLFAVELAAQIGLAAAIGLFISTVLAGATLLLAA
Ga0315270_102019563	3300032275	Sediment	MIKTGFFAAELATQILLAAAIGLCVSIVLAGAVQLLAA
Ga0335085_100533405	3300032770	Soil	MTKQPPFVVELAAQIVLAAGIGLFVSIVLAGITVLLAA
Ga0335085_102281583	3300032770	Soil	MTKSIPLAVELAAQVALATAIGLFVSIVLACVVILIAE
Ga0335082_110660942	3300032782	Soil	MTKSIPLAVELAAQVALATAIGLFVSIVLACVVILLAA
Ga0335080_101241433	3300032828	Soil	MINTSQHVVELAAQVALAAAIGLFVSLALAGAVLLLAA
Ga0335070_105843493	3300032829	Soil	VTKTLHHAVEISAQIVLAAAVGLFVSITLAGAVLLLAA
Ga0335069_100323345	3300032893	Soil	MINTGQHVVELAAQVVLAAAVGLFVSLALAGGVLLLAA
Ga0335069_100367447	3300032893	Soil	MIRLFAVELAAQIVLAAAIGIFVSIVLAGAAMLLAA
Ga0335076_1000446215	3300032955	Soil	MIRTMHHAVEIAAQVVLAAAVGLFVSVALAGAVLLLAA
Ga0335076_100398725	3300032955	Soil	MIKSIPFAVELAAQVALAAAIGLFVSIVLACAVILLAA
Ga0335084_100021656	3300033004	Soil	MINTSQHVVELAAQVALAAAVGLFVSLALAGGVLLLAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters