Metagenome / Metatranscriptome Family F097951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097951
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	LNVPGRQRHSRRAQKARPKFPHATATKTTVTGKPQVTVFAPGFC
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.192 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 11.11% Coil/Unstructured: 88.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF12770	CHAT	1.92
PF13613	HTH_Tnp_4	1.92
PF01548	DEDD_Tnp_IS110	1.92
PF13676	TIR_2	1.92
PF02371	Transposase_20	1.92
PF00415	RCC1	0.96
PF07040	DUF1326	0.96
PF13542	HTH_Tnp_ISL3	0.96
PF04116	FA_hydroxylase	0.96
PF13374	TPR_10	0.96
PF11716	MDMPI_N	0.96
PF00498	FHA	0.96
PF13607	Succ_CoA_lig	0.96
PF00144	Beta-lactamase	0.96
PF13398	Peptidase_M50B	0.96
PF13006	Nterm_IS4	0.96
PF14338	Mrr_N	0.96
PF08388	GIIM	0.96
PF01243	Putative_PNPOx	0.96
PF05977	MFS_3	0.96
PF01924	HypD	0.96
PF00583	Acetyltransf_1	0.96
PF02909	TetR_C_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.85
COG5184	Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins	Cell cycle control, cell division, chromosome partitioning [D]	1.92
COG0409	Hydrogenase maturation factor HypD	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.96
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.96
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.96
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.96
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.88 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.92 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.92 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.92 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Micromonospora deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora deserti	0.96 %
Frankia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	0.96 %
Nonomuraea cypriaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	0.96 %
Frankia casuarinae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia casuarinae	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573003\|GZIR7W401CUYXQ	Not Available	547	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100608119	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300005471\|Ga0070698_100620920	Not Available	1022	Open in IMG/M
3300005537\|Ga0070730_10991916	Not Available	524	Open in IMG/M
3300006102\|Ga0075015_100629154	Not Available	631	Open in IMG/M
3300006173\|Ga0070716_100032267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2855	Open in IMG/M
3300006804\|Ga0079221_10185893	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300006804\|Ga0079221_11040364	Not Available	619	Open in IMG/M
3300006854\|Ga0075425_100045422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4908	Open in IMG/M
3300006954\|Ga0079219_10251307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1052	Open in IMG/M
3300009029\|Ga0066793_10394823	Not Available	795	Open in IMG/M
3300009038\|Ga0099829_11681119	Not Available	522	Open in IMG/M
3300009089\|Ga0099828_11260902	Not Available	655	Open in IMG/M
3300009089\|Ga0099828_11747940	Not Available	547	Open in IMG/M
3300009090\|Ga0099827_11451973	Not Available	597	Open in IMG/M
3300009090\|Ga0099827_11914436	Not Available	517	Open in IMG/M
3300009520\|Ga0116214_1145658	All Organisms → cellular organisms → Bacteria → Terrabacteria group	881	Open in IMG/M
3300009521\|Ga0116222_1154889	Not Available	986	Open in IMG/M
3300009521\|Ga0116222_1520757	Not Available	521	Open in IMG/M
3300009698\|Ga0116216_10295012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	988	Open in IMG/M
3300009698\|Ga0116216_10394150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300009700\|Ga0116217_11036527	Not Available	502	Open in IMG/M
3300009824\|Ga0116219_10042873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2697	Open in IMG/M
3300009824\|Ga0116219_10266831	Not Available	969	Open in IMG/M
3300009824\|Ga0116219_10704449	Not Available	552	Open in IMG/M
3300009839\|Ga0116223_10674473	Not Available	594	Open in IMG/M
3300010329\|Ga0134111_10481346	Not Available	542	Open in IMG/M
3300010341\|Ga0074045_10080040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2289	Open in IMG/M
3300010343\|Ga0074044_10681773	Not Available	671	Open in IMG/M
3300010379\|Ga0136449_103263871	Not Available	625	Open in IMG/M
3300010379\|Ga0136449_103920476	Not Available	557	Open in IMG/M
3300011269\|Ga0137392_10430843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1095	Open in IMG/M
3300011271\|Ga0137393_11262966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	626	Open in IMG/M
3300012189\|Ga0137388_10758943	Not Available	900	Open in IMG/M
3300012199\|Ga0137383_11253936	Not Available	530	Open in IMG/M
3300012201\|Ga0137365_10896789	Not Available	647	Open in IMG/M
3300012207\|Ga0137381_10103448	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300012207\|Ga0137381_10602780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300012210\|Ga0137378_10533014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300012354\|Ga0137366_10634354	Not Available	765	Open in IMG/M
3300012357\|Ga0137384_10360075	Not Available	1205	Open in IMG/M
3300012357\|Ga0137384_11285253	Not Available	578	Open in IMG/M
3300012361\|Ga0137360_10477032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1059	Open in IMG/M
3300012361\|Ga0137360_11306885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	626	Open in IMG/M
3300014501\|Ga0182024_10223991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2546	Open in IMG/M
3300017924\|Ga0187820_1335192	Not Available	503	Open in IMG/M
3300017943\|Ga0187819_10677522	Not Available	582	Open in IMG/M
3300017955\|Ga0187817_10189419	Not Available	1310	Open in IMG/M
3300017995\|Ga0187816_10529641	Not Available	531	Open in IMG/M
3300018007\|Ga0187805_10494610	Not Available	573	Open in IMG/M
3300018032\|Ga0187788_10562559	Not Available	500	Open in IMG/M
3300018058\|Ga0187766_10998067	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M
3300018433\|Ga0066667_11474462	Not Available	600	Open in IMG/M
3300018468\|Ga0066662_11893518	Not Available	624	Open in IMG/M
3300021420\|Ga0210394_11319487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300025928\|Ga0207700_11100146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300025983\|Ga0210106_1081224	Not Available	536	Open in IMG/M
3300026294\|Ga0209839_10032593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1965	Open in IMG/M
3300026309\|Ga0209055_1300586	Not Available	505	Open in IMG/M
3300026469\|Ga0257169_1037240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	741	Open in IMG/M
3300027854\|Ga0209517_10256626	Not Available	1043	Open in IMG/M
3300027903\|Ga0209488_10738680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300027905\|Ga0209415_10269876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia casuarinae	1505	Open in IMG/M
3300028787\|Ga0307323_10287380	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028879\|Ga0302229_10130430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172	Open in IMG/M
3300030058\|Ga0302179_10097881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	1298	Open in IMG/M
3300030494\|Ga0310037_10033039	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300030494\|Ga0310037_10157693	Not Available	1026	Open in IMG/M
3300030706\|Ga0310039_10058201	Not Available	1694	Open in IMG/M
3300030707\|Ga0310038_10005900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8515	Open in IMG/M
3300030718\|Ga0307919_1059392	Not Available	531	Open in IMG/M
3300031231\|Ga0170824_121809497	Not Available	590	Open in IMG/M
3300031544\|Ga0318534_10213122	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031680\|Ga0318574_10438779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300031680\|Ga0318574_10810845	Not Available	548	Open in IMG/M
3300031708\|Ga0310686_106427167	Not Available	628	Open in IMG/M
3300031723\|Ga0318493_10350002	Not Available	803	Open in IMG/M
3300031782\|Ga0318552_10640945	Not Available	542	Open in IMG/M
3300031819\|Ga0318568_10666868	Not Available	647	Open in IMG/M
3300031831\|Ga0318564_10112621	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1211	Open in IMG/M
3300031835\|Ga0318517_10344149	Not Available	674	Open in IMG/M
3300031846\|Ga0318512_10454126	Not Available	647	Open in IMG/M
3300031893\|Ga0318536_10561803	Not Available	572	Open in IMG/M
3300031897\|Ga0318520_10374391	Not Available	867	Open in IMG/M
3300031897\|Ga0318520_11110980	Not Available	501	Open in IMG/M
3300031946\|Ga0310910_11580827	Not Available	502	Open in IMG/M
3300032001\|Ga0306922_11302693	Not Available	735	Open in IMG/M
3300032009\|Ga0318563_10637695	Not Available	574	Open in IMG/M
3300032054\|Ga0318570_10285881	Not Available	749	Open in IMG/M
3300032066\|Ga0318514_10325902	Not Available	813	Open in IMG/M
3300032076\|Ga0306924_11335260	Not Available	768	Open in IMG/M
3300032160\|Ga0311301_12826038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	529	Open in IMG/M
3300032160\|Ga0311301_13062116	Not Available	500	Open in IMG/M
3300032770\|Ga0335085_10203935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2419	Open in IMG/M
3300032805\|Ga0335078_10191726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2848	Open in IMG/M
3300032828\|Ga0335080_11744394	Not Available	609	Open in IMG/M
3300032892\|Ga0335081_10717009	Not Available	1210	Open in IMG/M
3300032893\|Ga0335069_11444489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora deserti	742	Open in IMG/M
3300032896\|Ga0335075_10005074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20495	Open in IMG/M
3300032898\|Ga0335072_10228261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2168	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	6.73%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Peat	Environmental → Terrestrial → Peat	2.88%
Marine	Environmental → Aquatic → Marine	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.81%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Clay	Environmental → Terrestrial → Soil → Clay	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	20.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025983	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030718	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - OX-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE2_08008870	2189573003	Grass Soil	PGRQRHSERAQKARPKFPHASATKTTVTGKPKVTVFAPGSC
INPhiseqgaiiFebDRAFT_1006081192	3300000364	Soil	RAALRTLNITGRQRHSRRAQKARPKFAHTSATKTTVTGKPQVIVYAPGFT*
Ga0070698_1006209202	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TLNVPGRERHSDRAQKARPKFRHTAVTKPTVTGKPQVTVFAPGFS*
Ga0070730_109919161	3300005537	Surface Soil	ARACLHTLNLPGRQRHSERAQKARPKFPHATATKITVTGKPQVTVFAPGFC*
Ga0066703_106548382	3300005568	Soil	PRVQKARPKFGHTSATKKTVTGKHQVIVYAPGRC*
Ga0075015_1006291542	3300006102	Watersheds	LPGRQRHSKRAQKARPKFPYATATKTTVTGKPQVTVFAPGFS*
Ga0070716_1000322671	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RAALHILNVPGRQRHSERAQKARPKFRHATATKQTVTGKPQVTAFAPGFS*
Ga0079221_101858931	3300006804	Agricultural Soil	ILNVPGRQRHSERAQKARPKFRHATATKQTVTGKPQVTAFAPGFS*
Ga0079221_110403641	3300006804	Agricultural Soil	IPGRERHSPRVQKARPKFGHTSATKKTVTGKHQVIVHAPGRC*
Ga0075425_1000454221	3300006854	Populus Rhizosphere	NIPGRQRHSERAQKARPKFRHTTATKRTVTGKPQVTVFAPGFS*
Ga0079219_102513071	3300006954	Agricultural Soil	LHTLNLPGRQRHSERAQKARLKFPHVTATKTTVTGKPQVTVFAPGFY*
Ga0066793_103948231	3300009029	Prmafrost Soil	LHTLNIPGRQRHSKRAQKARPKFPHATATKQTVTGKPQVTVFAPGFC*
Ga0099829_116811191	3300009038	Vadose Zone Soil	IPGRQRHSRRAQKARPKFPHAAATKVTVTGKPQVTVFAPGFS*
Ga0099828_112609021	3300009089	Vadose Zone Soil	LPARQRHSRRAQKARPKFPHATATKTTITGKPQVTVFAPGFY*
Ga0099828_117479403	3300009089	Vadose Zone Soil	LRTLNVPGRQRHSRRAQKARPKFPHTAVTKPTVTGKPRVTVFAPGYT*
Ga0099827_114519731	3300009090	Vadose Zone Soil	LNIPGRQRHSKRAQKARPKFRHATATKNTVTCKPQVTVFAPGFS*
Ga0099827_119144361	3300009090	Vadose Zone Soil	SKRAQKARPKFAHASATKQTDTRKPQARVFAPGFS*
Ga0116214_11456581	3300009520	Peatlands Soil	LNVPGRQRHSRRAQKARPKFPHATATKTTVTGKPQVTVFAPGFC*
Ga0116222_11548891	3300009521	Peatlands Soil	HTLSLPGRQRHSKRAQKARPKFPHATATKTTVTGKPQVTVFAPGFS*
Ga0116222_15207571	3300009521	Peatlands Soil	PGRQRHSKPAKKTRPKFPHSTATKTTVTGKPQVTVFAPGFC*
Ga0116216_102950122	3300009698	Peatlands Soil	VPGRQRHSERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS*
Ga0116216_103941502	3300009698	Peatlands Soil	KRAQKARPKFPHATGTKTTVTGKPQVTVFAPGYC*
Ga0116217_109329291	3300009700	Peatlands Soil	SKRAQKARPKFAHTSATKKTVTGKPQVTVYAPGFS*
Ga0116217_110365271	3300009700	Peatlands Soil	GRQRHSERAQKARPKFPHATATKTTITGKPQVTVFAPGSY*
Ga0116219_100428731	3300009824	Peatlands Soil	LNVPGRQRHSRRAQKARPKFPHATATKTTVTGKPQVTVFAPGSC*
Ga0116219_102668311	3300009824	Peatlands Soil	LHTLNLPGRQRHSARAQKASPKFPHATATKTTATGKPQVTVFAPGRC*
Ga0116219_107044491	3300009824	Peatlands Soil	AALHTLNVPGRQRHSERARKARPKFPHATATKTTVTGKPQVTVFAPGSC*
Ga0116223_106744732	3300009839	Peatlands Soil	HSRRAQKARPKFPHATATKTTVTGKPQVTVFAPGFY*
Ga0134111_104813461	3300010329	Grasslands Soil	LNLPGRQRHSEWAQKARPKFPHASATKITLTGKPQVTVFAPGFY*
Ga0074045_100800401	3300010341	Bog Forest Soil	SRRAQKARPKFPHASATKTTVTGKPQVTVFAPGFC*
Ga0074044_106817731	3300010343	Bog Forest Soil	LSIPGRQRHSRRAQKARPKFPHAAATKVTVTGKPQVTVFAPGFS*
Ga0136449_1032638711	3300010379	Peatlands Soil	SLPGRQRHSKRAQKARPKFPHATATKTTATGKPQVTVFAPGFS*
Ga0136449_1039204761	3300010379	Peatlands Soil	GRQRHSKRAQKARPKFPHASATKTTVTGKPQVQVFVPGFS*
Ga0137392_104308431	3300011269	Vadose Zone Soil	LNLPARQRHSRRAQKARPKFPHATATKTTITGKPQVTVFAPGFY*
Ga0137393_112629662	3300011271	Vadose Zone Soil	RHSQRAQKARPKFGHTAATKQTVTGKPEVTVFAPGFS*
Ga0137388_107589431	3300012189	Vadose Zone Soil	KRAQKASPKFRHATATRQPITGKPRVTVFAPGFP*
Ga0137383_112539362	3300012199	Vadose Zone Soil	AHLHTLNIPGRDRHSPRTQKAGPNFPHTPATKQTVTGKYQVIVYAPGHR*
Ga0137365_108967892	3300012201	Vadose Zone Soil	ARACLHTLNIPGRERHSPRVQKARPKFGHTSATKTTLTGKHEVIVYAPGRC*
Ga0137381_101034483	3300012207	Vadose Zone Soil	GRQRRSRRAQKARPKFGHTAATKNTVTGKPEVTVFIPGSS*
Ga0137381_106027801	3300012207	Vadose Zone Soil	TLNIPGRERHSPRVQKARPKFGHTSATKTTLTGKHEVIVYAPGRC*
Ga0137378_105330142	3300012210	Vadose Zone Soil	AALHTLNLPRRQRHSTRAQKARPKFPHATATKTTVTGKPQVTVFAPGFY*
Ga0137366_106343543	3300012354	Vadose Zone Soil	RHSKRAQKARPKFPHATGTKTTFTGKPQVTVFAPGFC*
Ga0137384_103600751	3300012357	Vadose Zone Soil	RAILRTLNIPGRQRHSERKQKARPKFPHTAATKHTVTGKPRVTVFAPGFS*
Ga0137384_112852531	3300012357	Vadose Zone Soil	RRSQRAQKARPKFRHTAATKQTITGKPRVTIFTPSAG*
Ga0137360_104770321	3300012361	Vadose Zone Soil	RAALHSLNVPARQRHSKRAQKARPKFGHTSATKKTVTGKPQVQVFAPGFS*
Ga0137360_113068851	3300012361	Vadose Zone Soil	GRQRHSERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS*
Ga0182024_102239911	3300014501	Permafrost	SQRAQKARPKFAHTSATKTTVTGKPQVTVFVPGAG*
Ga0187820_13351922	3300017924	Freshwater Sediment	HTLNVPGRQRHSERAQKARPKFPHATATKTTITGKPRVTVFAPGFC
Ga0187819_106775221	3300017943	Freshwater Sediment	RQRHSERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS
Ga0187817_101894192	3300017955	Freshwater Sediment	AAARAMLHTLNVPGRQRHAQRAQKARPKFAHTPATKTTITGKPQVTVFAPGFC
Ga0187816_105296411	3300017995	Freshwater Sediment	RAALHTLNIPGRQRHSERAQKARPKFRHATATKQTITGKPQVTVFAPGFS
Ga0187805_104946101	3300018007	Freshwater Sediment	LNLPGRQRHSERAQKARPKFPHASATKITVTGKPQVTVFAPGFC
Ga0187788_105625591	3300018032	Tropical Peatland	ARAALHTLSLPQRQRHSARAQKARPKFPHVTATKTTVTGNPQVTVFAPGFY
Ga0187766_109980671	3300018058	Tropical Peatland	LNIPGRQRHSKRAQKARPKFPHATATKTTVTGKPQVQVFAPGFS
Ga0066667_114744621	3300018433	Grasslands Soil	LHTLNVPGRQRHSERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS
Ga0066662_118935181	3300018468	Grasslands Soil	TLNVPGRQRHSGRAQKARPKFPHTAATKPTVTGKPQVTVFTPGFS
Ga0210394_113194872	3300021420	Soil	SRAAMHSLNVPGRQRHSQRAQKARPIFAHASATKQTATGKPEVTVFAPGSS
Ga0207700_111001461	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	NLPGRQRHSERAQKARLKFPHATATKTTTTGKPQLTVFAPGLC
Ga0210106_10812241	3300025983	Natural And Restored Wetlands	AARAALHTLNVPGRQRHSERAQKARPKFRHATATKTTVTGKPEVRVFAPGFY
Ga0209839_100325931	3300026294	Soil	AAARAALHTLNVPGRQRHSERAQKARLKFPHATATKATVTGKPQVTVFAPGSC
Ga0209055_13005862	3300026309	Soil	ILHTLNLPGRQRHSERAQKARPKFPHASATKTTVTGKPQVTVFAPGFY
Ga0257169_10372401	3300026469	Soil	ARAALHALNVPGRQRHSERAQKARPKFPHATATKTTVTGKPQVTVFAPGSC
Ga0209517_102566261	3300027854	Peatlands Soil	RSERAQKARPKFPHATATKTTVTGKPQVTVFAPGFY
Ga0209488_107386801	3300027903	Vadose Zone Soil	TLNVPGRQRHSKRAQKARPKFPHATATKPTITGKPRVTVFAPGFC
Ga0209415_102698762	3300027905	Peatlands Soil	HTLNIPGRQRHSKRAQKARPKFPHAFATKTTVTGKPQVTVFAPGFC
Ga0302151_102949031	3300028562	Bog	HSPREQKARPKFPHTSATKQTATGKYQVIVYAPGRC
Ga0307323_102873801	3300028787	Soil	RQRHSERAQKARPKFPHATATKTTVTGKPQVTVFAPGFY
Ga0302229_101304302	3300028879	Palsa	PRAALHTLSVPGRQWHSRRAQKARPKFPPATATKVTVTGKPQVTVFASGFS
Ga0302179_100978811	3300030058	Palsa	HSRRAQKACPKFPHATATKATVTGKPQVTVFAPGFS
Ga0310037_100330395	3300030494	Peatlands Soil	SKRAQKARPKFPHATATKTTVTGKPQVTVFAPGSC
Ga0310037_101576931	3300030494	Peatlands Soil	PGRQRHSKRTQKARPKFPHATATKATITGKPQVTVFAPGFC
Ga0310039_100582013	3300030706	Peatlands Soil	RRSERAQKARPKFPHATATKTTVTGKPQVTVFAPGFY
Ga0310038_100059006	3300030707	Peatlands Soil	QRHSERARKARPKFPHATATKTTVTGKPQVTVFAPGFC
Ga0307919_10593921	3300030718	Soil	LNLPGRQRHSERAQKASPKFPHATATKTTITGKPQVTVYAPGSC
Ga0170824_1218094971	3300031231	Forest Soil	HSERAQKVRPKFRHATATKQTVTGKPQVTVFAPGFS
Ga0318534_102131221	3300031544	Soil	DCLHTLSLPGRQRHSTRAQKARPKFPHASTTKTTVTGKPQVTVFAPGFS
Ga0318574_104387791	3300031680	Soil	RAALHTLNIPGRERHSERAQKAHPKFPHASATKTTVTGKPQVTVFAPGFS
Ga0318574_108108452	3300031680	Soil	HLHTLNIPGRDRHSPRQQKARPKFPHTSATKQTLTGKYQVIAYAPGRR
Ga0318572_106359062	3300031681	Soil	NIPGRDRHSPRQQKARPKFPHTSATKQTLTGKYQVIAYAPGRR
Ga0310686_1064271671	3300031708	Soil	ALNIPGRQRHSKRAQKARPKFPHATATKATITGKPQVTVFAPGFY
Ga0318493_103500021	3300031723	Soil	LHTLNIPGRDRHSPRQQKARPKFPHTSATKQTLTGKYQVIAYAPGRR
Ga0318552_106409452	3300031782	Soil	ALHVLNVPGRQRHSRRAQKARPKFPHATGTKTTVTGKPQVTVFAPGFY
Ga0318568_106668681	3300031819	Soil	RHSRRAQKARPKFPHATGTKTTVTGKPQVTVFAPGFY
Ga0318564_101126211	3300031831	Soil	LHTLHVPGRQRHSKRAQKARPKFPHAIATKTTVTGKPQVQVFAPGFS
Ga0318517_103441491	3300031835	Soil	RAHLHTLNIPGRDRHSPRQQKARPKFPHTSATKQTLTGKYQVIAYAPGRR
Ga0318512_104541261	3300031846	Soil	RAALHTLNVYGRERHSKRVQKARPKFAHASMTKQTVTGKPQVTVFAPGYS
Ga0318536_105618031	3300031893	Soil	SKRGQKARPNFPHATATKTTVTGKPQVTVFAPGFY
Ga0318520_103743912	3300031897	Soil	SAAAARAHLHTLNIPGRDRHSPRQQKARPKFPHTSATKQTLTGKYQVIAYAPGRR
Ga0318520_111109801	3300031897	Soil	HTLNIPGRERHSERAQKAHPKFPHASATKTTVTGKPQVTVFAPGFS
Ga0310910_115808271	3300031946	Soil	AALHVLNIPGRQRHSRRAQKARPKFPHATGTKTTVTGKPQVTVFAPGFY
Ga0306922_113026931	3300032001	Soil	AALHTLNIPGRQRHSERAQKARPKFAHTSATKTTVTGKPQVNVYAPGFS
Ga0318563_106376952	3300032009	Soil	TLNVPGRQRHSERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS
Ga0318570_102858812	3300032054	Soil	ARAALHTLNIPGRERHSERAQKAHPKFPHASATKTTVTGKPQVTVFAPGFS
Ga0318514_103259023	3300032066	Soil	LNLPGRHRHSGRTQKARPKFPHATATKTTATGKPQVTVFAPGFR
Ga0306924_113352601	3300032076	Soil	SERAQKARPKFRHATATKQTVTGKPQVTVFAPGFS
Ga0311301_128260382	3300032160	Peatlands Soil	GRERHSQRAQKARPKFRHTAATKQTVTGKPHVTVFAPDTR
Ga0311301_130621161	3300032160	Peatlands Soil	HSKRAQKARPKFAHASATKQTVTGKPQVTVFAPGFS
Ga0335085_102039353	3300032770	Soil	AHAERPGRERHSQRAQKARPKFPHAAATKQTVTGKPQVTVFAPGFS
Ga0335078_101917261	3300032805	Soil	RAALHTLNLPDRQRHSKRAQKARPKFPHAPASKTTVTGKPQVTVFAPGFY
Ga0335080_117443942	3300032828	Soil	RQRHSKRAQKARPKFPHATATKTTVTGKPKVTVFAPGFS
Ga0335081_107170091	3300032892	Soil	ARAHLHALNIPGRNRHSPREQKARPKFPHTSATKPTVTRKYEVIVYAPGRH
Ga0335069_114444892	3300032893	Soil	AARASLHTLNLPGRQRHSERAQKARPRFPHASATKITVTGKPQVTVFAPGLC
Ga0335075_100050741	3300032896	Soil	RTLNIPGRRRHSERAQKARPKFPHATATKPTVTGKPQVTVFASGFS
Ga0335072_102282611	3300032898	Soil	LNIPGRRRHSERAQKARPKFPHATATKPTVTGKPQVTVFAPGFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences