Basic Information | |
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Family ID | F098026 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 46 residues |
Representative Sequence | PVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Number of Associated Samples | 90 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 2.88 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (37.500 % of family members) |
Environment Ontology (ENVO) | Unclassified (90.385 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (79.808 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Seawater Seawater Marine Marine Oceanic Marine Seawater Marine Seawater Marine Seawater Marine Seawater Marine Marine Hydrothermal Vent Fluids Diffuse Hydrothermal Flow Volcanic Vent Hydrothermal Vent Plume Seawater Deep Subsurface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
LPfeb10P16500mDRAFT_10169561 | 3300000173 | Marine | VQARLAFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYFKQKK* |
LPjun09P16500mDRAFT_10309391 | 3300000179 | Marine | PVQARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
LPjun09P12500mDRAFT_10326603 | 3300000222 | Marine | AFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKDKKS* |
LPjun09P12500mDRAFT_10419312 | 3300000222 | Marine | SFWEPSVQARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
GBIDBA_101089262 | 3300001683 | Hydrothermal Vent Plume | GLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS* |
GOS2242_10556834 | 3300001967 | Marine | VQAGLAFQKQYFDMHYDIDTTAKQWEMMLQTIKNNIERSKEQKS* |
Ga0066610_101386772 | 3300004276 | Marine | WEPPVQSGLAFQKQYYDMHYDIETTAKQWIMMLETIKNNIENTKEKKS* |
Ga0066849_101885292 | 3300005430 | Marine | LKDAIDNFWEAPVQGGLAVQKQYFDMHYDIETTAKQWEMMLSTIKSNLEKKS* |
Ga0066838_100107071 | 3300005592 | Marine | AIDNFWKPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKENIERSKEKKS* |
Ga0066383_101409022 | 3300005953 | Marine | VQARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0066368_101277771 | 3300006002 | Marine | AIENFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0066374_101151371 | 3300006012 | Marine | KQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS* |
Ga0066382_102950501 | 3300006013 | Marine | YYDMHYDIETTARQWTMMLETIKGNIEKTKEKKS* |
Ga0081762_11671673 | 3300006083 | Diffuse Hydrothermal Flow Volcanic Vent | QYFDMHYDIETTARQWTMMLETIKGNIEKTKEKKSQ* |
Ga0066836_100725431 | 3300006166 | Marine | IDNFWEAPVQGGLAVQKQYFDMHYDIETTAKQWEMMLSTIKSNLKKNNE* |
Ga0068490_11494611 | 3300006303 | Marine | LTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0068470_19064503 | 3300006308 | Marine | FWEPPVQARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEHSKQKK* |
Ga0068473_14909341 | 3300006316 | Marine | NFWKPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKIKEKKS* |
Ga0068473_17144902 | 3300006316 | Marine | IENFWKPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0068501_11989421 | 3300006325 | Marine | LRDAIDSFWEPPVLARLAFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0068483_11973475 | 3300006330 | Marine | ENFWEPPVQGGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0068483_16112602 | 3300006330 | Marine | YVLKDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0068480_13543373 | 3300006335 | Marine | EPPVQARLTFQKQYLDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0068502_11623411 | 3300006336 | Marine | ARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0068502_13956771 | 3300006336 | Marine | LTFQKQYFDMHYDIDATAKQWEMMLETIKTNIEYSKQKK* |
Ga0068502_14151141 | 3300006336 | Marine | VQAGLAFQKQYYDMHYDIETTAKQWAMMLETIKNNIENTKEKKS* |
Ga0068481_14025376 | 3300006339 | Marine | FSYVLREAIDSFWEPPVQARLAFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSK* |
Ga0068481_15363264 | 3300006339 | Marine | FAYVLKDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0068493_101738651 | 3300006341 | Marine | EPPVQGGLAFQKQYYDMHYDIETTAKQWTMMLETIKGNIEKTKEKKS* |
Ga0099695_11241201 | 3300006344 | Marine | HVLRDAIDSFWEPPVQARLTFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK* |
Ga0099696_11901623 | 3300006346 | Marine | AGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS* |
Ga0099697_14751802 | 3300006347 | Marine | INNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0098033_11310701 | 3300006736 | Marine | IDSFWESPVQTRLTFQKQYFDMHYDIDTTAKQWIMMLETIKTNIEYSKQKK* |
Ga0098054_11759892 | 3300006789 | Marine | VLKDAIDSFWQGPVQAGLGFQKQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK* |
Ga0098054_12297961 | 3300006789 | Marine | PVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS* |
Ga0066376_103135523 | 3300006900 | Marine | GLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKKKKS* |
Ga0066376_103882442 | 3300006900 | Marine | YYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS* |
Ga0098045_10764983 | 3300006922 | Marine | AFQKQYYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS* |
Ga0098041_11720702 | 3300006928 | Marine | WEPSVQAGLGFQKQYFDMHYDIETTSKQWEMMLQTIKNNIERSKEQKS* |
Ga0066366_104371942 | 3300007283 | Marine | KFAYVLKDAIDNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNLEKKS* |
Ga0098052_13666742 | 3300008050 | Marine | AGLGFQKQYFDMHYDIDTTAKQWEMMLETIKSNIEYSKQKK* |
Ga0117902_13585301 | 3300009104 | Marine | LAFQKQYFDMHYDIDTTAKQWSLMLETIKNSLEKKS* |
Ga0114996_106479382 | 3300009173 | Marine | KDAIDSFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLGTIKTNLEYSKQKK* |
Ga0114996_106646282 | 3300009173 | Marine | AFQKQYFDMHYDIDTTAKQWTMMLSTIKDNLEKSK* |
Ga0114996_108208962 | 3300009173 | Marine | KDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKDKKSQ* |
Ga0114997_106917391 | 3300009425 | Marine | PVQAGLAFQKQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK* |
Ga0105236_10417782 | 3300009619 | Marine Oceanic | VQGGLAFQKQYFDMHYDIETTARQWTMMLETIKNNLEKKS* |
Ga0114933_101231884 | 3300009703 | Deep Subsurface | KDAIDNFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWSLMLETIKNSLEKKS* |
Ga0114999_111507531 | 3300009786 | Marine | FQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKDKKSQ* |
Ga0115012_114830962 | 3300009790 | Marine | DNFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWTLMLETIKNSLEKKS* |
Ga0105235_1299812 | 3300009791 | Marine Oceanic | QYYDMHYDIETTAKQWTMMLETIKGNIEKTKEKKS* |
Ga0098061_11434203 | 3300010151 | Marine | YYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS* |
Ga0098047_102116511 | 3300010155 | Marine | NFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWTMMLETIKTSLEKKS* |
Ga0163108_108842052 | 3300012950 | Seawater | AYVLKDAIDNFWEAPVQGGLAFQKQYFDMHYDIETTAKQWEMMLSTIKSNLEKKS* |
Ga0181367_10485012 | 3300017703 | Marine | RGLAFQKQYYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS |
Ga0181430_10465011 | 3300017772 | Seawater | PPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0181432_11539582 | 3300017775 | Seawater | AYVLKDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNLEKTP |
Ga0211679_10169413 | 3300020263 | Marine | DAIGSFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK |
Ga0211634_10855901 | 3300020279 | Marine | YVLKDAIDNFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWTLMLETIKNSLEKKS |
Ga0211698_10694131 | 3300020290 | Marine | GLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0211570_11337952 | 3300020344 | Marine | FWEPPVQAGLAFQKQYYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS |
Ga0211477_102927392 | 3300020374 | Marine | QAGLGFQKQYFDMHYDIETTAKQWEMMLQTIKNNIERSKEQKS |
Ga0211564_105166542 | 3300020445 | Marine | APVQGGLAVQKQYFDMHYDIETTAKQWEMMLSTIKSNLKKNNE |
Ga0206684_12629582 | 3300021068 | Seawater | PVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0206677_101618491 | 3300021085 | Seawater | AYVLKDAIDNFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWSLMLETIKTSLEKKS |
Ga0206679_105017862 | 3300021089 | Seawater | FQKQYFDMHYDIETTARQWTMMLETIKGNIEKIKEKKS |
Ga0206680_101397133 | 3300021352 | Seawater | AYVLKDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0206690_100536212 | 3300021355 | Seawater | VLKDAINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0213858_100608114 | 3300021356 | Seawater | SVQAGLGFQKQYFDMHYDIETTAKQWEMMLQTIKNNIERSKEQKS |
Ga0226832_101231261 | 3300021791 | Hydrothermal Vent Fluids | DAIDNFWEAPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNLEKKS |
Ga0226832_104152652 | 3300021791 | Hydrothermal Vent Fluids | FQKQYYDMHYDIETTARQWTMMLETIRGNIENTKEKKS |
(restricted) Ga0233435_11627642 | 3300024252 | Seawater | KDAINNFWEPPVQSGLAFQKQYYDMHYDIETTAKQWIMMLETIKNNIENTKEKKS |
(restricted) Ga0233445_11225273 | 3300024339 | Seawater | VQTGLAFQKQYYDMHYDIETTAKQWIMMLETIKNNIENTKEKKS |
Ga0208668_10207901 | 3300025078 | Marine | DAIDNFWEAPVQGGLAFQKQYFDMHYDIETTAKQWEMMLSTIKSNLEKKS |
Ga0208298_10285073 | 3300025084 | Marine | PVQAGLAFQKQYYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS |
Ga0208553_11084882 | 3300025109 | Marine | LAFQKQYFDMHYDIETTARQWTMMLETIKGNIEKTKEKKS |
Ga0208837_10389522 | 3300025234 | Deep Ocean | AFQKQYYDMHYDIETTAKQWTMMLETIKNNIEKTKEKKS |
Ga0208880_10969971 | 3300026085 | Marine | KQYFDMHYDIDTTAKQWEMMLQTIKNNIERSKEQKS |
Ga0207986_10697862 | 3300026192 | Marine | FWKPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKENIERSKEKKS |
Ga0208642_10861822 | 3300026210 | Marine | TFQKQYFDMHYDIDTTAKQWIMMLETIKTNIEYSKQKK |
Ga0208764_103737022 | 3300026321 | Marine | QKQYYDMHYDIDTTAKQWTMMLETIKNNIENTKEKKS |
Ga0209019_10577312 | 3300027677 | Marine | EPPVQARLTFQKQYFDMHYDIDTTAKQWIMMLETIKTNIEYSKQKK |
Ga0209752_10653111 | 3300027699 | Marine | WEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0209192_102995111 | 3300027752 | Marine | VLKDAIESFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLGTIKSNLEYSKQKK |
Ga0209711_103062551 | 3300027788 | Marine | DSFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLGTIKTNLEYSKQKK |
Ga0209404_100662535 | 3300027906 | Marine | IDNFWEAPVQGGLAVQKQYFDMHYDIETTAKQWEMMLSTIKSNLEKKS |
Ga0257108_10989623 | 3300028190 | Marine | VQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0257109_11558001 | 3300028487 | Marine | QAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0257112_101544011 | 3300028489 | Marine | DAIDSFWEPPVQARLAFQKQYFDMHYDIDTTAKQWTMMLETIKTNIEYSKQKK |
Ga0257112_102720451 | 3300028489 | Marine | RDAIDSFWEPPVQARLAFQKQYFDMHYDIDTTAKKWTMMLETIKTNIEYSKQKK |
Ga0257112_102721351 | 3300028489 | Marine | AINNFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0308025_12334191 | 3300031143 | Marine | GSFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK |
Ga0308019_101315213 | 3300031598 | Marine | KQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK |
Ga0302119_101836321 | 3300031606 | Marine | DAIENFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0308011_101664071 | 3300031688 | Marine | IGSFWEPPVQAGLAFQKQYFDMHYDIDTTAKQWEMMLETIKTNIEYSKQKK |
Ga0302120_103219051 | 3300031701 | Marine | NFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0315322_100660751 | 3300031766 | Seawater | SYVLKDAIDSFWEAPVQAGLGFQKQYFDMHYDIDTTAKQWEMMLETIKSNIEYSKQKK |
Ga0310122_102307261 | 3300031800 | Marine | AIENFWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKENIEKTKEKKS |
Ga0315329_102076581 | 3300032048 | Seawater | QKQYYDMHYDIETTAKQWTMMLETIKNNIENTKDKKS |
Ga0315333_101313953 | 3300032130 | Seawater | QYYDMHYDIETTAKQWTMMLETIKNNIENTKKKKS |
Ga0315333_102594381 | 3300032130 | Seawater | FWEPPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKEKKS |
Ga0310345_113408282 | 3300032278 | Seawater | KDAIDNFWEAPVQAGLAFQKQYFDMHYDIDTTAKQWTMMLETIKTSLEKKS |
Ga0315334_118680791 | 3300032360 | Seawater | LAFQKQYFDMHYDIETTAKQWEMMLETIKNNLEKKSES |
Ga0372840_240358_392_535 | 3300034695 | Seawater | PPVQAGLAFQKQYYDMHYDIETTAKQWTMMLETIKNNIENTKDKKSQ |
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